Metagenome / Metatranscriptome Family F103651

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103651
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	78 residues
Representative Sequence	MRWDRLTFTALGGVAAFLVGIALLLGDERPLFAPVFGMVGGIGALAMANHERLKLRVDALEKRLAQREWRERAEARWDG
Number of Associated Samples	75
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	13.86 %
% of genes near scaffold ends (potentially truncated)	35.64 %
% of genes from short scaffolds (< 2000 bps)	87.13 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.317 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (51.485 % of family members)
Environment Ontology (ENVO)	Unclassified (66.337 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (47.525 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.16% β-sheet: 0.00% Coil/Unstructured: 30.84%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00580	UvrD-helicase	7.92
PF03773	ArsP_1	7.92
PF01370	Epimerase	6.93
PF13361	UvrD_C	4.95
PF08401	ArdcN	2.97
PF01135	PCMT	0.99
PF09351	DUF1993	0.99
PF02586	SRAP	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	7.92
COG0701	Uncharacterized membrane protein YraQ, UPF0718 family	Function unknown [S]	7.92
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	7.92
COG3973	DNA helicase IV	Replication, recombination and repair [L]	7.92
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	2.97
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.99
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.99
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.99
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.99
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
All Organisms	root	All Organisms	31.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
cellular organisms	root	All Organisms → cellular organisms	31.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	6.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.95 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.96 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.99 %
Alphaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_38_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_38_11	6.93 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	4.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.96 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.99 %
Micavibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_38_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_38_11	6.93 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	4.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.96 %
Micavibrio aeruginosavorus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio → Micavibrio aeruginosavorus	0.99 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_38_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_38_11	6.93 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	4.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.96 %
Micavibrio aeruginosavorus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio → Micavibrio aeruginosavorus	0.99 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_38_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_38_11	6.93 %
Frankia gtarii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia gtarii	4.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.96 %
Micavibrio aeruginosavorus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio → Micavibrio aeruginosavorus	0.99 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10020224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia gtarii	2712	Open in IMG/M
3300004152\|Ga0062386_100688053	All Organisms → cellular organisms → Bacteria → Proteobacteria	839	Open in IMG/M
3300005178\|Ga0066688_10602553	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300005363\|Ga0008090_14289717	Not Available	837	Open in IMG/M
3300005764\|Ga0066903_100146428	All Organisms → cellular organisms → Bacteria → Proteobacteria	3378	Open in IMG/M
3300006175\|Ga0070712_100871598	Not Available	775	Open in IMG/M
3300010359\|Ga0126376_11110024	Not Available	800	Open in IMG/M
3300010359\|Ga0126376_11202166	Not Available	773	Open in IMG/M
3300010361\|Ga0126378_11087480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	901	Open in IMG/M
3300010376\|Ga0126381_102621810	Not Available	721	Open in IMG/M
3300010376\|Ga0126381_102638912	Not Available	719	Open in IMG/M
3300010376\|Ga0126381_103158875	Not Available	652	Open in IMG/M
3300012202\|Ga0137363_11217853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	640	Open in IMG/M
3300012362\|Ga0137361_10721253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	910	Open in IMG/M
3300012922\|Ga0137394_10517814	Not Available	1012	Open in IMG/M
3300016270\|Ga0182036_11636027	Not Available	543	Open in IMG/M
3300016294\|Ga0182041_10657297	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300016294\|Ga0182041_11964134	Not Available	544	Open in IMG/M
3300016371\|Ga0182034_10837012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_38_11	789	Open in IMG/M
3300016371\|Ga0182034_11730056	Not Available	550	Open in IMG/M
3300016387\|Ga0182040_10020923	Not Available	3629	Open in IMG/M
3300016387\|Ga0182040_11596102	Not Available	555	Open in IMG/M
3300016404\|Ga0182037_11601196	Not Available	579	Open in IMG/M
3300016404\|Ga0182037_12097126	Not Available	508	Open in IMG/M
3300016422\|Ga0182039_10602615	Not Available	960	Open in IMG/M
3300016422\|Ga0182039_10723446	Not Available	879	Open in IMG/M
3300016422\|Ga0182039_11950192	Not Available	540	Open in IMG/M
3300017943\|Ga0187819_10384902	Not Available	807	Open in IMG/M
3300020579\|Ga0210407_10702739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio → Micavibrio aeruginosavorus	784	Open in IMG/M
3300020580\|Ga0210403_10350451	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300020580\|Ga0210403_10631617	Not Available	863	Open in IMG/M
3300020581\|Ga0210399_11022021	Not Available	665	Open in IMG/M
3300021168\|Ga0210406_10417315	Not Available	1073	Open in IMG/M
3300021178\|Ga0210408_10299706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_38_11	1282	Open in IMG/M
3300021405\|Ga0210387_11294101	Not Available	630	Open in IMG/M
3300021476\|Ga0187846_10000774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18181	Open in IMG/M
3300021476\|Ga0187846_10005148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6675	Open in IMG/M
3300021476\|Ga0187846_10096647	Not Available	1274	Open in IMG/M
3300021560\|Ga0126371_10026735	All Organisms → cellular organisms → Bacteria → Proteobacteria	5369	Open in IMG/M
3300027071\|Ga0209214_1010984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia gtarii	1092	Open in IMG/M
3300027371\|Ga0209418_1014272	Not Available	1282	Open in IMG/M
3300029636\|Ga0222749_10285677	Not Available	849	Open in IMG/M
3300031231\|Ga0170824_115167018	Not Available	555	Open in IMG/M
3300031543\|Ga0318516_10405547	Not Available	785	Open in IMG/M
3300031543\|Ga0318516_10425983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_38_11	764	Open in IMG/M
3300031545\|Ga0318541_10040428	Not Available	2357	Open in IMG/M
3300031545\|Ga0318541_10048211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_38_11	2177	Open in IMG/M
3300031545\|Ga0318541_10455408	Not Available	715	Open in IMG/M
3300031561\|Ga0318528_10383954	Not Available	754	Open in IMG/M
3300031561\|Ga0318528_10661319	Not Available	560	Open in IMG/M
3300031573\|Ga0310915_11260320	Not Available	510	Open in IMG/M
3300031640\|Ga0318555_10616770	Not Available	587	Open in IMG/M
3300031668\|Ga0318542_10145134	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300031668\|Ga0318542_10194387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_38_11	1022	Open in IMG/M
3300031668\|Ga0318542_10734971	Not Available	516	Open in IMG/M
3300031680\|Ga0318574_10737291	Not Available	577	Open in IMG/M
3300031681\|Ga0318572_10283936	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300031744\|Ga0306918_10174120	Not Available	1606	Open in IMG/M
3300031748\|Ga0318492_10020234	Not Available	2883	Open in IMG/M
3300031768\|Ga0318509_10103261	Not Available	1539	Open in IMG/M
3300031768\|Ga0318509_10730017	Not Available	549	Open in IMG/M
3300031777\|Ga0318543_10239402	Not Available	809	Open in IMG/M
3300031778\|Ga0318498_10536660	Not Available	514	Open in IMG/M
3300031780\|Ga0318508_1062453	Not Available	999	Open in IMG/M
3300031781\|Ga0318547_11048732	Not Available	510	Open in IMG/M
3300031793\|Ga0318548_10066300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia gtarii	1682	Open in IMG/M
3300031794\|Ga0318503_10061678	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300031799\|Ga0318565_10545044	Not Available	559	Open in IMG/M
3300031823\|Ga0307478_10137644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia gtarii	1929	Open in IMG/M
3300031846\|Ga0318512_10039482	Not Available	2065	Open in IMG/M
3300031859\|Ga0318527_10422272	Not Available	568	Open in IMG/M
3300031879\|Ga0306919_11147964	Not Available	591	Open in IMG/M
3300031880\|Ga0318544_10033165	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300031893\|Ga0318536_10029832	Not Available	2546	Open in IMG/M
3300031893\|Ga0318536_10690555	Not Available	508	Open in IMG/M
3300031894\|Ga0318522_10417667	Not Available	508	Open in IMG/M
3300031897\|Ga0318520_10165790	Not Available	1289	Open in IMG/M
3300031897\|Ga0318520_10363070	Not Available	880	Open in IMG/M
3300031910\|Ga0306923_10722216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1107	Open in IMG/M
3300031912\|Ga0306921_10395312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_38_11	1614	Open in IMG/M
3300031912\|Ga0306921_11378014	Not Available	776	Open in IMG/M
3300031942\|Ga0310916_10031111	Not Available	3919	Open in IMG/M
3300031946\|Ga0310910_11197107	Not Available	589	Open in IMG/M
3300031954\|Ga0306926_11487580	Not Available	782	Open in IMG/M
3300031954\|Ga0306926_12496263	Not Available	567	Open in IMG/M
3300032009\|Ga0318563_10291541	Not Available	882	Open in IMG/M
3300032025\|Ga0318507_10083048	Not Available	1316	Open in IMG/M
3300032044\|Ga0318558_10202396	Not Available	969	Open in IMG/M
3300032059\|Ga0318533_10185243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia gtarii	1485	Open in IMG/M
3300032063\|Ga0318504_10217372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_38_11	895	Open in IMG/M
3300032066\|Ga0318514_10025973	Not Available	2710	Open in IMG/M
3300032076\|Ga0306924_11959325	Not Available	605	Open in IMG/M
3300032091\|Ga0318577_10099733	Not Available	1358	Open in IMG/M
3300032091\|Ga0318577_10343210	Not Available	714	Open in IMG/M
3300032094\|Ga0318540_10528195	Not Available	569	Open in IMG/M
3300032180\|Ga0307471_101489931	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300032261\|Ga0306920_101491432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	966	Open in IMG/M
3300032261\|Ga0306920_102833332	All Organisms → cellular organisms → Bacteria → Proteobacteria	659	Open in IMG/M
3300032261\|Ga0306920_104134765	Not Available	524	Open in IMG/M
3300032892\|Ga0335081_12220439	Not Available	577	Open in IMG/M
3300033290\|Ga0318519_10629150	Not Available	653	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.02%
Aquatic	Environmental → Aquatic	1.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.05%
Cave	Environmental → Terrestrial → Cave	2.97%
Freshwater	Environmental → Aquatic → Freshwater	1.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.11%
Loam	Environmental → Terrestrial → Soil → Loam	4.95%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	2.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.98%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	77.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.96%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	2.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.99%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.99%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.99%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.99%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	51.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.97%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	2.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.98%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.99%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_100202241	3300001867	Forest Soil	MRLDRLTFTALGGIAVFLIGTALLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQQEWRNGIKAPWNR*
Ga0062386_1006880534	3300004152	Bog Forest Soil	EAWAIVPGLRWDRLTFTALGGVAAFVIGIALLLGDERPLFAPVFGMVGGIGTLAMANHERLKLRVDALEKRLAQREWRERAETPWDG*
Ga0066688_106025532	3300005178	Soil	MRWNRLTFTALGGIAAFLIGIALLLGDERPLFAPVFGMVGGIASLAMANHERLKLRVDALEKRLAQREWRERAETPWDG*
Ga0008090_142897172	3300005363	Tropical Rainforest Soil	MPSPDGPAARSAHDRLTFTALGGIAAFLMGIGVLVDGERALFAPVFGMVGGIAALAMSNHERLKLRVDALETRLAQREWRERAEAPWDR*
Ga0066903_1001464286	3300005764	Tropical Forest Soil	MRWDRLTFTALGGIAVFLIGTVLLIEDGPALFASVFGMVRGIAAVASANHERLRERVEALEKRLAQREWRGGIKAPWNR*
Ga0070712_1008715983	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRLDRLTFTALGGIAVFLIGTALLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQQEWRNGIRAPWNR*
Ga0126376_111100242	3300010359	Tropical Forest Soil	MRWDRLTFTALGGVAAFLVGIALLLGDERPLFAPVFGMVGGIAALAMANHERLKLRVDALEKRLAEREWRERAEAPWDG*
Ga0126376_112021661	3300010359	Tropical Forest Soil	MRWDRLTFTALGGIAVFLIGTVLLIEDGPALFASVFGMVRGIAAVASANHERLRERVEALEKRLAQREWRDGIKAPWNR*
Ga0126378_110874801	3300010361	Tropical Forest Soil	MRWDRLTFTALGGVAAFLVGIALLLADERPLFAPVFGMVGGIAALAMANHERLKLRVDALEKRLAQREWRERAEAPRDG*
Ga0126381_1026218102	3300010376	Tropical Forest Soil	MVPGMRWDRLTFTALGGIAAFLVGIALLLGDERPLFAPVLGMVGGIGALAMANHERLKLRVDALEKRLGQREWRERAETRWGA*
Ga0126381_1026389122	3300010376	Tropical Forest Soil	LSRHQSAEYRRGGVAAFLIGIALLVGDERPLFAPGFGMVGGIAALAMANHERLKLRVDALEKRLAQREWREQAETRWDG*
Ga0126381_1031588752	3300010376	Tropical Forest Soil	MRWDRLTLTAIGGIAGLLLGIALLLDDERSLFAPVFAMVSGFAALVMANHERLRLRVNALEERLAQPEWRERAELRSDR*
Ga0137363_112178531	3300012202	Vadose Zone Soil	MRWDRHTMTASGGIAALLIGAAMLLEDARPLFAPLIGMVGGIAALALANHERLKLRMDALEQRLAQREWRER*
Ga0137361_107212532	3300012362	Vadose Zone Soil	MRWDRHTMTASGGIAALLIGAAMLLEDARPLFAPLIGTVGGIAALALANHERLKLRMDALEQRLAQREWRER*
Ga0137394_105178143	3300012922	Vadose Zone Soil	MIAGCGGTRHTLTAIGGIVALLIGGALLLEDARPLFAPVIGMVGGIAALALAHHARLKLRIEALEQRLAQREWRER*
Ga0182036_116360271	3300016270	Soil	MMPGMRWDRLTFTALGGVAAFLVGIGLLLGDERPLFAPVFGMVGGIGALAMANHERLKLRVDALKTRLAQREWRERAERRWGG
Ga0182041_106572972	3300016294	Soil	MRWDRLTFTALGGVAAFLVGIALLLGDERPLFAPVFGMVGGIGALAMANHERLKLGVDALEKRIGQREWREQAVTRWDA
Ga0182041_119641342	3300016294	Soil	FMIVRLMRWDHITLTAFAGLAALVIGGVMLLEDARSLFAPVIGMVGGIAALALANHERLKLRMDALEKRLAQREWRER
Ga0182034_108370122	3300016371	Soil	MRWDRLTFTALGGVAAFLVGTALLLGDERPLFAPVFGMVGGIGALAMANHERLKLRVDALETRLAQREWRDRAETRWDG
Ga0182034_117300561	3300016371	Soil	MRWDRLTFTALGGVAAFLVGIALLLGDERPLFAPVFGMVGGIGALAMANHERLKLRVDALEKRLAQREWRERAETRWDGCRPRNMI
Ga0182040_100209233	3300016387	Soil	MRWDRLTFTALGGIAVFLVETVVLIEDGRALFAPVFGMVRGIAAVASANHERLRERVGALEKRLAQQEWRDGIKAPWNR
Ga0182040_115961022	3300016387	Soil	MMPGMRWDRLTFTALGGVAAFLLGIALLLGDERPLFAPVFGMVGGIGALAMANHERLKLRVDALEKRLGQREWRERAETRWDG
Ga0182037_116011962	3300016404	Soil	VPGMGWDRLTFTALGGVAAFLLGIALLIGDERPLFAPVFGMVGGIGALAMANHERLKLRVDALEKRLAQREWRERAETRWDGCRPRNMI
Ga0182037_120971261	3300016404	Soil	MRWDRLTWMALGGVAALLMGIGWLIEDESSLFAPVFGMVGGIATLAMANHERLKVRVEVLEKRLAQREWRERSEAR
Ga0182039_106026151	3300016422	Soil	ERPAIVRLMRLDRLTFTALGGIAVFLIGTALLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQQEWRNGIKAPWNR
Ga0182039_107234461	3300016422	Soil	MRLDRLTFTALGGIAVFLIGTALLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRL
Ga0182039_119501922	3300016422	Soil	MRWDRLTFTALGGVAAFLVGTALLLGDERPLFAPVFGMVGGIGALAMANHERLKLRVDALETRLAQREWRERAETRWDG
Ga0187819_103849023	3300017943	Freshwater Sediment	MRLDRLTFTALGGIAVFLIGTALLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQQEWRNGIKAPWNR
Ga0210407_107027392	3300020579	Soil	IVRLMRLDRLTFTALGGIAVFLIGTALLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQQEWRNGIRAPWNR
Ga0210403_103504513	3300020580	Soil	MRWDRLTFTALGGIAAFLIGIALLLGDERPLFAPVFGMVGGIATLAMANHERLKLRVDALEKRLAQREWRERAEPPWDG
Ga0210403_106316172	3300020580	Soil	MRWDRLTFTALGGIAVFLIGIGLLLEDERTLFAPVFGMVGGIAALAMANHERLKLRVDAQETRLAQREWRERAEAPWDR
Ga0210399_110220212	3300020581	Soil	MRWDRLTFTALGGIAAFLVGIALLLGDERPLFAPVFGMVGGIATLAMANHERLKLRVDALEKRLAQREWRERAETPWDG
Ga0210406_104173153	3300021168	Soil	VGDRAGHALGPAHFHGLGGIAAFLIGIALLLGDERPLFAPVFGMVGGIATLAMANHERLKLRVDALEKRLAQREWRERAETPWDG
Ga0210408_102997063	3300021178	Soil	VGDRAGHALGPAHFHGLGGIAAFLIGIALLLGDERPLFAPVFGMVGGIATLAMANHERLRLRVDALEKRLAQREWRERAETPWDG
Ga0210387_112941011	3300021405	Soil	TALGGIAAFLIGTALLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQQEWRNGIKAPWNR
Ga0187846_1000077418	3300021476	Biofilm	LPILADMRWDRLTLTALGGIAALLLGIALLLEDEQELFAPLFAMVGGMAALTMANHERLRLRVDALEKRLAQREWRERAETLCDR
Ga0187846_100051487	3300021476	Biofilm	MRWDRLTLTALGGIAVFLIGTALLFADGQGLFAPVFGMVGGIAALALANHERLTARAEALGKRLAQREWREGARARWNQ
Ga0187846_100966471	3300021476	Biofilm	MRWDRLTFTALGGIAVFLIGTVLLIEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQQEWREGMKAPWNR
Ga0126371_100267356	3300021560	Tropical Forest Soil	MRWDRLTFTALGGIAVFLIGTVLLIEDGPALFASVFGMVRGIAAVASANHERLRERVEALEKRLAQWEWRGGIKAPWNR
Ga0209214_10109841	3300027071	Forest Soil	TLTALGGIAVFLIGTALLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQQEWRNGIRAPWNR
Ga0209418_10142723	3300027371	Forest Soil	MRLDRLTFTALGGIAVFLIGTALLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQQEWRDGIKAPWNR
Ga0222749_102856771	3300029636	Soil	MRLDRLTFTALGGIAVFLIGTALLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQ
Ga0170824_1151670182	3300031231	Forest Soil	MRWDRLTFTALGGVAAFLIGIALLLGDERPLFAPVFGVVGGIATLAMANHERLKLRVDALEKRLAQREWRERAQTPWDG
Ga0318516_104055471	3300031543	Soil	MRWDRLTLTALGGIVALLLGIALLLEDEQGLFAPLFAMVGGMAALTMANHERLRLRVDALEKRLAQREWRERAEARWDR
Ga0318516_104259831	3300031543	Soil	MRWDRLTFTALGGVAAFLVGIGLLLGDERPLFAPVFGMVGGIGALAMANHERLKLRVDALEKRLAQREWRERAEARWDG
Ga0318541_100404281	3300031545	Soil	MRWDRLTLTALGGIVALLLGIALLLEDEQGLFAPLFAMVGGMAALTMANHERLRLRVDALEKRLAQREWRERAET
Ga0318541_100482112	3300031545	Soil	MVPGMRWDRLTFTALGGVAAFLVGIGLLLGDERPLFAPVFGMVDGIGALAMANHKRLKLRVDVLEKRLGQREWRERAETRWDA
Ga0318541_104554082	3300031545	Soil	MRLDRLTFTALGGIAVFLIGTALLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQQ
Ga0318528_103839542	3300031561	Soil	LTALGGIAAFLMGIALLLGDERPLFAPVFGMVGGIAALAMANHERLKLRVEALEKRLAQRDWRERAETRWDR
Ga0318528_106613192	3300031561	Soil	MVPGMRWDRLTFTALGGVAAFLVGIGLLLGDERPLFAPVFGMVGGIGALAMANHERLKLRVDVLEKRLGQREWRERAETRWDA
Ga0310915_112603201	3300031573	Soil	MRLDRLTFTVLGGIAVFLIGTGLLLEDGRALFAPVFGIVGGIAAVASANHERLRERVEALEKRLAQQEWRNGIKAPWNR
Ga0318555_106167701	3300031640	Soil	MVPGMRWDRLTFTALGGVAAFLVGIGLLLGDERPLFAPVFGMVGGIGALAMANHERLKLRVDALEKRLGQREWRERAETRWDG
Ga0318542_101451343	3300031668	Soil	MRWDRLTLTALGGIVALLLGIALLLEDEQGLFAPLFAMVGGMAALTMANHERLRLRVDALEKRLAQREWRERAETQCDR
Ga0318542_101943871	3300031668	Soil	MVPGMRWDRLTFTALGGVAAFLVGIGLLLGDERPLFAPVFGMVGGIGALAMANHERLKLRVDVLEKRLGQR
Ga0318542_107349711	3300031668	Soil	MRWDRLTFTALGGVAAFLVGIALLLGDERPLFAPVFGMVGGIGALAMANHERLKLRVDALEKRLGQREWRERAETRWDG
Ga0318574_107372911	3300031680	Soil	MVPGMRWDRLTFTALGGVAAFLVGIGLLLGDERPLFAPVFGMVGGIGALAMANHERLKLRVDVLEKRLGQREWRERAET
Ga0318572_102839361	3300031681	Soil	WDRLTLTALGGIVALLLGIALLLEDEQGLFAPLFAMVGGMAALTMANHERLRLRVDALEKRLAQREWRERAET
Ga0306918_101741202	3300031744	Soil	MRWDRLTFTALGGIAVFLIGTVLLIEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQREWRDGIKAPWNR
Ga0318492_100202342	3300031748	Soil	MRLDRLTFTALGGIAVFLIGTALLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQQEWRNGIKAPWN
Ga0318509_101032612	3300031768	Soil	MRWDRLTFTALGGIAVFLIETVVLIEDGRALFAPVFGMVRGIAAVASANHERLRERVGALEKRLAQQEWRDGIKAPWNRRE
Ga0318509_107300172	3300031768	Soil	MRWDRLTFTALGGVAAFLVGIALLLGDERPLFAPVFGMVGGIGALAMANHERLKLRVDALEKRLAQREWRERAEARWDG
Ga0318543_102394021	3300031777	Soil	MRWDRLTFTALGGIAVFLIETVVLIEDGRALFAPVFGMVRGIAAVASANHERLRERVGALEKRLAQQEWRDGIKAPWNRREADT
Ga0318498_105366601	3300031778	Soil	MRWDRLTLTALGGIVALLLGIALLLEDEQGLFAPLFAMVGGMAALTMANHERLRLRVDALEKRLAQ
Ga0318508_10624531	3300031780	Soil	VDNHHQLLGAAGDCPAHALGPAHLTALGGIAVFLIGTALLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQQEWRNGIKAPWNR
Ga0318547_110487322	3300031781	Soil	MRWDRLTFTALGGVAAFLVGTALLLGDERPLFAPVFGMVGGIGALAMANHERLKLRVDALEKRLGQREWRERAETRWDG
Ga0318548_100663001	3300031793	Soil	AHLTALGGIAVFLIGTALLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQQEWRNGIKAPWNR
Ga0318503_100616783	3300031794	Soil	MRLDRLTFTALCGIAVFLIGTGLLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQQEWRNGIKAPWNR
Ga0318565_105450442	3300031799	Soil	MRWDRLTFTALGGIAVFLIETVVLIEDGRALFAPVFGMVRGIAAVASANHERLRERVGALEKRLAQ
Ga0307478_101376443	3300031823	Hardwood Forest Soil	MRLDRLTFTALGGIAVFLIGTALLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQQEWRNGLKAPWNR
Ga0318512_100394822	3300031846	Soil	MRLDRLTFTALCGIAVFLIGTALLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQQEWRNGIKAPWNR
Ga0318527_104222722	3300031859	Soil	MRWDRLTLTALGGIVALLLGIALLLEDEQGLFAPLFAMVGGMAALTMANHERLRLRVDALEKRLAQREWRER
Ga0306919_111479642	3300031879	Soil	MRWDRLTFTALGGVAAFLVGTALLLGDERPLFAPVFGMVGGIGALAMANHERLKLGVDALEKRIGQREWREQAVTRWDA
Ga0318544_100331653	3300031880	Soil	MVPGMRWDRLTFTALGGVAAFLVGIGLLLGDERPLFAPVFGMVGGIGALAMANHERLKLRVDVLEKRLGQREWRERAETRW
Ga0318536_100298321	3300031893	Soil	MRWDRLTFTALGGIAVFLIETVVLIEDGRALFAPVFGMVRGIAAVASANHERLRERVGALEKRLAQQEWRDGIKAPWNRREAD
Ga0318536_106905551	3300031893	Soil	MVPGMRWDRLTFTALGGVAAFLVGIGLLLGDERPLFAPVFGMVGGIGALAMANHERLKLRVDVLEKRLG
Ga0318522_104176671	3300031894	Soil	MRWDRLTFTALGGIAVFLIETVVLIEDGRALFAPVFGMVRGIAAVASANHERLRERVGALEKRLAQQ
Ga0318520_101657903	3300031897	Soil	MRLDRLTFTALCGIAVFLIGTALLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQQEWRNGI
Ga0318520_103630702	3300031897	Soil	MRLDRLTFTALGGIAVFLIGTALLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQQEWRNGI
Ga0306923_107222163	3300031910	Soil	MRLDRLTFTALCGIAVFLIGTGLLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQQE
Ga0306921_103953121	3300031912	Soil	MMPGMRWDRLTFTALGGVAAFLVGIGLLLGDERPLFAPVFGMVGGIGALAMANHERLKLRVDALEKRLTQREWQERAETRWDT
Ga0306921_113780141	3300031912	Soil	MRLDRLTFTALGGTAAFLMGIGLLLEGERALFAPVFGMVGGIAALAMANHERLKLRVDALETRLAQREWRERAEAPWDR
Ga0310916_100311113	3300031942	Soil	MRWDRLTFTALGGIAVFLIETVVLIEDGRALFAPVFGMVRGIAAVASANHERLRERVGALEKRLAQQEWRDGIKAPWNR
Ga0310910_111971071	3300031946	Soil	GMRWDRLTFTALGGVAAFLLGIALLIGDERPLFAPVFGMVGGIGALAMANHERLKLRVDALKTRLAQREWRERAERRWGG
Ga0306926_114875801	3300031954	Soil	MRWDRLTWMALGGVAALLIGIGWLMEDEFSLFAPVFGMVGGIATLAMANHERLKVRVEVLEKRLAQREWRERSEARGHE
Ga0306926_124962631	3300031954	Soil	VPGMGWDRLTFTALGGVAAFLLGIALLIGDERPLFAPVFGMVGGIGALAMANHERLKLRVDALEKRLAQREWRERAETRWDG
Ga0318563_102915411	3300032009	Soil	MRLDRLTFTALGGIAVFLIGTALLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQQEWRDGIKAPW
Ga0318507_100830481	3300032025	Soil	MRWDRLTFTALGGIAVFLIETVVLIEDGRALFAPVFGMVRGIAAVASANHERLRERVGALEKRLA
Ga0318558_102023962	3300032044	Soil	MRWDRLTFTALGGIAVFLIGTALLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAQQEWRNGIKAPWNR
Ga0318533_101852433	3300032059	Soil	FTALGGIAVFLIETVVLIEDGRALFAPVFGMVRGIAAVASANHERLRERVGALEKRLAQQEWRDGIKAPWNR
Ga0318504_102173722	3300032063	Soil	MRWDRLTFTALGGVAAFLVGIALLLGDERPLFAPVFGMVGGIGALAMANHERLKLRVDALEKRLGQR
Ga0318514_100259732	3300032066	Soil	MRLDRLTFTALGGIAVFLIGTALLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEALEKRLAKQEWRNGIKAPWNR
Ga0306924_119593252	3300032076	Soil	MRWDRLTWMALGGVAALLIGIGWLIEDESSLFAPVFGMVGGIATLAMANHERLKVRVEVLEKRLAQREWRERSEARGHE
Ga0318577_100997331	3300032091	Soil	MRWDRLTFTALGGIAVFLIETVVLIEDGRALFAPVFGMVRGIAAVASANHERLRERVGALEKRLAQQEW
Ga0318577_103432103	3300032091	Soil	GASAIVPGMRWDRLTFTALGGVAAFLLGIALLLGDERPLFAPVFGMVGGIGALAMANHERLKLRVDALEKRLGQREWRERAETRWDG
Ga0318540_105281951	3300032094	Soil	MRWDRLTFTALGGVAAFLVGIALLLGDERPLFAPVFGMVGGIGALAMANHERLKLRVDALEKRLAQREWRERAETRWDG
Ga0307471_1014899313	3300032180	Hardwood Forest Soil	MRLDRLTFTVLGGIAVFLIGTALLLEDGRALFAPVFGMVGGIAAVASANHERLRERVEAVEKRLAQQEWRNGIKAPWNR
Ga0306920_1014914323	3300032261	Soil	MRWDRLTFTALGGVAAFLLGIALLLGDERPLFAPVFGMVGGIGALAMANHERLKLRVDALETRLAQREWRDRAEARWDG
Ga0306920_1028333322	3300032261	Soil	MRWDRLTFTALGGVAAFLLGIALLIGDERPLFAPVFGMVGGIGALAMANHERLKLRVDALKTRLAQREWRERAERRWGG
Ga0306920_1041347652	3300032261	Soil	MPGMRWDRLTFTALGGVAAFLLGIALLIGDERPLFAPVFGMVGGIGALAMANHERLKLRVDALEKRLAQREWRERAEARWDG
Ga0335081_122204392	3300032892	Soil	RLTFTALGGVAAFLVGIALLLGDERPLFAPVVGMVGGIGALAMANHERLKLRVDALEKRLTQREWGDRAEKAWDG
Ga0318519_106291502	3300033290	Soil	MRWDRLTFTALGGVAAFLLGIALLLGDERPLFAPVFGMVGGIGALAMANHERLKLRVDALETRLAQREWRERAETRWDG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103651

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences