Metagenome Family F103291

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103291
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	106 residues
Representative Sequence	MEIFGLSPVVATLTIVSSGVVLQNLLGWLKSKEDYNTRSALASAIIAFVVGITIIGPQIEAIQDQMLSDLSELTIVASLIASIAGFDVLTKNVFKIANQKINLQNKPV
Number of Associated Samples	45
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.97 %
% of genes near scaffold ends (potentially truncated)	18.81 %
% of genes from short scaffolds (< 2000 bps)	74.26 %
Associated GOLD sequencing projects	40
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (49.505 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment (27.723 % of family members)
Environment Ontology (ENVO)	Unclassified (27.723 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (62.376 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.97% β-sheet: 1.47% Coil/Unstructured: 34.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00583	Acetyltransf_1	3.96
PF00413	Peptidase_M10	3.96
PF03685	UPF0147	3.96
PF08271	TF_Zn_Ribbon	2.97
PF00355	Rieske	2.97
PF13660	DUF4147	1.98
PF00920	ILVD_EDD	1.98
PF01230	HIT	1.98
PF00188	CAP	0.99
PF00582	Usp	0.99
PF01555	N6_N4_Mtase	0.99
PF04248	NTP_transf_9	0.99
PF13462	Thioredoxin_4	0.99
PF00127	Copper-bind	0.99
PF05201	GlutR_N	0.99
PF07681	DoxX	0.99
PF04909	Amidohydro_2	0.99
PF13181	TPR_8	0.99
PF01171	ATP_bind_3	0.99
PF00079	Serpin	0.99
PF01872	RibD_C	0.99
PF01259	SAICAR_synt	0.99
PF00551	Formyl_trans_N	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	3.96
COG1698	Uncharacterized conserved protein, UPF0147 family	Function unknown [S]	3.96
COG5549	Predicted Zn-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	3.96
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	0.99
COG0152	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Nucleotide transport and metabolism [F]	0.99
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.99
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.99
COG0373	Glutamyl-tRNA reductase	Coenzyme transport and metabolism [H]	0.99
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	0.99
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	0.99
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.99
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.99
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.99
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	0.99
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.99
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.99
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.99
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	0.99
COG2343	Uncharacterized conserved protein, DUF427 family	Function unknown [S]	0.99
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.99
COG4826	Serine protease inhibitor	Posttranslational modification, protein turnover, chaperones [O]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.50 %
Unclassified	root	N/A	49.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	49.50 %
Unclassified	root	N/A	49.50 %
Viruses	superkingdom	All Organisms → Viruses	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	43.56 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	25.74 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	5.94 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	25.74 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	4.95 %
archaeon MnTg01	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon MnTg01	0.99 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	23.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4.95 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.99 %
Thaumarchaeota incertae sedis	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis	0.99 %
archaeon MnTg01	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon MnTg01	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Nitrosopumilaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	23.76 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	4.95 %
Candidatus Nitrosopelagicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus	0.99 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.99 %
archaeon MnTg01	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon MnTg01	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Nitrosopumilus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	23.76 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	4.95 %
unclassified Candidatus Nitrosopelagicus	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus	0.99 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.99 %
archaeon MnTg01	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon MnTg01	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Candidatus Nitrosopumilus sediminis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	6.93 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	4.95 %
Candidatus Nitrosopelagicus sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	0.99 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.99 %
archaeon MnTg01	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon MnTg01	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Candidatus Nitrosopumilus sediminis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	6.93 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	4.95 %
Candidatus Nitrosopelagicus sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	0.99 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.99 %
archaeon MnTg01	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon MnTg01	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002231\|KVRMV2_100498221	All Organisms → cellular organisms → Archaea	2288	Open in IMG/M
3300003847\|Ga0055582_1009759	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1831	Open in IMG/M
3300003847\|Ga0055582_1055679	Not Available	644	Open in IMG/M
3300004074\|Ga0055518_10001132	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	3227	Open in IMG/M
3300004150\|Ga0055520_10025628	All Organisms → cellular organisms → Archaea	1009	Open in IMG/M
3300004150\|Ga0055520_10036529	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	903	Open in IMG/M
3300006420\|Ga0082248_10116209	Not Available	512	Open in IMG/M
3300006900\|Ga0066376_10812479	Not Available	504	Open in IMG/M
3300008470\|Ga0115371_10029119	All Organisms → cellular organisms → Archaea	1880	Open in IMG/M
3300008470\|Ga0115371_10529768	Not Available	563	Open in IMG/M
3300008470\|Ga0115371_10902642	Not Available	625	Open in IMG/M
3300009139\|Ga0114949_10266375	All Organisms → cellular organisms → Archaea	1364	Open in IMG/M
3300009139\|Ga0114949_10935144	All Organisms → cellular organisms → Archaea	692	Open in IMG/M
3300009481\|Ga0114932_10024544	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	4090	Open in IMG/M
3300010392\|Ga0118731_100570738	Not Available	591	Open in IMG/M
3300010392\|Ga0118731_102476156	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1708	Open in IMG/M
3300010392\|Ga0118731_105069734	Not Available	516	Open in IMG/M
3300010392\|Ga0118731_107673208	Not Available	549	Open in IMG/M
3300010392\|Ga0118731_108807573	Not Available	832	Open in IMG/M
3300010392\|Ga0118731_109162097	Not Available	1062	Open in IMG/M
3300010392\|Ga0118731_109594450	Not Available	746	Open in IMG/M
3300010392\|Ga0118731_112684556	Not Available	543	Open in IMG/M
3300010430\|Ga0118733_101097152	Not Available	1589	Open in IMG/M
3300010430\|Ga0118733_101876009	Not Available	1192	Open in IMG/M
3300010430\|Ga0118733_102279950	Not Available	1073	Open in IMG/M
3300010430\|Ga0118733_103367265	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	870	Open in IMG/M
3300010430\|Ga0118733_103495077	Not Available	852	Open in IMG/M
3300010430\|Ga0118733_105188493	Not Available	688	Open in IMG/M
3300010967\|Ga0139247_1011943	Not Available	913	Open in IMG/M
3300010967\|Ga0139247_1035590	All Organisms → cellular organisms → Archaea	945	Open in IMG/M
3300010967\|Ga0139247_1056199	Not Available	848	Open in IMG/M
3300010968\|Ga0139250_1016120	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon MnTg01	1304	Open in IMG/M
3300011125\|Ga0151663_1013099	All Organisms → cellular organisms → Archaea	2519	Open in IMG/M
3300011256\|Ga0151664_1030861	All Organisms → cellular organisms → Archaea	1129	Open in IMG/M
3300011259\|Ga0151662_1002020	All Organisms → cellular organisms → Archaea	1001	Open in IMG/M
3300011261\|Ga0151661_1050773	All Organisms → cellular organisms → Archaea	646	Open in IMG/M
3300013098\|Ga0164320_10022576	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	2449	Open in IMG/M
3300022201\|Ga0224503_10000142	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	19929	Open in IMG/M
3300022201\|Ga0224503_10004031	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	4256	Open in IMG/M
3300022201\|Ga0224503_10006807	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	3273	Open in IMG/M
3300022201\|Ga0224503_10006917	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	3251	Open in IMG/M
3300022201\|Ga0224503_10328453	Not Available	510	Open in IMG/M
3300022202\|Ga0224498_10132572	Not Available	727	Open in IMG/M
3300022205\|Ga0224511_10080219	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	3553	Open in IMG/M
3300022209\|Ga0224497_10000032	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	123593	Open in IMG/M
3300022209\|Ga0224497_10001795	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	13271	Open in IMG/M
3300022209\|Ga0224497_10001803	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	13248	Open in IMG/M
3300022209\|Ga0224497_10003525	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	8748	Open in IMG/M
3300022209\|Ga0224497_10113986	Not Available	1094	Open in IMG/M
3300022218\|Ga0224502_10202665	Not Available	762	Open in IMG/M
3300022218\|Ga0224502_10382314	Not Available	546	Open in IMG/M
3300022220\|Ga0224513_10124739	Not Available	991	Open in IMG/M
3300022221\|Ga0224506_10011034	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	5209	Open in IMG/M
3300022221\|Ga0224506_10154724	All Organisms → cellular organisms → Archaea	1076	Open in IMG/M
3300022221\|Ga0224506_10165590	All Organisms → cellular organisms → Archaea	1033	Open in IMG/M
3300022223\|Ga0224501_10008526	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	8087	Open in IMG/M
3300022226\|Ga0224512_10339640	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	747	Open in IMG/M
3300022226\|Ga0224512_10511119	Not Available	586	Open in IMG/M
3300022413\|Ga0224508_10010253	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	7073	Open in IMG/M
3300022413\|Ga0224508_10064805	Not Available	2474	Open in IMG/M
3300022413\|Ga0224508_10111282	All Organisms → cellular organisms → Archaea	1825	Open in IMG/M
3300022413\|Ga0224508_10158229	Not Available	1492	Open in IMG/M
3300022413\|Ga0224508_10167718	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1443	Open in IMG/M
3300022413\|Ga0224508_10502100	Not Available	756	Open in IMG/M
3300022413\|Ga0224508_10723437	Not Available	609	Open in IMG/M
(restricted) 3300024059\|Ga0255040_10312049	Not Available	659	Open in IMG/M
3300024060\|Ga0209987_10420449	Not Available	727	Open in IMG/M
(restricted) 3300024338\|Ga0255043_10288202	Not Available	569	Open in IMG/M
3300024344\|Ga0209992_10048723	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	2038	Open in IMG/M
(restricted) 3300024521\|Ga0255056_10218351	Not Available	842	Open in IMG/M
3300025883\|Ga0209456_10025644	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	2650	Open in IMG/M
3300025883\|Ga0209456_10035134	Not Available	2258	Open in IMG/M
3300025883\|Ga0209456_10058615	Not Available	1727	Open in IMG/M
3300025883\|Ga0209456_10108978	Not Available	1220	Open in IMG/M
3300025883\|Ga0209456_10144033	All Organisms → Viruses → Predicted Viral	1035	Open in IMG/M
3300025895\|Ga0209567_10033978	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	2351	Open in IMG/M
3300025895\|Ga0209567_10038642	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	2201	Open in IMG/M
3300025895\|Ga0209567_10103567	Not Available	1321	Open in IMG/M
3300025970\|Ga0210081_1000801	Not Available	3683	Open in IMG/M
3300026024\|Ga0210130_1003138	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1669	Open in IMG/M
3300026352\|Ga0210107_1074131	Not Available	550	Open in IMG/M
(restricted) 3300027837\|Ga0255041_10145952	All Organisms → cellular organisms → Archaea	812	Open in IMG/M
(restricted) 3300027837\|Ga0255041_10161632	Not Available	776	Open in IMG/M
(restricted) 3300028043\|Ga0233417_10187494	Not Available	905	Open in IMG/M
3300028598\|Ga0265306_10183028	Not Available	1107	Open in IMG/M
3300028598\|Ga0265306_10480106	Not Available	680	Open in IMG/M
3300028599\|Ga0265309_10029344	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	2927	Open in IMG/M
3300028599\|Ga0265309_10082632	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1867	Open in IMG/M
3300028599\|Ga0265309_10157139	All Organisms → cellular organisms → Archaea	1397	Open in IMG/M
3300028599\|Ga0265309_10238308	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1151	Open in IMG/M
3300028599\|Ga0265309_10633786	Not Available	721	Open in IMG/M
3300028600\|Ga0265303_10110300	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2030	Open in IMG/M
3300028600\|Ga0265303_10376191	All Organisms → cellular organisms → Archaea	1124	Open in IMG/M
3300028600\|Ga0265303_10625900	All Organisms → cellular organisms → Archaea	874	Open in IMG/M
3300028600\|Ga0265303_10738250	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	805	Open in IMG/M
3300028600\|Ga0265303_11243133	Not Available	620	Open in IMG/M
3300028600\|Ga0265303_11276685	Not Available	611	Open in IMG/M
3300028600\|Ga0265303_11877012	Not Available	502	Open in IMG/M
3300032274\|Ga0316203_1203243	Not Available	545	Open in IMG/M
3300032277\|Ga0316202_10123715	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	1199	Open in IMG/M
3300032277\|Ga0316202_10139715	Not Available	1124	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	96.04%
Sediment	Environmental → Aquatic → Sediment	2.97%
Freshwater	Environmental → Aquatic → Freshwater	0.99%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Marine → Sediment	27.72%
Coastal	Environmental → Aquatic → Marine → Coastal	20.79%
Subtidal Zone	Environmental → Aquatic → Marine → Subtidal Zone	13.86%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	9.90%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.94%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	5.94%
Oceanic	Environmental → Aquatic → Marine → Oceanic	3.96%
Strait	Environmental → Aquatic → Marine → Strait	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.97%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.98%
Lake	Environmental → Aquatic → Freshwater → Lake	0.99%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.99%
Gulf	Environmental → Aquatic → Marine → Gulf	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	27.72%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	20.79%
Sediment	Environmental → Aquatic → Marine → Subtidal Zone → Sediment	13.86%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	9.90%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	5.94%
Microbial Mats	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats	3.96%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	3.96%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	2.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.97%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	1.98%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.99%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Marine → Gulf → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	27.72%
Sediment	Environmental → Aquatic → Marine → Subtidal Zone → Sediment → Sediment	13.86%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	9.90%
Marine	Environmental → Aquatic → Marine → Coastal → Sediment → Marine	7.92%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	5.94%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	5.94%
Marine	Environmental → Aquatic → Marine → Coastal → Sediment → Marine	3.96%
Hydrothermal Chimney Microbial Mat	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Hydrothermal Chimney Microbial Mat	3.96%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	3.96%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	2.97%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	2.97%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	2.97%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	1.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.99%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.99%
Sediment	Environmental → Aquatic → Marine → Unclassified → Unclassified → Sediment	0.99%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.99%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.99%
Seawater	Environmental → Aquatic → Marine → Gulf → Unclassified → Seawater	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300003847	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_11	Environmental	Open in IMG/M
3300004074	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqA_D1	Environmental	Open in IMG/M
3300004150	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqC_D1	Environmental	Open in IMG/M
3300006420	Deep-sea sediment bacterial and archaeal communities from Fram Strait - Hausgarten IV	Environmental	Open in IMG/M
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental	Open in IMG/M
3300008470	Sediment core microbial communities from Adelie Basin, Antarctica. Combined Assembly of Gp0136540, Gp0136562, Gp0136563	Environmental	Open in IMG/M
3300009139	Deep subsurface microbial communities from Kermadec Trench to uncover new lineages of life (NeLLi) - N074 metaG	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300010392	Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385	Environmental	Open in IMG/M
3300010430	Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samples	Environmental	Open in IMG/M
3300010967	Microbial communities from the inside layer of the microbial mat covering an inactive hydrothermal chimney from the Kolumbo submarine volcano, Santorini, Greece - V16_c.in	Environmental	Open in IMG/M
3300010968	Microbial communities from the middle layer of the microbial mat covering an inactive hydrothermal chimney from the Kolumbo submarine volcano, Santorini, Greece - V16_c.mid	Environmental	Open in IMG/M
3300011125	Marine sediment microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_4, permeate	Environmental	Open in IMG/M
3300011256	Marine sediment microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_4, total	Environmental	Open in IMG/M
3300011259	Marine sediment microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_4, 0.2	Environmental	Open in IMG/M
3300011261	Marine sediment microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_4, 0.02	Environmental	Open in IMG/M
3300013098	Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay11, Core 4567-28, 0-3 cm	Environmental	Open in IMG/M
3300022201	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_21	Environmental	Open in IMG/M
3300022202	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_21	Environmental	Open in IMG/M
3300022205	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_8_1	Environmental	Open in IMG/M
3300022209	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_13	Environmental	Open in IMG/M
3300022218	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_13	Environmental	Open in IMG/M
3300022220	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_21	Environmental	Open in IMG/M
3300022221	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_8_1	Environmental	Open in IMG/M
3300022223	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_8_1	Environmental	Open in IMG/M
3300022226	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_13	Environmental	Open in IMG/M
3300022413	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_21	Environmental	Open in IMG/M
3300024059 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_2	Environmental	Open in IMG/M
3300024060	Deep subsurface microbial communities from Kermadec Trench to uncover new lineages of life (NeLLi) - N074 metaG (SPAdes)	Environmental	Open in IMG/M
3300024338 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_9	Environmental	Open in IMG/M
3300024344	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)	Environmental	Open in IMG/M
3300024521 (restricted)	Seawater microbial communities from Amundsen Gulf, Northwest Territories, Canada - Cases_109_1	Environmental	Open in IMG/M
3300025883	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_11 (SPAdes)	Environmental	Open in IMG/M
3300025895	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_12 (SPAdes)	Environmental	Open in IMG/M
3300025970	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqC_D1 (SPAdes)	Environmental	Open in IMG/M
3300026352	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300027837 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_3	Environmental	Open in IMG/M
3300028043 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MG	Environmental	Open in IMG/M
3300028598	Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160420 (Illumina Assembly)	Environmental	Open in IMG/M
3300028599	Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160524 (Illumina Assembly)	Environmental	Open in IMG/M
3300028600	Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160317 (Illumina Assembly)	Environmental	Open in IMG/M
3300032274	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 1	Environmental	Open in IMG/M
3300032277	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotite	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
KVRMV2_1004982213	3300002231	Marine Sediment	MEIFGLSPVLSTIIIVTTGLILQNLLGWLKSKKDYDIKSAIASAIIAFVVGITIIGPQIEAIQDQMLSDLSQLTIVASLVASIAGFDTISKNVFKVANKKINPPKQT*
Ga0055582_10097592	3300003847	Pelagic Marine	VEIFGLSPVIATLTIVSSGVALQNILGWLKSKEGYNTRSALASTIIAFVVGITIIGPQIEAIQDQMLSDLSELTIVASLIASIAGFDVLTKNAFKIANQKINLQNKPV*
Ga0055582_10556792	3300003847	Pelagic Marine	VVSSGVVLQNLLGWLKSKEDYNARSALASAVIAFIVGITIIGPQIEAIQDQMLSDLSELTIVASLIASIAGFDILTKNAFKIANQKINLQNKPV*
Ga0055518_100011324	3300004074	Natural And Restored Wetlands	MEMFGLSPVFATILIVSMGVILQNFLGWLKSKEDYDIKNALASTIIAFIVGITIIGPQIEAIQDQMLSELSELTIFASLIASIAGFDVLTKNVFKIANSKIHLQNKPI*
Ga0055520_100256282	3300004150	Natural And Restored Wetlands	MFGLSPVFATILIVSMGVILQNFLGWLKSKEDYDIKNALASTIIAFIVGITIIGPQIEAIQDQMLSELSELTIFASLIASIAGFDVLTKNVFKIANSKIHLQNKPI*
Ga0055520_100365291	3300004150	Natural And Restored Wetlands	MEMFGLSPVVATLTIVSSGVILQNILGWLKSKEGYNVRSALASTIIAFVVGITIIGPQIEAIQNQMLSDLSELTIAASLIASIAGFDVLTKNAFRIANQKINLQNKPV*
Ga0082248_101162092	3300006420	Sediment	MDIFGLSPVIATIIIVSVGIVLQNLLSWLKSKENYDTRSALASAIIAFIVGITIIGPQIEAIQNQMLSELSELTIVTSLIASIAGFDILT
Ga0066376_108124791	3300006900	Marine	MEIFGLSPVLATIIIVTTGLMLQNLLGWLKSKESYDIKNALASTIIAFVVGITIIGPQIEVIQDQMLSELSQLTIFASLVASIAGFDTLTKNAFKMVNKKINPQNKPDNLV*
Ga0115371_100291193	3300008470	Sediment	MEIFGLSPVLATITIVSVGITLQNILGWLKSKEEYDIKNAVASAIIAFIVGITIIGPQIEAIQDQMLSELEELMIMASLIASIAGFDTLTKNAIKIANKKINVKNTKDQLNKS*
Ga0115371_105297682	3300008470	Sediment	MEIFGLSPVLATISIVFTGVLLQNILGWLKSKEKYDFKSGIASAIIAFIVGITIIGPQIEAIEDQMLSELSELMIFTSLIASIAGFDTLTKNAFKIANKKINN*
Ga0115371_109026422	3300008470	Sediment	MEIFGLSPVLATIVIVFTGLILQNLLGWLKSREDYDVRSAIASAIIAFVVGITIIGPQIEAIQDQMLSDLSQLTIGASLVASIAGFDTLTKNAFKVANKKISPQNKSNNPV*
Ga0114949_102663752	3300009139	Deep Subsurface	MEIFGLSPVLATIIIVATGLMLQNLLGWLKSKESYDIKNALASTIIAFVVGITIIGPQIEVIQDQMLSELSQLTIFASLVASIAGFDTLTKNAFKMVNKKINPQNKPNNLV*
Ga0114949_109351442	3300009139	Deep Subsurface	MEIFGLSPVLATIIIVTTGLMLQNLLGWLKSKESYDIRNALASTIIAFVVGITIIGPQIEVIQDQMLSELSQLTIFASLVASIAGFDTLTKNAFKMVNKKINPQNKPDNLV*
Ga0114932_100245445	3300009481	Deep Subsurface	MEVFGLSPVLATITIVVTGVALQNILGWLKSKEEYDAKSGIASAIIAFVVGITIIGPQIEAIQDQMLSDLAELMIFVSLVASIAGFDILTKNAFKVANKKIISKEN*
Ga0118731_1005707381	3300010392	Marine	MEIFGLSPVLATIIIVTTGLMLQNLLGWLKSKESYDIKNTLASTIIAFVVGITIIGPQIEVIQNQMLSELSQLTIFASLVASIAGFDTLTKNVLKVANKKINPQQTG*
Ga0118731_1024761564	3300010392	Marine	MDIFGLSPVVATILIVSIGIVLQNFLGWLKSKENYDIKSTLASTVIAFVVGITIIGPQIEAIQDQMLSDLSELTIVASLIASIAGFDVLTKNAFKIANQKINLQNKPV*
Ga0118731_1050697341	3300010392	Marine	MEIFGLSPVVATLSIVSSGVVLQNLLGWLKSKEDYNIRSALASAVIAFIVGITIIGPQIEAIQDQMLSDLSELIIVASLIASIAGFDILTKNAFKIANQKINLQNKPA*
Ga0118731_1076732081	3300010392	Marine	MEIFGLSPVVATLTIVSSGVVLQNILGWLKSKEDYNTRSALASAVIAFIVGITIIGPQIEAIQDQMLSDLSELTIVASLIASVAGFDILTKNAFKIANQKINSQNKSI*
Ga0118731_1088075731	3300010392	Marine	MEIFGLSPIVATITIVSLGVTLQNILGWLKSKEGYDTRSALASAIIAFVVGITIIGPQIEAIQDQMLSDLSELTIVASLIASVAGFDILAKNAFKIANNKIHLQNKPV*
Ga0118731_1091620972	3300010392	Marine	MEIFGLSPVVATLAIVSSGVVLQNLLGWLKSKEHYDARSALASAVIAFIVGITIIGPQIEAIQDQMLSDLSELTIVASLIASIAGFDILTKNAFKIANQKINLQNKPV*
Ga0118731_1095944501	3300010392	Marine	MEVFGLSPVLATIMIVFTGVTLQNLLGWLKSKEDYDIRNGIASAIIAFVVGITIIGPQIEAIQDQMLSELSELMIFTSLIASIAGFDTLTKNALKVANKKIHLQNKPI*
Ga0118731_1126845561	3300010392	Marine	MEIFGLSPVLATIIIVTTGLMLQNLLGWLKSKESYEIKNALASTIIAFVVGITIIGPQIEVIQNQMLSELSQLIIFASLVASIAGFDTLTKNAFKVANKKISSQNKP
Ga0118733_1010971521	3300010430	Marine Sediment	MEIFGLSPVLATIIIVSIGVILQNLLGWLKAQVDYDIRSAIASAIIAFVVGITIIGPQIEAIQDQMLSELSEFTIIASLIASIAGFD
Ga0118733_1018760092	3300010430	Marine Sediment	MEIFGLSPVVATIVIVLLCVILQNLLGWLKSKEDYDMRSALASAIIAFIVGITIIGPQIEAIQGQMLSELSEFTIIASLIASIAGFDVLTKNVFKIANQKINLQNKPI*
Ga0118733_1022799501	3300010430	Marine Sediment	MEVFGLSPVLATIMIVFTGVTLQNLLGWLKSKEDYDIRNGIASAIIAFVVGITIIGPQIEAIQDQMLSELSELMIFASLIASIAGFDTLTKNALKVANKKIHLQNKPI*
Ga0118733_1033672651	3300010430	Marine Sediment	MEIFGLSPVLATIIIVTTGLMLQNLLGWLKSKENYDIKNALASTIIAFVVGITIIGPQIEVIQDQMLSELSQLTIFASLVATIAGFDILTKNAFKVVNKKINPQNKPDNLV*
Ga0118733_1034950772	3300010430	Marine Sediment	MEIFGLSPVLATIIIVTTGLMLQNLLGWLKSKESYEIKNALASTIIAFVVGITIIGPQIEVFQNQMLSELSQLTIFASLVASIAGFDTLTKNAFKVANKKISSQTKPT*
Ga0118733_1051884931	3300010430	Marine Sediment	MDIFGLSPVVATILIVSTGVILQNFLGWLKSKENYDTRSALASAVIAFVVGITIIGPQIEAIQDQMLSDLSELTIVASLIASIAGFDVLAKNAFKIANQKINLQNKPV
Ga0139247_10119432	3300010967	Hydrothermal Chimney Microbial Mat	VATLTIVSSGVVLXNXLGWLKSKEDYNTRSALASAIIAFVVGITIIGPQIEAIQDQMLSDLSELIIVASLIASIAGFDVLTKNVFKIANQKINLQNKPV*
Ga0139247_10355902	3300010967	Hydrothermal Chimney Microbial Mat	MEIFGLSPVVATLTIVSSGVVLQNLLGWLKSKEDYNTRSALASAIIAFVVGITIIGPQIEAIQDQMLSDLSELTIVASLIASIAGFDVLTKNVFKIANQKINLQNKPV*
Ga0139247_10561991	3300010967	Hydrothermal Chimney Microbial Mat	MEIFGLSPVISTIVIVFTGLILQNILGWLKSKKDYDIKSAIASAIIAFVVGITMIGPQIEAIQDQMLSELSQLTIFASLVATIAGFDTISKNAFKVANNKINPQKQTG*
Ga0139250_10161202	3300010968	Hydrothermal Chimney Microbial Mat	MEIFGLSPVVATLTIVSSGVXXXNXLGWLKSKEDYNTRSALASAIIAFVVGITIIGPQIEAIQDQMLSDLSELTIVASLIASIAGFDVLTKNVFKIANQKINLQNKPV*
Ga0151663_10130995	3300011125	Marine	MEIFGLSPVLATISIVFSGVLLQNILGWLKSKEKYDFKSGIASAIIAFIVGITIIGPQIEAIEDQMLSELSELMIFTSLIASIAGFDTLTKNAFKIANKKINV*
Ga0151664_10308611	3300011256	Marine	MEIYGLSPVLATILIVFSGVLLQNILGWLKSKEKYDFKSGIASAIIAFIVGITIIGPQIEAIEDQMLSELSELMIFASLIASIAGFDTLTKNAFKIANKKIKI*
Ga0151662_10020201	3300011259	Marine	MEIFGLSPVLATISIVFSGVLLQNILGWLKSKEKYDFKSGIASEIIAFIVGITIIGPQIEAIEDQMLSELSELMIFASLIASIAGFDTLTKNAFKIANKKINI*
Ga0151661_10507731	3300011261	Marine	MEIFGLSPVFATILIVFSGVLLQNILGWLKSKEKYDFKSGIASAIIAFIVGITIIGPQIEAIEDQMLSELSELMIFASLIASIAGFDTLTKNAFKIANKKINI*
Ga0164320_100225762	3300013098	Marine Sediment	MEIFGLSPVFATILIVFSGVLLQNILGWLKSKEKYDFKSGIASAIIAFIVGITIIGPQIEAIEDQMLSELSELMIFTSLIASIAGFDTLTKNAFKIANKKINV*
Ga0224503_1000014225	3300022201	Sediment	MDVFGLSPVAATIIIVSVGVVLQNLLGWLKSKENYDTKSALASTIIAFVVGITIIGPQIEAIQNQMLSDLSELTIVASLIASIAGFDILTKNVFRIANQKMHLQNKPI
Ga0224503_100040314	3300022201	Sediment	MEIFGLSPVVATLSIVSSGVVLQNLLGWLKTKEDYNTRSALASAVIAFIVGITIIGPQIEAIQDQMLSDLSELIIAASLIASIAGFDILTKNVFKIANQKINLQNKPV
Ga0224503_100068075	3300022201	Sediment	MEIFGLSPVIATLTIVSSGIALQNILGWLKSKEGYNVRSALASTIIAFVVGITIIGPQIEAIQDQMLSDLSELTIVASLIASIAGFDVLTKNAFKIANQKINLQNKPV
Ga0224503_100069171	3300022201	Sediment	MEIFGLSPVVATLTIVSSGVVLQNILGWLKSKEDYNTRSALASAVIAFIVGITIIGPQIEAIQDQMLSDLSELTIVASLIASVAGFDILTKNAFKIANQKINSQNKSI
Ga0224503_103284531	3300022201	Sediment	IVIVLLGVMLQNLLGXLKSKENFDIRSALASAIIAFVVGITIIGPQIEPIQGQMLSELSEFTIVANLIASIAGFDVLTKNVFKIAN
Ga0224498_101325721	3300022202	Sediment	MEVFGLSPVFATVLIVSIGVVLQNILGWLKTEEDYDIKSALASAIIAFVVGITIIGPQIEAIQDQMLSELSELTIIASLIASIAGFDILTKNAFKIANKKIHLQNKPV
Ga0224511_100802191	3300022205	Sediment	MEIFGLSPVVATIVIVSLGVILQNLLGWLKSKEVYDIRSASASTIIAFVVGITIIGPQIEVIQDQMLSDLSELTIVASLIASVAGFDVLAKNVFKIANNNLYLQNKSI
Ga0224497_1000003222	3300022209	Sediment	MQVFGLSPVIATIAIVSLGVILQNLLVWLKSKENYDIRSASASAIIAFVVGITIIGPQIEVIQDQMLSDLSELTIVASLIASIAGFDILAKNVFKIANNKIHLQNKPI
Ga0224497_1000179518	3300022209	Sediment	MEIFGLSPVVATIAIVSLGVILQNLLGWLKSKEGYDIRSVSASAIIAFVVGITIIGPQIEVIQDQMLSDLSELTIVASLIVSVAGFDILAKNAFRIANNKIYLQNKSI
Ga0224497_100018038	3300022209	Sediment	MEIFGLSPVVATIVIVSLGVILQNLLGWLKSKEGHDIRSASPSTIIAFVGIAIIGPQIEVIQDQMLSDLSELTIVASLIVTVAGFDVLVKNAFKIANNKLYLQNKSI
Ga0224497_100035252	3300022209	Sediment	MEIFGLSPVVATLTIVSSGVALQNLLGWLKSKEDYNIRSALASAIIAFIVGITIIGPQIEAIQNQMLSDLSQLIIVASLIASIAGFDVLTKNVFKIANQKINSQNKSV
Ga0224497_101139861	3300022209	Sediment	VFTGVALQNILGWLKTKGEYDIRSAAASAIIAFVVGITIIGPQIEIIQDQMMSDLSELIIVASLVASIAGFDTLTKNAFKIASNKIHMENKTI
Ga0224502_102026651	3300022218	Sediment	MEIFGLSPVVATIAIVSLGVILQNLLGWLKSKEGYDIRSASASAIIAFVVGITIIGPQIEVIQDQMLSDLSELTIVASLIASVAGFDILAKNAFRIANNKIYLQNKSI
Ga0224502_103823141	3300022218	Sediment	MEIFGLSPVVATIVIVSLGVMLQNLLGWLKSKEVYDIRSASASTIIAFVVGITIIGPQIEVIQDQMLSDLSELTIVASLIASVAGFDVLAKNVFKIANNNLYLQNKSI
Ga0224513_101247393	3300022220	Sediment	MEIFGLSPVVAIIVIVLLGVMLQNLLGXLKSKENFDIRSALASAIIAFVVGITIIGPQIEPIQGQMLSELSEFTIVANLIASIAGFDVLTKNVFKIA
Ga0224506_100110343	3300022221	Sediment	MEIFGLSPVVATIVIVSLGVMLQNLLGWLKSKEVYDIRSAFASTIIAFVVGITIIGPQIEVIQDQMLSDLSELTIIASLIASVAGFDVLAKNVFKIASNKIYLQNKSI
Ga0224506_101547241	3300022221	Sediment	LSPVVATIVIVSLGVMLQNLLGWLKSKEVYDIRSASASTIIAFVVGITIIGPQIEGIQDQMLSDLSELTIVASLIASVAGFDVLAKNVFKIVNNKLYLQNKSI
Ga0224506_101655902	3300022221	Sediment	MEIFGLSPVVATIVIVSLGVILQNLLGWLKSKEVYDIRSASASTIIAFVVGITIIGPQIEVIQDQMLSDLSELTIVASLIASVAGFDVLAKNVFKIANNKLYLQNKSI
Ga0224501_100085266	3300022223	Sediment	MEIFGLSPVVATIVIVSLGVMLQNLLGWLKSKEVYDIRSASASTIIAFVVGITIIGPQIEGIQDQMLSDLSELTIVASLIASVAGFDVLAKNVFKIVNNKLYLQNKSI
Ga0224512_103396402	3300022226	Sediment	YFRYLCQKSLVEVFGLSPVLATISVVFTGVALQNILGWLKTKGEYDIRSAAASAIIAFVVGITIIGPQIEIIQDQMMSDLSELIIVASLVASIAGFDTLTKNAFKIASNKIHMENKTI
Ga0224512_105111191	3300022226	Sediment	MEVFGLSPVLATIIIVFTGVTLQNLLGWLKSKEGYDVRNGIASAIIAFVVGITIIGPQIEAIQDQMLSELSELIIFASLIASIAGFDTLTKNALKAANKKIHLQSKSI
Ga0224508_100102535	3300022413	Sediment	MEVFGLSPVLATIMIVFTGVTLQNLLGWLKSKEDYDIRNGIASAIIAFVVGITIIGPQIEAIQDQMLSELSELMIFASLIASIAGFDTLTKNALKVANKKIHLQNKPI
Ga0224508_100648053	3300022413	Sediment	MEIFGLSPVVATLTIVSSGVVLQNILGWLKSKEDYNTRSALASTVIAFVVGITIIGPQIEAIQDQMLSDLSELTIMASLIASIAGFDVLTKNAFKIANQKINLQNKPV
Ga0224508_101112823	3300022413	Sediment	MDIFGLSPVAATIIIVSVGVVLENLLGWLKSKENYDAKSALASTIIAFVVGITIIGPQIEAIQDQMLSELSELTIIASLIASIAGFDILTKNVFRIANKKIHLPNKPV
Ga0224508_101582291	3300022413	Sediment	VEVFGLSPVLATISIVFTGVALQNILGWLKTKGEYDIRSAAASAIIAFVVGITIIGPQIEIIQDQMMSDLSELIIVAGLVASIAGFDTLTKNVFKIASNKIHMEDKTI
Ga0224508_101677182	3300022413	Sediment	MDIFGLSPVVTTILIVSTGIILQNFLGWLKSKENYDTRSALASTVIAFVVGITIIGPQIEAIQDQMLSDLSELTIVTSLIASIAGFDVLTKNAFKIANQKINLQNKPV
Ga0224508_105021001	3300022413	Sediment	VEVFGLSPVLATISVVFTGVALQNILGWLKTKGKYDIRSAVASAIIAFVVGITIIGPQIEIIQDQMMSDLSELIIVASLVASIAGFDTLTKNAFKIASNKIHMEDKTI
Ga0224508_107234371	3300022413	Sediment	MEIFGLSPIVATILIVSIGVTLQNILGWLKTNEKYHVKSAMASTIIAFVVGITIIGPQIESIQNQMLSELSELTIIASLVASIAGFDVLTKNIFKIANNKVHLQNKPI
(restricted) Ga0255040_103120492	3300024059	Seawater	MEIFGLSPVLATISIVFTGVLLQNILGWLKSKEKYDFKSGIASAIIAFIVGITIIGPQIEAIENQMLSELSELMIFASLIASIAGFDTLTKNAFKIANKKINN
Ga0209987_104204491	3300024060	Deep Subsurface	MEIFGLSPVLATIIIVTTGLMLQNLLGWLKSKESYDIRNALASTIIAFVVGITIIGPQIEVIQDQMLSELSQLTIFASLVASIAGFDTLTKNAFKMVNKKINPQNKPDNLV
(restricted) Ga0255043_102882021	3300024338	Seawater	MEIFGLSPVLATIIIVTVGLMLQNLLGWLKSKESYDIKNTLASTIIAFVVGITIIGPQIEVIQNQMLSELSQLTIFASLVASIAGFDTLTKNVLKVANKKINPQNKQDNPV
Ga0209992_100487232	3300024344	Deep Subsurface	MEVFGLSPVLATITIVVTGVALQNILGWLKSKEEYDAKSGIASAIIAFVVGITIIGPQIEAIQDQMLSDLAELMIFVSLVASIAGFDILTKNAFKVANKKIISKEN
(restricted) Ga0255056_102183512	3300024521	Seawater	TTGLVLQNLLGWLKSKESYDIKNALASTIIAFVVGITIIGPQIEVIQDQMLSELSQLTIFASLVASIAGFDTLTKNAFKMVNKKINPQNKPDNLV
Ga0209456_100256442	3300025883	Pelagic Marine	VEIFGLSPVIATLTIVSSGVALQNILGWLKSKEGYNTRSALASTIIAFVVGITIIGPQIEAIQDQMLSDLSELTIVASLIASIAGFDVLTKNAFKIANQKINLQNKPV
Ga0209456_100351343	3300025883	Pelagic Marine	MEIFGLSPVVATLTIVSSGVVLQNILGWLKSKEDYNTRSALASAIIAFIVGITIIGPQIEAIQDQMLSDLSELTIVASLIASVAGFDILTKNAFKIANQKINSQNKSI
Ga0209456_100586153	3300025883	Pelagic Marine	MEIFGLSPVVATLAVVSSGVVLQNLLGWLKSKEDYNARSALASAVIAFIVGITIIGPQIEAIQDQMLSDLSELTIVASLIASIAGFDILTKNAFKIANQKINLQNKPV
Ga0209456_101089782	3300025883	Pelagic Marine	MEIFGLSPVVATLAIVSSGVVLQNLLGWLKSKEDYDTRSALASALIAFIVGITIIGPQIEAIQDQILSDLSELTIVTSLITSIAGFDILTKNAFKIANQKINLQNKPV
Ga0209456_101440332	3300025883	Pelagic Marine	SSMEIFGLSPIVATIAIVSLGVTLQNILGWLKSKKDYDTRSALASAIIAFVVGITIIGPQIEAIQDQMLSDLSELTIVASLIASIAGFDILAKNAFKIANNKIHLQNKPV
Ga0209567_100339782	3300025895	Pelagic Marine	MEISGLSPVVATLAVVSSGVVLQNLLGWLKSTEDYNARSALASAVIAFIVGITIIGPQIEAIQDQMLSDLSELTIVASLIASIAGFDILTKNAFKIANQKINLQNKPV
Ga0209567_100386424	3300025895	Pelagic Marine	MEIFGLSPVIATLTIVSSGVALQNILGWLKSKEGYNTRSALASTIIAFVVGITIIGPQIEAIQDQMLSDLSELTIVASLIASIAGFDVLTKNAFKIANQKINLQNKPV
Ga0209567_101035672	3300025895	Pelagic Marine	MEIFGLSPVVATLAIVSSGVVLQNLLGWLKSKEDYDTRSALASALIAFIVGITIIGPQIEAIQDQILSDLSELTIVTSLIASIAGFDILTKNAFKIANQKINLQNKPV
Ga0210081_10008013	3300025970	Natural And Restored Wetlands	MEMFGLSPVFATILIVSMGVILQNFLGWLKSKEDYDIKNALASTIIAFIVGITIIGPQIEAIQDQMLSELSELTIFASLIASIAGFDVLTKNVFKIANSKIHLQNKPI
Ga0210130_10031382	3300026024	Natural And Restored Wetlands	MEMFGLSPVVATLTIVSSGVILQNILGWLKSKEGYNVRSALASTIIAFVVGITIIGPQIEAIQNQMLSDLSELTIAASLIASIAGFDVLTKNAFRIANQKINLQNKPV
Ga0210107_10741311	3300026352	Natural And Restored Wetlands	VILQNFLGWLKSKEDYDIKNALASTIIAFIVGITIIGPQIEAIQDQMLSELSELTIFASLIASIAGFDVLTKNVFKIANSKIHLQNKPI
(restricted) Ga0255041_101459521	3300027837	Seawater	MEIFGLSPVLATISIVFSGVLLQNILGWLKSKEKYDFKSGIASAIIAFIVGITIIGPQIEAIENQMLSELSELMIFTSLIASIAGFDTLTKNAFKIANKKINI
(restricted) Ga0255041_101616321	3300027837	Seawater	MEIFGLSPVLATIIIVTTGLMLQNLLGWLKSKEDYDLKSALASTIIAFVVGITIIGPQIEVIQDQMLTELSQLTIFASLVASIAGFDTLTKNAFKVANKKINVQNK
(restricted) Ga0233417_101874942	3300028043	Sediment	MEVLGLPPVLATLAIVSTGVALQNILGWLKNKEYYDIRNTVASAIIAFIVGITIIGPQIEVIYDQMLSDLSELTIITSLTASIAGFDTLTKNAIKIVGRKISFENSKPI
Ga0265306_101830281	3300028598	Sediment	MEIFGLSPVVATLTIVSSGVALQNILGWLKSKEGYNTRSALASTIIAFVVGITIIGPQIEAIQDQMLSDLSELTIVASLIASIAGFDVLTKNAFKIANQKINLQNKPV
Ga0265306_104801061	3300028598	Sediment	MEIFGLSPVVATLTIVSSGVVLQNLLGWLKSKEGYNARSALASTIIAFVVGITIIGPQIEAIQDQMLSDLSELTIAASLIASIAGFDVLTKNAFKIANQKINLQNKPV
Ga0265309_100293442	3300028599	Sediment	MDIFGLSPVVATILIVSTGIVLQNFLGWLKSKKNYDTRSALASTVIAFVVGITIIGPQIEAIQDQMLSDLSELTIVASLIASIAGFDVLAKNAFKIANQKINLQNKPV
Ga0265309_100826323	3300028599	Sediment	MEIFGLSPVLATISIVLTGVLLQNILGWLKSKEEIDFKSGIASAIIAFIVGITIIGPQIEAIEDQMLSELSELMIFASLIASIAGFDTLTKNA
Ga0265309_101571393	3300028599	Sediment	MEIFGLSPVLATISIVFTGVLLQNILGWLKSKEKYDFKSGIASAIIAFIVGITIIGPQIEAIEDQMLSELSELMIFASLIASIAGFDTLTKNAFKIANKKINN
Ga0265309_102383082	3300028599	Sediment	MGIFGLSPVLATISIVFTGVLLQNILGWLKSKEKYDFKSGIASAIIAFIVGITIIGPQIEAIEDQMLSELSELMIFASLIASIAGFDTLTKNAFKIANKKINN
Ga0265309_106337862	3300028599	Sediment	MEIFGLSPIVATIAIVSLGVTLQNILGWLKSKEGYDTRSALASAIIAFVVGITIIGPQIEAIQDQMLSDLSELTIVASLIASIAGFDILAKNAFKIANNKIHLQNKPV
Ga0265303_101103003	3300028600	Sediment	MEIFGLSPIVATIAIVSLGVTLQNILGWIKSKEGYDTRSALASAIIAFVVGITIIGPQIEAIQDQMLSDLSELTIVASLIASIAGFDILAKNAFKIANNKIHLQNKPV
Ga0265303_103761913	3300028600	Sediment	MEIFGLSPVLATISIVLTGVLLQNILGWLKSKEEIDFKSGIASAIIAFIVGITIIGPQIEAIEDQMLSELSELMIFASLIASIAGFDTLTKNAFKIANKKINA
Ga0265303_106259001	3300028600	Sediment	IFGLPPVTVTIAIVSVGVVLQNFLGWLKSKEDYDARSALASTVIAFIVGITIIGPQIEVIQNQMLSDLSELTIVASLIASIAGFDILTKNVFKIANQKINLQNKTV
Ga0265303_107382502	3300028600	Sediment	MDIFGLSPVVATILIVSTGIVLQNFLGWLKSKKNYDTRSALASTVIAFVVGITIIGPQIEAIQDQMLSDLSELTIVASLIASIAGFDVLAKNAFKIANQKINLQNKPVXFIDWILRPATISC
Ga0265303_112431332	3300028600	Sediment	MDIFGLSPVVATLAIVSVGIALQNLLGWLKSKEDYDIRSALASTVIAFVVGITIIGPQIEAIQGQMLSDLSELTIVASLIASIAGFDVLTKNVFKIANQKINLQNKPI
Ga0265303_112766851	3300028600	Sediment	MEIFGLSPVLATISIVFTGVLLQNILGWLKSKEKYDFKSGIASAIIAFIVGITIIGPQIEAIEDQMLSELSELMIFASLIASIAGFDTLTKNAFKIA
Ga0265303_118770121	3300028600	Sediment	LSPVVATIVIVSLGVMLQNLLGWLKSKESFDIRSALASTIIAFVVGITIIGPQIEVIQGQMLSELSELTIVASLIASIAGFDILTKNVFKIANQKINLQNKPI
Ga0316203_12032431	3300032274	Microbial Mat	MEIFGLSPVLATITIVAVGITLQNILGWLKSKEEYDIRSAIASAIIAFIVGITIIGPQIEAIQDQMLSELEELMIMASLIASIAGFDTLTKNAIKIANKKINVKNTK
Ga0316202_101237154	3300032277	Microbial Mat	MEIFGLSPVLATISIVFTGVLLQNILGWLKSKEKYDFRSGIASAIIAFIVGITIIGPQIEAIENQMLSELSELMIFASLIASIAGFDTLTKNAFKIANKKINN
Ga0316202_101397152	3300032277	Microbial Mat	MEIFGLSPVLATITIVAVGITLQNILGWLKSKEEYDIRSAIASAIIAFIVGITIIGPQIEAIQDQMLSELEELMIMASLIASIAGFDTLTKNAIKIANKKINVKNTKEQSNKS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters