NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F103531

Metagenome Family F103531

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F103531
Family Type Metagenome
Number of Sequences 101
Average Sequence Length 108 residues
Representative Sequence MKTLLTTTFIAIALVAFSAPVQAKDDDFNSVVKMIEQFYEVKHQGIPFLAKAGMKVATTAARIKGGQAKRIAEAGSIKLAVFEDQAFNGDFMKFRASLNGALNDTWMPLIQT
Number of Associated Samples 85
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 97.01 %
% of genes near scaffold ends (potentially truncated) 65.35 %
% of genes from short scaffolds (< 2000 bps) 61.39 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (66.337 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(10.891 % of family members)
Environment Ontology (ENVO) Unclassified
(50.495 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(63.366 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 57.86%    β-sheet: 0.00%    Coil/Unstructured: 42.14%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF14060DUF4252 75.25
PF08281Sigma70_r4_2 3.96
PF02517Rce1-like 1.98
PF06925MGDG_synth 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG1266Membrane protease YdiL, CAAX protease familyPosttranslational modification, protein turnover, chaperones [O] 1.98
COG4449Predicted protease, Abi (CAAX) familyGeneral function prediction only [R] 1.98
COG0707UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferaseCell wall/membrane/envelope biogenesis [M] 0.99

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms66.34 %
UnclassifiedrootN/A33.66 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000559|F14TC_101669934All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium550Open in IMG/M
3300000956|JGI10216J12902_103678704All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1740Open in IMG/M
3300000956|JGI10216J12902_126921009All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium573Open in IMG/M
3300003324|soilH2_10227401All Organisms → cellular organisms → Bacteria1700Open in IMG/M
3300004479|Ga0062595_100298832All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1083Open in IMG/M
3300004479|Ga0062595_101901132All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium570Open in IMG/M
3300005295|Ga0065707_10429734All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium821Open in IMG/M
3300005334|Ga0068869_100085859All Organisms → cellular organisms → Bacteria2358Open in IMG/M
3300005334|Ga0068869_100832075All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium795Open in IMG/M
3300005338|Ga0068868_100506545All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1058Open in IMG/M
3300005340|Ga0070689_100087991All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia2444Open in IMG/M
3300005345|Ga0070692_10340041All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium929Open in IMG/M
3300005345|Ga0070692_10768287All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium655Open in IMG/M
3300005353|Ga0070669_100178857All Organisms → cellular organisms → Bacteria1658Open in IMG/M
3300005354|Ga0070675_100928427All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium798Open in IMG/M
3300005438|Ga0070701_10154544All Organisms → cellular organisms → Bacteria1324Open in IMG/M
3300005440|Ga0070705_100652463All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium821Open in IMG/M
3300005546|Ga0070696_101634169All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium554Open in IMG/M
3300005547|Ga0070693_100174314All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1380Open in IMG/M
3300005564|Ga0070664_101684749All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium601Open in IMG/M
3300005617|Ga0068859_100800082All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1030Open in IMG/M
3300005719|Ga0068861_100423914All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1186Open in IMG/M
3300006196|Ga0075422_10130420All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium989Open in IMG/M
3300006804|Ga0079221_11661717All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium519Open in IMG/M
3300006844|Ga0075428_100496676All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1306Open in IMG/M
3300006845|Ga0075421_100659581All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1221Open in IMG/M
3300006904|Ga0075424_100587315All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1190Open in IMG/M
3300006969|Ga0075419_10483152All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium859Open in IMG/M
3300009092|Ga0105250_10570523All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium521Open in IMG/M
3300009094|Ga0111539_10803004All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1095Open in IMG/M
3300009100|Ga0075418_11789344All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium668Open in IMG/M
3300009147|Ga0114129_10187331All Organisms → cellular organisms → Bacteria → Acidobacteria2811Open in IMG/M
3300009162|Ga0075423_12970340All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium520Open in IMG/M
3300009177|Ga0105248_12048383All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium650Open in IMG/M
3300009553|Ga0105249_12816903All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium558Open in IMG/M
3300009789|Ga0126307_10655649All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium847Open in IMG/M
3300010038|Ga0126315_11193097All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium517Open in IMG/M
3300010039|Ga0126309_11113448All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300010041|Ga0126312_11015116All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium607Open in IMG/M
3300010044|Ga0126310_10418374All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium959Open in IMG/M
3300010045|Ga0126311_10596725All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium874Open in IMG/M
3300010401|Ga0134121_11711402All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium652Open in IMG/M
3300010401|Ga0134121_12183546All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium590Open in IMG/M
3300011119|Ga0105246_11304553All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium673Open in IMG/M
3300013306|Ga0163162_12935183All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium548Open in IMG/M
3300013760|Ga0120188_1010547All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium830Open in IMG/M
3300014325|Ga0163163_10741941All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1045Open in IMG/M
3300014326|Ga0157380_12287260All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium605Open in IMG/M
3300018432|Ga0190275_10379259All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1417Open in IMG/M
3300021445|Ga0182009_10110949All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1263Open in IMG/M
3300021445|Ga0182009_10418987All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium695Open in IMG/M
3300025908|Ga0207643_10148779All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1403Open in IMG/M
3300025911|Ga0207654_11285906All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300025912|Ga0207707_10291333All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1412Open in IMG/M
3300025914|Ga0207671_10523362All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium946Open in IMG/M
3300025930|Ga0207701_10502775All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1037Open in IMG/M
3300025942|Ga0207689_10098450All Organisms → cellular organisms → Bacteria2403Open in IMG/M
3300025960|Ga0207651_10986099All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium753Open in IMG/M
3300026095|Ga0207676_11440976All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium685Open in IMG/M
3300026118|Ga0207675_100386226All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1377Open in IMG/M
3300028380|Ga0268265_11670304All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium642Open in IMG/M
3300031716|Ga0310813_11165243All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium709Open in IMG/M
3300031824|Ga0307413_10059724All Organisms → cellular organisms → Bacteria → Acidobacteria2344Open in IMG/M
3300031824|Ga0307413_11251508All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium647Open in IMG/M
3300031901|Ga0307406_11279511All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium639Open in IMG/M
3300032005|Ga0307411_11383641All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium643Open in IMG/M
3300033412|Ga0310810_10384214All Organisms → cellular organisms → Bacteria1458Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere10.89%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere7.92%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil6.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil6.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere6.93%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere6.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere5.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.96%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.97%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.97%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.98%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.98%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.98%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial0.99%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.99%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.99%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.99%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.99%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.99%
Quercus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000531Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNB_Illumina_AssembledHost-AssociatedOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013760Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep2EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
CNBas_100110933300000531Quercus RhizosphereMKTTVKIFILILLLVTATPAGVVNAAEDDFKSVVKMIEQFYRVKHVGLPFLAKAGMKVATTAARIKGGEARRIAEAGSIKLAVF
F14TC_10166993423300000559SoilMRTYIAIILIVVAPTFVHAKNDDFNAVVKMIEQFYGVKHMGIPFLAKAGMKVATTAARIKGGQARRIAEAGSIKLAVFEDQEFNGDFMKFRTSLNGALNTTWM
JGI10216J12902_10367870443300000956SoilMNKIRITALSLTLLLVTGVAQAAGDDFNSVVKLIEQFYGVKHQGIPFLAKAGMKVATTAAKIKGGTAKRIAEAGSIKLAIFEDQAFDREFTQFRTSLNSALISTWTPLIQTLSATDEEQV
JGI10216J12902_12692100923300000956SoilMKKVPLKISIAVVLAIFVAATVSAKDDDFKSVVKMIENFYGVKHQGIPFLAKAGMKVATTAARIKGGEAKRIAEAGSVKVAVFENQEFAGDFTKFRASLN
soilH2_1022740143300003324Sugarcane Root And Bulk SoilMKTLLTIAPKIFIAVALVAFSIPVQAKDDDFKSVVKMIEQFYGVKHQGIPFLARAGMKVATTAARVKGGEAKRIAEAGSIKLAIFEDQDFDGDFIKFRSSLNGALNLTWTPLIQTLSTKDAEQTYIFLR
Ga0062593_10049305413300004114SoilMKAIIAKLFIAIAFLVFSIPVHAGDDDFKSVVKMIEQFYRVKHQGIPFLAKAGMKVATTAAKIKGGEAKRIAEAGSIKLAVFEDQAFNGDFMKF
Ga0062589_10059764833300004156SoilMKRLLTKIFIAVALVAFSIPAQAKDDDFKSVVKMIEQFYGVKHEGIPFLARAGMKVATTAARIKGGEAKRIAEAGSI
Ga0062595_10029883233300004479SoilMKTTRCKTFIAIVLFTFASTTVRAKDDDFKSVVKMIEDFYGVKHQGIPFLAKTGMKVATTAARIKGGQARRFAEAGSIKLAVFDDQDFDGDFTKFRTSLNGALNATWIPLIQTL
Ga0062595_10190113213300004479SoilMNKKLLIVIALLLLSTSVHASGDDFNSVVKMIEKFYSVKHQSIPFLAKTGMKVATTAAKIKGGQARRIAEAGSIKLAVFEDQAFNGDFTKFRASLNEALNDTWMPLIQTLSGK
Ga0062592_10068810213300004480SoilMNTKLLIVVALLLTCAPVHASGDDFNSVVKMIETFYRVKHEGIPFLAKAGMKVATTAARIKGGEAKRIAEAGSIKLAVFENQAFAGDF
Ga0062591_10064732223300004643SoilMNKKLLIVIALLLLSTSVHASGDDFNSVVKMIEKFYSVKHQSIPFLAKTGMKVATTAAKIKGGQARRIAEAGSIKLAVFEDQAFNGDFTRFRAS
Ga0062591_10290323623300004643SoilMKNINAKFLIAIALLLVCAPVHASGDDFNSVVKMIEKFYSVKHQSIPFLAKAGMKVATTAARIKGGEAKRIAEAGSIKLAVFENQAFAGDFTR
Ga0065707_1042973423300005295Switchgrass RhizosphereMKKVPIKTYLALIVVVLATVNAVHAANDDFKSVVKMIEQFYGVKHEGIPFIARAGMKVATTAARIKGGEARRIAEAGSIKVAVFEDQDFNGDFTKFRTSLNAALSLTWMPLIQTLSAQDQEQVYIFLKEAGDKF
Ga0068869_10008585953300005334Miscanthus RhizosphereMKTFIAIILLVVAPTFVHAKNDDFNAVVKMIEQFYGVKHVGIPFLAKAGMKVATTAARIKGGQARRIAEAGSIKLAVFEDQEFNGDFMKFRTSLNGALNTTWMPV
Ga0068869_10083207523300005334Miscanthus RhizosphereMNTKLLVVVALLLICAPVHASGDDFSSVVKMIETFYRVKHEGIPFLAKAGMKVATTAARIKGGEAKRIAEAGSIKLAVFENQAFAGDFTKFRASLNGALNDTWMPL
Ga0068869_10138252513300005334Miscanthus RhizosphereMKTTRCKTFIAIVLFTFASTTVRAKDDDFKSVVKMIEDFYGVKHQGIPFLAKTGMKVATTAARIKGGQARRFAEAGSIKLAVFDD
Ga0068868_10050654513300005338Miscanthus RhizosphereMNKKLLIVIALLLLSTSVHASGDDFNSVVKMIEKFYSVKHQSIPFLAKTGMKVATTAAKIKGGQARRIAEAGSIKLAVFEDQAFNGDFTKFRASLNEALNDTW
Ga0070689_10008799153300005340Switchgrass RhizosphereMKTLLTKIFIAVVLVAFSIPAQAKDDDFKSVVKMIEQFYGVKHEGIPFLARAGMKVATTAARIKGGEAKRIAEAGSIKLAVFEDQDFDGAFIKFRTSLNGALNLTWTPLIQTLS
Ga0070692_1034004123300005345Corn, Switchgrass And Miscanthus RhizosphereMKIKILIATLLFTFASIAVHAKDDDFKSVVKMIEQFYRVKHQGIPFLAKAGMKVATTAAKVKGGQARRIAEAGSVKLAVFEDQAFNGDFTKFRASLNGALNDTWMPLIQTLSGKSEQNYIYLKNA
Ga0070692_1071081113300005345Corn, Switchgrass And Miscanthus RhizosphereMKISRFKIFIATLLFTWATFGSSGAVHAKGDDFKSVVKMIEEFYGVKHQGIPFLAKAGMKVATTAARIKGGQARRIAEAGSIRLAVFE
Ga0070692_1076828713300005345Corn, Switchgrass And Miscanthus RhizosphereMKTVPIKTYLALIVVVLAAVNAVHAANDDFKSVVKMIEQFYGVKHEGIPFIARAGMKVATTAARIKGGEARRIAEAGSIKVAVFEDQDFNGDFTKFRTSLNAALSLTWMPLIQTLSAQDQEQVYIF
Ga0070669_10017885713300005353Switchgrass RhizosphereMKTFIAIILLVVAPTFVHAKNDDFNAVVKMIEQFYGVKHVGIPFLAKAGMKVATTAARIKGGQARRIAEAGSIKLAVFEDQEFNGDFMKFRTSLNGALTTTWMPV
Ga0070675_10092842713300005354Miscanthus RhizosphereMKNIHTKFFIAIALLLICAPVHASGDDFNSVVKMIEKFYSVKHQSIPFLAKAGMKVATTAARIKGGEAKRIAEAGSIKLAVFENQAFAGDFTRFRASLNGTLNDTWMPLIQTLSAKN
Ga0070703_1039710313300005406Corn, Switchgrass And Miscanthus RhizosphereMKTVPIKTYLALIVVVLAAVNAVHAANDDFKSVVKMIEQFYGVKHEGIPFLARAGMKVATTAARIKGGEARQIAEAGSIKLAVFEDQDFNGDFMKFRSSLNS
Ga0070701_1015454413300005438Corn, Switchgrass And Miscanthus RhizosphereMKTLLTTTFIAIALVAFSAPVQAKDDDFNSVVKMIEQFYEVKHQGIPFLAKAGMKVATTAARIKGGQAKRIAEAGSIKLAVFEDQAFNGDFMKFRASLNGALNDTWMPLIQT
Ga0070705_10065246323300005440Corn, Switchgrass And Miscanthus RhizosphereMKKVPIKTYFALIVVVLATVNAVHAANDDFKSVVKMIEQFYGVKHEGIPFIARAGMKVATTAARIKGGEARRIAEAGSIKVAVFEDQDFNGDFTKFRTSLNAALSLTWMPLIQTLS
Ga0070696_10163416913300005546Corn, Switchgrass And Miscanthus RhizosphereMKTISAIVIALLVLSIPVYAVDDDFKSVVKMIEQFYRVKHQGIPFLAKAGMKAATTAAKIKGGEAKRIAEAGSVKLAVFEDQAFNGDFTQFRASLN
Ga0070693_10017431413300005547Corn, Switchgrass And Miscanthus RhizosphereMNTKLLIVIALLLLSTPVNASGDDFNSVVKMIEKFYSVKHEGIPFLAKAGMKVATTAAKVKGGQARRIAEAGSIKLAVFEDQAFNGDFTKFRASLNGALNDTWMPLIQT
Ga0070664_10149409913300005564Corn RhizosphereMKTVLTKIFIAVVLVAFSTPVQAKDDDFNSVVKMIEQFYKVKHEGIPFLAKAGMKVATTAARIKGGEAKRIAEAGSIKLAVFEDQNFEGDFLKFRGSLNG
Ga0070664_10168474923300005564Corn RhizosphereMNKKLLIVIALLLLCAPVHASGDDFNSVVKMIEKFYSVKHQSIPFLAKAGMKVATTAARIKGGEARRIAEAGSVKLAVFENQAFEGDFTRFRASLNGELNDTWMPLIQTLSAKN
Ga0068859_10080008223300005617Switchgrass RhizosphereMNKKLLIVVALLLTCAPIHASGDDFNSVVRMIETFYRVKHEGVPFLAKAGMKVATTAARIKGGEAKRIAEAGSIKLAVFENQAFAGDFTKFRASLNGALNDTWMPLIQTLSAKNAEQNYIYLRNAG
Ga0068861_10042391413300005719Switchgrass RhizosphereMKTLLTTTFIAVALVAFSAPVQAKDDDFNSVVKMIEQFYEVKHQGIPFLAKAGMKVATTAARIKGGQAKRIAEAGSIKLAVFEDQSFDGDFVKFRGSLNGALSLTWTPLIQTLSATDAEQTYIFLRSV
Ga0068863_10000556113300005841Switchgrass RhizosphereMKTLLTTTFIAIVLVAFSAPVQAKDDDFNSVVKMIEQFYKVKHQGIPFLATAGMKVATTAARIKGGQAKRIAEAGSIKLAVFEDQA
Ga0068858_10005804913300005842Switchgrass RhizosphereMKKVPIKTYLALIVVVLATVNAVHAANDDFKSVVKMIEQFYGVKHEGIPFIARAGMKVATTAARIKGGEARRIAEAGSIKVAVFEDQDFNGDFTKFRTSLNAALSLTW
Ga0075422_1013042023300006196Populus RhizosphereMKIKILIATLLFMFASIAVHAKDDDFKSVVKMIEQFYGVKHQGIPFLAKAGMKVATTAARIKGGEARRIAEAGSIKLAVFENQDFDGDFTKFRTSLNGALTAT
Ga0079221_1166171713300006804Agricultural SoilMKTISAIVLALLVFSMPVHPVDDDFKSVVKMIEQFYRVKHQGLPFLARAGMKVGTTAAKIKGGEAKRIAEAGSVKLAVFEDQAFNGDFTKFRASLNGALNDTWMPLIQTLSAKSADQNYIYLRT
Ga0075428_10049667633300006844Populus RhizosphereMKIKILIATLLFMFASIAVHAKDDDFKSVVKMIEQFYGVKHQGIPFLAKAGMKVATTAARIKGGEARRIAEAGSIKLAVFENQDFDGDFTKFRTSLNGALTATWMPLIQT
Ga0075428_10106950613300006844Populus RhizosphereMKTLIAIILLVFASTAVPAKDDDFKTVVKMIEQFYSVKHVGIPFLAKAGMKVATTAARIKGGEAKRIAEAGSIKLAVFENQEFNGDFIKF
Ga0075421_10065958123300006845Populus RhizosphereMKTLIAIILLVFASTAVPAKDDDFKTVVKMIEQFYSVKHVGIPFLAKAGMKVATTAARIKGGEAKRIAEAGSIKLAVFENQEFNGDFIKFRTSLNGALNTTWMPLIQTLSATNGEQTYIYLRD
Ga0075431_10142808823300006847Populus RhizosphereMKTKVFFAILLITGLISATVTNAKGDDFNSVVKMIEQFYHVKHQGIPFLANAGMKAATTVARIKGGTAKRLAESGSIKLAVFEDGDFKSREGPTSFRNSLN
Ga0079217_1127064113300006876Agricultural SoilMKTLLTIAPKIFIAVALVAFSTPVQAKDDDFKSVVKMIEQFYRVKHQGIPFLAKAGMKVATTAARIKGGEAKRIAEAGSIKLAVFENQEFDGD
Ga0075424_10058731513300006904Populus RhizosphereMRIRPSKIFIALIVLLFVAISVPIAVHAKGDDFNSVVKMIEQFYGVKHEGIPLLAKAGMKVATTAARIKGGDARRLAEAGSIKLAVFENQNFNGDFTKFRTSLNEALNTTWIPLIQTL
Ga0075419_1048315223300006969Populus RhizosphereMKTLIAIILLVFASTAVPAKDDDFKTVVKMIEQFYSVKHVGIPFLAKAGMKVATTAARIKGGEAKRIAEAGSIKLAVFENQEFNGDFIKFRTSLNGALNTTWMPLIQTLSAT
Ga0105250_1057052323300009092Switchgrass RhizosphereMKTVLTKIFIAVVLVAFSMPVQAKDDDFNSVVKMIEQFYKVKHEGIPFLAKAGMKVATTAARIKGGEAKRIAEAGSIKLAVFEDQAFNGDFTKFRSSLNEALNVTWMPLVQTLAPKDAEQVYVFLKDAGDKFD
Ga0111539_1080300413300009094Populus RhizosphereMKNINTKLLIAIALLLLCTPVHASGDDFNSVVKMIEKFYGVKHQGIPFLAKAGMKVATTAARIKGGEARRIAEAGSVKLAVFENQAFGGDFTKFRASLNGALNATWMP
Ga0075418_1178934413300009100Populus RhizosphereMKTFIAIIILVFASTVVRAKDDDFKTVVKMIEQFYSVKHVGIPFLAKAGMKVATTAARIKGGEAKRIAEAGSIKLAVFENQEFNGDFIKFRTSLNGALNTTWMPLI
Ga0105247_1078424213300009101Switchgrass RhizosphereMKTLLTTTFIAIVLVAFSAPVQAKDDDFNSVVKMIEQFYKVKHQGIPFLATAGMKVATTAARIKGGQAKRIAEAGSIKLAVFEDQALDGDFVKFRGSLDGAL
Ga0114129_1018733113300009147Populus RhizosphereMKIKILIATLLFMFASIAVHAKDDDFKSVVKMIEQFYGVKHQGIPFLAKAGMKVATTAARIKGGEARRIAEAGSIKLAVFENQDFDGDFTKFRTSLNGALTATWMPLIQTLSAT
Ga0105243_1162175423300009148Miscanthus RhizosphereMKTLLTTTFIAVALVAFSAPVQAKDDDFNSVVKMIEQFYKVKHQGIPFLAKAGMKVATTAARIKGGQAKRIAEAGSIKLAVFEDQSFDGDF
Ga0075423_1297034013300009162Populus RhizosphereMNTKLLIVIALLLLSTPVHASGDDFNSVVKMIEQFYRVKHQSIPFLAKAGMKAATTAAKIKGGQAKRIAEAGSIKLAVFEDQAFNGDFTKFRASLNEELNDTWMPLIQTLSAKSVEQNYIYLKNA
Ga0105248_1204838313300009177Switchgrass RhizosphereMKTISAIVLALLVFSMPVHAAGDDFSSVVKMIEQFYRVKHEGIPFLAKAGMKVATTAAKIKGGEAKRIAEAGSIKVAVFEDQAFNGDFTKFRASLNETLNDTWMP
Ga0105248_1316500313300009177Switchgrass RhizosphereMKSTNAKFLIAIALLLLCSPAEAAGDDFNSVVKMIEQFYRVKHEGVPFLAKAGMKVATTAARIKGGEAKRIAEAGSIKLAVFEDQTFNGDFT
Ga0105249_1281690323300009553Switchgrass RhizosphereMKTLLTTTFIAIALVAFSAPVQAKDDDFNSVVKMIEQFYEVKHQGIPFLAKAGMKVATTAARIKGGQAKRIAEAGSIKLAVFEDQSFDGDFVKFRASLNGALSLTWTPLIQTLSATDAEQTYIFLRSAGDK
Ga0126307_1065564923300009789Serpentine SoilMKTVPFKTCVAIVLLMFTSTAVHAKDDDFKSVVKMIEQFYRVKHQGIPFLAKAGMKAATTAARIKGGEAKRIAEAGSIKLAVFEDQAFDGDFTKFRSSLNDALNATWMPLIQTLSAKSEE
Ga0126315_1119309713300010038Serpentine SoilMKTIATKIFIAIVLVVFSIPAYAKDDDFNSVVKMIEQFYRVKHQGIPFLAKAGMKVATTAARIKGGEAKRIAEAGSVKLAVFEDQDFDGDITRFRASLNGALSETWIPVIQTLSAKNE
Ga0126309_1111344813300010039Serpentine SoilMRISMKKIFCAIVMMAVASTTVVHAKGDDFNSIVKMIEQFYRVKHQGIPFLAKAGMKAATTAARIKGGEAKRIAEAGSIRLAVFEDQDFDGDFMKFRASLNGALSETWMPLIQTLSARNQEQTYIFLRS
Ga0126312_1101511613300010041Serpentine SoilMKTLLTKIFIAISLVVFSTPVQAGDDDFKSVVKMIEQFYGVKHLGIPFLAKAGMKVGTTAARIKGGQAKRLAEAGSIKLAVFEDQDFNGDFVKFRSSLNGALSLTWI
Ga0126314_1111741723300010042Serpentine SoilMKKIFCAIVLVALASTSVVHAKDDDFSSVVKMIEQFYRVKHQGIPFLARTGMKVATTAARIKGGQAKRIAEAGSIKLAVF
Ga0126310_1041837423300010044Serpentine SoilMRISMKKIFCAIVMMAVAWTTVVHAKDDDFNSVVKMIEQFYRVKHQGVPFLAKAGMKVATTAARIKGGQAKQIAEAGSIKLAVFEEQDFDGDFMKFRASLTVH*
Ga0126311_1059672523300010045Serpentine SoilMRISMKKIFCAIVMMAVASTTVVHAKDDDFNSVVKMIEQFYRVKHQGVPFLAKAGMKVATTAARIKGGQAKQIAEAGSIKLAVFEDQDFDGDFIKFRASVNSALSETWMPLIQTLSARDQEQ
Ga0134128_1230551023300010373Terrestrial SoilMKTSPCKILIASTLLVFASTVVQAKGDDFNSVVKMIEQFYSVKHEGIPFLAKTAMKVGTTAARIKGGQAKRIAEAGSIKLAVFEDQEF
Ga0105239_1254297613300010375Corn RhizosphereMKIKIFIATLLFTFASSVVHAKGDDFKSVVKMIEQFYGVKHQGIPFLAKAGMKVATTAARIKGGEARRIAEAGSIKLAVFENQDFDGDLTKFR
Ga0134121_1171140223300010401Terrestrial SoilMKTVPIKTYLALIVVVLAAVNAVHAANDDFKSVVEMIEQFYGVKHEGIPFLARAGMKVATTAARIKGGEARQIAEAGSIKLAVFEDQDFNGDFMKFRSSLNSALSGTWIPLI
Ga0134121_1218354623300010401Terrestrial SoilMNKKLLIVIALLLLSTPVNASGDDFNSVVKMIEKFYSVKHEGIPFLAKAGMKVATTAAKVKGGQARRIAEAGSIKLAVFEDQAFNGDFTKFRASLNGALNDTWMPLIQTLSGKSEQNYIYLKNAGEK
Ga0134123_1145781523300010403Terrestrial SoilMKKIFCAIVLFAFASAGVVHAKNDDFNSVVKMIEQFYRVKHQGIPFLAKAGMKVATTAARIKGGEAKRIAEAGSVKLAVFEDQAFAGDFTKFRASLNDA
Ga0105246_1130455323300011119Miscanthus RhizosphereMNKKLLIVIALLLLSTSVHASGDDFNSVVKMIEKFYSVKHQGIPFLAKTGMKVATTAAKIKGGQARRIAEAGSIKLAVFEDQAFNGDFTKFRASLN
Ga0163162_1293518313300013306Switchgrass RhizosphereMKTLLTTTFIAVALVAFSAPVQAKDDDFNSVVKMIEQFYEVKHQGIPFLAKAGMKVATTAARIKGGQAKRIAEAGSIKLAVFEDQSFDGDFVKFRASLNGALSLTWTPLIQTLSATDAEQTYIFLRSAGDKFNVLV
Ga0120188_101054713300013760TerrestrialMKTSPFKTFIAIALLTFASSIAVQAKDDDFKSVVKMIEKFYGAKYHGIPFLAKAGMKVATTAARIKGGQARRIAEAGSMKLAVFENQDFNGDFTKFRTSLNGALNTTWMPLLQTLSATNGEQNYIFLNDDGKKFNVLVITI
Ga0163163_1074194133300014325Switchgrass RhizosphereMKTNIRKIFVALVLAVLTVNAVHAAGDDFKSVVKMIEQFYGVKHEGLPFLAKAGMKVASTAARIKGGQARRFAEAGSIKLAVFENQEFAGEVTRFRASLNGALTTTWMP
Ga0157380_1228726013300014326Switchgrass RhizosphereMKTLLTKIFIAVALVTFSIPAQAKDDDFKSVVKMIEQFYGVKHEGIPFLARAGMKVATTAARIKGGEAKRIAEAGSIKLAVFEDQDFDGDFIKFRPSLNGALNPTRTPLIQTLSTNDAEQTYIF
Ga0182000_1049587013300014487SoilMKKLLTKIFIAIALVMFSTPVQAKDDDFKSVVKMIEQFYSVKHVGIPFLAKAGMKVATTAARIKGGQAKRIAEAGSIKL
Ga0157377_1009736613300014745Miscanthus RhizosphereMKTIFIAIMLVATFTSATVARAKGDDFNSVVKMIEQFYRVKHTGIPFLAKAGMKVATTAARIKGGEAKRLAEAGSIKLAV
Ga0190275_1037925933300018432SoilMKASPFKIVIAILLATFMSTAAHAKDEDFGSVVRMIEKFYRVKHEGIPFLAKAGMKVATTAARIKGGEAKRIAEAGSVKLAVFENQEFGGDFTKFRASLNNALNTI
Ga0182009_1011094933300021445SoilMKTISAIALALLVFSIPVHAGDDDFKSVVKMIEQFYRVKHQGLPFLAKTGMKVATTAAKIKGGEAKRIAEAGSVKVAVFEDQAFNGDFTKFRASLNEALNDTWMPLIQTLAKSAEQNYIY
Ga0182009_1041898723300021445SoilMKSTNAKFLIAIALLLLCTPVHAAGDDFNSVVKMIEQFYRVKHEGVPFLAKAGMKVATTAARIKGGEAKRIAEAGSIKLAVFEDQAFNGDFTKFRASLNGALNDTWMPLIQT
Ga0207710_1053500513300025900Switchgrass RhizosphereMKNVHTKFFIAIALLLLCTPAHASGDDFNSVVKMIEQFYRVKHQSIPFLAKAGMKVATTAARIKGGEAKRIAEAGSIKLAVFENQAFA
Ga0207643_1014877913300025908Miscanthus RhizosphereMKTLLTTTFIAVALVAFSAPVQAKDDDFNSVVKMIEQFYKVKHQGIPFLATAGMKVATTAARIKGGQAKRIAEAGSIKLAVFEDQGFDGDFVKFRGSLNGALSLTWTPLIQTLSATDEEQTYIFLRSAG
Ga0207654_1128590613300025911Corn RhizosphereMKTLLTTTFIAIALVAFSAPVQAKDDDFNSVVKMIEQFYEVKHQGIPFLAKAGMKVATTAARIKGGQAKRIAEAGSIKLAVFEDQSFDGDFVKFRASLNGALSLTWTPLIQTLSATDAEQTYIFLRSAGDKF
Ga0207707_1029133333300025912Corn RhizosphereMKTISAIALALLVFSIPVHAGDDDFKSVVKMIEQFYRVKHQGLPFLAKTGMKVATTAAKIKGGEAKRIAEAGSVKVAVFEDQAFNGDFTKFRASLNEALNDTWMPLIQTLAKSAEQNYIYLRNAGEIYHVLVIT
Ga0207671_1052336213300025914Corn RhizosphereMKTISAIVLTLLVLSIPVHAGDDDFKSVVKMIEQFYRVKHQGIPFLAKAGMKVGTTAAKIKGGEAKRIAEAGSVKLAVFEDQAFNGDFTKFRASLNGALNDTWIPLIQTLSGKGG
Ga0207701_1050277523300025930Corn, Switchgrass And Miscanthus RhizosphereMKTLLTTTFIAIALVAFSAPVQAKDDDFNSVVKMIEQFYEVKHQGIPFLAKAGMKVATTAARIKGGQAKRIAEAGSIKLAVFEDQSFDGDFVKFRTSLNGALSLTWTPLIQT
Ga0207670_1171695513300025936Switchgrass RhizosphereMKTTRCKTFIAIVLFTFASTTVRAKDDDFKSVVKMIEDFYGVKHQGIPFLAKTGMKVATTAARIKGGQARRFAEAGSIKLAVFDDQD
Ga0207691_1042980233300025940Miscanthus RhizosphereMKTLLTTTFIAIVLVAISAPVQANDDDFNSVVKMIEQFYEVKHQGIPFLAKAGMKVATTAARIKGGQAKRIAEAGSIKLAVFEDQALD
Ga0207689_1009845013300025942Miscanthus RhizosphereMKTFIAIILLVVAPTFVHAKNDDFNAVVKMIEQFYGVKHVGIPFLAKAGMKVATTAARIKGGQARLIAEAGSIKLAVFEDQEFNGDFMKFRTSLNGALNTTWMPVIQTISSGDG
Ga0207651_1098609913300025960Switchgrass RhizosphereMNTKLLIVVALLLTCAPVHASGDDFNSVVKMIETFYRVKHEGVPFLAKAGMKVATTAARIKGGEAKRIAEAGSIKLAVFENQAFAGDFTKFRASLNGALNDTWMPLIQTLSAKNAEQNYIYLRNAGDKYNVLVINIEERD
Ga0207648_1054971633300026089Miscanthus RhizosphereMKTLLTKIFIAVVLVAFSIPAQAKDDDFKSVVKMIEQFYGVKHEGIPFLARAGMKVATTAARIKGGEAKRIAEAGSIKLAV
Ga0207676_1144097623300026095Switchgrass RhizosphereMKTVPIKTYLALIVVVLAAVNAVHAANDDFKSVVKMIEQFYGVKHEGIPFIARAGMKVATTAARIKGGEARRIAEAGSIKVAVFEDQDFNGDFTKFRTSLNAALSLTWMPLIQTLSAQDQ
Ga0207675_10038622613300026118Switchgrass RhizosphereMKTLLTTTFIAVALVAFSAPVQAKDDDFNSVVKMIEQFYEVKHQGIPFLAKAGMKVATTAARIKGGEAKRIAEAGSIKLAVFEDQNFEGDFLKFRGSLNGALNLTW
Ga0209177_1021277313300027775Agricultural SoilMKTISAIVLALLVFSIPVHAGDDDFKSVVKMIEQFYRVKHQGIPFLAKAGMKAATTAAKVKGGEAKRIAEAGSIKLAVFEDQ
Ga0268265_1167030423300028380Switchgrass RhizosphereMKTLLTTTFIAIALVAFSAPVQAKDDDFNSVVKMIEQFYEVKHQGIPFLAKAGMKVATTAARIKGGQAKRIAEAGSIKLAVFEDQSFDGDFVKFRASLNGALSLTWTPLIQTLSATDAEQTYIFLRSAG
Ga0268265_1204746423300028380Switchgrass RhizosphereMKTFLAIILLIFATTTAQAKGDDFKSVVKMIEQFYGVKHIGIPFLAKAGMKVTTTAARIKGGQAKRIAEAGSIKLAVFENQEFDGDFTKFRTS
Ga0310813_1116524313300031716SoilMKSTNVKFLIAIALLLLCTPAEAAGDDFNSVVKMIEQFYRVKHEGVPFLAKAGMKVATTAARIKGGEAKRIAEAGSIKLAVFEDQAFNGDFTKFRASLNDALNDTWMPLIQTLSAKDQEQNYIYLRN
Ga0310813_1118526013300031716SoilMKNINTKYFIVIALLLFSVPVHASGDDFNSVVKMIERFYRVKHQGIPFLAKAGMKVASTAARIKGGEARRIAEAGSIKLAVFEDQAFNGDFTKFRASL
Ga0307413_1005972453300031824RhizosphereMKNINTKLLIAIAVLLACTPVHASGDDFNSVVKIIEKFYRVKHQGIPFLAKAGMKVATTAARIKGGEARRIAEAGSVKLAVFENQAFAGDFTRFRASLNGALNDTWMPLI
Ga0307413_1125150823300031824RhizosphereMKTLLTTIFIAIALVAFSTPVQAKDDDFQSIVKMIEQFYGVKHVGVPFLARAGMKVATTAARIKGGEAKRIAEAGSIKLAMFEDQDFDGDFIKFRASLNTALNLTWSPIIQTLSAKDEEQ
Ga0307410_1065747523300031852RhizosphereMKTLLTTIFIAIALVAFSTPVQAKDDDFHSIVKMIEQFYGVKHVGVPFLARAGMKVATTAARIKGGEAKRIAEAGSIKLAMFEDQDFDGDFIKFR
Ga0307406_1127951123300031901RhizosphereMKKIFCAIVLLAITSTAVVNAKDDDFKSVVKMIEQFYRVKHQGIPFLARTGMKVATTAARIKGGQAKRIAEAGSIKLAVFEDQDFDGDFTKFRTSLNGALSETWMPLIQTLSAK
Ga0307416_10133891623300032002RhizosphereMKVKIFIATLLFTFASSVVHAKGDDFKSVVKMIEQFYGVKHQGIPFLAKAGMKVATTAARIKGGEARRIAEAGSIKLAVFENQHFDGDL
Ga0307416_10210047313300032002RhizosphereMKTLLTTIFIAIALVAFSTPVQAKDDDFQSIVKMIEQFYGVKHVGVPFLARAGLKVATTAARIKGGEAKRIAEAGSIKLAMFEDQDFDGDFVKFR
Ga0307411_1138364123300032005RhizosphereMKTLLTTIFIAIALVAFSTPVQAKDDDFQSIVKMIEQFYGVKHVGVPFLARAGMKVATTAARIKGGEAKRIAEAGSIKLAMFEDQDFDGDFIKFRASLNTALNLTWSPIIQTLSAKDKEQTY
Ga0310810_1038421413300033412SoilMKTISAIVLALLVFSIPVHAGDDDFQSVVKMIEHFYRVKHQGIPFLARAGMKVGTTAAKIKGGEAKRIAEAGSVKLAVFEDQTFNGDFIKFRTSLNSVLNDTWM

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.