Metagenome / Metatranscriptome Family F103191

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103191
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	96 residues
Representative Sequence	MAWPRSSRVRLVWALELSLGLELYACAVLALHARGLRATPLEASPALVLPALVIPPVFYVLVGLVSLRPLSIRSVLSAAAAMCGLHALLVMATGAL
Number of Associated Samples	94
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	44.55 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	89.11 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (13.861 % of family members)
Environment Ontology (ENVO)	Unclassified (22.772 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.584 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.52% β-sheet: 0.00% Coil/Unstructured: 35.48%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF03259	Robl_LC7	90.10
PF14332	DUF4388	4.95
PF02895	H-kinase_dim	0.99
PF00072	Response_reg	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG2018	Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family	Signal transduction mechanisms [T]	90.10
COG0643	Chemotaxis protein histidine kinase CheA	Signal transduction mechanisms [T]	1.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	85.15 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	85.15 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	5.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	85.15 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	5.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	75.25 %
Thermales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales	2.97 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	75.25 %
Thermaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae	2.97 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	75.25 %
Meiothermus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus	0.99 %
Calidithermus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Calidithermus	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	75.25 %
Calidithermus timidus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Calidithermus → Calidithermus timidus	0.99 %
Meiothermus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus	0.99 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0464478	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	698	Open in IMG/M
3300000596\|KanNP_Total_noBrdU_T14TCDRAFT_1038737	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	537	Open in IMG/M
3300000956\|JGI10216J12902_112989574	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	655	Open in IMG/M
3300002560\|JGI25383J37093_10177900	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	560	Open in IMG/M
3300002562\|JGI25382J37095_10047085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus	1666	Open in IMG/M
3300002562\|JGI25382J37095_10086004	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1146	Open in IMG/M
3300002912\|JGI25386J43895_10095866	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	770	Open in IMG/M
3300004281\|Ga0066397_10147160	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	536	Open in IMG/M
3300005295\|Ga0065707_11008277	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	537	Open in IMG/M
3300005336\|Ga0070680_101814969	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300005343\|Ga0070687_100886992	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	638	Open in IMG/M
3300005345\|Ga0070692_10913391	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	608	Open in IMG/M
3300005552\|Ga0066701_10720936	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	598	Open in IMG/M
3300005558\|Ga0066698_10682654	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	680	Open in IMG/M
3300005719\|Ga0068861_100092512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	2389	Open in IMG/M
3300006049\|Ga0075417_10567300	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	575	Open in IMG/M
3300006606\|Ga0074062_10674745	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	588	Open in IMG/M
3300006796\|Ga0066665_10202113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Calidithermus → Calidithermus timidus	1543	Open in IMG/M
3300006800\|Ga0066660_10406130	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1126	Open in IMG/M
3300006846\|Ga0075430_101120478	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	648	Open in IMG/M
3300006853\|Ga0075420_100598020	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	952	Open in IMG/M
3300006871\|Ga0075434_100083118	All Organisms → cellular organisms → Bacteria	3199	Open in IMG/M
3300006903\|Ga0075426_10560660	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	851	Open in IMG/M
3300006904\|Ga0075424_100834135	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	983	Open in IMG/M
3300006954\|Ga0079219_12250155	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	526	Open in IMG/M
3300007076\|Ga0075435_100801999	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	820	Open in IMG/M
3300007255\|Ga0099791_10288832	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	781	Open in IMG/M
3300009088\|Ga0099830_10017441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae	4591	Open in IMG/M
3300009088\|Ga0099830_11375203	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	587	Open in IMG/M
3300009100\|Ga0075418_10275847	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1791	Open in IMG/M
3300009804\|Ga0105063_1043594	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	621	Open in IMG/M
3300009809\|Ga0105089_1026265	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	812	Open in IMG/M
3300009814\|Ga0105082_1065493	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	637	Open in IMG/M
3300009814\|Ga0105082_1094223	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	558	Open in IMG/M
3300009815\|Ga0105070_1115993	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	536	Open in IMG/M
3300010043\|Ga0126380_11227134	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	648	Open in IMG/M
3300010046\|Ga0126384_11597814	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	614	Open in IMG/M
3300010047\|Ga0126382_11540764	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	613	Open in IMG/M
3300010359\|Ga0126376_11374526	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	730	Open in IMG/M
3300010362\|Ga0126377_10294559	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1598	Open in IMG/M
3300010400\|Ga0134122_12908244	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	533	Open in IMG/M
3300012357\|Ga0137384_10545600	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	949	Open in IMG/M
3300012944\|Ga0137410_10106723	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2084	Open in IMG/M
3300012972\|Ga0134077_10097497	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1135	Open in IMG/M
3300012977\|Ga0134087_10345309	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	710	Open in IMG/M
3300012989\|Ga0164305_11628543	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	577	Open in IMG/M
3300014150\|Ga0134081_10167683	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	730	Open in IMG/M
3300015372\|Ga0132256_100149429	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2342	Open in IMG/M
3300015373\|Ga0132257_100181920	All Organisms → cellular organisms → Bacteria	2480	Open in IMG/M
3300015373\|Ga0132257_100340676	All Organisms → cellular organisms → Bacteria	1810	Open in IMG/M
3300015374\|Ga0132255_100179110	All Organisms → cellular organisms → Bacteria	2983	Open in IMG/M
3300015374\|Ga0132255_102977901	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	723	Open in IMG/M
3300016294\|Ga0182041_11721493	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	580	Open in IMG/M
3300016422\|Ga0182039_11277997	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	664	Open in IMG/M
3300017659\|Ga0134083_10207329	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	811	Open in IMG/M
3300018064\|Ga0187773_10972642	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	554	Open in IMG/M
3300018078\|Ga0184612_10019349	All Organisms → cellular organisms → Bacteria	3491	Open in IMG/M
3300018431\|Ga0066655_10864130	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	617	Open in IMG/M
3300020170\|Ga0179594_10263912	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	650	Open in IMG/M
3300022195\|Ga0222625_1074627	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	525	Open in IMG/M
3300025910\|Ga0207684_10499017	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1043	Open in IMG/M
3300025922\|Ga0207646_10773283	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	856	Open in IMG/M
3300026088\|Ga0207641_10189796	All Organisms → cellular organisms → Bacteria	1888	Open in IMG/M
3300026118\|Ga0207675_101387284	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	723	Open in IMG/M
3300026296\|Ga0209235_1080170	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1459	Open in IMG/M
3300026298\|Ga0209236_1021370	All Organisms → cellular organisms → Bacteria	3609	Open in IMG/M
3300026317\|Ga0209154_1032134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	2406	Open in IMG/M
3300026324\|Ga0209470_1117194	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1185	Open in IMG/M
3300026334\|Ga0209377_1264642	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	567	Open in IMG/M
3300026343\|Ga0209159_1087015	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1391	Open in IMG/M
3300026524\|Ga0209690_1233447	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	578	Open in IMG/M
3300026537\|Ga0209157_1166721	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	972	Open in IMG/M
3300026540\|Ga0209376_1381381	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300027013\|Ga0209884_1027022	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	595	Open in IMG/M
3300027068\|Ga0209898_1002971	All Organisms → cellular organisms → Bacteria	1901	Open in IMG/M
3300027324\|Ga0209845_1053435	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	635	Open in IMG/M
3300027577\|Ga0209874_1068299	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	889	Open in IMG/M
3300027655\|Ga0209388_1023040	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1755	Open in IMG/M
3300027748\|Ga0209689_1362719	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	554	Open in IMG/M
3300027954\|Ga0209859_1013503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	1523	Open in IMG/M
3300027957\|Ga0209857_1025771	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1102	Open in IMG/M
3300028792\|Ga0307504_10179931	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	737	Open in IMG/M
3300028792\|Ga0307504_10476497	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	505	Open in IMG/M
3300031538\|Ga0310888_10310983	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	903	Open in IMG/M
3300031564\|Ga0318573_10656050	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	564	Open in IMG/M
3300031573\|Ga0310915_11130748	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	543	Open in IMG/M
3300031740\|Ga0307468_100006283	All Organisms → cellular organisms → Bacteria	4214	Open in IMG/M
3300031765\|Ga0318554_10376484	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	806	Open in IMG/M
3300031777\|Ga0318543_10466004	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	566	Open in IMG/M
3300031792\|Ga0318529_10453930	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	596	Open in IMG/M
3300031793\|Ga0318548_10212519	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	950	Open in IMG/M
3300031819\|Ga0318568_10407320	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	847	Open in IMG/M
3300031879\|Ga0306919_11163790	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	587	Open in IMG/M
3300031908\|Ga0310900_10755401	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	783	Open in IMG/M
3300031945\|Ga0310913_10950706	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	603	Open in IMG/M
3300031959\|Ga0318530_10463698	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	526	Open in IMG/M
3300032039\|Ga0318559_10444767	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	605	Open in IMG/M
3300032052\|Ga0318506_10366049	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	639	Open in IMG/M
3300032075\|Ga0310890_11072408	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	651	Open in IMG/M
3300032180\|Ga0307471_100351371	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1584	Open in IMG/M
3300032180\|Ga0307471_100895793	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1054	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.16%
Host-Associated	Host-Associated	15.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.18%
Plants	Host-Associated → Plants	15.84%
Aquatic	Environmental → Aquatic	1.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.93%
Freshwater	Environmental → Aquatic → Freshwater	0.99%
Sediment	Environmental → Aquatic → Sediment	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.37%
Sand	Environmental → Terrestrial → Soil → Sand	10.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.92%
Loam	Environmental → Terrestrial → Soil → Loam	6.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.97%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.99%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.99%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.83%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	10.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.99%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.99%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.99%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.89%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	10.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.97%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.99%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.99%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.99%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.99%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.99%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000596	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TC	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300009809	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027013	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027068	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027954	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027957	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_04644781	2228664021	Soil	MALPRSSRVRLVWGLELALGLELYACAVLALHARGLRATPLEASPALVLPALVIPPVFYVLVGLVSLRPLSTLSILGAAAAMCGL
KanNP_Total_noBrdU_T14TCDRAFT_10387372	3300000596	Soil	VWALELALGLELYACAVLALHARGLSATPLLASAGLVIPALVIPPVFYVLVGLVSVRPLSLWRVLVATGAMCGVHTVLVMATGALFVIPDLVDYGAAVAFSLWGSP
JGI10216J12902_1129895741	3300000956	Soil	MPLPRASRARLVWALELSLGLELYACAVLALHARGLRATPLEASPALVLPALVIPPVFYVLVALVSVRPLAVGRMIVSVAAMCGLHALLVAATGALFMVPDLLNYGA
JGI25383J37093_101779001	3300002560	Grasslands Soil	MAIPRASRVRLIWWLELGLGLELYACAVLALHARGLRATPLLAAPALVIPALVIPPVFYLLVGLVSLHPFSLRQVLGAAVAMCGFHALLVAATGALYTIPNL
JGI25382J37095_100470853	3300002562	Grasslands Soil	MAIPRASRVRLIWWLELGLGLELYACAVLALHARGLRATPLLAAPALVIPALVIPALFYLLVGLVSLHPFSLRQVLGAAV
JGI25382J37095_100860041	3300002562	Grasslands Soil	MPFPRASRVKLVWGLELALGLELYACAVLALHARGLRPTPLLASPGLVIPALVIPPVFYVLVGLVSVRPLALGRLMSAAGAMCGVHALLVVATG
JGI25386J43895_100958662	3300002912	Grasslands Soil	MAIPRASRVRLIWWLELGLGLELYACAVLAVHARGLRATPLLAAPALVIPALVIPPLFYLLVGLVSLRPFSLRQVLGAAVAMCGFHALLIAATGALYTIPDLLDFGS
Ga0066397_101471601	3300004281	Tropical Forest Soil	MPFFKSSRAKLVWALELALGLELYACAVLALHARGLRAAPALASAGLVVPALVIPPVFYLLIGLVSVRPLSIWRVLIAAGAMCGVHAVLVM
Ga0065707_110082771	3300005295	Switchgrass Rhizosphere	MALPRSSRVRLVWALELSLGLELYACAVLALHARGLRATPLEASPALVLPALVIPPVFYVLVGLVSVRPLSILSVLGSAAAMCGLHALLVVATGALFMIPD
Ga0070680_1018149692	3300005336	Corn Rhizosphere	MALPRSSRVRLVWALELSLGLELYACAVLALHARGLRATPLEASPALVLPALVIPPVFYVLVGLVSMRPLSILSVLGSAAAMCGLHALLVVATGAL
Ga0070687_1008869922	3300005343	Switchgrass Rhizosphere	MALPRASRARLVWALELSLGLELYACAVLALHARGLRATPLDASLALVLPALVIPPVFYVLVALVIVRPLALVPLIGAAAVMCGLHG
Ga0070692_109133912	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MALPRASRARLVWALELSLGLELYACAVLALHARGLRATPLEASLALVLPALVIPPVFYVLVALVIVRPLALVPLIGAA
Ga0066701_107209361	3300005552	Soil	MRFLRTSRMRLIGWLELGLGLELYACAVLALHARGLKATPLDATPALVLPALVIPPVFYLLVAIVSMRPFSLTRVLGATGAMCGIHAVLVAATGALF
Ga0066698_106826541	3300005558	Soil	MPFPRASRVKLVWGLELALGLELYACAVLALHARGLRATPLLASPGLVIPALVIPPVFYVLVGLVSVRPLALGRLMSAAGAMCGVHALLVVATGALFVI
Ga0068861_1000925124	3300005719	Switchgrass Rhizosphere	MPFFKSSRAKLVWALELALGLELYACAVLALHARGLRATPVLASAGLVVPALVIPPVFYLLIGLVSVRPLSIWRVLIAAGAMCGVHAVLVMATGALFV
Ga0075417_105673002	3300006049	Populus Rhizosphere	LMALPRSSRVRLVWGLELALGLELYACAVLALHARGLRATPLEASPALVLPALVIPPVFYVLVGLVSLRPLSTLSILGAAAAMCGLHALLVVATGALFMIPDVLDYGAA
Ga0074062_106747451	3300006606	Soil	MALPRASRARLVWALELSLGLELYACAVLALHARGLRATPLDASLALVLPALVIPPVFYVLVALVIVRPLALVPLIGATAAM
Ga0066665_102021131	3300006796	Soil	MAWPRSSRVRLVWGLELSLGLELYACAVLALHARGLRATPLEASPALVLPALVIPPVFYVLVGLVSLRPLSIRSVLSAAAAMCGVHALLVMATGALFMMPDFLNYGGAVAFALW
Ga0066660_104061301	3300006800	Soil	MAWPRSSRVRLVWGLELSLGLELYACAVLALHARGLRATPLEASPALVLPALVIPPVFYVLVGLVSLRPLSIRSVLSAAAAMCGVHALLVMATGALFMMPDFLNY
Ga0075430_1011204782	3300006846	Populus Rhizosphere	MAWLRAARVKMVWALELALGLELYACAVLALHARGLRATPLEASLALVLPALVIPPVFYVLVGLVSVRPRSIVSVGSAAASMSAVHAMLVVSTGALFMIPD
Ga0075420_1005980201	3300006853	Populus Rhizosphere	MPFFKSSRAKLVWALELALGLELYACAVLALHARGLRATPVLASAGLVVPALVIPPVFYLLIGLVSVRPLSIWRVLIAA
Ga0075434_1000831184	3300006871	Populus Rhizosphere	MALPRASRARLVWALELSLGLELYACAVLALHARGLRATPLEASPALVLPALVIPPVFYVLVALVIVRPLSLTPLIVAAATMCGLHGLLVAATGALFMIPDLVEYGA
Ga0075426_105606601	3300006903	Populus Rhizosphere	MALPRASRARLVWALELSLGLEVYACAVLALHARGLRATPLDASLALVLPALVIPPVFYVLVALVIVRPLALLPLIGAA
Ga0075424_1008341351	3300006904	Populus Rhizosphere	MALPRASRARLVWALELSLGLELYACAVLALHARGLRATPLEASLALVLPALVIPPVFYVLVALVIVRPLALMPLIGAAAIMCGLHGVLVAATGALFMIPDLVEYGA
Ga0079219_122501551	3300006954	Agricultural Soil	MALLRASRARLVWALELSLGLELYACAVLALHARGLRATPLEASPALVLPALVIPPVFYVLVALVIVRPLSLMPLIVAAATMC
Ga0075435_1008019991	3300007076	Populus Rhizosphere	MGWLRAARRKMVWALELSLGLELYACAVLALHARGLRATPLEASPALVLPALVIPPVFYVLVGLVSVRPLSIVSVASAAAAM
Ga0099791_102888322	3300007255	Vadose Zone Soil	MAIPRASRVRLIWWLELGLGLELYACAVLAVHARGLRATPLLAAPALVIPALVIPPLFYLLVGLVSLRPFSLRQVLGAAVAMCGFHALLV
Ga0099830_100174411	3300009088	Vadose Zone Soil	MAIPRASRVRLIWWLELGLGLELYACAVLAVHARGLRATPLLAAPALVIPALVIPPLFYLLVGLVSLRPFSLRQVLGAAVAMCGFHALLIAATGALYTIPDLLDFGSAVAFA
Ga0099830_113752031	3300009088	Vadose Zone Soil	VKLVWGLELALGLELYACAVLALHARGLRATPLLASPGLVIPALVIPPVFYVLVGLVSVRPRSLVRVMSAVGAMCGVHALLVAATGA
Ga0075418_102758471	3300009100	Populus Rhizosphere	MAWLRAARVKMVWALELALGLELYACAVLALHARGLRATPLEASLALVLPALVIPPVFYVLVGLVSVRPRSIVSVGSAAASMSAVHAMLVVSTGALFMIPDLV
Ga0105063_10435942	3300009804	Groundwater Sand	MAIPRASRVRLIWWLELGLGLELYACAVLALHARGLRATPLLAAPSLVIPALVIPPVFYLLVGLVSLRPFSLRRVLGAAVAMCGLHALLVAA
Ga0105089_10262652	3300009809	Groundwater Sand	MAIPRASRVRLIWWLELGLGLELYACAVLALHARGLRATPLLAAPSLVIPALVIPPVFYVLVGLISMRPLSMSRVFGAAAAMCGLHTLLVVVTGALYTI
Ga0105082_10654932	3300009814	Groundwater Sand	MRLIWWLELGLGLELYACAVLALHARGLRATPLMAAPSLVIPALVIPPVFYVLVGLISMRPLSMSRVFGAAAAMCGLHTLLVVVTGALYTIPDLVDFGDAVAFALWGS
Ga0105082_10942231	3300009814	Groundwater Sand	MAIPRASRVRLIWWLELGLGLELYACAVLALHARGLRATPLLAAPSLVIPALVIPPVFYLLVGLVSLRPFSLRRVLGAAVAMCGLHALLVAATGAL
Ga0105070_11159932	3300009815	Groundwater Sand	MAIPRASRVRLIWWLELGLGLELYACAVLALHARGLRATPLVAAPSLVIPALVIPPVFYLLVGLVSLRPFSLRRVLGAAVAMCGLHALLVAATGALYTI
Ga0126380_112271342	3300010043	Tropical Forest Soil	MPLLRASRARLVWALELSLGLELYACAVLALHARGLRATPLEASLALVLPALVIPPVFYVLVALVSVRPLALAPMIVSVATMCVLHAML
Ga0126384_115978141	3300010046	Tropical Forest Soil	MALTRATRSKLVWALELALGLELYACAVLALHSRGLRATPIVASPGLIIPALVIPPVFYVLVGLVSVRPLSVVRIGIAASALCAVHAVLVMATGALF
Ga0126382_115407641	3300010047	Tropical Forest Soil	MGLLRSSRVRLVWALELGLGLELYACAVLALHARGLRATPLEASPALVLPALVIPPVFYVLVGLVSVRPLSIRSVLDSAAVMCGLHALLVVATGAL
Ga0126376_113745261	3300010359	Tropical Forest Soil	MPLFKSSRAKLVWALELALGLELYACAVLALHARGLRAAPALASAGLVVPALVIPPVFYLLIGLVSVRPLSIWRVLIAAGAMCGVHAVLVMATGALFVIP
Ga0126377_102945593	3300010362	Tropical Forest Soil	MPLFKSSRAKLVWALELALGLELYACAVLALHARGLRAAPALASAGLVVPALVIPPVFYLLIGLVSVRPLSIWRVLIAAGAMCGVHAVLVMATGALFVIPDLVDY
Ga0134122_129082442	3300010400	Terrestrial Soil	MPFFKSSRAKLVWALELALGLELYACAVLALHARGLRATPVLASAGLVVPALVIPPVFYLLIGLVSVRPLSIWRVLIAAG
Ga0137384_105456002	3300012357	Vadose Zone Soil	LVWALELSLGLELYACAVLALHAHGLRATPLEASLALVLPALVIPPVFYVLAALVLVRPLALMPLIGAAAAMCGHTPIAASSRWLDSA
Ga0137410_101067234	3300012944	Vadose Zone Soil	MAVPRASRVRLIWWLELGLGLELYACAVLALHARGLRATPLLAAPALVIPALVIPALVIPPVFYLLVGLVSLRPFSLRQVLGAAVAMCGFHALLVAATGA
Ga0134077_100974972	3300012972	Grasslands Soil	MAIPRASRVRLIWWLELGLVLELYACAVLALHARGLRATPLLAAPSLVIPALVIPPVFYLLAGLVSLRPFSLRRVVGAAVAMCGL
Ga0134087_103453092	3300012977	Grasslands Soil	MAWPRSSRVRLVWALELSLGLELYACAVLTLHARGLRATPLEASPALVLPALVIPPVFYVLVGLVSVRPLSIRSVLGAAA
Ga0164305_116285431	3300012989	Soil	LVWALELSLGLELYACAVLALHARGLRATPLDASLALVLPALVIPPVFYVLVALVIVRPLALAPLIGAAAAMCGLHGLLVAATGALFM
Ga0134081_101676831	3300014150	Grasslands Soil	MAWPRSSRVRLVWALELSLGLELYACAVLALHARGLRATPLEASPALVLPALVIPPVFYVLVGLVSLRPLSIRSVLSAAAAMCGLHALLVMATGAL
Ga0132256_1001494291	3300015372	Arabidopsis Rhizosphere	MPFFKSSRTKLVWALELALGLELYACAVLALHARGLRATPVLASAGLVVPALVIPPVFYLLVGLVSVRPLSIWRVLIAAGAMCGVHAVLVMAT
Ga0132257_1001819201	3300015373	Arabidopsis Rhizosphere	MALPRSSRVRLVWALELSLGLELYACAVLALHARGLRATPLEASPALVLPALVIPPVFYVLVGLVSVRPLSVLSVLGSAAAMCGLHVLLVVATGALFMIPDLLDYGAAVAFS
Ga0132257_1003406763	3300015373	Arabidopsis Rhizosphere	LVWALELSLGLELYACAVLALHARGLRATPLDASLALVLPALVIPPVFYVLVALVIVRPLALAPLIGAAAAMCGLHGLLVAATGALFMIPDLLDYGAAV
Ga0132255_1001791104	3300015374	Arabidopsis Rhizosphere	MPFFKSSRTKLVWALELALGLELYACAVLALHARGLRATPVLASAGLVVPALVIPPVFYLLIGLVSVRPLSIWRVLIAAGAMCGVPAVLVMATGALFVIPDL
Ga0132255_1029779011	3300015374	Arabidopsis Rhizosphere	LVWALELSLGLELYACAVLALHARGLRATPLEASLALVLPALVIPPVFYVLVALVIVRPLALVPLIGAAVAMCGLHGLLVAATGALFM
Ga0182041_117214931	3300016294	Soil	MALSRGSRARLVRALELSLGLELYACAVLALHARGLRATPLEASPALVLPAVVIPPVFYLLVALVIVRPLAVVPLIRAAAVMCGLHGL
Ga0182039_112779971	3300016422	Soil	MALSRGSRARLVRVLELSLGLELYACAVLALHARGLRATPLEASPALVLPAVVIPPVFYLLVALVIVRPLAVVPLIRAAAVMCGLHGLLVAATGALFMIPDLLDYGA
Ga0134083_102073291	3300017659	Grasslands Soil	MAIRRASRVRLIWWLELGLGLELYACGVLVLHARGLRATPLLAAPSLVIPALVIPPVFYLLVGLVSLRSFSLRRVLGAAVAMCG
Ga0187773_109726421	3300018064	Tropical Peatland	MALPRASRARLVWALELSLGLELYACAVLALHARGLRATPLEASPALVLPALVIPPVFYVLVALVIVRPLALPPLVVAAATMSGIHGVL
Ga0184612_100193494	3300018078	Groundwater Sediment	MPLPRTSRVKLVWGLELALGLELYACAVLALHARGLRATPLLATPGLVIPALVIPPVFYMLVGLVSVRPRSLVRVMSAVGAMCGVHALLVAATGALFVIPAFVDYG
Ga0066655_108641302	3300018431	Grasslands Soil	MPLPRAARARLVWALELSLGLELYACAVLALHARGLRATPLEASAALVLPALVIPPVFYVLVALVSVRPFVLAPAIGAVAAMCGLHGLLV
Ga0179594_102639121	3300020170	Vadose Zone Soil	MAFPRASRVRLVWGLELALGLELYACAVLALHARGLRATPLEASPGLVLPALVIPPVFYVLVGLVSVRPLSLMPVLGAAAAMCGLHGLLVVATGGLL
Ga0222625_10746271	3300022195	Groundwater Sediment	MAIPRASRVRLIWWLELGLGLELYACAVLALHARGLRATPLLAAPALVIPALVIPALVIPPVFYLLVGLVSLRPFSLRQVLGAAVAMCG
Ga0207684_104990172	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAWPRSSRVRLVWALELSLGLELYACAVLALHARGLRAIPLEASPALVLPALVIPPVFYVLVGLVGVRPLSIRSVLGAAATMCGVHALLVVATGALF
Ga0207646_107732832	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAWPRSSRVRLVWGLELSLGLELYACAVLALHARGLRATPLEASPALVLPALVIPPVFYVLVGLVSLRPLSIRSVLGGAAAMCGI
Ga0207641_101897963	3300026088	Switchgrass Rhizosphere	MALPRASRARLVWALELSLGLELYACAVLALHARGLRATPLEASLALVLPALVIPPVFYVLVALVIVRPPALMPLIGAAATMCGLHGVLVAATG
Ga0207675_1013872842	3300026118	Switchgrass Rhizosphere	MPFFKSSRAKLVWALELALGLELYACAVLALHARGLRATPVLASAGLVVPALVIPPVFYLLIGLVSVRPLSIWRVLIAAGAMCGVHAVLVMATGALFVIPDLVDYGA
Ga0209235_10801701	3300026296	Grasslands Soil	MAIPRASRVRLIWWLELGLGLELYACAVLALHARGLRATPLLAAPALVIPALVIPPVFYLLVGLVSLHPFSLRQVLGAAVAMCGFHALLVAATGALYTIPNLLDFGS
Ga0209236_10213704	3300026298	Grasslands Soil	VWGLELALGLELYACAVLALHARGLRPTPLLASPGLVIPALVIPPVFYVLVGLVSVRPLALGRLMSAAGAMCGVHALLVVATGALFVIPDLVDYGAAVAFSLWGSP
Ga0209154_10321344	3300026317	Soil	MAWPRSSRVRLVWALELSLGLELYACAVLALHARGLRATPLEASPALVLPALVIPPVFYVLVGLVSVRPLSIRLVLGAAATMCGVHAVLVVATGALFMIPDLLNYGAAVAFAL
Ga0209470_11171942	3300026324	Soil	MAIRRASRVRLIWWLELGLGLELYACGVLVLHARGLRATPLLAAPSLVIPALVIPPVFYLLVGLVSLRPFSLRRVLGAAVAMCGLHALLVAATGALYTISDLLDFGS
Ga0209377_12646421	3300026334	Soil	MPLPRGSRARVVWALELALGLELYACAVLALHVRGLRATPLEASAALVLPALVIPPVFYVLVSLVSVRPLSLGAVSVAVAAMCVLHGLLVAATGALF
Ga0209159_10870151	3300026343	Soil	MSFLRASRAKLVWALELALGLELYACAVLALHARGLRATPLLASPGLVIPALVIPPVFYVLVGLVSVRPLSVSRVIMATGALCGVHAVLVMATGALFVIPDL
Ga0209690_12334472	3300026524	Soil	MPFPRASRVKLVWGLELALGLELYACAVLALHARGLRPTPLLASPGLVIPALVIPPVFYVLVGLVSVRPLALGRLMSAAGAMCGVHALLVVATGAL
Ga0209157_11667211	3300026537	Soil	MSFLRASRAKLVWALELALGLELYACAVLALHARGLRATPLLASPGLVIPALVIPPVFYVLVGLVSVRPLSVSRVIMATGALCGVHAVLVMATGAL
Ga0209376_13813811	3300026540	Soil	MAIRRASRVRLIWWLELGLGLELYACGVLVLHARGLRATPLLAAPSLVIPALVIPPVFYLLVGLVSLRPFSLRRVLGAAVAMCG
Ga0209884_10270221	3300027013	Groundwater Sand	MAIPRASRVRLIWWLELGLGLELYACAVLALHARGLRATPLLAAPSLVIPALVIPPVFYLLVGLVSLRPFSLRRVLGAAVAMCGLHA
Ga0209898_10029713	3300027068	Groundwater Sand	MAFPRPSRMRLIWWLELGLGLELYACAVLALHARGLRATPLMAAPSLVIPALVIPPVFYVLVGLISMRPLSMSRVFGAAAAMCGLHTLLVVVTGAL
Ga0209845_10534351	3300027324	Groundwater Sand	MAIPRASRVRLIWWLELGLGLELYACAVLALHARGLRATPLLAAPSLVIPALVIPPVFYLLVGLVSLRPFSLRQVLGAAVAMCG
Ga0209874_10682991	3300027577	Groundwater Sand	MAIPRASRVRLIWWLELGLGLELYACAVLVLHARGLRATPLMAAPSLVIPALVIPPVFYVLVGLISMRPVSMSRVFGAAAAMCGLHTLLVVVTGALYTIPDLVDFG
Ga0209388_10230403	3300027655	Vadose Zone Soil	MSFLRASRAKLVWALELALGLELYACAVLALHARGLRATPVLASAGLVIPALVIPPVFYVLVGLVSVRPLSAWRVSIATGAMCGVHAVLVMATGALFVIPDLVDYGAAVAFSL
Ga0209689_13627192	3300027748	Soil	MPFPRASRVKLVWGLELALGLELYACAVLALHARGLRPTPLLASPGLVIPALVIPPVFYVLVGLVSVRPLALGRLMSAAGAMCGVH
Ga0209859_10135033	3300027954	Groundwater Sand	MAIPRASRVRLIWWLELGLGLELYACAVLALHAHGLRATPQLAAPALVIPALVIPPLAIPPVFYLLVGIVSLRPFSLRRVLGAAVVMCGLHTL
Ga0209857_10257712	3300027957	Groundwater Sand	MAIPRASRVRLIWWLELGLGLELYACAVLALHARGLRATPLLAAPSLVIPALVIPPVFYLLVGLVSMRPLSLPRVLGAAAAMCGLHALLVVATGALYTIPDLV
Ga0307504_101799312	3300028792	Soil	MSFLRASRVKLVWALELALGLELYACAVLALHARGLRTAPLLASPGLVVPALVIPPVFYVLVGLVSVRPLSVWRVLIATGAMCGVHAALVMATGALFVI
Ga0307504_104764972	3300028792	Soil	MALPRASRARLVWALELSLGLELYACAVLALHARGLRATPLEASLALVLPALVIPPVFYVLAALVLVRPLALVPLIGAAAVMC
Ga0310888_103109831	3300031538	Soil	MALPRASRARLVWALELSLGLELYACAVLALHARGLRATPLDASLALVLPALVIPPVFYVLVALVIVRPLALAPLIGAAAAMCGLHGLLVAATGALFMIPDLLDYGAAVAF
Ga0318573_106560501	3300031564	Soil	MPLPRAVRARLVWALELSLGLELYACAVLALHARGLRATPLEASLALVLPALVIPPVFYLLVGLVSIRPLALAPMIVSVATMCALH
Ga0310915_111307482	3300031573	Soil	MPLPRAVRARLVWALELSLGLELYACAVLALHARGLRATPLEASLALVLPALVIPPVFYLLVGLVSIRPLALAPMIVSVATMCALHAMLVLATGALFMVTDLLGYG
Ga0307468_1000062834	3300031740	Hardwood Forest Soil	MPFFKSSRAKLVWALELALGLELYACAVLALHARGLRATPVLASAGLVVPALVIPPVFYLLIGLVSVRPLSIWRVLIAAGAMCGVHAVLVMATGAL
Ga0318554_103764843	3300031765	Soil	MALSRGSRARLVWALELSLGLELYACAVLALHARGLRATPLEASPALVLPALVIPPVFYLLVGLVIVRPLAVVPLIRAAAVMCGLHGLLVAAT
Ga0318543_104660042	3300031777	Soil	MPLPRAVRARLVWALELSLGLELYACAVLALHARGLRATPLEASLALVLPALVIPPVFYLLVGLVSIRPLALAPMIVSVATMCALHAMLVLATGALFMITD
Ga0318529_104539302	3300031792	Soil	MPLPRAVRARLVWALELSLGLELYACAVLALHARGLRATPLEASLALVLPALVIPPVFYLLVGLVSIRPLALAPMIVSVATMCALHAMLVLATGALFMVT
Ga0318548_102125191	3300031793	Soil	MALSRGSRARLVRVLELSLGLELYACAVLALHARGLRATPLEASPALVLPAVVIPPVFYLLVALVIVRPLAVVPLIRAAAVMCGLH
Ga0318568_104073202	3300031819	Soil	MALSRGSRARLVRALELSLGLELYACAVLALHARGLRATPLEASPALVLPAVVIPPVFYLLVALVIVRPLAVVPLIRAAAVMCGLHG
Ga0306919_111637902	3300031879	Soil	MALSRGSRARLVRVLELSLGLELYACAVLALHARGLRATPLEASPALVLPAVVIPPVFYLLVALVIVRPLAVVPLIRAAAVMCGLHGLLVAATGALFMIPDLL
Ga0310900_107554011	3300031908	Soil	MALPRASRARLVWALELSLGLELYACAVLALHARGLRATPLDASLALVLPALVIPPVFYVLVALVIVRPLALAPLIGAAAAMCGLHGLLVAATGALFMIPDLLD
Ga0310913_109507061	3300031945	Soil	MPLPRAVRARLVWALELSLGLELYACAVLALHARGLRATPLEASLALVLPALVIPPVFYLLVGLVSIRPLALAPMIVSVATMCALHAMLV
Ga0318530_104636981	3300031959	Soil	MPLPRAVRARLVWALELSLGLELYACAVLALHARGLRATPLEASLALVLPALVIPPVFYLLVGLVSIRPLALAPMIVSVATMCALHAMLVLATGALFMVTDLLGYGGAVA
Ga0318559_104447671	3300032039	Soil	MPLPRAVRARLVWALELSLGLELYACAVLALHARGLRATPLEASLALVLPALVIPPVFYLLVGLVSIRPLALAPMIVSVATMCALHAMLVLATGALFMITDLLGYG
Ga0318506_103660491	3300032052	Soil	MPLPRAVRARLVWALELSLGLELYACAVLALHARGLRATPLEASLALVLPALVIPPVFYLLVGLVSIRPLALAPMIVSVATMCALHAMLVLATGALFMVTDLLGYGGAVAPSV
Ga0310890_110724082	3300032075	Soil	MALPRASRARLVWALELSLGLELYACAVLALHARGLMATPLDASLALVLPALVIPPVFYVLVALVIVRPLALAPLIGAAAAMCGLHG
Ga0307471_1003513713	3300032180	Hardwood Forest Soil	MPLPRASRARLVWALELSLGLELYACAVLALHARGLKATPLEASPALVLPALVIPPVFYVLVALVSVRPLSLAPALGAVAAMCGLHG
Ga0307471_1008957931	3300032180	Hardwood Forest Soil	LMALPRSSRVRLVWGLELALGLELYACAVLALHARGLRATPLEASPALVLPALVIPPVFYVLVGLVSVRPRSILSITGAAVAMCGLHA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103191

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences