Metagenome / Metatranscriptome Family F103602

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F103602
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	68 residues
Representative Sequence	MDIDIKERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSSDTRER
Number of Associated Samples	78
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	17.82 %
% of genes near scaffold ends (potentially truncated)	21.78 %
% of genes from short scaffolds (< 2000 bps)	79.21 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (64.356 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (29.703 % of family members)
Environment Ontology (ENVO)	Unclassified (29.703 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.455 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.23% β-sheet: 0.00% Coil/Unstructured: 30.77%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF05362	Lon_C	24.75
PF13744	HTH_37	5.94
PF05235	CHAD	2.97
PF05973	Gp49	1.98
PF01842	ACT	1.98
PF00535	Glycos_transf_2	0.99
PF13432	TPR_16	0.99
PF01740	STAS	0.99
PF12706	Lactamase_B_2	0.99
PF00685	Sulfotransfer_1	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	24.75
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	24.75
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	24.75
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	24.75
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	2.97
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	2.97
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	1.98
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	1.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.36 %
Unclassified	root	N/A	35.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.36 %
Unclassified	root	N/A	35.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.36 %
Unclassified	root	N/A	35.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.64 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	33.66 %
Aquificae	phylum	All Organisms → cellular organisms → Bacteria → Aquificae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.64 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	16.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.98 %
Aquificae	class	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.83 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.98 %
Aquificales	order	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Aquificales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.98 %
Aquificaceae	family	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Aquificales → Aquificaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.98 %
Hydrogenivirga	genus	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Aquificales → Aquificaceae → Hydrogenivirga	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.98 %
unclassified Hydrogenivirga	no rank	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Aquificales → Aquificaceae → Hydrogenivirga → unclassified Hydrogenivirga	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.98 %
Hydrogenivirga sp. 128-5-R1-1	species	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Aquificales → Aquificaceae → Hydrogenivirga → unclassified Hydrogenivirga → Hydrogenivirga sp. 128-5-R1-1	0.99 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001137\|JGI12637J13337_1014842	Not Available	674	Open in IMG/M
3300001154\|JGI12636J13339_1014746	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300001593\|JGI12635J15846_10113477	All Organisms → cellular organisms → Bacteria → Acidobacteria	1925	Open in IMG/M
3300001593\|JGI12635J15846_10327211	All Organisms → cellular organisms → Bacteria → Acidobacteria	948	Open in IMG/M
3300001593\|JGI12635J15846_10661337	Not Available	604	Open in IMG/M
3300001661\|JGI12053J15887_10648239	Not Available	502	Open in IMG/M
3300002245\|JGIcombinedJ26739_100067734	All Organisms → cellular organisms → Bacteria	3287	Open in IMG/M
3300002906\|JGI25614J43888_10003871	All Organisms → cellular organisms → Bacteria	4730	Open in IMG/M
3300005167\|Ga0066672_10897401	Not Available	549	Open in IMG/M
3300005176\|Ga0066679_10802519	Not Available	601	Open in IMG/M
3300005178\|Ga0066688_10298397	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300005445\|Ga0070708_100554847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1083	Open in IMG/M
3300005561\|Ga0066699_10411111	Not Available	968	Open in IMG/M
3300005921\|Ga0070766_10650446	Not Available	711	Open in IMG/M
3300006176\|Ga0070765_100790630	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300006893\|Ga0073928_10063596	All Organisms → cellular organisms → Bacteria	3244	Open in IMG/M
3300007255\|Ga0099791_10185651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978	Open in IMG/M
3300007258\|Ga0099793_10056737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1742	Open in IMG/M
3300007258\|Ga0099793_10325551	Not Available	749	Open in IMG/M
3300007258\|Ga0099793_10473901	Not Available	620	Open in IMG/M
3300009038\|Ga0099829_10402937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1131	Open in IMG/M
3300009088\|Ga0099830_10318205	Not Available	1245	Open in IMG/M
3300009088\|Ga0099830_10330145	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Aquificales → Aquificaceae → Hydrogenivirga → unclassified Hydrogenivirga → Hydrogenivirga sp. 128-5-R1-1	1223	Open in IMG/M
3300009090\|Ga0099827_10466253	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300011269\|Ga0137392_10305799	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300011271\|Ga0137393_10853912	Not Available	777	Open in IMG/M
3300012202\|Ga0137363_10084568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2372	Open in IMG/M
3300012202\|Ga0137363_11322247	Not Available	609	Open in IMG/M
3300012205\|Ga0137362_11589326	Not Available	541	Open in IMG/M
3300012362\|Ga0137361_10858925	Not Available	824	Open in IMG/M
3300012362\|Ga0137361_11551097	Not Available	584	Open in IMG/M
3300012362\|Ga0137361_11787133	Not Available	533	Open in IMG/M
3300012363\|Ga0137390_10838912	Not Available	876	Open in IMG/M
3300012363\|Ga0137390_11672858	Not Available	572	Open in IMG/M
3300012918\|Ga0137396_11047677	Not Available	587	Open in IMG/M
3300012918\|Ga0137396_11169693	Not Available	544	Open in IMG/M
3300012922\|Ga0137394_10749013	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300012925\|Ga0137419_10820957	Not Available	762	Open in IMG/M
3300015054\|Ga0137420_1158090	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1196	Open in IMG/M
3300015054\|Ga0137420_1158091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1148	Open in IMG/M
3300015054\|Ga0137420_1247833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1194	Open in IMG/M
3300015193\|Ga0167668_1020767	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300019887\|Ga0193729_1007125	All Organisms → cellular organisms → Bacteria	5219	Open in IMG/M
3300019888\|Ga0193751_1000243	All Organisms → cellular organisms → Bacteria → Acidobacteria	47655	Open in IMG/M
3300019888\|Ga0193751_1002314	All Organisms → cellular organisms → Bacteria	11612	Open in IMG/M
3300020579\|Ga0210407_10000622	All Organisms → cellular organisms → Bacteria → Acidobacteria	38331	Open in IMG/M
3300020579\|Ga0210407_10135591	All Organisms → cellular organisms → Bacteria	1890	Open in IMG/M
3300020579\|Ga0210407_10645045	Not Available	823	Open in IMG/M
3300020581\|Ga0210399_10084850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2576	Open in IMG/M
3300020583\|Ga0210401_10188803	All Organisms → cellular organisms → Bacteria	1918	Open in IMG/M
3300021168\|Ga0210406_10189286	All Organisms → cellular organisms → Bacteria	1711	Open in IMG/M
3300021170\|Ga0210400_10000231	All Organisms → cellular organisms → Bacteria	69046	Open in IMG/M
3300021170\|Ga0210400_10091698	All Organisms → cellular organisms → Bacteria	2398	Open in IMG/M
3300021170\|Ga0210400_11117683	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300021559\|Ga0210409_10320186	All Organisms → cellular organisms → Bacteria → Acidobacteria	1396	Open in IMG/M
3300022557\|Ga0212123_10001117	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	77718	Open in IMG/M
3300026304\|Ga0209240_1002540	All Organisms → cellular organisms → Bacteria → Acidobacteria	6921	Open in IMG/M
3300026309\|Ga0209055_1045092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1928	Open in IMG/M
3300026309\|Ga0209055_1225979	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300026318\|Ga0209471_1227639	Not Available	675	Open in IMG/M
3300026318\|Ga0209471_1241428	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300026355\|Ga0257149_1070517	Not Available	513	Open in IMG/M
3300026469\|Ga0257169_1072587	Not Available	558	Open in IMG/M
3300026482\|Ga0257172_1089913	Not Available	564	Open in IMG/M
3300026496\|Ga0257157_1011287	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1418	Open in IMG/M
3300026514\|Ga0257168_1130538	Not Available	560	Open in IMG/M
3300026551\|Ga0209648_10029189	All Organisms → cellular organisms → Bacteria	4820	Open in IMG/M
3300026557\|Ga0179587_10180741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1328	Open in IMG/M
3300027521\|Ga0209524_1132898	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300027537\|Ga0209419_1019990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1218	Open in IMG/M
3300027562\|Ga0209735_1004442	All Organisms → cellular organisms → Bacteria	2548	Open in IMG/M
3300027565\|Ga0209219_1132679	All Organisms → cellular organisms → Bacteria → Acidobacteria	604	Open in IMG/M
3300027587\|Ga0209220_1141593	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300027591\|Ga0209733_1018201	All Organisms → cellular organisms → Bacteria	1890	Open in IMG/M
3300027629\|Ga0209422_1068185	Not Available	839	Open in IMG/M
3300027635\|Ga0209625_1067348	All Organisms → cellular organisms → Bacteria → Acidobacteria	801	Open in IMG/M
3300027645\|Ga0209117_1015551	All Organisms → cellular organisms → Bacteria	2510	Open in IMG/M
3300027660\|Ga0209736_1003522	All Organisms → cellular organisms → Bacteria	5206	Open in IMG/M
3300027663\|Ga0208990_1031196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1689	Open in IMG/M
3300027671\|Ga0209588_1122274	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300027674\|Ga0209118_1013816	All Organisms → cellular organisms → Bacteria	2683	Open in IMG/M
3300027674\|Ga0209118_1089550	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300027681\|Ga0208991_1018687	All Organisms → cellular organisms → Bacteria	2093	Open in IMG/M
3300027738\|Ga0208989_10010977	All Organisms → cellular organisms → Bacteria	3095	Open in IMG/M
3300027738\|Ga0208989_10086351	All Organisms → cellular organisms → Bacteria → Acidobacteria	1072	Open in IMG/M
3300027748\|Ga0209689_1095802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1542	Open in IMG/M
3300027862\|Ga0209701_10572176	Not Available	604	Open in IMG/M
3300027889\|Ga0209380_10879924	Not Available	504	Open in IMG/M
3300027903\|Ga0209488_10407851	All Organisms → cellular organisms → Bacteria → Acidobacteria	1005	Open in IMG/M
3300028047\|Ga0209526_10824005	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300028536\|Ga0137415_10786374	Not Available	762	Open in IMG/M
3300028906\|Ga0308309_10477684	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300030991\|Ga0073994_10021167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1690	Open in IMG/M
3300031023\|Ga0073998_11094569	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300031057\|Ga0170834_108803095	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300031718\|Ga0307474_10108328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2080	Open in IMG/M
3300031753\|Ga0307477_11048532	Not Available	533	Open in IMG/M
3300031754\|Ga0307475_10627615	Not Available	859	Open in IMG/M
3300031754\|Ga0307475_10687586	Not Available	816	Open in IMG/M
3300031962\|Ga0307479_10995964	Not Available	807	Open in IMG/M
3300031962\|Ga0307479_12027819	Not Available	524	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.02%
Aquatic	Environmental → Aquatic	1.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.02%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.31%
Loam	Environmental → Terrestrial → Soil → Loam	28.71%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	27.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.88%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.99%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	23.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.97%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.98%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031023	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFA (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12637J13337_10148421	3300001137	Forest Soil	MDIDIKDRIAALCAKVIAAPDRSEEFERAMEELNSALSKHAENMRSQIANLRQKGFPHSNDTGD*
JGI12636J13339_10147462	3300001154	Forest Soil	MDIDIKERIAALCAKVIAAPDRSEEFVRAMEELNSALGEHAENLRSQIASLRQKGFPHSSDTGER*
JGI12635J15846_101134773	3300001593	Forest Soil	MDIDIKERIAALCAKVIAAPDRSEEFVCAMQELNSALSEHAENLRSQIASLRQKGFPHSSDSGER*
JGI12635J15846_103272111	3300001593	Forest Soil	RDLFGILPLPPPMDIDIKERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSSDTGER*
JGI12635J15846_106613371	3300001593	Forest Soil	MDIEERIAALCAXVIAAPDGSEELXSAMEELRSALSEHAENLRRQVANLRQKGFSHSDDTGKR*
JGI12053J15887_106482391	3300001661	Forest Soil	MDIDIKDRIAALCAKVIAAPDRSEEFVRAMEELNSALNEHAENLRSQIANLRQKGFPHSKSNDTGER*
JGIcombinedJ26739_1000677341	3300002245	Forest Soil	LFGILPLPPPMDIDIKERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSSDTGER*
JGI25614J43888_100038712	3300002906	Grasslands Soil	MDIDIKDRIAALCAKVIAAPDGSEELTRTMEELRSALSEHAEDLRSQVANLRQNGFSHSDDTR*
Ga0066672_108974011	3300005167	Soil	MGIDIKERIVALCAKVIAAPDGSKELGDAMEELRSALKEHAEDMRRQIANMRQKGLLRTDDTGEVESGSRKP*
Ga0066679_108025192	3300005176	Soil	MGIDIKERIVALCAKVIAAPDGSKELGDAMEELRSALKEHAEDMRRQIANMRQKGLPRTDDTGEVESGSRKP*
Ga0066688_102983972	3300005178	Soil	LVWHPTALSPPMGIDIKERIVALCAKVIAAPDGSKELGDAMEELRSALKEHAEDMRRQIANMRQKGLLRTDDTGEVESGSRKP*
Ga0070708_1005548473	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MEIDIKDRIAALCAKVIAAPDRSEEFVCAMEELNSALNEHAENLRSQIANLRQKGFPHSGDTVE*
Ga0066699_104111111	3300005561	Soil	ALSPPMGIDIKERIVALCAKVIAAPDGSKELGDAMEELRSALKEHAEDMRRQIANMRQKGLPRTDDTGEVESGSRKP*
Ga0070766_106504461	3300005921	Soil	MDIDLNERIAALCARVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSSDTRER*
Ga0070765_1007906301	3300006176	Soil	LFGILPLPPPMDIDLNERIAALCARVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSSDTRER*
Ga0073928_100635962	3300006893	Iron-Sulfur Acid Spring	LFGILPLPPPMDIDIKERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSSDTRER*
Ga0099791_101856511	3300007255	Vadose Zone Soil	MGIDIKERIVALCAKVIAAPDGSKELGDAMEELRSALKEHAEDMRRQIANMRQRGLPRTDDTGGVESGSRKP*
Ga0099793_100567372	3300007258	Vadose Zone Soil	MGIDIKERIVALCAKVIAAPDGSKELGDAMEELRSALKEHAEDMRRQIANMRQKALPRTDDTGEVESGSRKP*
Ga0099793_103255511	3300007258	Vadose Zone Soil	MDIDIKERIAALCAKVIAAPDGSEELRCTMEELRSALSEHAENLRRHVANLRQKGFPHSDDAGER*
Ga0099793_104739011	3300007258	Vadose Zone Soil	MGIDIKERIVALCAKVIAAPDGSKELGDAMEELRSALKEHAEDMRRQIANLRQKGFPRTDDTGEVESGSRKP*
Ga0099829_104029371	3300009038	Vadose Zone Soil	MEIDIKDRIAALCAKVIAAPDRSEEFVCAMEELNSALNEHAENLRSQIASLRQKGFPQSGDTGE*
Ga0099830_103182052	3300009088	Vadose Zone Soil	MDTDIKDRIADLCAKVIAAPDGSEEFGGAMAELRSALNEHAENLRRQIANLRKKGFPQTGDTSEG*
Ga0099830_103301452	3300009088	Vadose Zone Soil	MEIDIKDRIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIANLRQKGFPQSSDTRER*
Ga0099827_104662532	3300009090	Vadose Zone Soil	LFGILPLPPPMEIDIKDRIAALCAKVIAAPDRSEEFVCAMEELNSALNEHAENLRSQIASLRQKGFPHSSDRGER*
Ga0137392_103057992	3300011269	Vadose Zone Soil	MEIDIKDRIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIANLRQKGFPQSGDTGE*
Ga0137393_108539121	3300011271	Vadose Zone Soil	MDIDIKDRIAVLCAKVIAAPDRSEEFVRAMEELNSALNEHAENLRSQIANLRQRGFPHSNDTSER*
Ga0137363_100845683	3300012202	Vadose Zone Soil	MEIDIKDRIADLCAKVIAAPDGSEEFVCAMGELNSALNEHAENLRSQIASLRQKGFPHSGDTGE*
Ga0137363_113222471	3300012202	Vadose Zone Soil	DIKERIVALCAKVIAAPDGSKELGDAMEELRSALKEHAEDMRRQIAIMRQKGLPRTDDTGEVESGSRKP*
Ga0137362_115893261	3300012205	Vadose Zone Soil	MEIDIKDRIAALCAKVIATPDRSEEFVCAMEELNSALNEHAENLRSQIASLRQKGFPHSSDRGER*
Ga0137361_108589252	3300012362	Vadose Zone Soil	VALCAKVIAAPDGSKELGDAMEELRSALKEHAEDMRRQIANMRQKGLLRTDDTGEVESGSRKP*
Ga0137361_115510971	3300012362	Vadose Zone Soil	VALCAKVIAAPDGSKELGDAMEELRSALKEHAEDMRRQIANMRQKSLPRTDDTGEVESGSRKP*
Ga0137361_117871331	3300012362	Vadose Zone Soil	MGIDIKERIVALCAKVIAAPDGSKELGDAMEELRSALKEHAEDMRRQIAIMRQKGLPRTDDTGEVESGSHKP*
Ga0137390_108389121	3300012363	Vadose Zone Soil	MDIDIKDRIAALCAKVIAAPDRSEEFVCAMEELNSALTEHAENLRSQIANLRRKGFPHSADTSER*
Ga0137390_116728581	3300012363	Vadose Zone Soil	MDAKERINALCAKVIAAPDGSEELAIGIQELRSALADHVEILRRQISDLRQKSFSHSDDMGG*
Ga0137396_110476771	3300012918	Vadose Zone Soil	MGIDIKERIVALCAKVIAAPDGSKELGDAMEELRSALKEHAENLRGQIANLRQKGFPRTDDTGEVESGS
Ga0137396_111696931	3300012918	Vadose Zone Soil	MDIDIKERIAALCAKVIAAPDGSEELRCTMEELRSALSEHAENLRRHVANLRQKGFPHS
Ga0137394_107490131	3300012922	Vadose Zone Soil	LCAKVIAAPDGSEELTIAMRELRTALAEHVEHLRRRLADLRQRGLPRSNDAGGGPIKER*
Ga0137419_108209571	3300012925	Vadose Zone Soil	IDIKERIVALCAKVIAAPDGSKELGDAMEELRSALKEHAEEMRRQIANMRQKGLPRTDDTGEVESGSRKP*
Ga0137420_11580901	3300015054	Vadose Zone Soil	SPPMGIDIKERIVALCAKVIAAPDGSKELGDAMEELRSALKEHAEEMRRQIANMRQKGLPRTDDTGEVESGSRKP*
Ga0137420_11580912	3300015054	Vadose Zone Soil	MGIDIKERIVALCAKVIAAPDGSKELGDAMEELRSALKEHAEEMRRQIANMRQKGLPRTDDTGEVESGSRKP*
Ga0137420_12478332	3300015054	Vadose Zone Soil	MGIDIKERIVALCAKVIAAPDGSKELGDAMEELRSALKQHAEDMRRQIANMRQKGLPRTDDTGEVESGSRKP*
Ga0167668_10207672	3300015193	Glacier Forefield Soil	MDIDIKERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRGQIASLRQKGFPHSSDTRER*
Ga0193729_10071254	3300019887	Soil	LFGILPLPSPMDIDIKERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSSDTRER
Ga0193751_100024329	3300019888	Soil	LFGILPLPPPMEIDIKDRIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIANLRQKGFPHSSDRGER
Ga0193751_10023146	3300019888	Soil	MEIDIKDRIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIANLRQKGFPHSSDTRER
Ga0210407_1000062221	3300020579	Soil	MDIDIKDRIAALCARVIAAPDRSEEFVCAMDELNSALTEHAENLRSQIANLRQKGFPQSGDTSER
Ga0210407_101355913	3300020579	Soil	LFGTLPLPPPMDIDIKERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAESLRSQIASLRQKGFPHSSDTRER
Ga0210407_106450453	3300020579	Soil	RIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSSDTRER
Ga0210399_100848503	3300020581	Soil	LFGILPLPPPMDIDIKERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSSDTRER
Ga0210401_101888032	3300020583	Soil	MDIDIKERIAALCAKVIAAPDRSDEFVGAMEELNSALSEHAENLRSQIASLRQKGFPHSSDTREP
Ga0210406_101892863	3300021168	Soil	LFGILPLPPPMDIDLNERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSSDTRER
Ga0210400_1000023144	3300021170	Soil	MDIDIKERIAALCAKVIAAPDGSEELSCTMEELRSALSEHAKNMRRQIVNLRQKGFPHSDDTGER
Ga0210400_100916982	3300021170	Soil	MDIDLNERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSSDTRER
Ga0210400_111176831	3300021170	Soil	PTALPPPMDIDIKDRIAALCAKVIAAPDRSEEFVCATEELNCALSDHAENLRNQIANLRQKGFPHSADTSER
Ga0210409_103201862	3300021559	Soil	MDIDIKERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSADTSER
Ga0212123_1000111778	3300022557	Iron-Sulfur Acid Spring	MDIDIKERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSSDTRER
Ga0209240_10025402	3300026304	Grasslands Soil	MDIDIKDRIAALCAKVIAAPDGSEELTRTMEELRSALSEHAEDLRSQVANLRQNGFSHSDDTR
Ga0209055_10450923	3300026309	Soil	MGIDIKERIVALCAKVIAAPDGSKELGDAMEELRSALKEHAEDMRRQIANMRQKGLLRTDDTGEVESGSRKP
Ga0209055_12259791	3300026309	Soil	LASYCPLSPMGIDIKERIVALCAKVIAAPDGSKELGDAMEELRSALKEHAEEMRRQIANMRQKGLLR
Ga0209471_12276391	3300026318	Soil	IKERIVALCAKVIAAPDGSKELGDAMEELRSALKEHAEDMRRQIANMRQKGLLRTDDTGEVESGSRKP
Ga0209471_12414282	3300026318	Soil	MGIDIKERIVALCAKVIAAPDGSKELGDAMEELRSALKEHAEEMRRQIANMRQKGLLRTHDTGEVESGSRKP
Ga0257149_10705171	3300026355	Soil	MDIDIKDRIAALCAKVIAAPDRSDEFVRAMEELNSALSEHAENLRSQIANLRQKGFPHSNDTSER
Ga0257169_10725871	3300026469	Soil	LFGILPLPPPMDIDIKERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAESLRSQIASLRQKGFPHSSDTRER
Ga0257172_10899131	3300026482	Soil	DIDIKERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAESLRSQIASLRQKGFPHSSDTR
Ga0257157_10112872	3300026496	Soil	MEIDIKDRIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSSDTRER
Ga0257168_11305382	3300026514	Soil	DRIADLCAKVIAAPDGSEEFGGAMAELRSALNEHAENLRRQIANLRKKGFPQTGDTSEG
Ga0209648_100291893	3300026551	Grasslands Soil	LFGILPLPPPMDIDIKERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPRSSDTRER
Ga0179587_101807412	3300026557	Vadose Zone Soil	MEIDIKDRIADLCAKVIAAPDGAEEFVCAMGELNSALNEHAENLRSQIASLRQKGFPHSGDTGE
Ga0209524_11328982	3300027521	Forest Soil	VFQRRDLLGILRLPPLMDIDIKERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSSDTRER
Ga0209419_10199903	3300027537	Forest Soil	MDIDIKDRIAALCAKVIAAPDRSEEFERAMEELNSALSKHAENMRSQIANLRQKGFPHSNDTGD
Ga0209735_10044422	3300027562	Forest Soil	MDIDIKERIAALCAKVIAAPDRSEEFVCAMQELNSALSEHAENLRSQIASLRQKGFPHSSDSGER
Ga0209219_11326792	3300027565	Forest Soil	DLFGILPLPPPMDIDIKERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSSDTRER
Ga0209220_11415932	3300027587	Forest Soil	PPMDIDIKERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSSDTGER
Ga0209733_10182013	3300027591	Forest Soil	MDIDIKERIAALCAKVIAAPDGSEEFACAMEELNSALSEHAENLRSQIASLRQKGFPHSSDSGER
Ga0209422_10681851	3300027629	Forest Soil	MDIDIKERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSSDSGER
Ga0209625_10673481	3300027635	Forest Soil	MDIDIKERIAALCAKVIAAPDRSEEFLCAMEELNSALGEHAENLRSQIANLRQKGFPHSSDTRER
Ga0209117_10155511	3300027645	Forest Soil	MDIEERIAALCAKVIAAPDGSEELGSAMEELRSALSEHAENLRRQVANLRQKGFLHSDDTGKR
Ga0209736_10035222	3300027660	Forest Soil	LLGILPLPPPMDIDIKERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSSDTGER
Ga0208990_10311962	3300027663	Forest Soil	MGIDIKERIVALCAKVIAAPDGSKELGDAMEELRSALKEHAEEMRRQIANMRQKGLPRTDDTGEVESGSRKP
Ga0209588_11222742	3300027671	Vadose Zone Soil	MGIDIKERIVALCAKVIAAPDGSKELGDAMEELRSALKEHAEDMRRQIANMRQRGLPRTDDTGGVESGSRKP
Ga0209118_10138162	3300027674	Forest Soil	MDIDIKERIAALCAKVIAAPDRSEEFVRAMEELNSALGEHAENLRSQIASLRQKGFPHSSDTGER
Ga0209118_10895502	3300027674	Forest Soil	MDIDIKDRIAALCAKVIAAPDRSEEFERAMEELNSALSKHAENLRSQIANLRQKGFPHSNDTGD
Ga0208991_10186871	3300027681	Forest Soil	MDIEERIAALCAKVIAAPDGSEELASAMQELRSALGEHAENMRRQVANLRQKGFPRSDDTDKR
Ga0208989_100109773	3300027738	Forest Soil	MDIEERIAALCAKVIAAPDGSEELASAMEELRLALSEHTENMRRQVANLRQKGFPPSDDTGKR
Ga0208989_100863511	3300027738	Forest Soil	MDIDIKDRIAALCAKVIAAPDRSEEFVRAMEELNSALNEHAENLRSQIANLRQKGFPHSKSNDTGER
Ga0209689_10958021	3300027748	Soil	DGLVWHPTALSPPMGIDIKERIVALCAKVIAAPDGSKELGDAMEELRSALKEHAEDMRRQIANMRQKGLLRTDDTGEVESGSRKP
Ga0209701_105721761	3300027862	Vadose Zone Soil	MDTDIKDRIADLCAKVIAAPDGSEEFGGAMAELRSALNEHAENLRRQIANLRKKGFPQTGDTSEG
Ga0209380_108799241	3300027889	Soil	LFGILPLPPPMDIDLKERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSSDTRER
Ga0209488_104078512	3300027903	Vadose Zone Soil	MGIDIKERIVALCAKVIAAPDGSKELGDAMEELRSALKEHAEDMRRQIANMRQKALPRTDDTGEVESGSRKP
Ga0209526_108240052	3300028047	Forest Soil	QRRDLLGILRLPPLMDIDIKERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSSDTRER
Ga0137415_107863741	3300028536	Vadose Zone Soil	MFGILQPSPPMDIDIKERIAALCAKVIAAPDGSEELRCTMEELRSALSEHAENLRRHVANLRQKGFPHSDDAGER
Ga0308309_104776842	3300028906	Soil	MDIDLNERIAALCARVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSSDTRER
Ga0073994_100211673	3300030991	Soil	MEIDIKDRIAALCAKVIAAPDRSEEFVCAMEELNSALSEHTENLRSQIASLRQKGFPHSSDTGER
Ga0073998_110945691	3300031023	Soil	PMDIDIKERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIASLRQKGFPHSNDTPER
Ga0170834_1088030952	3300031057	Forest Soil	MDIDIKDRIAALCAKVIAAPDRSEEFVCAMEELNSALNEHTENLRSQIASLRRKGFPHSGDTGE
Ga0307474_101083282	3300031718	Hardwood Forest Soil	MDTDIKDRIADLCARVIAAPDGSEEFGGAMAELRSALNEHAENLRRQIASLRKKGFPQSGDTAEG
Ga0307477_110485321	3300031753	Hardwood Forest Soil	MEIDIKDRIAALCAKVIAAPDRSEEFVCAMEELNSALNEHAENLRSQIASLRQKGFPHSGDTVER
Ga0307475_106276152	3300031754	Hardwood Forest Soil	LFGILHPSSPMEIDIKDRIAALCAKVIAAPDRSEEFVCAMEELNSALNEHAENLRSQIASLRQKGFPHSGDIGE
Ga0307475_106875861	3300031754	Hardwood Forest Soil	LFGILPEPPPMDIDIKERIAALCAKVIAAPDRSEEFVCAMEELNSALSEHAENLRSQIANLRQKGFPHSSDTGE
Ga0307479_109959642	3300031962	Hardwood Forest Soil	MDIDIKDRIAALCAKVIAAPDRSEEFVCAMEELNCALSDHAGNLRNQIANLRQKGFPHSADTSER
Ga0307479_120278191	3300031962	Hardwood Forest Soil	MEIDIKDRIAALCAKVIAAPDRSEEFVCAMEELNSALNEHAENLRSQIASLRQKGFPHSGDAGER

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103602

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences