NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F103385

Metagenome Family F103385

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F103385
Family Type Metagenome
Number of Sequences 101
Average Sequence Length 67 residues
Representative Sequence MIPTKRKMKRKELIDRVQTLEYVLSNVINNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSTESESK
Number of Associated Samples 89
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 55.45 %
% of genes near scaffold ends (potentially truncated) 30.69 %
% of genes from short scaffolds (< 2000 bps) 70.30 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (83.168 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(56.436 % of family members)
Environment Ontology (ENVO) Unclassified
(97.030 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(91.089 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 82.86%    β-sheet: 0.00%    Coil/Unstructured: 17.14%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF03592Terminase_2 1.98
PF12705PDDEXK_1 1.98
PF13392HNH_3 1.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG3728Phage terminase, small subunitMobilome: prophages, transposons [X] 1.98


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A83.17 %
All OrganismsrootAll Organisms16.83 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000255|LP_F_10_SI03_135DRAFT_1023162Not Available1147Open in IMG/M
3300000325|SI39nov09_100mDRAFT_1077352Not Available503Open in IMG/M
3300001450|JGI24006J15134_10170851Not Available691Open in IMG/M
3300001743|JGI24515J20084_1002128Not Available1760Open in IMG/M
3300002484|JGI25129J35166_1017113Not Available1734Open in IMG/M
3300002514|JGI25133J35611_10022380Not Available2477Open in IMG/M
3300002514|JGI25133J35611_10099985All Organisms → cellular organisms → Bacteria857Open in IMG/M
3300002518|JGI25134J35505_10012752All Organisms → Viruses → Predicted Viral2735Open in IMG/M
3300002519|JGI25130J35507_1004536All Organisms → Viruses → Predicted Viral3872Open in IMG/M
3300002760|JGI25136J39404_1030213Not Available991Open in IMG/M
3300003492|JGI26245J51145_1008311All Organisms → Viruses → Predicted Viral2428Open in IMG/M
3300003496|JGI26241J51128_1002288Not Available8694Open in IMG/M
3300003618|JGI26381J51731_1048793Not Available971Open in IMG/M
3300004111|Ga0008651_10131124Not Available792Open in IMG/M
3300005398|Ga0066858_10099168Not Available850Open in IMG/M
3300005428|Ga0066863_10161171Not Available803Open in IMG/M
3300005509|Ga0066827_10057894All Organisms → Viruses → Predicted Viral1486Open in IMG/M
3300005520|Ga0066864_10033469Not Available1574Open in IMG/M
3300005592|Ga0066838_10146723Not Available664Open in IMG/M
3300006076|Ga0081592_1084754Not Available1304Open in IMG/M
3300006340|Ga0068503_10071574All Organisms → Viruses → Predicted Viral2038Open in IMG/M
3300006736|Ga0098033_1058489Not Available1125Open in IMG/M
3300006736|Ga0098033_1099153Not Available829Open in IMG/M
3300006750|Ga0098058_1064833Not Available1015Open in IMG/M
3300006751|Ga0098040_1075772Not Available1026Open in IMG/M
3300006754|Ga0098044_1047363All Organisms → Viruses → Predicted Viral1840Open in IMG/M
3300006789|Ga0098054_1000932Not Available15770Open in IMG/M
3300006793|Ga0098055_1348582Not Available550Open in IMG/M
3300006923|Ga0098053_1112613Not Available547Open in IMG/M
3300006927|Ga0098034_1093451Not Available863Open in IMG/M
3300008050|Ga0098052_1019579All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes3246Open in IMG/M
3300008216|Ga0114898_1007340Not Available4581Open in IMG/M
3300008219|Ga0114905_1012509Not Available3517Open in IMG/M
3300008220|Ga0114910_1004351Not Available5885Open in IMG/M
3300009173|Ga0114996_10093365Not Available2573Open in IMG/M
3300009375|Ga0118721_1047392Not Available2147Open in IMG/M
3300009409|Ga0114993_10493965Not Available910Open in IMG/M
3300009414|Ga0114909_1081947Not Available905Open in IMG/M
3300009602|Ga0114900_1188216Not Available512Open in IMG/M
3300009622|Ga0105173_1054792Not Available678Open in IMG/M
3300009786|Ga0114999_10751819Not Available725Open in IMG/M
3300010151|Ga0098061_1026275Not Available2364Open in IMG/M
3300010151|Ga0098061_1314021Not Available538Open in IMG/M
3300010153|Ga0098059_1254249Not Available677Open in IMG/M
3300010883|Ga0133547_10450569Not Available2615Open in IMG/M
3300017702|Ga0181374_1004947All Organisms → Viruses → Predicted Viral2500Open in IMG/M
3300017703|Ga0181367_1097356Not Available505Open in IMG/M
3300017704|Ga0181371_1011178All Organisms → Viruses → Predicted Viral1526Open in IMG/M
3300017775|Ga0181432_1034537Not Available1369Open in IMG/M
3300020364|Ga0211538_1224017Not Available528Open in IMG/M
3300020423|Ga0211525_10038446All Organisms → Viruses → Predicted Viral2346Open in IMG/M
3300020447|Ga0211691_10326337Not Available610Open in IMG/M
3300021087|Ga0206683_10054274Not Available2261Open in IMG/M
3300022225|Ga0187833_10035810All Organisms → Viruses → Predicted Viral3619Open in IMG/M
3300022227|Ga0187827_10011699Not Available8923Open in IMG/M
3300022227|Ga0187827_10113319Not Available1979Open in IMG/M
(restricted) 3300023210|Ga0233412_10158809Not Available971Open in IMG/M
(restricted) 3300024259|Ga0233437_1129090All Organisms → Viruses → Predicted Viral1193Open in IMG/M
3300025045|Ga0207901_1007227Not Available1591Open in IMG/M
3300025049|Ga0207898_1001540Not Available2437Open in IMG/M
3300025049|Ga0207898_1016008Not Available941Open in IMG/M
3300025052|Ga0207906_1007784All Organisms → Viruses → Predicted Viral1520Open in IMG/M
3300025072|Ga0208920_1013513Not Available1808Open in IMG/M
3300025072|Ga0208920_1032487Not Available1086Open in IMG/M
3300025072|Ga0208920_1041630Not Available934Open in IMG/M
3300025078|Ga0208668_1088327Not Available546Open in IMG/M
3300025096|Ga0208011_1009341Not Available2774Open in IMG/M
3300025097|Ga0208010_1031691Not Available1235Open in IMG/M
3300025109|Ga0208553_1022218Not Available1674Open in IMG/M
3300025109|Ga0208553_1048103Not Available1060Open in IMG/M
3300025112|Ga0209349_1022580Not Available2201Open in IMG/M
3300025118|Ga0208790_1029161Not Available1832Open in IMG/M
3300025128|Ga0208919_1035451All Organisms → Viruses → Predicted Viral1782Open in IMG/M
3300025131|Ga0209128_1029801Not Available2232Open in IMG/M
3300025133|Ga0208299_1022168Not Available2795Open in IMG/M
3300025141|Ga0209756_1016427Not Available4490Open in IMG/M
3300025141|Ga0209756_1074233All Organisms → Viruses → Predicted Viral1550Open in IMG/M
3300025218|Ga0207882_1027050Not Available831Open in IMG/M
3300025247|Ga0207880_1001766Not Available5114Open in IMG/M
3300025264|Ga0208029_1004738All Organisms → Viruses → Predicted Viral4434Open in IMG/M
3300025267|Ga0208179_1000787Not Available18508Open in IMG/M
3300025268|Ga0207894_1055390Not Available686Open in IMG/M
3300025270|Ga0208813_1018924Not Available1761Open in IMG/M
3300025274|Ga0208183_1089414Not Available571Open in IMG/M
3300025280|Ga0208449_1075578Not Available840Open in IMG/M
3300025547|Ga0209556_1005111Not Available5289Open in IMG/M
3300025659|Ga0209249_1201873Not Available513Open in IMG/M
3300025873|Ga0209757_10027866Not Available1599Open in IMG/M
3300025873|Ga0209757_10095195Not Available908Open in IMG/M
3300026103|Ga0208451_1016542Not Available801Open in IMG/M
3300026192|Ga0207986_1097187Not Available640Open in IMG/M
3300026199|Ga0208638_1096354Not Available854Open in IMG/M
3300026268|Ga0208641_1089191Not Available888Open in IMG/M
3300028192|Ga0257107_1079644Not Available991Open in IMG/M
3300031801|Ga0310121_10312229Not Available918Open in IMG/M
3300032138|Ga0315338_1079760Not Available1156Open in IMG/M
3300032360|Ga0315334_11463575Not Available586Open in IMG/M
3300034654|Ga0326741_016278Not Available1341Open in IMG/M
3300034654|Ga0326741_025732Not Available1034Open in IMG/M
3300034654|Ga0326741_048438Not Available721Open in IMG/M
3300034656|Ga0326748_035245Not Available693Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine56.44%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean12.87%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine6.93%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater3.96%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater2.97%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater2.97%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.97%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.98%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic1.98%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.98%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine0.99%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine0.99%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.99%
Diffuse Hydrothermal FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluids0.99%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater0.99%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000255Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_F_10_SI03_135EnvironmentalOpen in IMG/M
3300000325Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 100mEnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001743Marine viral communities from the Pacific Ocean - LP-38EnvironmentalOpen in IMG/M
3300002484Marine viral communities from the Pacific Ocean - ETNP_2_130EnvironmentalOpen in IMG/M
3300002514Marine viral communities from the Pacific Ocean - ETNP_6_85EnvironmentalOpen in IMG/M
3300002518Marine viral communities from the Pacific Ocean - ETNP_6_100EnvironmentalOpen in IMG/M
3300002519Marine viral communities from the Pacific Ocean - ETNP_2_300EnvironmentalOpen in IMG/M
3300002760Marine viral communities from the Pacific Ocean - ETNP_6_1000EnvironmentalOpen in IMG/M
3300003492Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_200m_DNAEnvironmentalOpen in IMG/M
3300003496Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_200m_DNAEnvironmentalOpen in IMG/M
3300003618Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_165m_DNAEnvironmentalOpen in IMG/M
3300004111Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_200m_DNAEnvironmentalOpen in IMG/M
3300005398Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201EnvironmentalOpen in IMG/M
3300005428Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253EnvironmentalOpen in IMG/M
3300005509Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV51EnvironmentalOpen in IMG/M
3300005520Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV251EnvironmentalOpen in IMG/M
3300005592Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89EnvironmentalOpen in IMG/M
3300006076Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid AEnvironmentalOpen in IMG/M
3300006340Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770mEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006923Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009375Combined Assembly of Gp0137073, Gp0137074EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009414Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906EnvironmentalOpen in IMG/M
3300009602Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231EnvironmentalOpen in IMG/M
3300009622Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300017702Marine viral communities from the Subarctic Pacific Ocean - Lowphox_10 viral metaGEnvironmentalOpen in IMG/M
3300017703Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaGEnvironmentalOpen in IMG/M
3300017704Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaGEnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300020364Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556021-ERR599037)EnvironmentalOpen in IMG/M
3300020423Marine microbial communities from Tara Oceans - TARA_B100000315 (ERX556027-ERR599062)EnvironmentalOpen in IMG/M
3300020447Marine microbial communities from Tara Oceans - TARA_B100000745 (ERX556090-ERR599159)EnvironmentalOpen in IMG/M
3300021087Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 80m 12015EnvironmentalOpen in IMG/M
3300022225Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300022227Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300023210 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MGEnvironmentalOpen in IMG/M
3300024259 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_200_MGEnvironmentalOpen in IMG/M
3300025045Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)EnvironmentalOpen in IMG/M
3300025049Marine viral communities from the Pacific Ocean - LP-55 (SPAdes)EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025072Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025078Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025096Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025097Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025109Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025131Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025218Marine viral communities from the Deep Pacific Ocean - MSP-103 (SPAdes)EnvironmentalOpen in IMG/M
3300025247Marine viral communities from the Deep Pacific Ocean - MSP-91 (SPAdes)EnvironmentalOpen in IMG/M
3300025264Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)EnvironmentalOpen in IMG/M
3300025267Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)EnvironmentalOpen in IMG/M
3300025268Marine viral communities from the Deep Pacific Ocean - MSP-114 (SPAdes)EnvironmentalOpen in IMG/M
3300025270Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904 (SPAdes)EnvironmentalOpen in IMG/M
3300025274Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51 (SPAdes)EnvironmentalOpen in IMG/M
3300025280Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)EnvironmentalOpen in IMG/M
3300025547Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_150m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025659Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_200m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300026103Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155 (SPAdes)EnvironmentalOpen in IMG/M
3300026192Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89 (SPAdes)EnvironmentalOpen in IMG/M
3300026199Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV51 (SPAdes)EnvironmentalOpen in IMG/M
3300026268Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253 (SPAdes)EnvironmentalOpen in IMG/M
3300028192Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500mEnvironmentalOpen in IMG/M
3300031801Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986EnvironmentalOpen in IMG/M
3300032138Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #8EnvironmentalOpen in IMG/M
3300032360Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915EnvironmentalOpen in IMG/M
3300034654Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244EnvironmentalOpen in IMG/M
3300034656Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 502_2477EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
LP_F_10_SI03_135DRAFT_102316223300000255MarineMKRNELIKRVQTLEYVLSNVIXXARXLELXIDYYVEMXGDVKKFEKFLDKKQEDGNSTKSESK*
SI39nov09_100mDRAFT_107735213300000325MarineKRVQTLEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDGNSTKSESK*
JGI24006J15134_1017085113300001450MarineMIATKRKMKRNELIKRVEALEFVLSKVINSQRNLELVIDYYIEMNKDVKKFEKFLNKKA
JGI24515J20084_100212823300001743MarineMKRNELIKRVQTLEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDGNSTKPESK*
JGI25129J35166_101711323300002484MarineMIATKRKMKRKDLIDRVQTLEYVLSNVITNARNLELIIDYMKGDVKKFEKFLDKKQEDANSAEPESK*
JGI25133J35611_1002238023300002514MarineMIATKRKMKRNDLIKRVQTLEYVLSNVINNARSLELVIDYYVEMKGDVKKFEKFLDKKQEDANSAEPESK*
JGI25133J35611_1009998513300002514MarineIPTKRKMKRKELIDRVQTLEYVLSNVINNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSAEPESK*
JGI25134J35505_1001275263300002518MarineMIPTKRKMKRKELIDRVQTLEYVLSNVINNARNLELIIDYYIEMKGDVKKFEKFLDKKQEDANSSEPESK*
JGI25130J35507_100453653300002519MarineMKRKELIDRVQTLEYVLSNVINNARNLELIIDYYIEMKGDVKKFEKFLDKKQEDANSAEPESK*
JGI25136J39404_103021313300002760MarineRNELIKRVQTLEYVLSNVINNARSLELVIDYYVEMKGDVKKFEKFLDKKQEDGNSTKPESK*
JGI26245J51145_100831123300003492MarineMKRNELIKRVQTLEYVLSNVINNARSLELVIDYYVEMNGDVKKFEKFLDKKQEDGNSTKSESK*
JGI26241J51128_100228883300003496MarineMIATKRKMKRNELIKRVQTLEYVLSNVINNARSLELVIDYYVEMNGDVKKFEKFLDKKQEDGNSTKSESK*
JGI26381J51731_104879313300003618MarineLQKMIATKRKMKRNELIKRVQTLEYVLSNVINNARSLELVIDYYVEMNGDVKKFEKFLDKKQEDGNSTKSESK*
Ga0008651_1013112433300004111MarineMKRNELIKRVQTLEYVLSNVINNARSLELVIDYYVEMNGDVKKFEKFLDKKQE
Ga0066858_1009916823300005398MarineMIPTKRKMKRKELIDRVQTLEYVLSNVINNARNLELIIDYYIEMKGDVKKFEKFLDKKQEDANSAEPESK*
Ga0066863_1016117113300005428MarineMIATKRKMKRNDLIKRVQTLEYVLSNVINNARNLELIIDYYIEMKGDVKKFEKFLDKKQEDANSTESESK*
Ga0066827_1005789423300005509MarineMKRKELIDRVQTLEYVLSNVINNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSSESESK*
Ga0066864_1003346923300005520MarineMKRKDLIDRVQTLEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSSESESK*
Ga0066838_1014672313300005592MarineVLQKMIPTKRKMKRKELIDRVQTLEYVLSNVINNARNLELIIDYYIEMKGDVKKFEKFLDKKQEDANSAEPESK*
Ga0081592_108475413300006076Diffuse Hydrothermal FluidsMIATKRKMKRKDLIDRVHTLEYVLSNVITNARSLELVIDYYVEMNGDVKKFEKFLDKKQEDANSTKSESK*
Ga0068503_1007157453300006340MarineMKRNELIKRVQTLEYVLSNVINNARNLELVIDYYVEMKGDVKKFEKFLDKKQEDGNSTKPESK*
Ga0098033_105848933300006736MarineMIATKRKMKRKDLIDRVQALEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSSESESK*
Ga0098033_109915323300006736MarineIDRVQTLEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSSESESK*
Ga0098058_106483313300006750MarineNMIATKRKMKRNDLIKRVQTLEYVLSNVINNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSTESESK*
Ga0098040_107577223300006751MarineMIPTKRKMKRKELIDRVQTLEYVLSNVINNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSTESESK*
Ga0098044_104736323300006754MarineMIATKRKMKRKDLIDRVQTLEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSTESES
Ga0098054_100093283300006789MarineMIATKRKMKRNELIKRVEALEFVLSKVISSQRNVELIIDYYIEMNGNEEKFQKFLDKKAKDAESSEPKSK*
Ga0098055_134858223300006793MarineMIPTKRKMKRKELIDRVQTLEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSAEPESK*
Ga0098053_111261313300006923MarineMKRNELIKRVEALEFVLSKVISSQRNVELIIDYYIEMNGNEEKFQKFLDKKAKDAESSEPKSK*
Ga0098034_109345123300006927MarineNMIATKRKMKRNDLIKRVQTLEYVLSNVINNARNLELIIDYYIEMKGDVKKFEKFLDKKQEDANSAEPESK*
Ga0098052_101957953300008050MarineMIPTKRKMKRKELIDRVQTLEYVLSNVINNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSSESESK*
Ga0114898_100734033300008216Deep OceanMIATKRKMKRKDLIDRIHTLEYVLSNVITNARSLELVIDYYVEMNGDVKKFEKFLDKKQEDANSTKSESE*
Ga0114905_101250973300008219Deep OceanMIATKRKMKRNELIKRVEALEFVLSKVISSQRNVELIIDYYIEMNGDDEKFQKFLDKKTEDAKSSEPKSK*
Ga0114910_100435123300008220Deep OceanMIATKRKMKRKDLIDRIHTLEYVLSNVITNARSLELVIDYYVEMNGDVKKFEKFLDKKQEDANSTEPESE*
Ga0114996_1009336523300009173MarineMIPTKRKMKREELIERVRTLEVILSKVINSERNLELVINYYIEMKKDEKKFQKFLDKKAEDADNSESQSK*
Ga0118721_104739223300009375MarineMIPTKRKMKRKQLIERVQTLEYVLSNVINNARNLELVIDYYVEMNGHVKKFEKFLDKKAEDATSPKSESE*
Ga0114993_1049396523300009409MarineMIATKRKMKRKDLIDRVQALEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDGNNTKPESK*
Ga0114909_108194713300009414Deep OceanMIPTKRKMKRKELIDRVQALEYVLSNVITNARSLELVIDYYVEMNGDVKKFEKFLDKKQEDANSTKSESE*
Ga0114900_118821623300009602Deep OceanMIPTKRKMKRKELIDRVQALEYVLSNVINNARNLELVIDYYVEMNGDVKKFEKFLDKKQEDANSTEPESE*
Ga0105173_105479223300009622Marine OceanicMIATKRKMKRKELIDRVHTLEYVLSNVITNARNLELIIDYYVEMNGDVKKFEKFLDKKQEDANSTKSESK*
Ga0114999_1075181923300009786MarineMIATKRKMKRNDLIKRVQTLEYVLSNVINNARSLELIIDYYVEMKGDVKKFEKFLDKKQEDGNSTKPESK*
Ga0098061_102627513300010151MarineMIATKRKMKRNELIKRVEALEFVLSKVISSQRNVELIIDYYIEMNGNEEKFQKFLDKKAKDAESSQSKPK*
Ga0098061_131402123300010151MarineMIATKRKMKRNDLIKRVQTLEYVLSNVINNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSAEPESK*
Ga0098059_125424923300010153MarineMIATKRKMKRKDLIDRVQTLEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDAN
Ga0133547_1045056933300010883MarineMIATKRKMKREELIERVKTLEIVLSKVINSERNLELVVNYYIEMNKDEKKFQKFLDKKTEDADASESQSK*
Ga0181374_100494733300017702MarineMIATKRKMKRNDLIKSVQSLEYVLSNVIDNARSLELIIDYYVEMKGDVKKFEKFLDKKQEDANSTESESK
Ga0181367_109735623300017703MarineMIPTKRKMKRKELIDRVQTLEYVLSNVINNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSSEPESK
Ga0181371_101117843300017704MarineMKRKELIDRVQTLEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQE
Ga0181432_103453723300017775SeawaterMIATKRKMKRKDLIDRVQTLEYVLSNVINNARSLELVIDYYVEMNGDVKKFEKFLDKKQEDGNSTKPESK
Ga0211538_122401723300020364MarineVLQKMIPTKRKMKRKELIDRVQTLEYVLSNVINNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSAEPESK
Ga0211525_1003844623300020423MarineMKRNELIKRVQTLEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSTKSESK
Ga0211691_1032633723300020447MarineMIPTKRKMKRNELIKRVQALEFVLSKVINSQRNLELVIDYYIEMNKDVKKFEKFLDKKTENAEISAKK
Ga0206683_1005427423300021087SeawaterMIPTKRKMKRKELIDRVQALEYVLSNVINNARNLELVIDYYVEMNGDVKKFEKFLDKKQEDANSTEPESE
Ga0187833_1003581033300022225SeawaterMKRKELIDRVQTLEYVLSNVINNARNLELIIDYYIEMKGDVKKFEKFLDKKQEDANSAEPESK
Ga0187827_1001169923300022227SeawaterMKRKDLIDRVQTLEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSSESESK
Ga0187827_1011331923300022227SeawaterMIATKRKMKRNDLIKRVQTLEYVLSNVINNARSLELVIDYYVEMKGDVKKFEKFLDKKQEDANSAEPESK
(restricted) Ga0233412_1015880913300023210SeawaterMKRNELIKRVQTLEYVLSNVINNARSLELVIDYYVEMNGDVKKFEKFLDKKQEDGNSTKPESK
(restricted) Ga0233437_112909033300024259SeawaterMKRNELIKRVQTLEYVLSNVINNARSLELVIDYYVEMNGDVKKFEKFLDKKQEDGNSTKSESK
Ga0207901_100722713300025045MarineMKRNELIKRVQTLEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDGNSTKPESK
Ga0207898_100154023300025049MarineMIATKRKMKRKDLIDRVHTLEYVLSNVITNARSLELVIDYYVEMNGDVKKFEKFLDKKQEDANSTKSESK
Ga0207898_101600833300025049MarineMKRNELIKRVQTLEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSTESESK
Ga0207906_100778423300025052MarineMKRNELIKRVQTLEYVLSNVINNARSLELIIDYYVEMKGDVKKFEKFLDKKQEDGNSTKPESK
Ga0208920_101351323300025072MarineMIPTKRKMKRKELIDRVQTLEYVLSNVINNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSTESESK
Ga0208920_103248733300025072MarineMIPTKRKMKRKDLIDRVQTLEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSSESESK
Ga0208920_104163023300025072MarineMIATKRKMKRNDLIKRVQTLEYVLSNVINNARNLELIIDYYIEMKGDVKKFEKFLDKKQEDANSAEPESK
Ga0208668_108832723300025078MarineMIPTKRKMKRKELIDRVQTLEYVLSNVINNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSAEPES
Ga0208011_100934123300025096MarineMIATKRKMKRNDLIKRVQTLEYVLSNVINNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSTESESK
Ga0208010_103169133300025097MarineMIATKRKMKRKDLIDRVQALEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSSESESK
Ga0208553_102221823300025109MarineMIATKRKMKRNDLIKRVQTLEYVLSNVINNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSAEPESK
Ga0208553_104810323300025109MarineMIATKRKMKRKDLIDRVQALEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSSESE
Ga0209349_102258013300025112MarineMKRKDLIDRVQTLEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSSE
Ga0208790_102916113300025118MarineMIATKRKMKRKDLIDRVQTLEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSSES
Ga0208919_103545143300025128MarineMIATKRKMKRNELIKRVEALEFVLSKVISSQRNVELIIDYYIEMNGDDEKFQKFLDKKTEDAKNSEPKSK
Ga0209128_102980133300025131MarineMKRKDLIDRVQTLEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSSES
Ga0208299_102216823300025133MarineMKRKELIDRVQTLEYVLSNVINNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSTESESK
Ga0209756_101642753300025141MarineMIPTKRKMKRKELIDRVQTLEYVLSNVINNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSAEPESK
Ga0209756_107423313300025141MarineMKRKELIDRVQTLEYVLSNVINNARNLELIIDYYIEMKGDVKKFEKFLDKKQEDANSSEPESK
Ga0207882_102705023300025218Deep OceanMIATKRKMKRKELIDRVHTLEYVLSNVITNARNLELIIDYYVEMNGDVKKFEKFLDKKQEDANSTKSESK
Ga0207880_100176663300025247Deep OceanMIATKRKMKRKELIDRVHTLEYVLSNVITNARNLELIIDYYVEMNGDVKKFEKFLDKKREDANSTKSESK
Ga0208029_100473823300025264Deep OceanMIATKRKMKRNELIKRVEALEFVLSKVISSQRNVELIIDYYIEMNGDDEKFQKFLDKKTEDAKSSEPKSK
Ga0208179_1000787173300025267Deep OceanMIATKRKMKRKDLIDRIHTLEYVLSNVITNARSLELVIDYYVEMNGDVKKFEKFLDKKQEDANSTKSESE
Ga0207894_105539023300025268Deep OceanMIATKRKMKRNDLIKRVQTLEYVLSNVINNARNLELIIDYYIEMKGDVKKFEKFLDK
Ga0208813_101892423300025270Deep OceanMIATKRKMKRKDLIDRIHTLEYVLSNVITNARSLELVIDYYVEMNGDVKKFEKFLDKKQEDANSTEPESE
Ga0208183_108941423300025274Deep OceanMKRNELIKRVEALEFVLSKVISSQRNVELIIDYYIEMNGDDEKFQKFLDKKTEDAKSSEPKSK
Ga0208449_107557823300025280Deep OceanDLIDRIHTLEYVLSNVITNARSLELVIDYYVEMNGDVKKFEKFLDKKQEDANSTKSESE
Ga0209556_100511123300025547MarineMIATKRKMKRNELIKRVQTLEYVLSNVINNARSLELVIDYYVEMNGDVKKFEKFLDKKQEDGNSTKSESK
Ga0209249_120187323300025659MarineMIATKRKMKRKDLIDRVQTLEYVLSNVINNARSLELIIDYYVEMKGDVKKFEKFLDKKQEDGNSTESESK
Ga0209757_1002786613300025873MarineRNELIKRVQTLEYVLSNVINNARSLELVIDYYVEMKGDVKKFEKFLDKKQEDGNSTKPES
Ga0209757_1009519513300025873MarineMIATKRKMKRNDLIKRVQTLEYVLSNVINNARSLELVIDYYVEMKGDVKKFEKFLDKRQ
Ga0208451_101654233300026103Marine OceanicMKRKELIDRVHTLEYVLSNVITNARNLELIIDYYVEMNGDVKKFEKFLDKKREDANSTKSESK
Ga0207986_109718713300026192MarineVLQKMIPTKRKMKRKELIDRVQTLEYVLSNVINNARNLELIIDYYIEMKGDVKKFEKFLDKKQEDANSAEPESK
Ga0208638_109635423300026199MarineMIPTKRKMKRKELIDRVQTLEYVLSNVINNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSSESESK
Ga0208641_108919113300026268MarineMIATKRKMKRNDLIKRVQTLEYVLSNVINNARNLELIIDYYIEMKGDVKKFEKFLDKKQEDANSTESESK
Ga0257107_107964433300028192MarineMKRNELIKRVQTLEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDGNNTESESK
Ga0310121_1031222923300031801MarineMIATKRKMKRKDLIDRVQALEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKSEDANSTEPKSK
Ga0315338_107976013300032138SeawaterMIPTKRKMKRKELIDRVQTLEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSSE
Ga0315334_1146357523300032360SeawaterWRITYFNMIATKRKMKRNDLIKRVQTLEYVLSNVINNARSLELIIDYYVEMKGDVKKFEKFLDKKQEDGNSTKPESK
Ga0326741_016278_2_1723300034654Filtered SeawaterMIATKRKMKRKELIDRVHTLEYVLSNVITNARNLELIIDYYVEMNGDVKKFEKFLDK
Ga0326741_025732_725_9373300034654Filtered SeawaterMIATKRKMKRKDLIDRVQALEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKQEDANSTKSESK
Ga0326741_048438_516_7073300034654Filtered SeawaterMKRKELIDRVKTLEYVLSNVITNARNLELIIDYYVEMNGDVKKFENFLDKKQEDANSTKSESK
Ga0326748_035245_503_6913300034656Filtered SeawaterKRKDLIDRVQALEYVLSNVITNARNLELIIDYYVEMKGDVKKFEKFLDKKSEDANSTKSESK


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