NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F103181

Metagenome Family F103181

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F103181
Family Type Metagenome
Number of Sequences 101
Average Sequence Length 70 residues
Representative Sequence MVTAPEEKDDDEPRYTAWLDLPISTREPMTAKDANAARKALLALDDRTPQQRLLGEPPTWRSALAQRNR
Number of Associated Samples 80
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 89.11 %
% of genes near scaffold ends (potentially truncated) 17.82 %
% of genes from short scaffolds (< 2000 bps) 81.19 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (96.040 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Clay → Unclassified → Soil
(12.871 % of family members)
Environment Ontology (ENVO) Unclassified
(30.693 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(37.624 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 37.11%    β-sheet: 0.00%    Coil/Unstructured: 62.89%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF13610DDE_Tnp_IS240 1.98
PF01741MscL 1.98
PF00248Aldo_ket_red 1.98
PF01925TauE 0.99
PF00106adh_short 0.99
PF08238Sel1 0.99
PF06080DUF938 0.99
PF03797Autotransporter 0.99
PF00275EPSP_synthase 0.99
PF00107ADH_zinc_N 0.99
PF00902TatC 0.99
PF06742DUF1214 0.99
PF00440TetR_N 0.99
PF16658RF3_C 0.99
PF03454MoeA_C 0.99
PF01494FAD_binding_3 0.99
PF02806Alpha-amylase_C 0.99
PF04964Flp_Fap 0.99
PF13751DDE_Tnp_1_6 0.99
PF05099TerB 0.99
PF02518HATPase_c 0.99
PF00753Lactamase_B 0.99
PF13676TIR_2 0.99
PF00884Sulfatase 0.99
PF02834LigT_PEase 0.99
PF01968Hydantoinase_A 0.99
PF13148DUF3987 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 1.98
COG1970Large-conductance mechanosensitive channelCell wall/membrane/envelope biogenesis [M] 1.98
COG02961,4-alpha-glucan branching enzymeCarbohydrate transport and metabolism [G] 0.99
COG0303Molybdopterin Mo-transferase (molybdopterin biosynthesis)Coenzyme transport and metabolism [H] 0.99
COG0366Glycosidase/amylase (phosphorylase)Carbohydrate transport and metabolism [G] 0.99
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.99
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 0.99
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 0.99
COG0730Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 familyInorganic ion transport and metabolism [P] 0.99
COG0805Twin-arginine protein secretion pathway component TatCIntracellular trafficking, secretion, and vesicular transport [U] 0.99
COG1514RNA 2',3'-cyclic phosphodiesterase (2'-5' RNA ligase)Translation, ribosomal structure and biogenesis [J] 0.99
COG1523Pullulanase/glycogen debranching enzymeCarbohydrate transport and metabolism [G] 0.99
COG3793Tellurite resistance protein TerBInorganic ion transport and metabolism [P] 0.99
COG3847Flp pilus assembly protein, pilin FlpExtracellular structures [W] 0.99
COG5361Uncharacterized conserved proteinMobilome: prophages, transposons [X] 0.99
COG5402Uncharacterized protein, contains DUF1214 domainFunction unknown [S] 0.99

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.04 %
UnclassifiedrootN/A3.96 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003988|Ga0055475_10104567All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis860Open in IMG/M
3300004003|Ga0055445_10099091All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis942Open in IMG/M
3300004006|Ga0055453_10014480All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis1849Open in IMG/M
3300004030|Ga0055444_10341501All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis582Open in IMG/M
3300004064|Ga0055479_10277184All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis627Open in IMG/M
3300004145|Ga0055489_10168241All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis670Open in IMG/M
3300004479|Ga0062595_100303142All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1078Open in IMG/M
3300004479|Ga0062595_101953558All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis564Open in IMG/M
3300005215|Ga0069001_10132780All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis667Open in IMG/M
3300005338|Ga0068868_101360509All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis661Open in IMG/M
3300005439|Ga0070711_100505730All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis997Open in IMG/M
3300005455|Ga0070663_100399827All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1123Open in IMG/M
3300005526|Ga0073909_10682249All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis514Open in IMG/M
3300005530|Ga0070679_102125465All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis511Open in IMG/M
3300005616|Ga0068852_101614221All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis671Open in IMG/M
3300005841|Ga0068863_101101227All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis799Open in IMG/M
3300006636|Ga0075525_10015659All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1579Open in IMG/M
3300006636|Ga0075525_10019110All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes1406Open in IMG/M
3300006792|Ga0075530_1028163Not Available2081Open in IMG/M
3300006792|Ga0075530_1059417All Organisms → cellular organisms → Bacteria1316Open in IMG/M
3300008470|Ga0115371_11323738All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis1975Open in IMG/M
3300009053|Ga0105095_10654142All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis586Open in IMG/M
3300009146|Ga0105091_10564018All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis584Open in IMG/M
3300009149|Ga0114918_10119674All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter1607Open in IMG/M
3300009149|Ga0114918_10412058All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis735Open in IMG/M
3300009150|Ga0114921_10249142All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis1254Open in IMG/M
3300009166|Ga0105100_10723829All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria614Open in IMG/M
3300009177|Ga0105248_11201496All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis857Open in IMG/M
3300009177|Ga0105248_12555161All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis582Open in IMG/M
3300009528|Ga0114920_11247674All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis509Open in IMG/M
3300009529|Ga0114919_10355913All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens1022Open in IMG/M
3300009551|Ga0105238_11876802All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis632Open in IMG/M
3300010401|Ga0134121_12634092All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis547Open in IMG/M
3300011118|Ga0114922_10604345All Organisms → cellular organisms → Bacteria903Open in IMG/M
3300012955|Ga0164298_10195704All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella → Legionella israelensis1177Open in IMG/M
3300012957|Ga0164303_10092752Not Available1474Open in IMG/M
3300012960|Ga0164301_10510168All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella → Legionella israelensis869Open in IMG/M
3300012961|Ga0164302_10040328All Organisms → cellular organisms → Bacteria → Proteobacteria2233Open in IMG/M
3300012964|Ga0153916_11134937All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis861Open in IMG/M
3300012985|Ga0164308_12285903All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis503Open in IMG/M
3300013297|Ga0157378_12043747All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis623Open in IMG/M
3300014320|Ga0075342_1027757All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis1318Open in IMG/M
3300014320|Ga0075342_1055791All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis971Open in IMG/M
3300015371|Ga0132258_11552688All Organisms → cellular organisms → Bacteria → Proteobacteria1671Open in IMG/M
3300024262|Ga0210003_1000003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi501739Open in IMG/M
3300024262|Ga0210003_1037992All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae2594Open in IMG/M
3300024263|Ga0209978_10528526All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis559Open in IMG/M
3300024353|Ga0209979_1237631All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis616Open in IMG/M
3300024433|Ga0209986_10110543All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis1475Open in IMG/M
3300025582|Ga0209386_1011392All Organisms → cellular organisms → Bacteria → Proteobacteria1802Open in IMG/M
3300025582|Ga0209386_1014607All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis1546Open in IMG/M
3300025721|Ga0209587_1003234All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria6869Open in IMG/M
3300025721|Ga0209587_1016715Not Available2289Open in IMG/M
3300025946|Ga0210126_127034All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis542Open in IMG/M
3300025960|Ga0207651_10602643All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis960Open in IMG/M
3300026035|Ga0207703_11169029All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis739Open in IMG/M
3300026067|Ga0207678_10437737All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1135Open in IMG/M
3300026089|Ga0207648_10398518All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis1247Open in IMG/M
3300026118|Ga0207675_100522351All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1184Open in IMG/M
(restricted) 3300027872|Ga0255058_10370108All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis694Open in IMG/M
(restricted) 3300027997|Ga0255057_10066364All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter1736Open in IMG/M
(restricted) 3300027997|Ga0255057_10351383All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis715Open in IMG/M
3300031152|Ga0307501_10183977All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis588Open in IMG/M
3300031228|Ga0299914_10518426All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis1028Open in IMG/M
3300031229|Ga0299913_10732981All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis965Open in IMG/M
3300031256|Ga0315556_1030778All Organisms → cellular organisms → Bacteria → Proteobacteria2320Open in IMG/M
3300031358|Ga0307438_1054311All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis1329Open in IMG/M
3300031359|Ga0307426_1277749All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis541Open in IMG/M
3300031360|Ga0307444_1055493All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis1293Open in IMG/M
3300031537|Ga0307419_10262876All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis620Open in IMG/M
3300031539|Ga0307380_10005685All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi16518Open in IMG/M
3300031539|Ga0307380_10050187All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4604Open in IMG/M
3300031539|Ga0307380_10050228All Organisms → cellular organisms → Bacteria4602Open in IMG/M
3300031539|Ga0307380_10050744All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi4572Open in IMG/M
3300031539|Ga0307380_10110517All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2810Open in IMG/M
3300031539|Ga0307380_10146522All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2351Open in IMG/M
3300031539|Ga0307380_10183012Not Available2042Open in IMG/M
3300031539|Ga0307380_10331830All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1396Open in IMG/M
3300031539|Ga0307380_10885016All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis726Open in IMG/M
3300031563|Ga0307436_1003840All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria6009Open in IMG/M
3300031563|Ga0307436_1115402All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis755Open in IMG/M
3300031565|Ga0307379_10004901All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi18880Open in IMG/M
3300031566|Ga0307378_10664808All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus902Open in IMG/M
3300031566|Ga0307378_10996605All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis683Open in IMG/M
3300031575|Ga0315532_1200903All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis539Open in IMG/M
3300031578|Ga0307376_10260606All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis1167Open in IMG/M
3300031585|Ga0315534_1226840All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis651Open in IMG/M
3300031652|Ga0315553_10057163All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter stevinii2149Open in IMG/M
3300031698|Ga0315537_1024919All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter3620Open in IMG/M
3300031707|Ga0315291_10748191All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis860Open in IMG/M
3300031707|Ga0315291_10945796All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis732Open in IMG/M
3300032118|Ga0315277_11344575All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis623Open in IMG/M
3300032174|Ga0307470_10301839All Organisms → cellular organisms → Bacteria1087Open in IMG/M
3300032180|Ga0307471_104302435All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis503Open in IMG/M
3300032231|Ga0316187_10156229All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1775Open in IMG/M
3300032397|Ga0315287_10467809All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella → Legionella israelensis1497Open in IMG/M
3300032782|Ga0335082_11226595All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis618Open in IMG/M
3300032828|Ga0335080_10785935All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis985Open in IMG/M
3300033291|Ga0307417_10024917All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter2541Open in IMG/M
3300033433|Ga0326726_10351086All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1392Open in IMG/M
3300034090|Ga0326723_0195973All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis894Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil12.87%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface10.89%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands7.92%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil7.92%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh6.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.94%
Salt Marsh SedimentEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment4.95%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment3.96%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment2.97%
SeawaterEnvironmental → Aquatic → Marine → Gulf → Unclassified → Seawater2.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.98%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil1.98%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.98%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.98%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.98%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.98%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.99%
Worm BurrowEnvironmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow0.99%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.99%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.99%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.99%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.99%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.99%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.99%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.99%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.99%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003988Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordB_D2EnvironmentalOpen in IMG/M
3300004003Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWA_D1EnvironmentalOpen in IMG/M
3300004006Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2EnvironmentalOpen in IMG/M
3300004030Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordA_D2EnvironmentalOpen in IMG/M
3300004064Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWC_D1EnvironmentalOpen in IMG/M
3300004145Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005215Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Tolay_CordB_D2EnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006636Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-twoEnvironmentalOpen in IMG/M
3300006792Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL1-DEnvironmentalOpen in IMG/M
3300008470Sediment core microbial communities from Adelie Basin, Antarctica. Combined Assembly of Gp0136540, Gp0136562, Gp0136563EnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009146Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009150Deep subsurface microbial communities from South Atlantic Ocean to uncover new lineages of life (NeLLi) - Benguela_00093 metaGEnvironmentalOpen in IMG/M
3300009166Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009528Deep subsurface microbial communities from South Pacific Ocean to uncover new lineages of life (NeLLi) - Chile_00310 metaGEnvironmentalOpen in IMG/M
3300009529Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaGEnvironmentalOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011118Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014320Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024263Deep subsurface microbial communities from South Atlantic Ocean to uncover new lineages of life (NeLLi) - Benguela_00093 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024353Deep subsurface microbial communities from Anholt, Denmark to uncover new lineages of life (NeLLi) - Anholt_01485 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024433Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025582Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-two (SPAdes)EnvironmentalOpen in IMG/M
3300025721Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL1-D (SPAdes)EnvironmentalOpen in IMG/M
3300025946Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027872 (restricted)Seawater microbial communities from Amundsen Gulf, Northwest Territories, Canada - Cases_109_9EnvironmentalOpen in IMG/M
3300027997 (restricted)Seawater microbial communities from Amundsen Gulf, Northwest Territories, Canada - Cases_109_6EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031228Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031256Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-10EnvironmentalOpen in IMG/M
3300031358Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-110EnvironmentalOpen in IMG/M
3300031359Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-40EnvironmentalOpen in IMG/M
3300031360Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1603-40EnvironmentalOpen in IMG/M
3300031537Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-30EnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031563Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-40EnvironmentalOpen in IMG/M
3300031565Soil microbial communities from Risofladan, Vaasa, Finland - UN-2EnvironmentalOpen in IMG/M
3300031566Soil microbial communities from Risofladan, Vaasa, Finland - UN-1EnvironmentalOpen in IMG/M
3300031575Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment WE1603-70EnvironmentalOpen in IMG/M
3300031578Soil microbial communities from Risofladan, Vaasa, Finland - TR-2EnvironmentalOpen in IMG/M
3300031585Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-40EnvironmentalOpen in IMG/M
3300031652Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-40EnvironmentalOpen in IMG/M
3300031698Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-70EnvironmentalOpen in IMG/M
3300031707Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20EnvironmentalOpen in IMG/M
3300032118Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032231Coastal sediment microbial communities from Maine, United States - Cross River worm burrow 1EnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033291Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-10EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Ga0055475_1010456713300003988Natural And Restored WetlandsMVTAPDNDDDLEPRYAGWLDLPTSTREPMTAKDANAARKALIELDDRTPQQRLLGEPPTWRSALAQKGLC*
Ga0055445_1009909123300004003Natural And Restored WetlandsMGGKYQEQRKPWRTLMVTAPDNDDDLEPRYAGWLDLPTSTREPMTAKDANAARKALIELDDRTPQQRLLGEPPTWRSALAQKGLC*
Ga0055453_1001448033300004006Natural And Restored WetlandsMVSTSGDKDDEEPVYGLVRPARIDARALTAKDANAARKALIALDDRTPQQRLLGEPPTWRSALAQKSQ*
Ga0055444_1034150123300004030Natural And Restored WetlandsMVTAPDNDDDLEPRYAGWLDLPTSTREPMSAKDANAARKALIELDDRTPQQRLLGEPPTWRSALAQKGLC*
Ga0055479_1027718423300004064Natural And Restored WetlandsMVTAPDNDDDLEPRYAGWLDLPSSTREPMTAKDANAARKALIELDDRTPQQRLLGEPPTWRSALAQKGLC*
Ga0055489_1016824113300004145Natural And Restored WetlandsTPEEKDDEEPRYSAWLDLPLSTREPMTAKDANAARKALQALDTRTTIQRMLGEPPRWRSALAQKGLVD*
Ga0062595_10030314213300004479SoilMVTAHEEKNDDEPRYTAWLDLPISTREPMTAKDANEARKALIALDDRTPQQRLLGEPPTWRSALAQRNR*
Ga0062595_10195355823300004479SoilMVTAPEEKDDDESRYTAWLDLPLSTREPMTAKDAVAARKALIALDDRTPQQRLLGEPPSWRSALAQRNR*
Ga0069001_1013278023300005215Natural And Restored WetlandsMVTTPEERDDKEPGYSAWLDLPLSTREPMSAKDAKAARKALQALDTRTTVQRMLGEPPHWRSALAQKGLS
Ga0068868_10136050923300005338Miscanthus RhizosphereMMTAQGESEDDEPRYTAWLDLPISTREPMTAKDANEARKALLALDDRTPQQRLLGEPPTWRSALAQRNR*
Ga0070711_10050573023300005439Corn, Switchgrass And Miscanthus RhizosphereMVTPPEEKDDDEPRYTSWLDLPISTREPMTAKDANEARKALLALDDRTPQQRLLGEPPTWRSALAQRNR*
Ga0070663_10039982733300005455Corn RhizosphereMVTAQEESGDDEPRYTAWLDLPISTREPMTAKDANEARKALIALDDRTPQQRLLGEPPTWRSALAQRNR*
Ga0073909_1068224923300005526Surface SoilMVTAPEEKDDDEPRYTGWLDLPISTREPMTANDANAARKALLALDDRTPQQRLLGEPPTWRSALAQRKR*
Ga0070679_10212546513300005530Corn RhizosphereMVTPPEEKDDEPRYTSWLDLPISTREPMTAKDANEARKALLALDDRTPQQRLLGEPPTWRSALAQRNR*
Ga0068852_10161422113300005616Corn RhizosphereMVTAPEEKDDDEPRYTAWLDLPISTREPMTAKDANEARKALIALDDRTPQQRLLGEPPTWRSALAQRNR*
Ga0068863_10110122723300005841Switchgrass RhizosphereMVTAPEEKDDDEPRYTGWLDLPISTREPMTAKDANEARKALLALDDRTPQQRLLGEPPTWRSALAQRNR*
Ga0075525_1001565913300006636Arctic Peat SoilMVSTPEEKDDDEPRYSAWLDLPISTREPMTAKDANAARKALIALDDRTPQQRLLGEPPTWRSALAQKGA*
Ga0075525_1001911023300006636Arctic Peat SoilMVSTPEQRDDKEPGYSAWLDLPLSTREPMTAKDANTARKALQALDTRTTVQRMLGEPPRWRSALAQKGLVD*
Ga0075530_102816333300006792Arctic Peat SoilMVSTPETRDEKEPGYSAWLDLPLSTREPMTVKNANAARKVLIALDDRTPQQRLLGEPPTWRSALAQKGLR*
Ga0075530_105941723300006792Arctic Peat SoilMVSTPEERDDKEPGYSAWLDLPLSTREPMTAKDANTARKALQALDTRTTVQRMLGEPPCWRSALAQKGLAD*
Ga0115371_1132373853300008470SedimentMASTSEEKYVEEPGHLAWLDLPLSTREPMTAKDANAARNALRALDTRTPIQRMLGEPPRWRSALAQKGLVD*
Ga0105095_1065414223300009053Freshwater SedimentMVTAPEEKDDDEPRYTAWLDLPISTREPMTAKDANEARKALLALDDRTPQQRLLGEPPTWRSALAQRNR*
Ga0105091_1056401813300009146Freshwater SedimentMVTPPEATDDDEPRYTSWLDLPISTREPMTAKDANEARKALLALDDRTPQQRLLGEPPTWRSALAQRNR*
Ga0114918_1011967423300009149Deep SubsurfaceMVTAPDNDDDLEPRYAGWLDLPMSTREPMTAKDANAARKALIELDDRTPQQRLLGEPPTWRSALAQKGLC*
Ga0114918_1041205823300009149Deep SubsurfaceMVTAPDNDDDLEPRYAGWLDLPTATREPMTAKDANAARKALIELDDRTPQQRLLGEPPTWRSALAQKGLC*
Ga0114921_1024914233300009150Deep SubsurfaceMASTSEEKYVEEPGHLAWLDLPLSTREPMTAKDANAARNALRDLDTRTLIQRMLGEPPRWRSALAQKGLVD*
Ga0105100_1072382923300009166Freshwater SedimentPMVTPPEATDDEPRYTSWLDLPISTREPMTAKDANEARKALLALDDRTPQQRLLGEPPTWRSALAQRNR*
Ga0105248_1120149613300009177Switchgrass RhizosphereMVTPPEAKDDDEPRYTSWLDLPISTREPMTAKDANEARKALIALDDRTPQQRLLGEPPTWRSALAQRNR*
Ga0105248_1255516113300009177Switchgrass RhizosphereMVTAPEEKDDDEPRYTGWLDLPISTREPMTANDANAARKALLALDDRTPQQRLLGEPPTWRSALAQRNR*
Ga0114920_1124767423300009528Deep SubsurfaceMASTSEEKYVEEPGHLAWLDLPLSTREPMTAKDANAARKALQVLDTRTAIQRMLGEPPRWRSALAQQSLVD*
Ga0114919_1035591323300009529Deep SubsurfaceMVSTPEERDDKEPGYSAWLDLPLSTREPMTAKDANTARKALQALDTRTTVQRMLGEPPRWRSALAQKGLVD*
Ga0105238_1187680213300009551Corn RhizosphereMVTPPEEKDDDEPRYTSWLDLPISTREPMTAKDANEARKALIALDDRTPQQRLLGEPPTWRSALAQRNR*
Ga0134121_1263409213300010401Terrestrial SoilMVTAPEEKDDDEPRYTAWLDLPISTREPMTAKDANEARKALLALDDRTPQQRLLGEPPTWRSALAQR
Ga0114922_1060434533300011118Deep SubsurfaceMVSTPEVRDDEEPTYSAWLDLPLSTREPMTAKDANAARKALQALDTRTTIQRMLGEPPLWRSALA
Ga0164298_1019570413300012955SoilVENVQMVTAPEKKDDDEPRYTGWLDLPISTREPMTANDANAARKALLALDDRTPQQRLLGEPPTWRSALTQRNR*
Ga0164303_1009275223300012957SoilMVTAPEKKDDDEPRYTGWLDLPISTRELMTANDANAARKALLALDDRTPQQRLLGEPPTWRSALAQRKR*
Ga0164301_1051016813300012960SoilMVTAPEEKDDDEPRYAGWLDLPISTREPMTANDANAARKALLALDDRTPQQRLLGEPPTWRSALTQRNR*
Ga0164302_1004032833300012961SoilMVTAPEEKDDDEPRYAGWLDLPISTREPMTANDANAARKALLALDDRTPQQRLLGEPPTWRSALAQRKR*
Ga0153916_1113493723300012964Freshwater WetlandsMVTAPEEKDDEEPRYTAWLDLPISTREPMTAKDANEARKALLALDDRTPQQRLLGEPPTWRSALAQRNR*
Ga0164308_1228590313300012985SoilMVTAPEKKDDDEPRYTGWLDLPISTREPMTANDANAARKALLALDDRTPQQRLLGEPPTWRSAL
Ga0157378_1204374713300013297Miscanthus RhizosphereMVTSPEEKDDDEPRYTSWLDLPISTREPMTAKDANEARKALLALDDRTPQQRLLGEPPTWRSALAQRNR*
Ga0075342_102775713300014320Natural And Restored WetlandsMVRTPEEKDDEEPRYSAWLDLPLSTREPMTAKDANAARKALQALDTRTTIQRMLGEPPRWRSALAQKGLVD*
Ga0075342_105579113300014320Natural And Restored WetlandsMVSTPEEKDDDEPSYPAWLDLPISMREPMTAKDANAARKALIALDDRTPQQRLLGEPPTWRSALAQKGFRD*
Ga0132258_1155268813300015371Arabidopsis RhizosphereLPMMTAHEEKDDDEPRYTAWLDLPISTREPMTAKDANEARKALLALDDRTPQQRLLGEPPTWRSALAQRNR*
Ga0210003_10000034373300024262Deep SubsurfaceMVSTPEERDDKEPGYSAWLDLPLSTREPMTAKDANTARKALQALDTRTTIQRMLGEPPCWRSALAQKGLAD
Ga0210003_103799233300024262Deep SubsurfaceMVTAPDNDDDLEPRYAGWLDLPMSTREPMTAKDANAARKALIELDDRTPQQRLLGEPPTWRSALAQKGLC
Ga0209978_1052852613300024263Deep SubsurfaceMASTSEEKYVEEPGHLAWLDLPLSTREPMTAKDANAARNALRDLDTRTLIQRMLGEPPRWRSALAQKGLVD
Ga0209979_123763113300024353Deep SubsurfaceMVSTPEERDDKEPGYSAWLDLPLSTREPMTAKDANAARKALRALDTRTTVQRMLGEPPRWRSALAQKGLVD
Ga0209986_1011054323300024433Deep SubsurfaceMVTAPDNDDDLEPRYAGWLDLPTSTREPMTAKDANAARKALIELDDRTPQQRLLGEPPTWRSALAQKGLC
Ga0209386_101139223300025582Arctic Peat SoilMVSTPEQRDDKEPGYSAWLDLPLSTREPMTAKDANTARKALQALDTRTTVQRMLGEPPRWRSALAQKGLVD
Ga0209386_101460713300025582Arctic Peat SoilMVSTPEEKDDDEPRYSAWLDLPISTREPMTAKDANAARKALIALDDRTPQQRLLGEPPTWRSALAQKGA
Ga0209587_100323443300025721Arctic Peat SoilMVSTPEERDDKEPGYSAWLDLPLSTREPMTAKDANTARKALQALDTRTTVQRMLGEPPCWRSALAQKGLAD
Ga0209587_101671523300025721Arctic Peat SoilMVSTPETRDEKEPGYSAWLDLPLSTREPMTVKNANAARKVLIALDDRTPQQRLLGEPPTWRSALAQKGLR
Ga0210126_12703413300025946Natural And Restored WetlandsLLVNQGGGKYQEQRKQPWRTVPMVNTPQGQDEEAGYSAWLDLPLSTREPMTAKDANEARKALRALDTRTTVQRMLGEPPYWRSALAQKDLVD
Ga0207651_1060264323300025960Switchgrass RhizosphereVPLTDTQQESKPEAKDDDEPRYTSWLDLPISTREPMTAKDANEARKALLALDDRTPQQRLLGEPPTWRSALAQRNR
Ga0207703_1116902923300026035Switchgrass RhizosphereMVTPPEEKDDDEPRYTSWLDLPISTREPMTAKDANEARKALLALDDRTPQQRLLGEPPTWRSALAQRNR
Ga0207678_1043773723300026067Corn RhizosphereMVTAQEESGDDEPRYTAWLDLPISTREPMTAKDANEARKALIALDDRTPQQRLLGEPPTWRSALTQRNR
Ga0207648_1039851813300026089Miscanthus RhizosphereMVIPPEKKDDDEPRYTSWLDLPISTREPMTAKDANEARKALLALDDRTPQQRLLGEPPTWRSALAQRNR
Ga0207675_10052235133300026118Switchgrass RhizospherePMVTPPEEKDDDEPRYTSWLDLPISTREPMTAKDANEARKALIALDDRTPQQRLLGEPPTWRSALAQRNR
(restricted) Ga0255058_1037010813300027872SeawaterMVSTPEERDDKEPGYSAWLDLPLSTREPMTAKDANTARKALQALDTRTTVQRMLGEPPRWRSALAQKGLVD
(restricted) Ga0255057_1006636433300027997SeawaterMVNTPEMIDDEEPRYAAWLDLPLSTREPMTAKDANAARKAIQDRDTRDTIQRMMGEPPRWRSALAQKGLAD
(restricted) Ga0255057_1035138313300027997SeawaterMASTSEEKYVEEPGHLAWLDLPLSTREPMTAKDANAARNALRALDTRTPIQRMLGEPPRWRSALAQKGLVD
Ga0307501_1018397723300031152SoilMVTATEEKDEDEPRYTAWLDLPISTREPMTAKDANAARKALVALDDRTPQQRLLGEPPTWRSALAQRNR
Ga0299914_1051842613300031228SoilEDARSNAALEDFPMVTTPEYKDDKEPAYSWLDLPLATREPMTVKDANETRKALQARDTRTTIQRMLGEPPLWRSALAQKGLVD
Ga0299913_1073298113300031229SoilMVSAPEEIDDEYSSWLDLPKSTREPMTVNDAKAARKALQALDTRNAVQRMLGEPPPWRSALAQKGFID
Ga0315556_103077833300031256Salt Marsh SedimentMVSTSVDNDDEEPRYMAWLDLPISTREPMTVKDAKAARRAIQSLDTRTPIQRMMGEPPQWRSALAQKGLAN
Ga0307438_105431123300031358Salt MarshMVSTSGDKDDEEPRYMAWLDLPISTREPMTVKDANAARKALIALDDRTPQQRLLGEPPTWRSALAQKSQ
Ga0307426_127774923300031359Salt MarshMVTAPEEKDDDEPRCLAWLDLPISTREPMTAKDANAARKALLALDDRTPQQRLLGEPPTWRSALAQRNR
Ga0307444_105549323300031360Salt MarshMVSTPEEKDDEEPRYSAWLDLPLSTREPMTAKDANAARKALQALDTRTTIQRMLGEPPRWRSALAQKGLID
Ga0307419_1026287613300031537Salt MarshVQRKPLWEKVPMVSTSVDNDDEEPRYMAWLDLPISTREPMTVKDAKAARRAIQSLDTRTPIQRMMGEPPQWRSALAQKGLAN
Ga0307380_1000568563300031539SoilMVSAPEEKDHEEARYLTWLDLPVSTREPMTAKDAKAARKALQALDTRTTLQRMLGEPPLWRSALAQQGLVD
Ga0307380_1005018763300031539SoilMVSATEEKDHEEARYLTWLDLPVSTREPMTAKDAKAARKALQALDTRTTLQRMLGEPPRWRSALAQKGLVD
Ga0307380_1005022833300031539SoilMVSTPEEKDDEESRYLTWLDLPSSTREPMTAKDANAARKALQALDTRTTLQRMLGEPPRWRSALAQRGFVD
Ga0307380_1005074443300031539SoilMVSTPETIDDEEPRYTAWLDLPVSTREPMTAKDANAARKALMALDDRTPQQRLLGEPPTWRSALAQKSQ
Ga0307380_1011051733300031539SoilMVTAPDNDDDLEPRYAAWLDLPTSTREPMTAKDANAARKALIELDDRTPQQRLLGEPPTWRSALAQKGLC
Ga0307380_1014652213300031539SoilMQALENALMVTAPDTDDDLEPRCMAWLDLPISTREPMTAKDANAARKALRELDDRTPQQRLLGEPPTWRSALAQKGLR
Ga0307380_1018301243300031539SoilMVTAPDNDDDLEPRYAGWLDLPSSTREPMTAKDANAARKALIELDDRTPQQRLLGEPPTWRSALAQKGLC
Ga0307380_1033183023300031539SoilMVSTSEERDDKEPGYSAWLDLPLSTREPMTAKDANTARKALQALDTRTTVQRMLGEPPRWRSALAQKGLVD
Ga0307380_1088501623300031539SoilMVSTPEEKDHEEARYLTWLDLPVSTREPMTAKDANAARKALQALDTRTTLQRMLGEPPRWRSALAQKGLVD
Ga0307436_100384023300031563Salt MarshMVSTPEEKDDEEPRYSAWLDLPLSTREPMTAKDANAARKALQALDTRTTIQRMLGEPPRWRSALAQKGLVD
Ga0307436_111540223300031563Salt MarshMVSTPEEKDDEEPRYSAWLDLPLSTREPMTAKDANAARKALQALDNRTTIQRMLGEPPRWRSALAQKGLID
Ga0307379_10004901133300031565SoilMVSAPEEKDHEEARYLTWLDLPVSTREPMTAKDAKAARKALQALDTRTTLQRMLGEPPLWRSALAQKGLVD
Ga0307378_1066480833300031566SoilMVSTPEEKDDDEPGYSAWLDLPRSTREPMTVKDANAARKALIALDDRTPQQRLLGEPPTW
Ga0307378_1099660513300031566SoilMVTAPDTDDDLEPRYMAWLDLPTSTREPMTAKDANAARKALIELDDRTPQQRLLGEPPTWRSALAQRGARD
Ga0315532_120090323300031575Salt Marsh SedimentMVSTSGDKDDEEPRYTAWLDLPISTREPMTAKDANAARKALIALDDRTPQQRLLGEPPTWRSALAQKSQ
Ga0307376_1026060633300031578SoilPPDNDDDLEPRYAGWLDLPTSTREPMTAKDANAARKALIELDDRTPQQRLLGEPPTWRSALAQKGLC
Ga0315534_122684013300031585Salt Marsh SedimentMASTPEEKDYEEPGYSAWLDLPLSTREPMTAKDANEARKALRALDTRTAIQRMLGEPPRWRSALAQKGLVD
Ga0315553_1005716323300031652Salt Marsh SedimentMASTSGDKDDEEPRYTAWLDLPISTREPMTAKDANAARKALIALDDRTPQQRLLGEPPTWRSALAQKSQ
Ga0315537_102491943300031698Salt Marsh SedimentMVSTPEEKDDEEPRYSAWLDLPLSTREPMTAKDAKAAREALQALDTRTTIQRMLGEPPRWRSALAQKGLID
Ga0315291_1074819123300031707SedimentMVTAPEDKDDDESRYTAWLDLPISTREPMTANDANEARKALLALDDRTPQQRLLGEPPTWRSALAQRNR
Ga0315291_1094579613300031707SedimentMVSTPEEKDDDEPRYPAWLDLPLSTREPMTAKDANAARKALIALDDRTPQQRLLGEPPTWRSALAQKGA
Ga0315277_1134457513300032118SedimentMVSTPEEKDDDEPRYPAWLDLPLSTREPMTAKDANAARKALIALDDRTPQQRLLGEPPTWRS
Ga0307470_1030183923300032174Hardwood Forest SoilMVTPPEATDDDEPRYTSWLDLPISTREPMTAKDANEARKALLALDDRTPQQRLLGEPPTWRSALAQRNR
Ga0307471_10430243513300032180Hardwood Forest SoilMVTAPEEKEDDEPRYTAWLDLPISTREPMTAKDANEARKALLALDDRTPQQRLLGEPPTWRSALAQRNR
Ga0316187_1015622933300032231Worm BurrowMVSTPEVKDDEEPTYSAWLDLPLSTREPMTAKDANAARKALQALDTRTNIQRMLGEPPRWRSALAEKGLVD
Ga0315287_1046780913300032397SedimentVPMVTAPEDKDDDESRYTAWLDLPISTREPMTANDANEARKALLALDDRTPQQRLLGEPPTWRSALAQRNR
Ga0335082_1122659513300032782SoilMVTAPEEKDDDEPRYTAWLDLPISTREPMTAKDANAARKALLALDDRTPQQRLLGEPPTWRSALAQRNR
Ga0335080_1078593523300032828SoilEEKDGDEPRYAAWLDLPISTREPMTAKDANEARKALLALDDRTPQQRLLGEPPTWRSALAQRNR
Ga0307417_1002491743300033291Salt MarshVQRKPLWEKVPMVSTSVDNDDEEPRYMAWLDLPISTREPMTVKDAKAARRAIQSLDTRTPIQRMMGEPPQWRSA
Ga0326726_1035108623300033433Peat SoilMVTATEEKDDDEPRYTAWLDLPISTREPMTAKDANAARKALVALDDRTPQQRLLGEPPTWRSALAQRNR
Ga0326723_0195973_441_6653300034090Peat SoilLENVLMVTATEEKDDDEPRYTAWLDLPISTREPMTAKDANAARKALVALDDRTPQQRLLGEPPTWRSALAQRNR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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