Metagenome / Metatranscriptome Family F103673

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103673
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	90 residues
Representative Sequence	MKRFASSLVLASALAVTVLSPAVAARHHRPHFVFARLGAGVCDGLVCTGAFFATLPDACGLVFVPSTTRFVRPVSQGVCPSGLGVTVYEMVR
Number of Associated Samples	79
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.00 %
% of genes near scaffold ends (potentially truncated)	38.61 %
% of genes from short scaffolds (< 2000 bps)	96.04 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (80.198 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.564 % of family members)
Environment Ontology (ENVO)	Unclassified (53.465 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.386 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 7.50% β-sheet: 29.17% Coil/Unstructured: 63.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF04392	ABC_sub_bind	2.97
PF02796	HTH_7	2.97
PF00239	Resolvase	1.98
PF00905	Transpeptidase	1.98
PF07690	MFS_1	0.99
PF01436	NHL	0.99
PF03928	HbpS-like	0.99
PF00083	Sugar_tr	0.99
PF01799	Fer2_2	0.99
PF01042	Ribonuc_L-PSP	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.97
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.98
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.98
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.20 %
All Organisms	root	All Organisms	19.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.20 %
cellular organisms	root	All Organisms → cellular organisms	19.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.20 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	19.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.20 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.20 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.96 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.98 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.99 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.20 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.98 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	1.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.99 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.20 %
Salipiger	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Salipiger	1.98 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.99 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.20 %
Salipiger abyssi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Salipiger → Salipiger abyssi	1.98 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.99 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.20 %
Salipiger abyssi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Salipiger → Salipiger abyssi	1.98 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.99 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_10187106	Not Available	1105	Open in IMG/M
3300004091\|Ga0062387_100086105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1644	Open in IMG/M
3300004152\|Ga0062386_100485938	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300005610\|Ga0070763_10213241	Not Available	1034	Open in IMG/M
3300005764\|Ga0066903_100601660	Not Available	1905	Open in IMG/M
3300005764\|Ga0066903_100738157	All Organisms → cellular organisms → Bacteria	1745	Open in IMG/M
3300005764\|Ga0066903_101422247	Not Available	1304	Open in IMG/M
3300005764\|Ga0066903_103220854	Not Available	883	Open in IMG/M
3300006086\|Ga0075019_10353077	Not Available	893	Open in IMG/M
3300006175\|Ga0070712_100413991	Not Available	1116	Open in IMG/M
3300009525\|Ga0116220_10153514	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300009683\|Ga0116224_10314407	Not Available	745	Open in IMG/M
3300009800\|Ga0105069_1028268	Not Available	608	Open in IMG/M
3300014168\|Ga0181534_10685292	Not Available	597	Open in IMG/M
3300014199\|Ga0181535_10157267	Not Available	1420	Open in IMG/M
3300014493\|Ga0182016_10139434	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300014658\|Ga0181519_10173699	Not Available	1366	Open in IMG/M
3300016294\|Ga0182041_11131409	Not Available	712	Open in IMG/M
3300016294\|Ga0182041_11142811	Not Available	708	Open in IMG/M
3300016319\|Ga0182033_10634098	Not Available	931	Open in IMG/M
3300016319\|Ga0182033_12076193	Not Available	518	Open in IMG/M
3300016341\|Ga0182035_10424891	Not Available	1121	Open in IMG/M
3300016341\|Ga0182035_10613459	Not Available	941	Open in IMG/M
3300016404\|Ga0182037_11890870	Not Available	534	Open in IMG/M
3300016422\|Ga0182039_10284862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1362	Open in IMG/M
3300016422\|Ga0182039_10437145	Not Available	1118	Open in IMG/M
3300016445\|Ga0182038_11673386	Not Available	573	Open in IMG/M
3300018042\|Ga0187871_10845776	Not Available	511	Open in IMG/M
3300018060\|Ga0187765_10560287	Not Available	732	Open in IMG/M
3300018085\|Ga0187772_10825301	Not Available	670	Open in IMG/M
3300019278\|Ga0187800_1451990	Not Available	512	Open in IMG/M
3300020582\|Ga0210395_10311876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1183	Open in IMG/M
3300021171\|Ga0210405_11081044	Not Available	601	Open in IMG/M
3300021180\|Ga0210396_11000366	Not Available	708	Open in IMG/M
3300021407\|Ga0210383_10730695	Not Available	850	Open in IMG/M
3300021475\|Ga0210392_11478725	Not Available	508	Open in IMG/M
3300021478\|Ga0210402_10216681	All Organisms → cellular organisms → Bacteria	1762	Open in IMG/M
3300021478\|Ga0210402_10268302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	1577	Open in IMG/M
3300021478\|Ga0210402_10441145	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300021478\|Ga0210402_11173049	Not Available	695	Open in IMG/M
3300022506\|Ga0242648_1100387	Not Available	504	Open in IMG/M
3300022510\|Ga0242652_1047446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Salipiger → Salipiger abyssi	536	Open in IMG/M
3300022530\|Ga0242658_1089930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Salipiger → Salipiger abyssi	719	Open in IMG/M
3300022533\|Ga0242662_10076679	Not Available	914	Open in IMG/M
3300022533\|Ga0242662_10276199	Not Available	553	Open in IMG/M
3300022722\|Ga0242657_1148774	Not Available	616	Open in IMG/M
3300022726\|Ga0242654_10341563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300025916\|Ga0207663_11659125	Not Available	514	Open in IMG/M
3300027568\|Ga0208042_1167707	Not Available	548	Open in IMG/M
3300027829\|Ga0209773_10059867	Not Available	1546	Open in IMG/M
3300027910\|Ga0209583_10526727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	589	Open in IMG/M
3300030991\|Ga0073994_11118679	Not Available	548	Open in IMG/M
3300031231\|Ga0170824_120529999	Not Available	502	Open in IMG/M
3300031446\|Ga0170820_15190309	Not Available	801	Open in IMG/M
3300031543\|Ga0318516_10166900	Not Available	1266	Open in IMG/M
3300031543\|Ga0318516_10597603	Not Available	630	Open in IMG/M
3300031545\|Ga0318541_10691942	Not Available	569	Open in IMG/M
3300031549\|Ga0318571_10403253	Not Available	534	Open in IMG/M
3300031561\|Ga0318528_10727769	Not Available	531	Open in IMG/M
3300031564\|Ga0318573_10620561	Not Available	582	Open in IMG/M
3300031573\|Ga0310915_10040594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2962	Open in IMG/M
3300031573\|Ga0310915_10072803	All Organisms → cellular organisms → Bacteria → Proteobacteria	2268	Open in IMG/M
3300031640\|Ga0318555_10514535	Not Available	649	Open in IMG/M
3300031668\|Ga0318542_10281068	Not Available	850	Open in IMG/M
3300031681\|Ga0318572_10981058	Not Available	502	Open in IMG/M
3300031719\|Ga0306917_10270764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1306	Open in IMG/M
3300031719\|Ga0306917_10597431	Not Available	868	Open in IMG/M
3300031719\|Ga0306917_10883051	Not Available	700	Open in IMG/M
3300031719\|Ga0306917_11575294	Not Available	504	Open in IMG/M
3300031744\|Ga0306918_10271755	Not Available	1299	Open in IMG/M
3300031744\|Ga0306918_11047834	Not Available	633	Open in IMG/M
3300031771\|Ga0318546_11070452	Not Available	567	Open in IMG/M
3300031782\|Ga0318552_10316568	Not Available	794	Open in IMG/M
3300031879\|Ga0306919_10610014	Not Available	842	Open in IMG/M
3300031879\|Ga0306919_10867009	Not Available	693	Open in IMG/M
3300031879\|Ga0306919_10878289	Not Available	688	Open in IMG/M
3300031880\|Ga0318544_10171542	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300031890\|Ga0306925_11010287	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300031890\|Ga0306925_11303962	Not Available	721	Open in IMG/M
3300031893\|Ga0318536_10630541	Not Available	535	Open in IMG/M
3300031896\|Ga0318551_10852371	Not Available	531	Open in IMG/M
3300031910\|Ga0306923_12094967	Not Available	571	Open in IMG/M
3300031941\|Ga0310912_11222857	Not Available	571	Open in IMG/M
3300031942\|Ga0310916_11198164	Not Available	628	Open in IMG/M
3300031942\|Ga0310916_11679602	Not Available	514	Open in IMG/M
3300031945\|Ga0310913_11198058	Not Available	529	Open in IMG/M
3300031946\|Ga0310910_11269549	Not Available	570	Open in IMG/M
3300031954\|Ga0306926_10109429	All Organisms → cellular organisms → Bacteria → Proteobacteria	3396	Open in IMG/M
3300031954\|Ga0306926_10821707	Not Available	1119	Open in IMG/M
3300031959\|Ga0318530_10425328	Not Available	551	Open in IMG/M
3300031981\|Ga0318531_10521966	Not Available	538	Open in IMG/M
3300032001\|Ga0306922_10262548	Not Available	1856	Open in IMG/M
3300032042\|Ga0318545_10204546	Not Available	707	Open in IMG/M
3300032043\|Ga0318556_10586610	Not Available	582	Open in IMG/M
3300032063\|Ga0318504_10387070	Not Available	666	Open in IMG/M
3300032076\|Ga0306924_11783172	Not Available	642	Open in IMG/M
3300032091\|Ga0318577_10567020	Not Available	540	Open in IMG/M
3300032160\|Ga0311301_11616914	Not Available	787	Open in IMG/M
3300032261\|Ga0306920_104368118	Not Available	507	Open in IMG/M
3300032515\|Ga0348332_10147040	Not Available	654	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.10%
Aquatic	Environmental → Aquatic	9.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.11%
Freshwater	Environmental → Aquatic → Freshwater	7.92%
Sediment	Environmental → Aquatic → Sediment	1.98%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.24%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.92%
Loam	Environmental → Terrestrial → Soil → Loam	6.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.98%
Sand	Environmental → Terrestrial → Soil → Sand	0.99%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	72.28%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.98%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.99%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.73%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.97%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.99%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.99%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.99%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.99%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009800	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_30_40	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022510	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_101871063	3300004080	Bog Forest Soil	MKKFASSLALAAVLAVPALSPAAAYHHRPHYVFARLGAGVCDGLVCSGAFFHHVSDACGLVIVPSTTRYVTPVKHIVCPSGLGVTMYRMIR*
Ga0062387_1000861053	3300004091	Bog Forest Soil	MKGFASSLALAAALAVTALSPAAARHHRPHFVFARVGAGFCNGLVCTGAFFRTLPDACGLVFVPSTTRFVTPVKPIVCPSGLGVTMYRVLK*
Ga0062386_1004859382	3300004152	Bog Forest Soil	MKRFAASVVLALASAVTVLSPAAAYHRPHFVFARLGAGVCNGLICSGAFFATLSDACGAVVVPVTTRFVVPVRQGVCPSGLGVTMYRMVR*
Ga0070763_102132412	3300005610	Soil	MKRFASSLALASALAVTALSPAEAYHHRPHFVFARLGAGVCDGLVCTGAFFATPADACGLVFVPSTTRFVRPVSRAVCPSGLGVTMYEMVR*
Ga0066903_1006016602	3300005764	Tropical Forest Soil	MKRFAVAMAMAMAVTALSPAAAAHYRPHYVFARLGAGVCDGLICSGAFFATLSDACGAVFVPVTTRYVVPVRQGACPSGLGVTLYRMVR*
Ga0066903_1007381573	3300005764	Tropical Forest Soil	VKRFAMSIVLALASAVAVLSPAAAAHHRPHFVFARLGAGVCDALTCSGAFFATLPDACGAVVVPVTTRFVRPVRQMVCPSGLGVTMYRMVR*
Ga0066903_1014222472	3300005764	Tropical Forest Soil	MKRFASSLVLASALAVTALSPALARHYRPHFVFARLGAGVCDGLVCTGAFFATLPDACSLVFVPSTTRFVRPVRQGICPSGLGVTMYEMVR*
Ga0066903_1032208541	3300005764	Tropical Forest Soil	MKRFASSLVLASALAVTVLSPAVAARYRPHFVFARLGAGVCDGMVCSGAFFATLPDACSLVFVPSTTRFVRLVSQGVCPSGLGVAVYEMVR*
Ga0075019_103530771	3300006086	Watersheds	MKRFASSLALASALAVTALSPAEAYHHRPHFVFARLGAGVCDGLVCTGAFFATPADACGLVFVPSTTRFVRPVSRAVCPSGLGVTMYEVVR*
Ga0070712_1004139911	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKRFASSLVLASALAVTVLSPAVAARHHRPHFVFARLGAGVCDGLVCTGAFFATLPDACGLVFVPSTTRFVRPVSQGICPSGLGVTVYEMVR*
Ga0116220_101535141	3300009525	Peatlands Soil	MKRFASSLALASALAVTALSPAVAAHHRPHFVFARIGAGVCNGLVCTGAFFATLPAACGLVMVPSTTRFVRPVRQGVCPSGLGVTMYQMIR*
Ga0116224_103144071	3300009683	Peatlands Soil	ALAVTALSPAEAYHHRPHFVFARLGAGVCDGLVCTGAFFATPADACGLVFVPSTTRFVRPVRHVVCPSGLGVTMYQMIR*
Ga0105069_10282681	3300009800	Groundwater Sand	VLMRRERSSDMKRFAASVVLALASAVTVLSPAAAYHRPRPHFVFARLGAGVCNGLICSGAFFATLSDACGAVFVPVTTRFVVPVRRGVCPSGLGVTMYRMVR*
Ga0181534_106852921	3300014168	Bog	MKKFASSLALASVLAVTALSPAFARHHHPHYVYARLGAGVCDGAVCSGAFFHTLPEACGAVLVPSTTRFVAPVAHLVCPTG
Ga0181535_101572671	3300014199	Bog	RRLEMKRFASSLALASALAVTALSPAAAAHHRPHFVFARIGAGVCDGLVCTGSFFATLPAACGLVMVPSTTRFVTPVKHIVCPSGLGVTMYRMIK*
Ga0182016_101394342	3300014493	Bog	MKKFASSLALASVLAVTALSPAFARHHHPHYVYARLGAGVCDGAVCSGAFFHTLPEACGAVLVPSTTRFVAPVAHLVCPTGLGVTKYLMVK*
Ga0181519_101736991	3300014658	Bog	GGAGRKRRLDMKKFASSLALASVLAVTALSPAFARHHHPHYVYARLGAGVCDGAVCSGAFFHTLPEACGAVLVPSTTRFVAPVAHLVCPTGLGVTKYLMVK*
Ga0182041_111314091	3300016294	Soil	MKRFASSLVLALALAVTVLSPAVAARHHRPHFVFARLGAGVCDGLVCTGAFFATLPDACGLVFVPSTTRFVRPVSQGVCPSGLGVTVYEMVR
Ga0182041_111428112	3300016294	Soil	MKRFASLLALASALAVSALSPAEAYHHRPHFVFARLGAGVCDGLVCTGAFFATPADACSLVFFVPSTTRFVRPVSRAVCPSGLGVTMYEMVR
Ga0182033_106340981	3300016319	Soil	ASAVTALSPAAAAHYRPHYVFARLGAGVCDGLICSGAFFATLSDACGAVFVPVTTRYVVPVRQGACPSGLGVTLYRMVR
Ga0182033_120761931	3300016319	Soil	FAVSVVLGLATAVTVLSPALAYHRPHFVFARLGAGVCDGLICTGAFFATLSDACGAVFVPVETRYVVPVRQGVCPSGLGVTLYRMVR
Ga0182035_104248911	3300016341	Soil	MKRFASSLVLASVLAVTALSPALARHHRPHFVFARLGAGVCDGLVCTGAFFATLPDACSLVFVPSTTRFVRPVRQGVCPSGLGVTMYEMVR
Ga0182035_106134591	3300016341	Soil	MKRFASSLVLASALAVTVLSPAVAARYRPHFVFARLGAGVCDGMVCSGAFFATLPDACSLVFVPSTTRFVRLVSRGVCPSGLGVAVYEMVR
Ga0182037_118908701	3300016404	Soil	LASALAVTVLSPVLAARHHRPHFVFARLGAGVCDGMVCSGAFFATLPDACSLVFVPSTTRFVRLVSQGVCPNGLGVAVYEMVR
Ga0182039_102848621	3300016422	Soil	MKRFASSLVLASALAVTVLSPAVAARYRPHFVFARLGAGVCDGMVCSGAFFATLPDACSLVFVPSTTRFVRLVSQGVCPN
Ga0182039_104371452	3300016422	Soil	VKRFAMSIVLALASAVAVLSPAAAAHHRPHFVFARLGAGVCDALTCSGAFFATLPDACGAVVVPVTTRFVRPVRQMVCPSGLGVTMYRMV
Ga0182038_116733861	3300016445	Soil	VKRFAMSIVLALASAVAVLSPAAAAHHRPHFVFARLGAGVCDALTCSGAFFATLPDACGAVVVPVTTRYVVPVRQGVCPSGLGVTLYRMVR
Ga0187871_108457761	3300018042	Peatland	RFASSLALASALAVTALSPAEAYHHRPHFVFARLGAGVCDGLVCTGAFFATPADACGLVFVPSTTRFVRPVSRAVCPSGLGVTMYEVVR
Ga0187765_105602872	3300018060	Tropical Peatland	MKRFTVSVVLALASAVTVLSPATAAHHRPQFVFARLGAGVCDGLTCSGAFFATLPDACGAVLVPATTRFVRPVRQTVCPSGLGVTMYRMVR
Ga0187784_105258671	3300018062	Tropical Peatland	MKKLAASVALASVLAVTALSPAMARHHHHYAWARLGAGVCTGSTCTGAFFPSLAAACSGVVVPVTTRVVGLVRSGVCPSGLGV
Ga0187772_108253011	3300018085	Tropical Peatland	MKRFAASVVLALASAVTVLSPAAAYHRPHFVFARLGAGVCNGLICSGAFFATLSDACGAVVVPVTTRFVVPVRQGVCPSGLGVTMYRMVR
Ga0187800_14519901	3300019278	Peatland	DFDVLMRRERSSDMKRFAASVVLALASAVTVLSPAAAYHRPHFVFARLGAGVCNGLICSGAFFATLSDACGAVVVPVTTRFVVPVRQGVCPSGLGVTMYRMVR
Ga0210395_103118761	3300020582	Soil	MKRFASSLALASALAVTALSPAEAYHHRPHFVFARLGAGVCDGLVCTGAFFATPADACGLVFVPSTTRFVRPVSRAVCPSGLGVTMYEVVR
Ga0210405_110810442	3300021171	Soil	MKRFASSLVLASALAVTALSPAEARHHRPHFVFARIGAGVCDGVVCTGAFFATLPAACGLVMVPSTTRFVRPVRQVVCPSGLGVTM
Ga0210396_110003661	3300021180	Soil	MKRFASSLALASALAVTALSPAEAYHHRPHFVFARLGAGVCDGLVCTGAFFATPADACGLVFVPSTTRFVRPVSRAVCPSGLGVAMYEVVR
Ga0210383_107306952	3300021407	Soil	MKRFASSLALASALAVTALSPAAAAHHRPHFVFARIGAGVCDGLVCTGSFFATLPAACGLVMVPSTTRFVTPVKHIVCPSGLGVTMYRMIK
Ga0210392_114787251	3300021475	Soil	MKRFAVSVALALVSAVTALSPALAAHHRPVYVFARLGAGVCNGLVCSGAFFATPYDACGAAVVPVTTRYVRLVSQSTCP
Ga0210402_102166813	3300021478	Soil	MKRLAVSVALALVSAVTVLSPALAAHHRPHYVFARLGAGVCDGLVCSGAFFATPADACGAVVVPVTTRYVRLVSQSICPSGLGVSM
Ga0210402_102683023	3300021478	Soil	MKRFAVSVALALVSAVTALSPALAAHHRPVYVFARLGAGVCNGLVCSGAFFATPYDACGAAVVPVTTRYVRLVSQSTCPSGLGVSMYRMVR
Ga0210402_104411452	3300021478	Soil	MKRFAVSVALALVSAVTALSPALAAHHRPVYVFARLGAGVCNGLVCSGAFFATPFDACGAVFVPVTTRYVRLVRQSTCPSGLGVSMYQMVR
Ga0210402_111730491	3300021478	Soil	MKRFASALALASVLAVTALSPAAAAHHRPHYVFARVGAGVCDGMVCTGAFFATPADACGLVVVPTTTRYVRPVRSSVCPSGLGVTMYRMVR
Ga0242648_11003871	3300022506	Soil	AMKRFTSSLALASALALTALSPAVAAHHRPHFVFARLGAGVCDGLVCTGAFFATPADACGLVFVPSTTRFVRPVSRAVCPSGLGVTMYEVVR
Ga0242652_10474462	3300022510	Soil	MKRFASSLALASALAVTALSPAEAYHHRPHFVFARLGAGVCDGLVCTGAFFATPADACGLVFVSTTTRFVRPVGRAVCPSGLGVTMYQMVR
Ga0242658_10899301	3300022530	Soil	MNSFASSLALASALAVTALSPAEAYHHRPHFVFARLGAGVCDGLVCTGAFFATPADACGLVFVSTTTRFVRPVGRAVCPSGLGVTMYQMVR
Ga0242662_100766792	3300022533	Soil	AVNITGRADARGERRSEMKRFASALALASVLAVTALSPAAAAHHRPHYVFARVGAGVCDGMVCTGAFFATPADACGLVVVPTTTRYVRPVRSSVCPSGLGVTMYRMVR
Ga0242662_102761991	3300022533	Soil	VFDVKRFAMSIVLALASAVAVLSPAAAAHHRPHFVFARLGAGVCDALTCSGAFFATLPDACGAVVVPVTTRFVRPVRQMVCPSGLGVTMYRMVR
Ga0242657_11487741	3300022722	Soil	CFMKRFASSLALAAAVAVTALSPAEAYHHRPHFVFARVGAGVCDGLTCTGAFFATPADACGLVFVPTTTRFVRPVSRAVCPSGLGVTMYEVVR
Ga0242654_103415632	3300022726	Soil	RLEMNSFASSLALASALAVTALSPAEAYHHRPHFVFARLGAGVCDGLVCTGAFFATPADACGLVFVSTTTRFVRPVGRAVCPSGLGVTMYQMVR
Ga0207663_116591251	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKRFASSLMLASALAVTVLSPAVAARHHRPHFVFARLGAGVCDGLVCTGAFFATLPDACGLVFVPSTTRFVRPVSQGICPSGLGVTVYEMVR
Ga0208042_11677071	3300027568	Peatlands Soil	MKRFASSLALASALAVTALSPAVAAHHRPHFVFARIGAGVCNGLVCTGAFFATLPAACGLVMVPSTTRFVRPVRQGVCPSGLGVTMYQMIR
Ga0209773_100598671	3300027829	Bog Forest Soil	MKGFASSLALAAALAVTALSPAAARHHRPHFVFARVGAGFCNGLVCTGAFFRTLPDACGLVFVPSTTRFVTPVKPIVCPSGLGVTMYRVLK
Ga0209583_105267271	3300027910	Watersheds	MKTFASALALASVLAVTALSPAAAAHHRPHYVFARVGAGVCDGMVCTGAFFATPADACGLVVVPTTTRYVRPVRSSVCPSGLGVSMYQMVR
Ga0073994_111186791	3300030991	Soil	MKRFVSSLALASAVAVTALSPAEVYHHRPHFVFARVGAGVCDGLVCTGAFFATPADACSLVFFVPSTTRFVRPVSRAVCPSGLGVTMYEMVR
Ga0170824_1205299992	3300031231	Forest Soil	MKRLAVSVGLAVASGVTALSPAAAAHHRPHYVFARLGAGVCDGLVCSGAFFATPSDACGVVVVPVTTRYVRLVGQSTCPSGLGVSMYRMVR
Ga0170820_151903092	3300031446	Forest Soil	MKRFASSLALASALAVTALSPAEAYHHRPHFVFARLGAGVCDGLVCTGAFFATPADACSLVFFVPSTTRFVRPVSRGVCPSGLGVTMYEMVR
Ga0318516_101669001	3300031543	Soil	MKRFASSLVLASVLAVTVLSPAVAARYRPHFVFARLGAGVCDGMVCSGAFFATLPDACGLGFVPSTTRFVRLVSQGVCPSGLGVAVYEMVR
Ga0318516_105976032	3300031543	Soil	VKRFAMSIVLALASAVAVFSPAAAAHHRPHFVFARLGAGVCDALTCSGAFFATLPDACGAVVVPVTTRFVRPVRQMVCPSGLGVTMYRMVR
Ga0318541_106919421	3300031545	Soil	LALASAVAVFSPAAAAHHRPHFVFARLGAGVCDALTCSGAFFATLPDACGAVVVPVTTRFVRPVRQMVCPSGLGVTMYRMVR
Ga0318571_104032531	3300031549	Soil	LTCGGRGVFDVKRFAMSIVLALASAVAVFSPAAAAHHRPHFVFARLGAGVCDALTCSGAFFATLPDACGAVVVPVTTRFVRPVRQMVCPSGLGVTMYRMVR
Ga0318528_107277691	3300031561	Soil	MKRFASSLVLASVLAVTVLSPAVAARYRPHFVFARLGAGVCDGMVCSGAFFATLPDACGLGFVPSTTRFVRLVSQGVCPSGLGSRPW
Ga0318573_106205612	3300031564	Soil	MKRFASSLVLASVLAVTVLSSAVAARYRPHFVFARLGAGVCDGMVCSGAFFATLPDACGLGFVPSTTRFVRLVSQGVCPSGLGVAVYEMVR
Ga0310915_100405942	3300031573	Soil	MKRFASSLVLASALAVTVLSPAVAARHHRPHFVFARLGAGVCDGMVCSGAFFATLPDACGLGFVPSTTRFVRLVSQGVCPSGLGVAVYEMVR
Ga0310915_100728032	3300031573	Soil	MSIVLALASAVAVFSPAAAAHHRPHFVFARLGAGVRDALTCSGAFFATLPDACGAVVVPVTTRFVRPVRQMVCPSGLGVTMYRMVR
Ga0318555_105145351	3300031640	Soil	MKRFASSLVLASVLAVTALSPALARHHRPHFVFARLGAGVCDGLVCTGAFFATLPDACSLVFVPSTTRFVRPIRQGVCPSGLGVTMYEMVR
Ga0318542_102810681	3300031668	Soil	MKRFASLLVLASVLAVTALSPALARHHRPHFVFARLGAGVCDGLVCTGAFFATLPDACSLVFVPSTTRFVRPIRQGVCPSGLGVT
Ga0318572_109810581	3300031681	Soil	VEGRAERKLEMKRFASLLVLASVLAVTALSPALARHHRPHFVFARLGAGVCDGLVCTGAFFATLPDACSLVFVPSTTRFVRPIRQGVCPSGLGVTMYEMVR
Ga0306917_102707642	3300031719	Soil	VKRFAMSIVLALASAVAVLSPAAAAHHRPHFVFARLGAGVCDALTCSGAFFATLPDACGAVVVPVTTRFVRPVRQMVCPSGLGVTMYRMVR
Ga0306917_105974311	3300031719	Soil	MKRFASSLVLASALAVTVLSPVLAARHHRPHFVFARLGAGVCDGLVCTGAFFATLPDACGLVFVPSTTRFVRPIRQGVCPSGLGVT
Ga0306917_108830511	3300031719	Soil	AMAMAMAMAVTALSPAAAAHYRPHYVFARLGAGVCDGLICSGAFFATLSDACGAVFVPVTTRYVVPVRQGACPSGLGVTLYRMVR
Ga0306917_115752941	3300031719	Soil	MKRFASLLVLASVLAVTALSPALARHHRPHFVFARLGAGVCDGLVCTGAFFATLPDACSLVFVPSTTRFVRPIRQGVCPSGLGVTMYEMVR
Ga0306918_102717551	3300031744	Soil	MKRFASSLVLASALAVTVLSPAVAARYRPHFVFARLGAGVCDGMVCSGAFFATLPDACGLVFVPSTTRFVRLVSQGVCPNGLGVAVYEMVR
Ga0306918_110478341	3300031744	Soil	MKRFASSLVLASALAVTVLSPAVAARHHRPHFVFARLGAGVCDGLVCTGAFFATLPDACGLVFVPSTTRFVRPVSQGVCPSVLRVTVYEMVR
Ga0318546_110704521	3300031771	Soil	MKGFASSLVLASVLAVTVLSPAVAARYRPHFVFARLGAGVCDGMVCSGAFFATLPDACGLGFVPSTTRFVRLVSQGVCPSGLGVAVYEMVR
Ga0318552_103165681	3300031782	Soil	MKRFASSLVLASVLAVTVLSPAVARYRPHFVFARLGAGVCDGMVCRGAFFATHPDACGLGFVPSTTRFVRLVNQGVCPSGLGVAVYEMVR
Ga0306919_106100141	3300031879	Soil	MKRFASSLVLASVLAVTVLSPAVATRYRPHFVFARLGAGVCDGMVCSGAFFATLPDACSLVFVPSTTRFVRLVSQGVCPSGLGVAVYEMVR
Ga0306919_108670092	3300031879	Soil	MKRFASSLVLASALAVTVLSPAVAARHHRPHFVFARLGAGVCDGLVCTGAFFATLPDACGLVFVPSTTRFVRPVSQGVCPSGLGVTVYEMVR
Ga0306919_108782891	3300031879	Soil	MKRFAVSMAMAMAMAVTALSPAAAAHYRPHYVFARLGAGVCDGLICSGAFFATLSDACGAVFVPVTTRYVVPVRQGACPSGLGVTLYRMVR
Ga0318544_101715421	3300031880	Soil	MKRFASSLVLASVLAVTVLSPAVAARYRPHFVFARLGAGVCDGMVCSGAFFATLPDACGLGFVPSTTRFVRLVSQGVCPSTPILKFESYQAALSSL
Ga0306925_110102872	3300031890	Soil	MKRFASSLVLASVLAVTALSPALARHHRPHFVFARLGAGVCDGLVCTGAFFATLPDACSLVFVPSTTRFVRPIRQ
Ga0306925_113039622	3300031890	Soil	MKRFASSLVLASALAVTVLSPVLAARHHRPHFVFARLGAGVCDGMVCSGAFFATLPDACSLVFVPSTTRFVRLVSQGVCPSGLGVAVYEMVR
Ga0318536_106305411	3300031893	Soil	MKGFASSLVLASVLAVTVLSPAVAARYRPHFVFARLGAGVCDGMVCSGAFFATLPDACGLGFVPSTTRFVRLVSQGVCPSTPILKFESYQAALSSL
Ga0318551_108523712	3300031896	Soil	FAASVVLALASAVTALSPAMAAHHRPHFVFARVGAGVCDGVIRSGVFFATLSDACGAVLVPMTTRFVRPVRQGVCPSGLGVTMYQMVR
Ga0306923_120949672	3300031910	Soil	MAMAMAVTALSPAAAAHYRPHYVFARLGAGVCDGLICSGAFFATLSDACGAVFVPVTTRYVVPVRQGACPSGLGVTLYRMVR
Ga0310912_112228571	3300031941	Soil	MKRFASSLVLASALAVTVLSPVLAARHHRPHFVFARLGAGVCDGMVCSGAFFATLPDACSLVFVPSTTRFVRLVSQGVCPNGLGVAVYEMVR
Ga0310916_111981641	3300031942	Soil	AIDDPYLHSPHCYMEMKRFASSLALAPALAVTALSPAEAYHHRPHLVFARLGAGVCDGLVCTGAFFATLPDACSLVFVPSTTRFVRPVRQGVCPSGLGVTMYEMVR
Ga0310916_116796021	3300031942	Soil	MKRFATLVVLALASAAAFSPAEARHRPHYVFARLGAGVCDGLTCTGAFFATPAEACGAVLVPSTTRFVRPVRSSACPSGLGVTMYRMVR
Ga0310913_111980581	3300031945	Soil	MKRFAVSVAMAMAMAVTALSPAAAAHYRPHYVFARLGAGVCDGLICSGAFFATLSDACGAVFVPVTTRYVVPVRQGACPSGLGVTLYRMVR
Ga0310910_112695491	3300031946	Soil	ERFDMKRFAVSVAMAMAMAVTALSPAAAAHYRPHYVFARLGAGVCDGLICSGAFFATLSDACGAVFVPVTTRYVVPVRQGACPSGLGVTLYRMVR
Ga0306926_101094292	3300031954	Soil	MKRFASSLVLASVLAVTVLSPAVAARYRPHFVFARLGAGVCDGMVCSGAFFATLPDACGLGFVPSTTRFVRLVSQGVCPSGLGVAV
Ga0306926_108217073	3300031954	Soil	MKRFASSLVLASALAVTVLSPVLAARHHRPHFVFARLGAGVCDGLVCTGAFFATLPDACGLVFVPSTTRFVRPVSQGVCPSGLGVTVYEMVR
Ga0318530_104253282	3300031959	Soil	MKRFASSLVLASVLAVTALSPALARHHRPHFVFARLGAGVCDGLVCTGAFFATLPDACSLVFVPSTTRFVRPIRQGVCP
Ga0318531_105219661	3300031981	Soil	VKRFAMSIVLALASAVAVFSPAAAAHHRPHFVFARLGAGVCDALTCSGAFFATLPDACGAVVVPVTTRFVRPVRQMVCPSGLG
Ga0306922_102625485	3300032001	Soil	MKRFASSLVLASALAVTVLSPAVAARYRPHFVFARLGAGVCDGMVCSGAFFATLPDACGLVFVPSTTRFVRPVRQGVCPSGLGVTVYEMVR
Ga0318545_102045461	3300032042	Soil	MKRFASSLVLASALAVTVLSPAVAARYRPHFVFARLGAGVCDGMVCSGAFFATLPDACGLGFVPSTTRFVRLVSQGVCPSGLGVAVYEMVR
Ga0318556_105866101	3300032043	Soil	MKRFASSLVLASALAVTVLSPAVAARYRPHFVFARLGAGVCDGMVCSGAFFATLPDACGLGFVPSTTRFVRLVTQGVCPSGLGVAVYEMVR
Ga0318504_103870702	3300032063	Soil	VFDVKRFAMSIVLALASAVAVFSPAAAAHHRPHFVFARLGAGVCDALTCSGAFFATLPDACGAVVVPVTTRFVRPVRQMVCPSGLGVTMYRMVR
Ga0306924_117831721	3300032076	Soil	MWREGSFNMKNFAVSVVLALASAVTALSPAMAAHHRPHFVFARLGAGVCDGVICSGAFFATLPDACGAVVVPVTTRYVRLVRQGVCPSGLGVSVYKMIR
Ga0318577_105670201	3300032091	Soil	MKRFASSLVLASVLAVTVLSPAVARYRPHFVFARLGAGVCDGMVCRGAFFATHPDACGLGFVPSTTRFVRLVSQGVCPNGLGVAVYEMVR
Ga0311301_116169141	3300032160	Peatlands Soil	MKRFASSLALASALAVTALSPAVAAHHRPHFVFARIGAGVCNGLVCTGAFFATLPAACGLVMVPSTTRFVRPVRHVVCPSGLGVTMYRMIR
Ga0306920_1043681181	3300032261	Soil	MKRFASSLVLASVLAVTVLSPAVAARYRPHFVFARLGAGVCDGMVCSGAFFATLPDACGLGFVPSTTRFVRLVSQGICPSGLGVAVYEMVR
Ga0348332_101470401	3300032515	Plant Litter	MKRFASSLALASALAVTALSPAQAYHHRPHFVFARLGAGVCDGLVCTGAFFATPADACGLVFVPSTTRFVRPVSRAVCPSGLGVTMYQMVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103673

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences