Metagenome / Metatranscriptome Family F103188

Basic Information
Family ID	F103188
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	44 residues
Representative Sequence	INKIRLNILKGAKPESFRFSSLNTQKITFAGFNKPRNQSKRIAA
Number of Associated Samples	90
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	55.45 %
% of genes near scaffold ends (potentially truncated)	57.43 %
% of genes from short scaffolds (< 2000 bps)	76.24 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (98.020 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (24.752 % of family members)
Environment Ontology (ENVO)	Unclassified (47.525 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (94.059 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.82% β-sheet: 0.00% Coil/Unstructured: 93.18%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF02737	3HCDH_N	38.61
PF00850	Hist_deacetyl	22.77
PF16036	Chalcone_3	21.78
PF02254	TrkA_N	3.96
PF08402	TOBE_2	1.98
PF13193	AMP-binding_C	0.99
PF16387	DUF4996	0.99
PF03009	GDPD	0.99
PF06155	GBBH-like_N	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0123	Acetoin utilization deacetylase AcuC or a related deacetylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	45.54
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	38.61
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	38.61
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	38.61
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	38.61
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	38.61
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	38.61
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	38.61
COG0584	Glycerophosphoryl diester phosphodiesterase	Lipid transport and metabolism [I]	0.99
COG3536	Uncharacterized conserved protein, DUF971 family	Function unknown [S]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	96.04 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	88.12 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	83.17 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	83.17 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
unclassified Pelagibacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae	55.45 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
alpha proteobacterium HIMB59	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	55.45 %
Unclassified	root	N/A	1.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573027\|GS312G0146KB_1113235891314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	911	Open in IMG/M
3300001951\|GOS2249_1027331	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300001966\|GOS2245_1095848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	963	Open in IMG/M
3300001967\|GOS2242_1045716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	2200	Open in IMG/M
3300002040\|GOScombined01_106121758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	958	Open in IMG/M
3300003476\|NAP2_1077161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	715	Open in IMG/M
3300003620\|JGI26273J51734_10066102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1084	Open in IMG/M
3300003894\|Ga0063241_1012624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	4819	Open in IMG/M
3300004279\|Ga0066605_10382924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	507	Open in IMG/M
3300005239\|Ga0073579_1449882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	765	Open in IMG/M
3300005432\|Ga0066845_10048235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	1566	Open in IMG/M
3300005510\|Ga0066825_10224447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	692	Open in IMG/M
3300005608\|Ga0066840_10045323	Not Available	883	Open in IMG/M
3300005747\|Ga0076924_1239116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	2339	Open in IMG/M
3300005837\|Ga0078893_10052618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	2285	Open in IMG/M
3300006027\|Ga0075462_10041352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	1474	Open in IMG/M
3300006027\|Ga0075462_10245887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	531	Open in IMG/M
3300006617\|Ga0101443_100050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	3374	Open in IMG/M
3300006710\|Ga0031677_1220300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	543	Open in IMG/M
3300006867\|Ga0075476_10290548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	575	Open in IMG/M
3300007778\|Ga0102954_1023761	All Organisms → cellular organisms → Bacteria → Proteobacteria	1712	Open in IMG/M
3300009027\|Ga0102957_1016407	All Organisms → cellular organisms → Bacteria → Proteobacteria	2522	Open in IMG/M
3300009124\|Ga0118687_10156544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	816	Open in IMG/M
3300009550\|Ga0115013_10017977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	3749	Open in IMG/M
3300009550\|Ga0115013_10479642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	808	Open in IMG/M
3300009757\|Ga0123367_1171042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	742	Open in IMG/M
3300012394\|Ga0123365_1212567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	746	Open in IMG/M
3300012520\|Ga0129344_1170790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	809	Open in IMG/M
3300012936\|Ga0163109_10784029	Not Available	697	Open in IMG/M
3300012936\|Ga0163109_10795173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	691	Open in IMG/M
3300012953\|Ga0163179_10756096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	830	Open in IMG/M
3300012954\|Ga0163111_10005527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	8331	Open in IMG/M
3300012954\|Ga0163111_12439451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	532	Open in IMG/M
3300016745\|Ga0182093_1697372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	902	Open in IMG/M
3300016747\|Ga0182078_10665662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	639	Open in IMG/M
3300017725\|Ga0181398_1112803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	648	Open in IMG/M
3300017739\|Ga0181433_1115023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	647	Open in IMG/M
3300017745\|Ga0181427_1111690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	667	Open in IMG/M
3300017755\|Ga0181411_1018253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	2290	Open in IMG/M
3300017779\|Ga0181395_1038207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	1608	Open in IMG/M
3300017779\|Ga0181395_1228627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	572	Open in IMG/M
3300017786\|Ga0181424_10043438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	1947	Open in IMG/M
3300017818\|Ga0181565_10085374	All Organisms → cellular organisms → Bacteria → Proteobacteria	2247	Open in IMG/M
3300017824\|Ga0181552_10128996	All Organisms → cellular organisms → Bacteria → Proteobacteria	1369	Open in IMG/M
3300017949\|Ga0181584_10805652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	555	Open in IMG/M
3300017952\|Ga0181583_10094257	All Organisms → cellular organisms → Bacteria → Proteobacteria	2055	Open in IMG/M
3300017952\|Ga0181583_10472463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	770	Open in IMG/M
3300017962\|Ga0181581_10267657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	1107	Open in IMG/M
3300017967\|Ga0181590_10326530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	1108	Open in IMG/M
3300017969\|Ga0181585_11050616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	517	Open in IMG/M
3300018036\|Ga0181600_10011577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	6379	Open in IMG/M
3300018041\|Ga0181601_10638811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	542	Open in IMG/M
3300018049\|Ga0181572_10467464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	780	Open in IMG/M
3300018417\|Ga0181558_10644856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	542	Open in IMG/M
3300018418\|Ga0181567_10592678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	716	Open in IMG/M
3300018423\|Ga0181593_10141287	All Organisms → cellular organisms → Bacteria → Proteobacteria	1943	Open in IMG/M
3300018424\|Ga0181591_10562276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	822	Open in IMG/M
3300018428\|Ga0181568_10195739	All Organisms → cellular organisms → Bacteria → Proteobacteria	1676	Open in IMG/M
3300019267\|Ga0182069_1243234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	634	Open in IMG/M
3300019280\|Ga0182068_1027678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	575	Open in IMG/M
3300020177\|Ga0181596_10075197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	1821	Open in IMG/M
3300020191\|Ga0181604_10460056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	533	Open in IMG/M
3300020266\|Ga0211519_1005768	All Organisms → cellular organisms → Bacteria → Proteobacteria	3567	Open in IMG/M
3300020296\|Ga0211474_1007191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	2225	Open in IMG/M
3300020336\|Ga0211510_1103142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	655	Open in IMG/M
3300020349\|Ga0211511_1019820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	1800	Open in IMG/M
3300020349\|Ga0211511_1116035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	615	Open in IMG/M
3300020374\|Ga0211477_10172189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	765	Open in IMG/M
3300020377\|Ga0211647_10154779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	758	Open in IMG/M
3300020380\|Ga0211498_10002788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	6354	Open in IMG/M
3300020385\|Ga0211677_10006728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	6787	Open in IMG/M
3300020392\|Ga0211666_10021782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	2994	Open in IMG/M
3300020405\|Ga0211496_10327348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	572	Open in IMG/M
3300020416\|Ga0211644_10503894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	500	Open in IMG/M
3300020419\|Ga0211512_10439652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	586	Open in IMG/M
3300020440\|Ga0211518_10481819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	562	Open in IMG/M
3300020450\|Ga0211641_10173759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	1081	Open in IMG/M
3300020455\|Ga0211664_10012430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	4426	Open in IMG/M
3300020457\|Ga0211643_10537632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	574	Open in IMG/M
3300020463\|Ga0211676_10026685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	4452	Open in IMG/M
3300020463\|Ga0211676_10070034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	2403	Open in IMG/M
3300020469\|Ga0211577_10060071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	2735	Open in IMG/M
3300020469\|Ga0211577_10312428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	993	Open in IMG/M
3300020810\|Ga0181598_1209675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	740	Open in IMG/M
3300021364\|Ga0213859_10137985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	1150	Open in IMG/M
3300021368\|Ga0213860_10029707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	2293	Open in IMG/M
3300021378\|Ga0213861_10028096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	3838	Open in IMG/M
3300022923\|Ga0255783_10158295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	1083	Open in IMG/M
3300024235\|Ga0228665_1040095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	965	Open in IMG/M
3300024235\|Ga0228665_1077245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	686	Open in IMG/M
3300026258\|Ga0208130_1153001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	616	Open in IMG/M
3300026517\|Ga0228607_1044656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	1138	Open in IMG/M
3300027906\|Ga0209404_10333063	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300028008\|Ga0228674_1033756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	2036	Open in IMG/M
3300028115\|Ga0233450_10147749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	1170	Open in IMG/M
3300028133\|Ga0228609_1073385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	906	Open in IMG/M
3300028133\|Ga0228609_1111240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	697	Open in IMG/M
3300028134\|Ga0256411_1147876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	773	Open in IMG/M
3300031851\|Ga0315320_10251810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	1279	Open in IMG/M
3300032047\|Ga0315330_10150900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	1523	Open in IMG/M
3300032088\|Ga0315321_10680652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	599	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	97.03%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.98%
Sediment	Environmental → Aquatic → Sediment	0.99%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	32.67%
Unclassified	Environmental → Aquatic → Marine → Unclassified	22.77%
Oceanic	Environmental → Aquatic → Marine → Oceanic	16.83%
Coastal	Environmental → Aquatic → Marine → Coastal	16.83%
Strait	Environmental → Aquatic → Marine → Strait	6.93%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.98%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	24.75%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	22.77%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	16.83%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	12.87%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	6.93%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	6.93%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	3.96%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.98%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.99%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	24.75%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	21.78%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	9.90%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	9.90%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	6.93%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	3.96%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.96%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	3.96%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	2.97%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	1.98%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.99%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.99%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.99%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.99%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine	0.99%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.99%
Estuarine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Estuarine	0.99%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.99%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	0.99%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573027	Estuarine microbial communities from Columbia River, sample from CR-7km from mouth, GS312-FOS-0p8-CR7-chlmax	Environmental	Open in IMG/M
3300001951	Marine microbial communities from North Seamore Island, Equador - GS034	Environmental	Open in IMG/M
3300001966	Marine microbial communities from Roca Redonda, Equador - GS030	Environmental	Open in IMG/M
3300001967	Marine microbial communities from Devil's Crown, Floreana Island, Equador - GS027	Environmental	Open in IMG/M
3300002040	GS000c - Sargasso Station 3	Environmental	Open in IMG/M
3300003476	Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 2	Environmental	Open in IMG/M
3300003620	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA	Environmental	Open in IMG/M
3300003894	Marine microbial communities from the northern Gulf of Mexico hypoxic zone - Cultivation independent assessment	Environmental	Open in IMG/M
3300004279	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m	Environmental	Open in IMG/M
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental	Open in IMG/M
3300005432	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV78	Environmental	Open in IMG/M
3300005510	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV45	Environmental	Open in IMG/M
3300005608	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF84A	Environmental	Open in IMG/M
3300005747	Seawater microbial communities from Vineyard Sound, MA, USA - control T14	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006617	Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ09 time point	Environmental	Open in IMG/M
3300006710	Metatranscriptome of deep ocean microbial communities from Blanes Bay, Balearic Sea - MPBL120807 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300007778	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_H2O_MG	Environmental	Open in IMG/M
3300009027	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300009550	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome	Environmental	Open in IMG/M
3300009757	Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_205_2m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012394	Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_201_2m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012520	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300016745	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041411BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016747	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017739	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10	Environmental	Open in IMG/M
3300017745	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017779	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019267	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071402VT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019280	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071401AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020177	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041402US metaG (spades assembly)	Environmental	Open in IMG/M
3300020191	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)	Environmental	Open in IMG/M
3300020266	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX556082-ERR598951)	Environmental	Open in IMG/M
3300020296	Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX556002-ERR599140)	Environmental	Open in IMG/M
3300020336	Marine microbial communities from Tara Oceans - TARA_E500000081 (ERX289008-ERR315860)	Environmental	Open in IMG/M
3300020349	Marine microbial communities from Tara Oceans - TARA_E500000081 (ERX289006-ERR315859)	Environmental	Open in IMG/M
3300020374	Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291766-ERR318618)	Environmental	Open in IMG/M
3300020377	Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556007-ERR599065)	Environmental	Open in IMG/M
3300020380	Marine microbial communities from Tara Oceans - TARA_B000000565 (ERX555945-ERR599058)	Environmental	Open in IMG/M
3300020385	Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)	Environmental	Open in IMG/M
3300020392	Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX555916-ERR599163)	Environmental	Open in IMG/M
3300020405	Marine microbial communities from Tara Oceans - TARA_B000000532 (ERX556129-ERR599012)	Environmental	Open in IMG/M
3300020416	Marine microbial communities from Tara Oceans - TARA_B100001109 (ERX556137-ERR599039)	Environmental	Open in IMG/M
3300020419	Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX555964-ERR598955)	Environmental	Open in IMG/M
3300020440	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)	Environmental	Open in IMG/M
3300020450	Marine microbial communities from Tara Oceans - TARA_B100000575 (ERX555933-ERR599077)	Environmental	Open in IMG/M
3300020455	Marine microbial communities from Tara Oceans - TARA_B100000965 (ERX555917-ERR599081)	Environmental	Open in IMG/M
3300020457	Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)	Environmental	Open in IMG/M
3300020463	Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300020810	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly)	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300021368	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550	Environmental	Open in IMG/M
3300021378	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131	Environmental	Open in IMG/M
3300022923	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG	Environmental	Open in IMG/M
3300024235	Seawater microbial communities from Monterey Bay, California, United States - 79D	Environmental	Open in IMG/M
3300026258	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV78 (SPAdes)	Environmental	Open in IMG/M
3300026517	Seawater microbial communities from Monterey Bay, California, United States - 8D	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028008	Seawater microbial communities from Monterey Bay, California, United States - 1D_r	Environmental	Open in IMG/M
3300028115	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501CT (spades assembly)	Environmental	Open in IMG/M
3300028133	Seawater microbial communities from Monterey Bay, California, United States - 10D	Environmental	Open in IMG/M
3300028134	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_12 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M
3300032047	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915	Environmental	Open in IMG/M
3300032088	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 21515	Environmental	Open in IMG/M

Geographical Distribution

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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103188

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GS312G0146KB_00190680	2189573027	Marine Estuarine	MSKIRLNILKDSKASSSFRFSSLNTQKIVFAADSKPINQSKRISI
GOS2249_10273312	3300001951	Marine	MINKIRLNILKGAKPESFRFSSLNTQKITFAGFNKPRNQSKR
GOS2245_10958482	3300001966	Marine	QTMINKIRLNILKGAKPESFRFSSLNTQKITFAGFNKPRNQSKRIAA*
GOS2242_10457162	3300001967	Marine	MSKIRLNILKNSKASSSFRFSSLNSQKIVFAANSKPINQSKRISL*
GOScombined01_1061217583	3300002040	Marine	MINKIRLNILKGAKPESFRFSSLNIQKITFAGFNKPRNQSKRIAA*
NAP2_10771611	3300003476	Estuarine	MSKIRLNILKNSKASSSFRFSSLNSQKIVFAANSKPVNQSKRISL*
JGI26273J51734_100661022	3300003620	Marine	MSKIKTMSKIKLNILKDSKASSSFRFSSLNTQKIVFAADSKPINQSKRISI*
Ga0063241_10126247	3300003894	Marine	MINKIRLNILKGAKPESFRFSSLNTQKITFAGFNKPRNQSKRIAA*
Ga0066605_103829241	3300004279	Marine	MSKIRLNILKDSKASSSFRFSSLNTQKIVFAADSKPINQSKRISI*
Ga0073579_14498821	3300005239	Marine	MSKIKLNILKESKASESFRFSSLNTQKIVFAGYNKPRIQSKRIYL*
Ga0066845_100482352	3300005432	Marine	MSKIRLNILKNSKASSSFRFSALNSQKIVFAANSKPINQSKRTSL*
Ga0066825_102244471	3300005510	Marine	NMSKIRLNILKNSKASSSFRFSALNSQKIVFAANSKPINQSKRTSL*
Ga0066840_100453232	3300005608	Marine	MSKIRLNIIKDSKASSTFRFSPLNANKIVFAANAKPSNVSRRV*
Ga0076924_12391164	3300005747	Marine	MSKIRLNILKDSKASSSFRFSSLNTQKIVFAADSKPINQSKRISL*
Ga0078893_100526183	3300005837	Marine Surface Water	MEKTMSKIRLNILKDSKASSSFRFSSLNTQKIVFAADSKPINQSKRISI*
Ga0075462_100413522	3300006027	Aqueous	MISKIRLNILKGSKPASYRFSSLNPKKITFAGFNKPRNQSKRIAA*
Ga0075462_102458871	3300006027	Aqueous	KGSKPASYRFSSLNPKKITFAGFNKPRNQSKRIAA*
Ga0101443_1000505	3300006617	Marine Surface Water	MFNKIRLNILKGTKLESYRFSSLNTQKITFAGFNKPRNQSKRIVA*
Ga0031677_12203002	3300006710	Deep Ocean	HTMINKIRLNILKGAKPESFRFSSLNTQKITFAGFNKPRNQSKRIAA*
Ga0075476_102905481	3300006867	Aqueous	LKGSKPASYRFSSLNPKKITFAGFNKPRNQSKRIAA*
Ga0102954_10237611	3300007778	Water	GSKPASYRFSSLNPKKITFAGFNKPRNQSKRIAA*
Ga0102957_10164072	3300009027	Pond Water	MISKIRLNILKGSKPASYRLSSFNPKKITFAGFNKPRNQSKRIVA*
Ga0118687_101565443	3300009124	Sediment	NTDMISKIRLNILKGSKPASYRFSSLNPKKITFAGFNKPRNQSKRIAA*
Ga0115013_100179775	3300009550	Marine	MSKIRLNILKDAKASESFRFSALNTQKIIFAAFNKPRNQSKRISL*
Ga0115013_104796422	3300009550	Marine	MSKIKLNILKDTKALESYRFSDLNTQKIIFAGYNKPRNQSKRVSL*
Ga0123367_11710422	3300009757	Marine	IHTMINKIRLNILKGAKPESFRFSSLNTQKITFAGFNKPRNQSKRIAA*
Ga0123365_12125671	3300012394	Marine	TMINKIRLNILKGAKPESFRFSSLNTQKITFAGFNKPRNQSKRIAA*
Ga0129344_11707903	3300012520	Aqueous	ENTDMISKIRLNILKGSKPASYRFSSLNPKKITFAGFNKPRNQSKRIAA*
Ga0163109_107840291	3300012936	Surface Seawater	LKGAKPESFRFSSLNTQKITFAGFNKPRNQSKRIAA*
Ga0163109_107951732	3300012936	Surface Seawater	MSKIRLNILKNSKASSSFRFSSLNSQKIVFAANSKPVNQSKRI
Ga0163179_107560961	3300012953	Seawater	VIIFKTRRIIMSKIKLNILKESKASESFRFSSLNTQRIVFAGYNKPRIQSKRIYL*
Ga0163111_100055275	3300012954	Surface Seawater	MSKIKLNIFKESKASESFRFSSLNTQKIIFAGYNKPRIQSKRIYL*
Ga0163111_124394511	3300012954	Surface Seawater	MSKIKLNVLKDSKVTESYRFSYLNTQKIIFAAYNKPRNQSKRVAL*
Ga0182093_16973723	3300016745	Salt Marsh	HTMINKIRLNILKGAKPESFRFSSLNTQKITFAGFNKPRNQSKRIAA
Ga0182078_106656622	3300016747	Salt Marsh	MISKIRLNILKGSKPASYRFSSLNPKKITFAGFNKPRNQSK
Ga0181398_11128031	3300017725	Seawater	MSKIRLNILKDSKASSSFRFSSLNPQKIVFAADSKPINQSKR
Ga0181433_11150231	3300017739	Seawater	MSKIKLNILKKSKASESFRFSSLNTQKIVFAGYNKPRIQSKRMYL
Ga0181427_11116901	3300017745	Seawater	IFKIRRIIMSKIKLNILKESKASECFRFSSLNTQKIVFAGYNKPRIQSKRIYL
Ga0181411_10182531	3300017755	Seawater	LKDSKASSSFRFSSLNTQKIVFAADSKPINQSKRISI
Ga0181395_10382071	3300017779	Seawater	KEKTMSKIRLNILKDSKASSSFRFSSLNTQKIVFAADSKPINQSKRISI
Ga0181395_12286272	3300017779	Seawater	MSKIKLNILKESKASKSFRFSSLNTQKIVFAGYNKPRIQSKRIYL
Ga0181424_100434382	3300017786	Seawater	MSKIKLNILKESKASESFRFSSLNIQKIIFAGYNKPRIQSKRIYL
Ga0181565_100853742	3300017818	Salt Marsh	MISKIRLNILKGSKPASYRLSSFNPKKITFVGFKKPRNQSKRIAA
Ga0181552_101289962	3300017824	Salt Marsh	MISKIRLNILKGSKPASYRFSSLNPKKITFAGFNKPRNQSKRIAA
Ga0181584_108056521	3300017949	Salt Marsh	QTMISKIRLNILKGYKPASYRLSSFNPKKITFVGFKKPRNQSKRIAA
Ga0181583_100942573	3300017952	Salt Marsh	MISKIRLNILKGSKPASYRLSSFNPKKITFAGFKKPRNQSKRIAA
Ga0181583_104724632	3300017952	Salt Marsh	MISKIRLNILKGSKPASYRFSSLNPKKITFAGFNKPRNQSKRIA
Ga0181581_102676571	3300017962	Salt Marsh	LKGSKPASYRFSSLNPKKITFAGFNKPRNQSKRIAA
Ga0181590_103265302	3300017967	Salt Marsh	MINKIRLNIRKGAKPESFRFSSLNTQKITFAGFNKPRNQSKRIAA
Ga0181585_110506162	3300017969	Salt Marsh	MSKIRLNILKNSKASSSFRFSALNSQKIVFAANSKPINQ
Ga0181600_100115777	3300018036	Salt Marsh	MSKIRLNILKNSKASSSFRFSALNSQKIVFAANSKPINQSKRTSL
Ga0181601_106388112	3300018041	Salt Marsh	GASPSSKTLKIRRIQTMINKIRLNILKGAKPESFRFSSLNTQKITFAGFNKPRNQSKRIA
Ga0181572_104674642	3300018049	Salt Marsh	MISKIRMNILKGSKPASYRFSSLNPKKITFAGFNKPRNQSKRIAA
Ga0181558_106448561	3300018417	Salt Marsh	RIHTMINKIRLNILKGAKPESFRFSSLNTQKITFAGFNKPRNQSKRIAA
Ga0181567_105926781	3300018418	Salt Marsh	MSKIRLNILKNSKASSSFRFSALNSQKIVFAANSKPINQSKR
Ga0181593_101412873	3300018423	Salt Marsh	MISKIRLNILKGSKPASYRLSSFNQKKITFAGFNKPRNQSKRIAA
Ga0181591_105622762	3300018424	Salt Marsh	LKGSKPASYRFSSFNPKKITFAGFNKPRNQSKRIAA
Ga0181568_101957392	3300018428	Salt Marsh	MIYKIRLNILKGSKPASYRFSSLNPKKITFAGFNKPRNQSKRIAA
Ga0182069_12432341	3300019267	Salt Marsh	TMINKIRLNILKGAKPESFRFSSLNTQKITFAGFNKPRNQSKRIAA
Ga0182068_10276782	3300019280	Salt Marsh	DMISKIRLNILKGSKPASYRFSSLNPKKITFAGFNKPRNQSKRIAA
Ga0181596_100751971	3300020177	Salt Marsh	KIRLNILKGSKPASYRFSSLNPKKITFAGFNKPRNQSKRIAA
Ga0181604_104600562	3300020191	Salt Marsh	IRLNILKGAKPESFRFSSLNTQKITFAGFNKPRNQSKRIAA
Ga0211519_10057685	3300020266	Marine	MSKIRLNILKNSKASSSFRFSSLNSQKIVFAANSKPVNQSKRISL
Ga0211474_10071912	3300020296	Marine	MSKIKLNILKESKASESFRFSSLNTQKIVFAGYNKPRIQSKRIYL
Ga0211510_11031422	3300020336	Marine	MSKIKLNILKESKASESFRFSSLNTQKIVFAGYNKPRIQSKRMYL
Ga0211511_10198203	3300020349	Marine	MSKIKLNILKESKASESFRFSSLNPQKIVFAGYNKPRIQSKRMYL
Ga0211511_11160352	3300020349	Marine	LNILKESKASESFRFSSLNTQKIIFAGYNKPRIQSKRIYL
Ga0211477_101721891	3300020374	Marine	PRLTSKTLKIRRIHTMINKIRLNILKGAKPESFRFSSLNTQKITFAGFNKPRNQSKRIAA
Ga0211647_101547791	3300020377	Marine	INKIRLNILKGAKPESFRFSSLNTQKITFAGFNKPRNQSKRIAA
Ga0211498_100027887	3300020380	Marine	MINKIRLNILKGAKPESFRFSSLNTQKITFAGFNKPRN
Ga0211677_100067287	3300020385	Marine	MSKIRLNILKDSKASSSFRFSSLNPQKIVFAADSKPINQSKRISI
Ga0211666_100217822	3300020392	Marine	MSKIRLNILKNSKASSSFRFSSLNSQKIVFAANSKPINQSKRISL
Ga0211496_103273481	3300020405	Marine	KIRLNILKGAKPESFRFSSLNTQKITFAGFNKPRNQSKRIAA
Ga0211644_105038941	3300020416	Marine	RIQTMISKIRLNILKGAKPESFRFSSLNTQKITFAGFNKPRNQSKRIAA
Ga0211512_104396522	3300020419	Marine	MSKIKLNILKESKASESFRFSSLNTQKIVFAGYNKPRIQS
Ga0211518_104818191	3300020440	Marine	IMSKIKLNILKESKASESFRFSSLNPQKIVFAGYNKPRIQSKRMYL
Ga0211641_101737592	3300020450	Marine	MSKIKLNILKDNKASESYRFSALNTQKITFAAYNKPRNQSKRISL
Ga0211664_100124301	3300020455	Marine	MSKIRLNILKDTKASESYRFSALNTQKIIFAAFNKPRNQSKRISL
Ga0211643_105376321	3300020457	Marine	MSKIRLNILKNSKASSSFRFSSLNSQKIVFAANSKPINQ
Ga0211676_100266855	3300020463	Marine	MSKIKFNIFKESKASESFRFSSLNTQKIIFAGYNKPRIQSKRIYL
Ga0211676_100700344	3300020463	Marine	KIKLNILKESKASESFRFSSLNTQKIIFAGYNKPRIQSKRIYL
Ga0211577_100600715	3300020469	Marine	IKLNILKESKASESFRFSSLNTQKIIFAGYNKPRIQSKRIYL
Ga0211577_103124282	3300020469	Marine	IKLNILKESKASESFRFSSLNTQKIVFAGYNKPRIQSKRMYL
Ga0181598_12096752	3300020810	Salt Marsh	NILKGSKPASYRFSSLNPKKITFAGFNKPRNQSKRIAA
Ga0213859_101379851	3300021364	Seawater	KGSKPASYRFSSLNPKKITFAGFNKPRNQSKRIAA
Ga0213860_100297072	3300021368	Seawater	MINKIRLNILKGAKPESFRFSSLNTQKITFAGFNKPRNQSKRIAA
Ga0213861_100280962	3300021378	Seawater	MEKTMSKIRLNILKDSKASSSFRFSSLNTQKIVFAADSKPINQSKRISI
Ga0255783_101582951	3300022923	Salt Marsh	MISKIRLNILKGSKPASYRFSSLNPKKITFAGFNK
Ga0228665_10400952	3300024235	Seawater	MSKIRLNILKDSKASSSFRFSSLNTQKIVFAADRKP
Ga0228665_10772451	3300024235	Seawater	IIQLKEKTMSKIRLNILKDSKASSSFRFSSLNTQKIVFAADSKPINQSKRISI
Ga0208130_11530011	3300026258	Marine	MINKIRLNILKGAKPESFRFSSLNTQKITFAGFNKPRNQSKRIA
Ga0228607_10446562	3300026517	Seawater	IQLKEKTMSKIRLNILKDSKASSSFRFSSLNTQKIVFAADSKPINQSKRISI
Ga0209404_103330631	3300027906	Marine	MSKIKLNILKDTKALESYRFSDLNTQKIIFAGYNKPRNQSKRVSL
Ga0228674_10337562	3300028008	Seawater	MSKIRLNILKDSKASSSFRFSSLNTQKIVFAADSKPI
Ga0233450_101477491	3300028115	Salt Marsh	MISKIRLNILKGSKPASYRFSSLNPKKITFAGFNKPRNQSKR
Ga0228609_10733852	3300028133	Seawater	QLKEKTMSKIRLNILKDSKASSSFRFSSLNTQKIVFAADSKPINQSKRISI
Ga0228609_11112402	3300028133	Seawater	MEKTMSKIRLNILKDSKASSSFRFSSLNTQKIVFAADSKPIN
Ga0256411_11478761	3300028134	Seawater	IIQLMEKTMSKIRLNILKDSKASSSFRFSSLNTQKIVFAADSKPINQSKRISI
Ga0315320_102518101	3300031851	Seawater	MLNKIRLNILKGTKLESYRFSSLNTQKITFAGFNKPRN
Ga0315330_101509003	3300032047	Seawater	MSKIKLNILKESKASESFRFSSLNTQKIVFAGYNKPRTQSKRMYL
Ga0315321_106806521	3300032088	Seawater	MSKIRLNILKDSKASSSFRFSSLNPQKIVFAANSKPINQSKRI

Hidden Markov Model


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