Metagenome / Metatranscriptome Family F103337

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103337
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	103 residues
Representative Sequence	MSNQVIVHKGRTNTLLVDLGIDVSSDTITSEIRSEPNVDAPLLATWVVAFTTDGTDGELTFTLDDTFTSQITAQSGYMDIKRVTGGEPVPVFDKPLEVVFRGTVTQ
Number of Associated Samples	82
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.75 %
% of genes near scaffold ends (potentially truncated)	27.72 %
% of genes from short scaffolds (< 2000 bps)	69.31 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.416 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment (10.891 % of family members)
Environment Ontology (ENVO)	Unclassified (24.752 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (26.733 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.99% β-sheet: 38.06% Coil/Unstructured: 58.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.1.18.9: E set domains	d1g0da1	1g0d	0.67
b.1.18.9: E set domains	d1rlla1	1rll	0.66
b.2.5.2: p53-like transcription factors	d1t4wa_	1t4w	0.66
b.1.18.9: E set domains	d1f13a1	1f13	0.65
b.1.18.9: E set domains	d2q3za1	2q3z	0.65

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF01510	Amidase_2	7.92
PF01391	Collagen	4.95
PF13884	Peptidase_S74	4.95
PF13563	2_5_RNA_ligase2	2.97
PF13539	Peptidase_M15_4	1.98
PF05065	Phage_capsid	1.98
PF01471	PG_binding_1	1.98
PF04860	Phage_portal	1.98
PF07484	Collar	0.99
PF10926	DUF2800	0.99
PF04586	Peptidase_S78	0.99
PF02839	CBM_5_12	0.99
PF12904	Collagen_bind_2	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	1.98
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.34 %
Unclassified	root	N/A	33.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.42 %
Unclassified	root	N/A	33.66 %
Viruses	superkingdom	All Organisms → Viruses	7.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.42 %
Unclassified	root	N/A	33.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.95 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.97 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	48.51 %
Unclassified	root	N/A	33.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.95 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.97 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.97 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	48.51 %
Unclassified	root	N/A	33.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.95 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.97 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.97 %

Name	Rank	Taxonomy	Distribution
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	48.51 %
Unclassified	root	N/A	33.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.95 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	2.97 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.97 %

Name	Rank	Taxonomy	Distribution
unclassified Patescibacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group	48.51 %
Unclassified	root	N/A	33.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.95 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	2.97 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2.97 %

Name	Rank	Taxonomy	Distribution
Patescibacteria group bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	48.51 %
Unclassified	root	N/A	33.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.95 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.97 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	1.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886013\|SwBSRL2_contig_10640069	Not Available	1964	Open in IMG/M
3300002835\|B570J40625_100350436	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1463	Open in IMG/M
3300003404\|JGI25920J50251_10131129	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	554	Open in IMG/M
3300003493\|JGI25923J51411_1074409	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	584	Open in IMG/M
3300004097\|Ga0055584_102315221	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	545	Open in IMG/M
3300004126\|Ga0066179_10024785	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1263	Open in IMG/M
3300004156\|Ga0062589_100718117	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	890	Open in IMG/M
3300004156\|Ga0062589_100995248	Not Available	782	Open in IMG/M
3300004157\|Ga0062590_101556400	Not Available	666	Open in IMG/M
3300004157\|Ga0062590_102094210	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	589	Open in IMG/M
3300004157\|Ga0062590_102112533	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	587	Open in IMG/M
3300004157\|Ga0062590_102665809	Not Available	532	Open in IMG/M
3300004463\|Ga0063356_100056233	All Organisms → cellular organisms → Bacteria	4001	Open in IMG/M
3300004836\|Ga0007759_11566734	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1947	Open in IMG/M
3300005290\|Ga0065712_10100626	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	2057	Open in IMG/M
3300005294\|Ga0065705_10113115	All Organisms → cellular organisms → Bacteria	3851	Open in IMG/M
3300005338\|Ga0068868_100109916	Not Available	2239	Open in IMG/M
3300005354\|Ga0070675_101958946	Not Available	540	Open in IMG/M
3300005459\|Ga0068867_100094957	Not Available	2268	Open in IMG/M
3300005526\|Ga0073909_10001966	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	6168	Open in IMG/M
3300005547\|Ga0070693_100426347	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	925	Open in IMG/M
3300005826\|Ga0074477_1544479	All Organisms → Viruses → Predicted Viral	1245	Open in IMG/M
3300005937\|Ga0081455_10160871	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1721	Open in IMG/M
3300006358\|Ga0068871_101183781	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	716	Open in IMG/M
3300007004\|Ga0079218_12285225	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	632	Open in IMG/M
3300007984\|Ga0102931_1402887	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	500	Open in IMG/M
3300009081\|Ga0105098_10186453	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	951	Open in IMG/M
3300009081\|Ga0105098_10214676	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	894	Open in IMG/M
3300009098\|Ga0105245_10048116	Not Available	3814	Open in IMG/M
3300009146\|Ga0105091_10000033	Not Available	43660	Open in IMG/M
3300009146\|Ga0105091_10121101	Not Available	1212	Open in IMG/M
3300009146\|Ga0105091_10202288	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300009157\|Ga0105092_10251539	Not Available	993	Open in IMG/M
3300009159\|Ga0114978_10031819	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	3761	Open in IMG/M
3300009168\|Ga0105104_10076916	Not Available	1799	Open in IMG/M
3300009469\|Ga0127401_1065513	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1000	Open in IMG/M
3300009609\|Ga0105347_1000367	All Organisms → cellular organisms → Bacteria	21838	Open in IMG/M
3300009609\|Ga0105347_1014452	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	2702	Open in IMG/M
3300009610\|Ga0105340_1000957	Not Available	13354	Open in IMG/M
3300009610\|Ga0105340_1003284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	6827	Open in IMG/M
3300009610\|Ga0105340_1104737	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1139	Open in IMG/M
3300010362\|Ga0126377_12790265	Not Available	563	Open in IMG/M
3300011439\|Ga0137432_1047135	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1293	Open in IMG/M
3300012159\|Ga0137344_1002713	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	2333	Open in IMG/M
3300012212\|Ga0150985_105908761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	4635	Open in IMG/M
3300012212\|Ga0150985_113837175	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	763	Open in IMG/M
3300012496\|Ga0157353_1041078	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	531	Open in IMG/M
3300012679\|Ga0136616_10171352	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1010	Open in IMG/M
3300012895\|Ga0157309_10020654	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1437	Open in IMG/M
3300012900\|Ga0157292_10019667	All Organisms → Viruses → Predicted Viral	1604	Open in IMG/M
3300013306\|Ga0163162_12309642	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	618	Open in IMG/M
3300015372\|Ga0132256_102897221	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	577	Open in IMG/M
3300017792\|Ga0163161_11705719	Not Available	558	Open in IMG/M
3300017962\|Ga0181581_10710705	Not Available	604	Open in IMG/M
3300018032\|Ga0187788_10089409	All Organisms → Viruses → Predicted Viral	1100	Open in IMG/M
3300018032\|Ga0187788_10530464	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	513	Open in IMG/M
3300018424\|Ga0181591_10786125	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	662	Open in IMG/M
3300018476\|Ga0190274_12729480	Not Available	591	Open in IMG/M
3300018481\|Ga0190271_10021499	All Organisms → cellular organisms → Bacteria	4989	Open in IMG/M
3300018481\|Ga0190271_11267685	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	858	Open in IMG/M
3300018481\|Ga0190271_11443068	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	806	Open in IMG/M
3300020161\|Ga0211726_10857635	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	770	Open in IMG/M
3300020560\|Ga0208852_1034713	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	894	Open in IMG/M
3300021298\|Ga0210349_1076038	Not Available	553	Open in IMG/M
3300021961\|Ga0222714_10154217	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1375	Open in IMG/M
3300021961\|Ga0222714_10593724	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	554	Open in IMG/M
3300021962\|Ga0222713_10037110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3848	Open in IMG/M
3300021976\|Ga0193742_1000143	Not Available	51611	Open in IMG/M
3300022908\|Ga0247779_1156893	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	596	Open in IMG/M
3300023169\|Ga0247762_1149782	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	652	Open in IMG/M
(restricted) 3300024062\|Ga0255039_10149312	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300024287\|Ga0247690_1000541	Not Available	7966	Open in IMG/M
3300024287\|Ga0247690_1001164	Not Available	4182	Open in IMG/M
3300025926\|Ga0207659_11771473	Not Available	525	Open in IMG/M
3300025927\|Ga0207687_10743282	Not Available	834	Open in IMG/M
3300025930\|Ga0207701_11347926	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	583	Open in IMG/M
3300025942\|Ga0207689_11051322	Not Available	687	Open in IMG/M
3300026089\|Ga0207648_10692579	Not Available	944	Open in IMG/M
3300026643\|Ga0207923_100322	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	573	Open in IMG/M
3300026675\|Ga0208068_100083	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1551	Open in IMG/M
3300027513\|Ga0208685_1000294	Not Available	18164	Open in IMG/M
3300027533\|Ga0208185_1013015	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	2079	Open in IMG/M
3300027533\|Ga0208185_1031041	All Organisms → Viruses → Predicted Viral	1310	Open in IMG/M
3300027644\|Ga0209356_1015574	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	2624	Open in IMG/M
3300027675\|Ga0209077_1000016	Not Available	43659	Open in IMG/M
3300027675\|Ga0209077_1128192	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	707	Open in IMG/M
3300027707\|Ga0209443_1000543	Not Available	25725	Open in IMG/M
3300027722\|Ga0209819_10289654	Not Available	564	Open in IMG/M
3300027732\|Ga0209442_1052681	All Organisms → Viruses → Predicted Viral	1750	Open in IMG/M
3300027743\|Ga0209593_10000384	Not Available	21857	Open in IMG/M
3300027782\|Ga0209500_10046064	All Organisms → cellular organisms → Bacteria	2357	Open in IMG/M
3300027785\|Ga0209246_10358631	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	553	Open in IMG/M
3300027821\|Ga0209811_10002429	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	6170	Open in IMG/M
3300027876\|Ga0209974_10060040	Not Available	1286	Open in IMG/M
3300028009\|Ga0265348_100269	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	1164	Open in IMG/M
3300029293\|Ga0135211_1016469	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	776	Open in IMG/M
3300031539\|Ga0307380_10528737	Not Available	1031	Open in IMG/M
3300034012\|Ga0334986_0557865	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	552	Open in IMG/M
3300034060\|Ga0334983_0066640	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2339	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.18%
Host-Associated	Host-Associated	17.82%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	49.50%
Terrestrial	Environmental → Terrestrial	32.67%
Plants	Host-Associated → Plants	17.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	29.70%
Freshwater	Environmental → Aquatic → Freshwater	28.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.88%
Sediment	Environmental → Aquatic → Sediment	10.89%
Marine	Environmental → Aquatic → Marine	8.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.95%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.97%
Unclassified	Environmental → Aquatic → Unclassified	0.99%
Roots	Host-Associated → Plants → Roots	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.77%
Lentic	Environmental → Aquatic → Freshwater → Lentic	11.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment	10.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.91%
Lake	Environmental → Aquatic → Freshwater → Lake	4.95%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.97%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.97%
Loam	Environmental → Terrestrial → Soil → Loam	2.97%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.98%
Ice	Environmental → Aquatic → Freshwater → Ice	0.99%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.99%
Strait	Environmental → Aquatic → Marine → Strait	0.99%
Harbor	Environmental → Aquatic → Marine → Harbor	0.99%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.99%
Clay	Environmental → Terrestrial → Soil → Clay	0.99%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.87%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	10.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.89%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	9.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.93%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	4.95%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.97%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.97%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	1.98%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.99%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.99%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Marine → Harbor → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.99%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.99%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.99%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.99%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	10.89%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	9.90%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	9.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.96%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.97%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.97%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	1.98%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.98%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.98%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.98%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.98%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.98%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.99%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.99%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.99%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.99%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.99%
Marine Harbor	Environmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor	0.99%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.99%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.99%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Pond Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Pond Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental	Open in IMG/M
3300003493	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300004126	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004836	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005826	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.186_BBA	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007984	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R1_C_D1_MG	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009469	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 6m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012496	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.090610	Environmental	Open in IMG/M
3300012679	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ299 (21.06)	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020560	Freshwater microbial communities from Lake Mendota, WI - 18JUN2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300021298	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.460 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021976	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c1	Environmental	Open in IMG/M
3300022908	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L221-509R-5	Environmental	Open in IMG/M
3300023169	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L081-202R-4	Environmental	Open in IMG/M
3300024062 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_1	Environmental	Open in IMG/M
3300024287	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK31	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026643	Grasslands soil microbial communities from Chapel Hill, North Carolina, USA that are Nitrogen fertilized -NN338 (SPAdes)	Environmental	Open in IMG/M
3300026675	Grasslands soil microbial communities from Chapel Hill, North Carolina, USA that are Nitrogen fertilized -NN344 (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027644	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027679	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027707	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028009	Plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE6	Environmental	Open in IMG/M
3300029293	Marine harbor viral communities from the Indian Ocean - SCH2	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034060	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16May2013-rr0016	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
SwBSRL2_0697.00002570	2162886013	Switchgrass Rhizosphere	MAGERVIVHKGRTNTITVGLGIDVSADTITSEVRSEPARDAPLIMTWTVTFADDGTDGELILTVDNLITSEIKATSGFMDLKRVTGSEPIPVFDQPIEVEFRGTVTA
B570J40625_1003504363	3300002835	Freshwater	MSNQVIVHKSRTNTLLVDLGVDVSDDTITSEIRSEPNSDSPLLATWVVNFVTDGSDGELVFTLDDTFTAQITATSGYMDVKRVTGGEPVPVFDKPLEVVFRGTVTE*
JGI25920J50251_101311292	3300003404	Freshwater Lake	ITSQIRSEPRSDSTLIATWVVAKVDGGVNGELTLTLDDSATSNITVLTGYMDIKRIVSGEPIPVFDKPLEVVFRGTVTL*
JGI25923J51411_10744091	3300003493	Freshwater Lake	QVVVHKGRTNKVLVDLGVNVSADTITSQIRSEPRSDSTLIATWVVAKVDGGVNGELTLTLDDSATSNITVLTGYMDIKRIVSGEPIPVFDKPLEVVFRGTVTL*
Ga0055584_1023152212	3300004097	Pelagic Marine	MSNQVIVHKGRTNILTVNMGMDVSLDTLTSEIRSSADSASPLIATWAVTFATDGTDGELVLTLDDAITSAIADDRGYMDIKRVTGGEPVPVFDKPLEVIFRGSVTA*
Ga0066179_100247851	3300004126	Freshwater Lake	LMSNQVVVHKGRTNKVLVDLGVNVSADTITSQIRSEPRSDSTLIATWVVAKVDGGVNGELTLTLDDSATSNITVLTGYMDIKRIVSGEPIPVFDKPLEVVFRGTVTL*
Ga0066179_102174381	3300004126	Freshwater Lake	VSDDTITSEIRSEPNSDSPLLATWVVNFVTDGSDGELVFTLDDTFTAQITATSGYMDVKRVTGGEPVPVFDKPLEVVFRGTVTE*
Ga0062589_1007181172	3300004156	Soil	MAQVIVHKNRTNTIQINMGTDVSASTFTSEIRSDPDFTSPLIATWEVSFLTDGRDGKLILRLDDSITKEIRPTSGFMDLKRISGAEPIPVFDRPLEVSFRGTVTA*
Ga0062589_1009952482	3300004156	Soil	MSNEVIVHKGRTNIVIVDMGMDISTETYTSQIRSTPNQDATLIAEWVVTFETDGTDGKLKLVLDDLVTSQIKATSGFMDLKRMISTEPFAAFDKPLEVTFRGTVTV*
Ga0062590_1015564001	3300004157	Soil	MSNEVIVHKGRTNIVIVDMGMDISTETYTSQIRSTPNQDATLIAEWVVTFETDGTDGKLKLVLDDLATSQIKATSGFMDLKRMISTEPFAAFDKPLEVTFRGTVTV*
Ga0062590_1020942102	3300004157	Soil	MSNSVVIHKGRTNIITVSLGINVSADTITSEIRSEPDVNAPLIATWIVSFATNGADGELIFRLDDSATAGIKANSGFMDIKRVSAGEPIPVFDRPLEVTIQGSVTA*
Ga0062590_1021125332	3300004157	Soil	MSNEVVVHKGRTNVVTVDMGIDVSADTLTSEIRSEPNQGAPLIATWDVAFATDGTDGKLILTLDDLATSQIKATSGFMDIKRVTGSEAVAVFDKPLEVTFRGTVTV*
Ga0062590_1026658092	3300004157	Soil	MSNEVIVHKGRTNIVIVDMGMDISTETYTSQIRSTPNQDSTLIAEWVVTFETDGTDGKLKLVLDDLVTSQIKATSGFMDLKRMISTEPFAAFDKPLEVTFRGTVTV*
Ga0063356_1000562334	3300004463	Arabidopsis Thaliana Rhizosphere	MAGERVIVHKGRTNTITVGLGIDVSADTITSEVRSEPSQDAPLIMTWTVSFADDGTDGELILTVDNLITSEIKATSGFMDLKRVSGSEPLSVFDQPIEVEFRGTVTA*
Ga0007759_115667341	3300004836	Freshwater Lake	MSNQVVVHKGRTNKVLVDLGVNVSADTITSQIRSEPRSDSTLIATWVVAKVDGGVNGELTLTLDDSATSNITVLTGYMDIKRIVSGEPIPVFDKPLEVVFRGTVTL*
Ga0065712_101006261	3300005290	Miscanthus Rhizosphere	KGRTNTLRIAMGQDVSADVITSEIRSQADVEAPLLATWDVDFETDGHDGMLILTLDDLVTSQIAATIGYMDLKRVVGGEPIPVFDRPLEVSFRGTVTE*
Ga0065705_101131157	3300005294	Switchgrass Rhizosphere	MAGERVIVHKGRTNTITVGLGIDVSADTITSEVRSEPARDAPLIMTWTVTFADDGTDGELILTVDNLITSEIKATSGFMDLKRVTGSEPIPVFDQPIEVEFRGTVTA*
Ga0068868_1001099162	3300005338	Miscanthus Rhizosphere	MTSKIVVHKGRTNTLTVDMGIDVSADTITSEIRSEANYDSPLLATWIVTHTPGKPNELILTLDDLATRQIKANSGYMDIKRVTGSEPVPVFDRPLEVTFRGTVTA*
Ga0070675_1019589462	3300005354	Miscanthus Rhizosphere	MTSKIVVHKGRTNTLTVDMGIDVSADTITSEIRSEANYDSPLLATWIVTHTPGKPNELILTLDDLATRQIKANSGYMDIKRVTGSEPVPVFD
Ga0068867_1000949572	3300005459	Miscanthus Rhizosphere	MTSKIVVHKGRTNTLTVDMGIDVSADTITSEIRSEANYDSPLLATWIVTHTPGKPNELILTLDDLATRQIKANSGYMDIKRVTGSEPVPVYDRPLEVTFRGTVTA*
Ga0073909_100019667	3300005526	Surface Soil	MSNEVVVHKGRTNIIRVRLGIDVSADTITSQIRSEPDVESPLLAEWDVSFETDGTDGNLILLLDDLITGQIAADGGFMDLNRVSGGEPLPVFDRPLEVSFRGTVTA*
Ga0070693_1004263472	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MANTVVVHKGRTNIITVAMGIDVSADEITSEIRSEPDQSSPLLAAWIVEFTNDGTDGELTLTLDDVVTSQIVANSGYMDIKRISNGEPLPVFDKPLEVTFRGTVTE*
Ga0074477_15444793	3300005826	Sediment (Intertidal)	MSAVIVHVGLTNTLEVDVGVDVSADTLTSEIRTLPKRDGTLIATWNLVKTTDGTDGLLTLTLDNTITEQIVAAEGWMDIRRVVGGEPVPLFDQPLRVEFRGTVTN*
Ga0081455_101608715	3300005937	Tabebuia Heterophylla Rhizosphere	MSSKVIVHKGRTNTLTVNLGIDVSADTITSEIRSEPNQTAPLIATWNVTKVSGGTTGQLILTLDDLQTSQIKANSGYMDIKRVTGSEPVPVFDQPLEVSFRGTVTV*
Ga0068871_1011837812	3300006358	Miscanthus Rhizosphere	MSNEIIVHKGRTNVLTVDMGIDVSADSFTSQIRSEPHQTAPLICEWEVAFETDGTDGKLILTLDDLATSQIKATSGYMDIKRVTGSEPVSAFDVPLEVAFRGTVTV*
Ga0079218_122852253	3300007004	Agricultural Soil	KGGYWMSHALVVHKGRTNIVTVGLGQDVSGETFTSEIRSEPDQAAPLLMTWQVTFATNGDDGELILTVDNLVTEQIKATSGFMDLKRMVGTEPIPVFDRPLEVEFRGSVTV*
Ga0102931_14028871	3300007984	Pond Soil	TERKKVGEMSNQVIVHKGRTNTLTVSMGMDVSGDTLTSEVRSAANQSAPLIATWNLVFATDGTDGELILTMDDAVTSSIEDDRGYMDIKRVTGGEPVPVFDRPLEVIFRGTVTS*
Ga0105098_101864532	3300009081	Freshwater Sediment	MSNKIIVHKGRTNTLTVDLGINVSADTITSEIRSEPDSSSPLIATWTVSFATTGVDGKLILSLDDNDTRQIKATSGYMDLKRVTGSEPVPVFDRPLEVSFRGTVTL*
Ga0105098_102146761	3300009081	Freshwater Sediment	KFPRGVIFWDVSGGSVQGRSRMSSKVIVHKSRTNVIGVSMGMDVSGDTITSEIRSEPDIEAPLIATWEVSFKTDGTDGELILIIDDLESGQIKANSGYMDLKRIVDGEPLAVFDTPLEVSFRGSVTA*
Ga0105245_100481166	3300009098	Miscanthus Rhizosphere	MGIDVSADTITSEIRSEANYDSPLLATWIVTHTPGKPNELILTLDDLATRQIKANSGYMDIKRVTGSEPVPVFDRPLEVTFRGTVTA*
Ga0105091_1000003362	3300009146	Freshwater Sediment	MGMDVSGDTITSEIRSEPDIEAPLIATWEVSFKTDGTDGELILIIDDLESGQIKANSGYMDLKRIVDGEPLAVFDTPLEVSFRGSVTA*
Ga0105091_101211012	3300009146	Freshwater Sediment	MGMDISTETYTSQIRSTPNQDATLIAEWVVTFETDGTDGKLKLVLDDLATSQIKATSGFMDLKRMISTEPFAAFDKPLEVTFRGTVTV*
Ga0105091_102022883	3300009146	Freshwater Sediment	MSNKVIVHKNRTNTLTVSMGMDVSGDTITSEIRSEPDIEAPLIATWVVTFKTDGTDGELILTIDDLEASQIRANSGYMDLKRIVDGEPLAVFDMALEVSFRGSVTA*
Ga0105092_102515392	3300009157	Freshwater Sediment	MMSNEVIVHKGRTNIVIVDMGMDISTETYTSQIRSTPNQDATLIAEWVVTFETDGTDGKLKLVLDDLATSQIKATSGFMDLKRMISTEPFAAFDKPLEVTFRGTVTV*
Ga0114978_100318191	3300009159	Freshwater Lake	MSNQVIVHKSRTNTLLVDLGIDVSSDTITSEIRSEPNSDSPLLATWVVAFVTDGSDGELVFTLDNTFTSQITATSGYMDVKRVTSGEPVPVFDKPLEVVFRGTVTE*
Ga0105104_100769161	3300009168	Freshwater Sediment	MSNEIIVQKNRFNVVTVDLGIDVSAEVITSQIRSEPHQDAPLIAEWDVDFATDGTDGKLILTLTTLATSEIKATSGFMDLKRQANIESLPGFDSPLAVTFQGTVTV*
Ga0127401_10655133	3300009469	Meromictic Pond	PGIDVSTDAITSEIRTEPNVDSPLIATWVVAFTTDGTDGELTLTLDDTFTSQITVAGGFMDLKRVTGGEPVPVFDKPLEVVFRGTVTQ*
Ga0105347_100036721	3300009609	Soil	MSSKIIVHKGRTNILTVSLGINVSADTITSEIRSEPNQDSPLIATWVVSFKTTGADGELILRLDDSVTSQIKANSGYMDLKRITGAEPIAVFDTPLEVSFRGTVTV*
Ga0105347_10144521	3300009609	Soil	MSNKVIVHKGRTNIITVSLGSDVSADTITSEIRSEPNQDAPLIATWTVPFATNGSDGKLILKLDDNETGQIKANSGYMDLKRITGSEPVPVFDRPLEVSFRGTVTA*
Ga0105340_100095715	3300009610	Soil	MTSKVVVHKGRTNTVTIDLGIDVSGDTFTSEIRSEPTQDAPLIATWVVTFATNGSDGKLVLKLDNTATSQIKANSGYMDLKRVTGSEPVPVFDRPLEVSFRGTVTV*
Ga0105340_10032841	3300009610	Soil	QKFPRGVIFRDVSGGSVRGRSRMSNKVIVHKNRTNTLTVSMGMDVSGDTITSEIRSEPDIEAPLIATWVVTFKTDGTDGELILTIDDLEASQIRANSGYMDLKRIVDGEPLAVFDMALEVSFRGSVTA*
Ga0105340_11047373	3300009610	Soil	MGMDVSGDTITSEIRSEPDIEAPLIATWEVSFKTDGTDGELILVIDDLESGQIKANSGYMDLKRIVDGEPLAVFDTPLEVSFRGSVTA*
Ga0126377_127902652	3300010362	Tropical Forest Soil	MGMNVSADTFTSEIRTEPTVESPLICTWTVSFVTTGADGQLLLKLDDSVTAQIEPSSGYMDLKRVTGGEPVPVFDAPLEVDFRETV
Ga0137432_10471353	3300011439	Soil	MSNKVIVHKGRTNTVTIDLGIDVSGDTFTSEIRSEPTQDAPLIATWVVTFATNGSDGKLVLKLDNTATSQIKANSGYMDLKRVTGSEPVPVFDRPLEVSFRGTVTV*
Ga0137344_10027131	3300012159	Soil	MSSKIIVHKGRTNILTVSLGINVSADTFTSEIRSEPDQAAPLIATWVVSFKTTGADGELILRLDDNETRQIKANSGYMDLKRVTGSEPVPVFDMPLEVSFRGTVTA*
Ga0150985_1059087612	3300012212	Avena Fatua Rhizosphere	MTSKVIVHKNRTNVITVSMGIDVSADTITSEIRSEPDIESPLIATWDVSYKTNGADGELILTLDDLETSQIRANSGYMDLKRIVNGEPFSVFDMALEVSFRGSVTA*
Ga0150985_1138371752	3300012212	Avena Fatua Rhizosphere	MSNKVIVHKGRTNTVRVNLGIDVSADIITSEIRSEPDVAAPLIATWTVDFVNDGTDGELLLTLDDGDTKDITANSGFMDLKRVTQGEPVPVFDTPLEVVFRGTVTE*
Ga0157353_10410782	3300012496	Unplanted Soil	DTITSEIRSQPDSDSPLIAAWTVTFDTDGADGELILTMDDISITANSGYMDIKRVASGQPYPVFDRPLEVEFRGTVTL*
Ga0136616_101713522	3300012679	Polar Desert Sand	MSNEVVVFKGRTNIITVSMGIDVSLSTFTSQIRTEPDSSAPLIANWDVAFTTNGVDGELTLTLDDLVTSQIKVNSGYMDLKRISGAEPIPVFDRPLEVAFRGSVTL*
Ga0157309_100206542	3300012895	Soil	MSNEVVIHKGRTNIITVSLGINVSADTITSEIRSEPDVNAPLIATWIVSFATNGADGELIFRLDDSATAGIKANSGFMDIKRMSGGEPIPVFDRPLEVSIRGSVTA*
Ga0157292_100196672	3300012900	Soil	MSNSVVIHKGRTNIITVSLGINVSADTITSEIRSEPDVNAPLIATWIVSFATNGADGELIFRLDDSATAGIKANSGFMDIKRVSAGEPIPVF
Ga0163162_123096422	3300013306	Switchgrass Rhizosphere	MSNEVIVHKGRTNTLRIAMGQDVSADVITSEIRSQADVEAPLLATWDVDFETDGHDGMLILTLDDLVTSQIAATIGYMDLKRVVGGEPIPVFDRPLEVSFRGTVTE*
Ga0132256_1028972211	3300015372	Arabidopsis Rhizosphere	TITSEIRSQPDSDSPLIAAWTVTFDTDGADGELILTMDDISITANSGYMDIKRVASGQPYPVFDRPLEVEFRGTVTL*
Ga0163161_117057191	3300017792	Switchgrass Rhizosphere	MSNEIIVHKGRTNVLTVDMGIDVSADSFTSQIRSEPHQTAPLICEWEVAFETDGTDGKLILTLDDLATSQIKATSGYMDIKRVTGSEPVSAFDVPLEVA
Ga0181581_107107052	3300017962	Salt Marsh	MSNQVVVHKGRTNTLTVDLGIDVSNDTITSEIRSDPDVDSPLLATWVVAFTTNGTDGELTLTLDDTYTSQITAASGFMDIKRVTGGEPVPVFDKPLEV
Ga0187788_100894092	3300018032	Tropical Peatland	MSSQIIIHKGRSNVETVSLGIDVSADMITSQIRSEPNQESPLIATWAVTFKTDGTDGELILTLSDVITSQITATSGYMDLKRVTGSHPVPVFDQPLEVVFRGTVTT
Ga0187788_105304642	3300018032	Tropical Peatland	MSSQIIIHKGRTNVVTVSLGIDVSADTITSQIRSEPDQESPLLATWVVTFKTNGADGELILTLSDVVTSQITATSGYMDIKRITGAHPVPVFDQPLEVVFRGTV
Ga0181591_107861252	3300018424	Salt Marsh	MSNQVVVHKGRTNTLTVDLGIDVSNDTITSEIRSDPDVDSPLLATWVVAFTTNGTDGELTLTLDDTYTSQITAASGFMDIKRVTGGEPVPVFDKPLEVIFRGTVTQ
Ga0190274_127294802	3300018476	Soil	QINMGMDVSASTFTSEIRSDPDFKSPLIAAWEVSFLTDGKDGKLVLRLDDSITKEINPTSGFMDLKRISGAEPIPVFDRPLEVTFRGTVTA
Ga0190271_100214996	3300018481	Soil	MSNEIVVLKGRYNVVTVDLGIDVSGETITSQIRSEAHLEAPLIAEWEVAFETDGADGKLILTLDTLTTSQIKASSGFMDVKRQSNTEALPGFDAPLAVTFQGSVTL
Ga0190271_112676852	3300018481	Soil	MSNEVVVHKGRTNTLRIRLGINVSADTFTSEIRTEPTSESPLIATWNVAFSTTGADGELTLTMDDLITGQIKQSGGYMDLKRVTGGEPVPVFDRPLEVTFRGTVTE
Ga0190271_114430682	3300018481	Soil	MSNEIIVHKGRTNTLYINMGIDVSADTITSEIRSEPDLESPLIATWVVDYLTDGVDGKLVLVLDDLTTSQIAADRGYMDLKRISGAEPLPVFDQPLEVAFRGTVTL
Ga0211726_108576351	3300020161	Freshwater	RTNTLLVDLGVDVSDDTITSEIRSEPNSDSPLLATWVVNFVTDGSDGELVFTLDDTFTAQITATSGYMDVKRVTGGEPVPVFDKPLEVVFRGTVTE
Ga0208852_10347131	3300020560	Freshwater	MSNQVIVHKSRTNTLLVDLGVDVSDDTITSEIRSEPNSDSPLLATWVVNFVTDGSDGELVFTLDDTFTAQITATSGYMDVKRVTGGEPVPVFDKPLEVVFRGTVTE
Ga0210349_10760381	3300021298	Estuarine	MSAVIVHVGLTNTLEVDVGVDVSADTLTSEIRTLPKRDGTLIATWNLVKTTDGTDGLLTLTLDNTITEQIVAAEGWMDIRRVVGGEPVPLFDQPLRVEFRGTVTN
Ga0222714_101542171	3300021961	Estuarine Water	LYFSPGVKKAQCFHFLGGTMSNQVIVHKGRTNTLLVDLGIDVSSDTITSEIRSEPNVDAPLLATWVVAFTTDGTDGELTFTLDDTFTSQITAQSGYMDIKRVTGGEPVPVFDKPLEVVFRGTVTQ
Ga0222714_105937242	3300021961	Estuarine Water	MSNAVIVHIGRTNTLTVDLGVDVSADTITSEIRSEPRADAPLIATWSVVKTNGGADGELTLTLDDVITAQITAASGWMDIKRVTGGEPVPVFDKPLEVVFRGTVTA
Ga0222713_100371101	3300021962	Estuarine Water	MSNQVIVHKGRTNTLLVDLGIDVSSDTITSEIRSEPNVDAPLLATWVVAFTTDGTDGELTFTLDDTFTSQITAQSGYMDIKRVTGGEPVPVFDKPLEVVFRGTVTQ
Ga0193742_100014370	3300021976	Soil	MSSEIVVHKGRTNIITVSLGIDVSADTITSEVRSEPDVSAPLLMEWDVTFDTDGTDGELVLTVDDVITAGVAANSGYMDLKRVSGGEPIAVFDRPLEVTFRGSVTE
Ga0247779_11568931	3300022908	Plant Litter	MSNEVVIHKGRTNIITVSLGINVSADTITSEIRSEPDVNAPLIATWIVSFATNGADGELIFRLDDSATAGIKANSGFMDIKRMSGGEPIPVFDRPLEVSIRGSVTA
Ga0247762_11497821	3300023169	Plant Litter	MSNSVVIHKGRTNIITVSLGINVSADTITSEIRSEPDVNAPLIATWIVSFATNGADGELIFRLDDSATAGIKANSGFMDIKRVSAGEPIPVFDRPLEVTIQGSVTA
(restricted) Ga0255039_101493122	3300024062	Seawater	VSGHLIVYKNRTNKITVSLGIDVSADTITSEIRVGKDVSTDLIATWNVAFLTDGTDGELVLTLDDSDTENIAHRGGYMDIKRLSGGEPLVTHLDPIPVVIQGVVTA
Ga0247690_10005412	3300024287	Soil	MSNEIIVHKGRTNIVTVDFGVNIQDDVFTSQIRSGPSQDAPLIVEWDVSFQTDGSDGKLILTIDDLASSQIAATSGFMDIKRVSGSESFAAFDKPLEVTFQGTVTV
Ga0247690_100116410	3300024287	Soil	MSNEVVVHKGRTNVVTVDMGIDVSADTLTSEIRSEPNQGAPLIATWVVAFATDGTDGKLILTLDDLATSQIKATSGFMDIKRVTGSEAVAVFDKPLEVTFRGTVTV
Ga0207659_117714731	3300025926	Miscanthus Rhizosphere	MTSKIVVHKGRTNTLTVDMGIDVSADTITSEIRSEANYDSPLLATWIVTHTPGKPNELILTLDDLATRQIKANSGYMDIKRVTGSEPVPVFDRPL
Ga0207687_107432822	3300025927	Miscanthus Rhizosphere	MTSKIVVHKGRTNTLTVDMGIDVSADTITSEIRSEANYDSPLLATWIVTHTPGKPNELILTLDDLATRQIKANSGYMDIKRVTGSEPVPVFDRPLEVTFRGTVTA
Ga0207701_113479261	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MSNEVIVHKGRTNTLRIAMGQDVSADVITSEIRSQADVEAPLLATWDVDFETDGHDGMLILTLDDLVTSQIAATIGYMDLKRVVGGEPIPVFDRPLEVSFRGTVTE
Ga0207689_110513222	3300025942	Miscanthus Rhizosphere	VVHKGRTNTLTVDMGIDVSADTITSEIRSEANYDSPLLATWIVTHTPGKPNELILTLDDLATRQIKANSGYMDIKRVTGSEPVPVFDRPLEVTFRGTVTA
Ga0207648_106925792	3300026089	Miscanthus Rhizosphere	MTSKIVVHKGRTNTLTVDMGIDVSADTITSEIRSEANYDSPLLATWIVTHTPGKPNELIHTLDDLATRQIKANSGYMDIKRVTGSEPVPVYDRPLEVTFRGTVTA
Ga0207923_1003221	3300026643	Soil	MSGKVIVYKNRTNVITVSLGIDVSADTITSEIRSEPDVNSPLIATWVVSFKTDGKDGELILKLDDLYTSQIKANSGYMDLKRISGSEPLAVFDQPLEVAFRGAVT
Ga0208068_1000834	3300026675	Soil	MSGKVVVYKNRTNVITVSLGIDVSADTITSEIRSEADVNSPLIATWVVSYKTDGKDGELILTLDDLYTSQIRANSGYMDLKRISGSEPLAVFDQPLEVAFRGAVTQ
Ga0208685_10002943	3300027513	Soil	MSSKIIVHKGRTNILTVSLGINVSADTITSEIRSEPNQDSPLIATWVVSFKTTGADGELILRLDDSVTSQIKANSGYMDLKRITGAEPIAVFDTPLEVSFRGTVTV
Ga0208185_10130152	3300027533	Soil	MTSKVVVHKGRTNTVTIDLGIDVSGDTFTSEIRSEPTQDAPLIATWVVTFATNGSDGKLVLKLDNTATSQIKANSGYMDLKRVTGSEPVPVFDRPLEVSFRGTVTV
Ga0208185_10310414	3300027533	Soil	MSNKVIVHKNRTNTLTVSMGMDVSGDTITSEIRSEPDIEAPLIATWVVTFKTDGTDGELILTIDDLEASQIRANSGYMDLKRIVDGEPLAVFDMALEVSFRGSVTA
Ga0209356_10155744	3300027644	Freshwater Lake	LMSNQVVVHKGRTNKVLVDLGVNVSADTITSQIRSEPRSDSTLIATWVVAKVDGGVNGELTLTLDDSATSNITVLTGYMDIKRIVSGEPIPVFDKPLEVVFRGTVTL
Ga0209077_10000161	3300027675	Freshwater Sediment	MSSKVIVHKSRTNVIGVSMGMDVSGDTITSEIRSEPDIEAPLIATWEVSFKTDGTDGELILIIDDLESGQIKANSGYMDLKRIVDGEPLAVFDTPLEVSFRGSVTA
Ga0209077_11281921	3300027675	Freshwater Sediment	TLTVDLGINVSADTITSEIRSEPDSSSPLIATWTVSFATTGVDGKLILSLDDNDTRQIKATSGYMDLKRVTGSEPVPVFDRPLEVSFRGTVTL
Ga0209769_12622331	3300027679	Freshwater Lake	VSDDTITSEIRSEPNSDSPLLATWVVNFVTDGSDGELVFTLDDTFTAQITATSGYMDVKRVTGGEPVPVFDKPLEVVFRGTVTE
Ga0209443_10005431	3300027707	Freshwater Lake	KVLVDLGVNVSADTITSQIRSEPRSDSTLIATWVVAKVDGGVNGELTLTLDDSATSNITVLTGYMDIKRIVSGEPIPVFDKPLEVVFRGTVTL
Ga0209819_102896542	3300027722	Freshwater Sediment	MSNEVIVHKGRTNIVIVDMGMDISTETYTSQIRSTPNQDATLIAEWVVTFETDGTDGKLKLVLDDLATSQIKATSGFMDLKRMISTEPFAAFDKPLEVTFRGTVTV
Ga0209442_10526813	3300027732	Freshwater Lake	MSNQVVVHKGRTNKVLVDLGVNVSADTITSQIRSEPRSDSTLIATWVVAKVDGGVNGELTLTLDDSATSNITVLTGYMDIKRIVSGEPIPVFDKPLEVVFRGTVTL
Ga0209593_100003841	3300027743	Freshwater Sediment	PKNSPGVIFEECFRGQRGSMTSKVIVHKSRVNVITVSMGINVSADVITSEIRSEPDVNAPLIATWDVAFKTDGTDGELILTLDDLETSQIKANSGYMDLKRVVNGEPFSVFDMALEVSFRGSVTA
Ga0209500_100460643	3300027782	Freshwater Lake	MSNQVIVHKSRTNTLLVDLGIDVSSDTITSEIRSEPNSDSPLLATWVVAFVTDGSDGELVFTLDNTFTSQITATSGYMDVKRVTSGEPVPVFDKPLEVVFRGTVTE
Ga0209246_103586311	3300027785	Freshwater Lake	QVIVHKSRTNTLLVDLGVDVSDDTITSEIRSEPNSDSPLLATWVVNFVTDGSDGELVFTLDDTFTAQITATSGYMDVKRVTGGEPVPVFDKPLEVVFRGTVTE
Ga0209811_100024292	3300027821	Surface Soil	MSNEVVVHKGRTNIIRVRLGIDVSADTITSQIRSEPDVESPLLAEWDVSFETDGTDGNLILLLDDLITGQIAADGGFMDLNRVSGGEPLPVFDRPLEVSFRGTVTA
Ga0209974_100600403	3300027876	Arabidopsis Thaliana Rhizosphere	MAGERVIVHKGRTNTITVGLGIDVSADTITSEVRSEPSQDAPLIMTWTVSFADDGTDGELILTVDNLITSEIKATSGFMDLKRVSGSEPLSVFDQPIEVEFRGTVTA
Ga0265348_1002693	3300028009	Plant Litter	MSSKIVVHKDRTNILTVSLGIDVSADIITSEIRSEPDVEAPLIATWAVSFKTDGTDGELILRLDDIDTAQIKANSGYMDLKRVVGDEPFAVFDQAVEVVFRGSVTL
Ga0135211_10164693	3300029293	Marine Harbor	MSSSDPIVVHKGRTNIVTLSLGIDTSGDTITSEIRSQPEQDAPLLATWVVTPVTDGSDGRYTLTLDNTVTSQITVKSGFMDVKRVSGGEPLPVFDRPLEVEFRGTVTA
Ga0307380_105287372	3300031539	Soil	MGKAVIVHKGRTNTLQVNLGVDVSTDTITSEIRSEPEISSPLIAAWSVAYATDGTDGEMIFTLDNTITEQITASSGFMDVKRVSGGEPLSVFDKPLEVIFQGSVTA
Ga0334986_0557865_176_496	3300034012	Freshwater	MSNQVIVHKGRTNTLLVDLGIDVSSDTITSEIRSEPNVDSPLLATWVVAFTTDGTDGELTFTIDDTFTSQITAQSGYMDIKRVTGGEPVPVFDKPLEVVFRGTVTQ
Ga0334983_0066640_105_425	3300034060	Freshwater	MSNQVIVHKSRTNTLLVDLGIDVSDDTITSQIRSEPNSDSPLLATWVVAFVTDGTDGELVFTLDDTFTSQITANSGYMDVKRVTGGEPVPVFDKPLEVVFRGTVTE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters