Metagenome / Metatranscriptome Family F103747

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F103747
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	68 residues
Representative Sequence	MEKRTKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQRKRKLFEVNPETYYTTIEPPGYRRE
Number of Associated Samples	79
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	47.00 %
% of genes near scaffold ends (potentially truncated)	17.82 %
% of genes from short scaffolds (< 2000 bps)	92.08 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (82.178 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (18.812 % of family members)
Environment Ontology (ENVO)	Unclassified (34.653 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (72.277 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.99% β-sheet: 2.06% Coil/Unstructured: 64.95%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF02586	SRAP	1.98
PF13340	DUF4096	0.99
PF04238	DUF420	0.99
PF03092	BT1	0.99
PF05532	CsbD	0.99
PF08734	GYD	0.99
PF13358	DDE_3	0.99
PF13419	HAD_2	0.99
PF07681	DoxX	0.99
PF02518	HATPase_c	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	1.98
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.99
COG2322	Cytochrome oxidase assembly protein CtaM/YozB, DUF420 family	Posttranslational modification, protein turnover, chaperones [O]	0.99
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.99
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.99
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.18 %
All Organisms	root	All Organisms	17.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.18 %
cellular organisms	root	All Organisms → cellular organisms	17.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.18 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	17.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.95 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.97 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.18 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.98 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.98 %
Abditibacteriota	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Abditibacteriota	0.99 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	0.99 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.18 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	1.98 %
unclassified Abditibacteriota	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Abditibacteriota → unclassified Abditibacteriota	0.99 %
Fimbriimonadia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia	0.99 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.99 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.99 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.99 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.18 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	1.98 %
Fimbriimonadales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales	0.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
Abditibacteriota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Abditibacteriota → unclassified Abditibacteriota → Abditibacteriota bacterium	0.99 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.99 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.99 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.18 %
Escherichia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	1.98 %
Fimbriimonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae	0.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
Abditibacteriota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Abditibacteriota → unclassified Abditibacteriota → Abditibacteriota bacterium	0.99 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.99 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.99 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.18 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1.98 %
Fimbriimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas	0.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
Abditibacteriota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Abditibacteriota → unclassified Abditibacteriota → Abditibacteriota bacterium	0.99 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.99 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.99 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.18 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1.98 %
Fimbriimonas ginsengisoli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas → Fimbriimonas ginsengisoli	0.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
Abditibacteriota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Abditibacteriota → unclassified Abditibacteriota → Abditibacteriota bacterium	0.99 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.99 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.99 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.18 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1.98 %
Fimbriimonas ginsengisoli Gsoil 348	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas → Fimbriimonas ginsengisoli → Fimbriimonas ginsengisoli Gsoil 348	0.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
Abditibacteriota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Abditibacteriota → unclassified Abditibacteriota → Abditibacteriota bacterium	0.99 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.99 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.99 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.99 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZ032L002I31IP	Not Available	526	Open in IMG/M
2170459012\|GOYVCMS01B06FR	Not Available	504	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100539932	Not Available	929	Open in IMG/M
3300002245\|JGIcombinedJ26739_100201847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1880	Open in IMG/M
3300002245\|JGIcombinedJ26739_100219112	Not Available	1795	Open in IMG/M
3300002245\|JGIcombinedJ26739_101198559	Not Available	648	Open in IMG/M
3300003219\|JGI26341J46601_10019473	All Organisms → cellular organisms → Bacteria	2226	Open in IMG/M
3300003219\|JGI26341J46601_10141435	Not Available	677	Open in IMG/M
3300003368\|JGI26340J50214_10023266	Not Available	1895	Open in IMG/M
3300004092\|Ga0062389_100744958	Not Available	1156	Open in IMG/M
3300004118\|Ga0058886_1331511	Not Available	503	Open in IMG/M
3300004471\|Ga0068965_1141812	Not Available	521	Open in IMG/M
3300004476\|Ga0068966_1250033	Not Available	826	Open in IMG/M
3300004631\|Ga0058899_10027120	Not Available	559	Open in IMG/M
3300004631\|Ga0058899_12096780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	523	Open in IMG/M
3300004635\|Ga0062388_100754429	Not Available	916	Open in IMG/M
3300005434\|Ga0070709_11186545	Not Available	613	Open in IMG/M
3300005436\|Ga0070713_100953110	Not Available	827	Open in IMG/M
3300005437\|Ga0070710_10213208	Not Available	1225	Open in IMG/M
3300005602\|Ga0070762_11119608	Not Available	543	Open in IMG/M
3300005921\|Ga0070766_10726784	Not Available	673	Open in IMG/M
3300005993\|Ga0080027_10032170	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1874	Open in IMG/M
3300005994\|Ga0066789_10127977	Not Available	1083	Open in IMG/M
3300006173\|Ga0070716_101203228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	609	Open in IMG/M
3300009525\|Ga0116220_10326052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Abditibacteriota → unclassified Abditibacteriota → Abditibacteriota bacterium	678	Open in IMG/M
3300009839\|Ga0116223_10263293	Not Available	1037	Open in IMG/M
3300010154\|Ga0127503_10020623	Not Available	867	Open in IMG/M
3300010343\|Ga0074044_10096617	Not Available	1990	Open in IMG/M
3300010379\|Ga0136449_100345626	All Organisms → cellular organisms → Bacteria	2677	Open in IMG/M
3300010379\|Ga0136449_100965690	Not Available	1377	Open in IMG/M
3300010859\|Ga0126352_1305410	Not Available	531	Open in IMG/M
3300011120\|Ga0150983_12949874	Not Available	608	Open in IMG/M
3300011120\|Ga0150983_14791316	Not Available	749	Open in IMG/M
3300011120\|Ga0150983_14857931	Not Available	995	Open in IMG/M
3300011120\|Ga0150983_15886388	Not Available	511	Open in IMG/M
3300011120\|Ga0150983_16624871	Not Available	519	Open in IMG/M
3300012181\|Ga0153922_1016058	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300012202\|Ga0137363_11639876	Not Available	535	Open in IMG/M
3300012362\|Ga0137361_10933403	Not Available	786	Open in IMG/M
3300012930\|Ga0137407_11087222	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	758	Open in IMG/M
3300020582\|Ga0210395_10147957	Not Available	1752	Open in IMG/M
3300020582\|Ga0210395_11315464	Not Available	529	Open in IMG/M
3300021046\|Ga0215015_10048086	Not Available	569	Open in IMG/M
3300021168\|Ga0210406_10257282	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300021168\|Ga0210406_10503324	Not Available	958	Open in IMG/M
3300021170\|Ga0210400_10865434	Not Available	739	Open in IMG/M
3300021178\|Ga0210408_10073534	Not Available	2675	Open in IMG/M
3300021180\|Ga0210396_11247977	Not Available	620	Open in IMG/M
3300021402\|Ga0210385_10354923	Not Available	1096	Open in IMG/M
3300021403\|Ga0210397_10705758	Not Available	776	Open in IMG/M
3300021405\|Ga0210387_10501509	Not Available	1079	Open in IMG/M
3300021405\|Ga0210387_10796707	Not Available	835	Open in IMG/M
3300021405\|Ga0210387_11631289	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300021432\|Ga0210384_11530042	Not Available	573	Open in IMG/M
3300021475\|Ga0210392_10687227	Not Available	762	Open in IMG/M
3300021479\|Ga0210410_10446008	Not Available	1158	Open in IMG/M
3300024288\|Ga0179589_10434873	Not Available	604	Open in IMG/M
3300025898\|Ga0207692_10613948	Not Available	700	Open in IMG/M
3300025939\|Ga0207665_10211474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1417	Open in IMG/M
3300026281\|Ga0209863_10070054	Not Available	1036	Open in IMG/M
3300026551\|Ga0209648_10536336	Not Available	660	Open in IMG/M
3300027548\|Ga0209523_1123598	Not Available	534	Open in IMG/M
3300027565\|Ga0209219_1144965	Not Available	573	Open in IMG/M
3300027651\|Ga0209217_1184578	Not Available	566	Open in IMG/M
3300027663\|Ga0208990_1202621	Not Available	503	Open in IMG/M
3300027674\|Ga0209118_1092479	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300027698\|Ga0209446_1122681	Not Available	670	Open in IMG/M
3300027727\|Ga0209328_10067003	Not Available	1099	Open in IMG/M
3300027783\|Ga0209448_10258527	Not Available	574	Open in IMG/M
3300027812\|Ga0209656_10041228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas → Fimbriimonas ginsengisoli → Fimbriimonas ginsengisoli Gsoil 348	2668	Open in IMG/M
3300027812\|Ga0209656_10047484	Not Available	2447	Open in IMG/M
3300027812\|Ga0209656_10248249	Not Available	842	Open in IMG/M
3300027825\|Ga0209039_10042853	Not Available	2098	Open in IMG/M
3300027889\|Ga0209380_10315567	Not Available	918	Open in IMG/M
3300027895\|Ga0209624_10431192	Not Available	879	Open in IMG/M
3300028536\|Ga0137415_10799358	Not Available	754	Open in IMG/M
3300028906\|Ga0308309_10722080	Not Available	866	Open in IMG/M
3300029910\|Ga0311369_11417929	Not Available	525	Open in IMG/M
3300029944\|Ga0311352_11342296	Not Available	539	Open in IMG/M
3300029999\|Ga0311339_10674912	Not Available	1015	Open in IMG/M
3300029999\|Ga0311339_10940135	Not Available	816	Open in IMG/M
3300030531\|Ga0210274_1841691	Not Available	622	Open in IMG/M
3300030618\|Ga0311354_11482827	Not Available	601	Open in IMG/M
3300030748\|Ga0074043_11351641	Not Available	511	Open in IMG/M
3300030950\|Ga0074034_11276558	Not Available	523	Open in IMG/M
3300031049\|Ga0074036_11187887	Not Available	507	Open in IMG/M
3300031057\|Ga0170834_101826624	Not Available	895	Open in IMG/M
3300031236\|Ga0302324_102908975	Not Available	573	Open in IMG/M
3300031469\|Ga0170819_14764926	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1038	Open in IMG/M
3300031525\|Ga0302326_13078695	Not Available	567	Open in IMG/M
3300031708\|Ga0310686_105560893	All Organisms → cellular organisms → Bacteria	1874	Open in IMG/M
3300031708\|Ga0310686_106014713	Not Available	706	Open in IMG/M
3300031962\|Ga0307479_11030710	Not Available	791	Open in IMG/M
3300032160\|Ga0311301_10119077	All Organisms → cellular organisms → Bacteria	4993	Open in IMG/M
3300032160\|Ga0311301_10554791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	1678	Open in IMG/M
3300032756\|Ga0315742_11439847	Not Available	731	Open in IMG/M
3300032756\|Ga0315742_11732819	Not Available	682	Open in IMG/M
3300032756\|Ga0315742_12308429	Not Available	609	Open in IMG/M
3300032756\|Ga0315742_12515527	Not Available	587	Open in IMG/M
3300032756\|Ga0315742_12876412	Not Available	554	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.01%
Host-Associated	Host-Associated	0.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.13%
Aquatic	Environmental → Aquatic	11.88%
Fungi	Host-Associated → Fungi	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.20%
Freshwater	Environmental → Aquatic → Freshwater	11.88%
Peat	Environmental → Terrestrial → Peat	6.93%
Mycelium	Host-Associated → Fungi → Mycelium	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.52%
Loam	Environmental → Terrestrial → Soil → Loam	28.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.99%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	22.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.99%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	18.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	10.89%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	6.93%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.95%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.97%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.98%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.98%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.99%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.99%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.99%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.99%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459012	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grass	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004118	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF208 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004471	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 57 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004476	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010859	Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030531	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO038SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030748	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Litter C3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030950	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Mineral N3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031049	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Mineral C2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_00370690	2170459003	Grass Soil	PVTRERLLGAFEDMDYEQLQPWLSELQRTRNLFEVNPETYYTTVEPSGHRQE
N56_05181560	2170459012	Grass Soil	MAKRTKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQRSLSELQRTRKLFEVNPETYYTTIEPPGYRRE
INPhiseqgaiiFebDRAFT_1005399321	3300000364	Soil	MKKAHTKAEIVAWIELRQPVTRGKLLGAFEDMDYEQLQGWLSELQLKRELFEVNPETYYTTVEERK*
JGIcombinedJ26739_1002018471	3300002245	Forest Soil	MEKRTKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQRKRKLFEVNPET
JGIcombinedJ26739_1002191123	3300002245	Forest Soil	MKRRTKAELLAWVEQHQPVTREKLLDAFEDMDYEQLQQWLSELQLKRKLFEINPETYYTTIEPPECRRG*
JGIcombinedJ26739_1011985591	3300002245	Forest Soil	SESQSMEKPKEKRRTKAQLLAWIEQHQPVTREKLLSAFEDMDYEQLQGWLSELQRKRRLFEVNPETYYTTVEPSE*
JGI26341J46601_100194733	3300003219	Bog Forest Soil	MKIRTKAELLAWIEQHQPVTRGKLLDAFEDMDYEQLQRXLSELQLKRKLFEINPETYYTTIEPPEYRR*
JGI26341J46601_101414351	3300003219	Bog Forest Soil	VAELLAWIEQHQPVTRGKLLDAFEDMDYEQLQRSLSELQLKRKLFEINPETYYTTIEPPEYRR*
JGI26340J50214_100232663	3300003368	Bog Forest Soil	MKIRTKAELLAWIEQHQPVTRGKLLDAFEDMDYEQLQRWLSELQLKRKLFEINPETYYTTIEPPEYRR*
Ga0062389_1007449581	3300004092	Bog Forest Soil	MKTRTKAELVAWVEQHQPVTRGKLLRAFEDMDYEQLQGWLSELQSKRSLFEVNPETYYTTMEERD*
Ga0058886_13315111	3300004118	Forest Soil	MEKRTKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQRKRKLFEVNPETYYTTIEPHGYRRE*
Ga0068965_11418122	3300004471	Peatlands Soil	MKSRTKAELLVWIEQHQPVTREKLLGAFEDVDYEELQGWLSELQRERRLFEVNPEIYYTTIEPPEYRRG*
Ga0068966_12500332	3300004476	Peatlands Soil	MKSRTKAELLVWIEQHQPVTREKLLGAFEDVDYEELQGWLSELQRERRLFEVNPETYYTTIEPPEYRRG*
Ga0058899_100271202	3300004631	Forest Soil	MKRRTKVELLAWIKQHQPVTRGKLLGAFQDMDYERLQGWLSELQRKRRLFEVNPETYYTTIQKRD*
Ga0058899_120967801	3300004631	Forest Soil	MEKRTKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQRTRKLFEVNPETYYTTIEPPGYRRE*
Ga0062388_1007544292	3300004635	Bog Forest Soil	MGKPTKVVKRRTKVQLLAWVEQHQPVTREKLLGAFEDMDYEQLQRWLSELQRKRNLFEVNPETYYTTVEPSEHRRG*
Ga0070709_111865451	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MCTKVELLAWVEQHQPVTRGKLLGAFEDMDYEQLQRWLSELQRKRNLFEVNPETYYTTVEPSEHRRG*
Ga0070713_1009531102	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MEKRTKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQRKRKLFEVNPETYYTTIEPPGYRCE*
Ga0070710_102132082	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKMRTKIELLAWVEQHQPVTRGKLLGAFEDMDYEQLQRWLSELQRKRNLFEVNPETYYTTVEPSEHRRG*
Ga0070762_111196081	3300005602	Soil	MKRRTKAELLAWIEQHQPVTRGKLLDAFEDMDYEQLQRWLSELQLKRKLFEINPETYYTTIEPPEYRR*
Ga0070766_107267842	3300005921	Soil	MEKRTKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQRKRKLFEVNPETYYTTIEPRVSTRIDDQKECIGRII*
Ga0080027_100321703	3300005993	Prmafrost Soil	MEKRTKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQRKRKLFEVNPETYYTTIDPPEYRLE*
Ga0066789_101279772	3300005994	Soil	MEKRTKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQRKRKLFEVNPETYYTTIEPPEYRLE*
Ga0070716_1012032281	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MEKRTKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQRKRKLFEVNPETYYTTIEPPGYRRE*
Ga0116220_103260522	3300009525	Peatlands Soil	MLAQSWKSQERMNRRNKTELLAWIEQHQPVTREKLLDAFEDMDYEQLQRWLSELQLKRKLFEINPETYYTTIEPPEYRR*
Ga0116223_102632931	3300009839	Peatlands Soil	MKSRTKAELLVWIEQHQPVTREKLLGAFEDVDYEELQGWLSELQRKRKLFEVNPETYYTTIEPPEYRRG*
Ga0127503_100206232	3300010154	Soil	MKRRTKAELLAWIEQHQPVTREKLLDAFEDMDYERLQRWLSEFQRKRKLFEINPETYYTTIEPPEYRRG*
Ga0074044_100966171	3300010343	Bog Forest Soil	MKIRTKAELLAWIEQHQPVTRGKLLDAFEDMDYEQLQRWLSVLQLKRKLFEINPETYYTTIEPPEYRR*
Ga0136449_1003456264	3300010379	Peatlands Soil	MEKRTKAELLAWIEQHQPVTREKLLGTFEDMDYEQLQGWLSELQRKRKLFEVNPETYYTTIEPPRYRRE*
Ga0136449_1009656901	3300010379	Peatlands Soil	MKRRTKAELLAWIEQHQPVTREKLLDAFEDMDYEQLQRWLSELQLKRKLFEINPETYYTTIEPPEYRR*
Ga0126352_13054102	3300010859	Boreal Forest Soil	MEKRTKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQRTRKLFEVNPETYYTTIEPPAYRRE*
Ga0150983_129498742	3300011120	Forest Soil	MKMHTKLELLAWVEQHQPVTRERLLGAFEDMDYEQLQRWLSELQRTRNLFEVNPETYYTTVEPSGHRQE*
Ga0150983_147913161	3300011120	Forest Soil	LLAWIEQHQPVTREKLLGAFADMDYEQLQGWLSELQRKHKLFEVNPETYYTTIEPPGYRRE*
Ga0150983_148579312	3300011120	Forest Soil	MKRRTKAELLAWIEQHQPVTREKLLDAFEDMDYEHLQRWLSELQLKRKLFEINPETYYTTIEPPEYRR*
Ga0150983_158863881	3300011120	Forest Soil	MNKQRKNEKTHTKAEIVTWIELRQPVTRGKLLGAFEDMDYEQLQGWLSELQLKRKLFEVNPETYYATNEERN*
Ga0150983_166248711	3300011120	Forest Soil	MKRRTKVELLAWIEQHQPVTREKLLAAFEDMDYEQLQGWLSELQRKRRLFEVNPETYYTTIEPPEYRRG*
Ga0153922_10160581	3300012181	Attine Ant Fungus Gardens	MASRTKAELLAWIEQHQPVTRGRLLDAFSDVDYEQLQGWLSELQLKRELFEVNPETYYTTIEPPEYRRG*
Ga0137363_116398761	3300012202	Vadose Zone Soil	MKRRTKAELLAWIEQHQPVTREKLLDAFEDMDYEQLQHWLSELQLKRRLFEINSETYYTTIEPPECRRR*
Ga0137361_109334032	3300012362	Vadose Zone Soil	MEKRTTAELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQRKRKLFEVNPETYYTTIEPPGYRRE*
Ga0137407_110872222	3300012930	Vadose Zone Soil	AELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQRKRKLFEVNPETYYTTIEPPGYRRE*
Ga0210395_101479572	3300020582	Soil	VTDALAKSQAWEDQPRMKRHTKLELLAWVEQHQPVTRERLLGAFEDMDYEQLQRWLSELQRTRSLFEVNPETYYTTVEPSGHRQG
Ga0210395_113154642	3300020582	Soil	WVEQNQPVTREKLLGAFEDMDYEQLQRWLSELQRKRNLFEVNPETYYTTLEPSEHPRG
Ga0215015_100480861	3300021046	Soil	MEMPRKNERHTKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQSWLSELQRKRKLFEINPETYYTTIEPPEYRRG
Ga0210406_102572823	3300021168	Soil	MGKLTKVVKRHTKIQLLAWVEQHQPVTREKLLGAFEDMDYEQLQRWLSELQRKRNLFEVNPETYYTTVEPSEHRRG
Ga0210406_105033241	3300021168	Soil	MKMHTKLELLAWVEQHQPVTRERLLGAFEDMDYEQLQRWLSELQRTRNLFEVNPETYYTTVEPSEHRRG
Ga0210400_108654341	3300021170	Soil	MEKRTKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQRKRKLFEVNPETYYTTIEPPRYRRE
Ga0210408_100735344	3300021178	Soil	MKRRTKAELLAWIEQHQPVTREKLLDAFEDMDYEQLQRWLSELQLKRKLFEINPETYYTTIEPPEYRR
Ga0210396_112479771	3300021180	Soil	LLAWVEQNQPVTREKLLGAFEDMDYEQLQRWLSELQRKRNLFEVNPETYYTTLEPSEHPR
Ga0210385_103549231	3300021402	Soil	VTDALAKSQAWEDQPRMKRHTKLELLAWVEQHQPVTRERLLGAFEDMDYEQLQGWLSELQLKRKLFEVNPETYYTTIEERK
Ga0210397_107057582	3300021403	Soil	MKRHTKLELLAWVEQHQPVTRERLLGAFEDMDYEQLQRWLSELQRTRSLFEVNPETYYTTVEPSGHRQG
Ga0210387_105015092	3300021405	Soil	MKMHTKLELLAWVEQHQPVTRERLLGAFEDMDYEQLQRWLSELQRTRNLFEVNPETYYTTVEPSGHRQE
Ga0210387_107967071	3300021405	Soil	VKRRTKVQLLAWVEQHQPVTREKLLGAFEDMDYEQLQRWLSELQRKRNLFEVNPETYYTTVEPSEHRRG
Ga0210387_116312892	3300021405	Soil	MAKRTKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQRWLSELQRTRKLFEVNPETY
Ga0210384_115300422	3300021432	Soil	KQRKDEKMHTKAEIVARIELRQPITRGKLLGAFGDMDYEQFQGWLSELQLKRKLFEVNPETYYATIEERN
Ga0210392_106872271	3300021475	Soil	MKRHTKLELLAWVEQHQPVTRERLLGAFEDMDYEQLQRWLSELQRTRNLFEVNPETYYTTVEPSGHRQE
Ga0210410_104460082	3300021479	Soil	MEKRTKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQRKRKLFEVNPETYYTTIEPPGIDANRRPEGMHAP
Ga0179589_104348731	3300024288	Vadose Zone Soil	MEKRTTAELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQRKRKLFEVNPETYYTT
Ga0207692_106139481	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRTKIELLAWVEQHQPVTRGKLLGAFEDMDYEQLQRWLSELQRKRNLFEVNPETYYTTVEPSEHRRG
Ga0207665_102114741	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LAGIEHHEPVTREKLLGAFEDMDYEQLQGWLSELQRKRKLFEVNPETYYTTIEPPGYRRE
Ga0209863_100700541	3300026281	Prmafrost Soil	MEKRTKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQRKRKLFEVNPETYYTTIDPPEYRLE
Ga0209648_105363362	3300026551	Grasslands Soil	MKRHTKAELLAWIQQHQPVTREKLLGAFEDMDYEQLQSWLSELQRKRRLFEINPETYYTTIEPPQYRRG
Ga0209523_11235981	3300027548	Forest Soil	MASRTKAELLAWIEQHQPVTRGRLLDAFSDVDYEQLQDWLSELQLKRELFEVNPETYYTTIEPPEYRRG
Ga0209219_11449652	3300027565	Forest Soil	MEKRTKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQRKRKLFEVNPETYYTTIEPPEYRLE
Ga0209217_11845781	3300027651	Forest Soil	RRTKAELLAWITEHQPVTREKLLDAFKDMDYEQLQRWLSEFQRKRRLFEVNPETYYSTIEPPEYRRESE
Ga0208990_12026211	3300027663	Forest Soil	NGERMKRRTKAELLVWIEQHQPVTREKLLGAFEDMDYEQLQGWLSDLQRKRRLFEVNPETYYTTIEPPEYQRG
Ga0209118_10924792	3300027674	Forest Soil	MEKRTKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQSTHRLFEVNPETYYTTIEPPEYRRG
Ga0209446_11226812	3300027698	Bog Forest Soil	VAELLAWIEQHQPVTRGKLLDAFEDMDYEQLQRWLSELQRKRNLFEVNPETYYTTVEPSEHRRG
Ga0209328_100670031	3300027727	Forest Soil	MRSESQSMEKPKEKRRTKAQLLAWIEQHQPVTREKLLSAFEDMDYEQLQGWLSELQRKRRLFEVNPETYYTTVEPSE
Ga0209448_102585271	3300027783	Bog Forest Soil	MKRHTKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQSWLSELQRKRKLFEINPETYYTTIEPPEYRRG
Ga0209656_100412285	3300027812	Bog Forest Soil	MKIRTKAELLAWIEQHQPVTRGKLLDAFEDMDYEQLQRWLSELQLKRKLFEINPETYYTTIEPPEYRR
Ga0209656_100474841	3300027812	Bog Forest Soil	VAELLAWIEQHQPVTRGKLLDAFEDMDYEQLQRSLSELQLKRKLFEINPETYYTTIEPPEYRR
Ga0209656_102482491	3300027812	Bog Forest Soil	MKRRTKAELLAWIEQHQPVTREKLLDAFEDMDYEQLQRWLSDLQLKRKLFEINPETYYTTIEPPEYRR
Ga0209039_100428531	3300027825	Bog Forest Soil	MKIRTKAELLAWIEQHQPVTRGKLLDAFEDMDYEQLQRSLSELQLKRKLFEINPETYYTTIEPPEYRR
Ga0209380_103155671	3300027889	Soil	MEKRTKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQRKRKLFEVNPETYYTTIEPRVSTRIDDQKECIGRII
Ga0209624_104311922	3300027895	Forest Soil	MKKGTKAELLAWIEQHQPVTREKLLGAFEDVDYEHLQGWLSELQRTRKLFEVNPETYYTTVEPPGYQRE
Ga0209526_103819461	3300028047	Forest Soil	MRSESQSMEKPKEKRRTKAQLLAWIEQHQPVTREKLLSAFEDMDYEQLQGWLSELQRKRRLFE
Ga0137415_107993581	3300028536	Vadose Zone Soil	MEKRTTAELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQRKRKLFEVNPETYYTTIEPPGYRRE
Ga0308309_107220803	3300028906	Soil	MNTQRKNEKTHPKVEIVAWIELRRPVIRGKLLGAFEDMDCEQLQCWLSEVQLKRKLFEVDSETYYTTIEERK
Ga0311369_114179292	3300029910	Palsa	KSSSMNKQRNNEKKHTMAEIVAWIEVRQPVTRGKLLGAFEDMDYEQLQGWLSELQLKRKLFEVNPETYYTTIEE
Ga0311352_113422961	3300029944	Palsa	MNKQRNNEKKHTMAEIVAWIEVRQPVTRGKLLGAFEDMDYEQLQGWLSELQLKRKLFEVNPETYYTTIEE
Ga0311339_106749123	3300029999	Palsa	MAEIVAWIEVRQPVTRGKLLGAFEDMDYEQLQGWLSELQLKRKLFEVNPETYYTTIEE
Ga0311339_109401352	3300029999	Palsa	MKNRTKAELVAWIEQHQPVTRGKLLGAFEDMDYEQLQGWLSELQRKRRLFEVNPETYYTTIEERDE
Ga0210274_18416912	3300030531	Soil	MEKPRENERRTKTELLAWIEQHQPVTREKLLDAFEDMDYEQLQGWLSELQSTHRLFEVNPETYYTTIEPTEYRRG
Ga0311354_114828271	3300030618	Palsa	VAWIEQHQPVTRGKLLGAFEDMDYEQLQGWLSELQRKRRLFEVNPETYYTTIEERDE
Ga0074043_113516412	3300030748	Soil	MEKRTKKELLAWIEKHQPVTREKLLGTFEDVDYEHLQGWLNELQRTRKLFEVNPETYYTTIEPPGYRRE
Ga0074034_112765582	3300030950	Soil	MEKRTKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQRTRKLFEVNPETYYTTIEPPGYRRE
Ga0074036_111878871	3300031049	Soil	MEKRIKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQRTRKLFEVNPETYYTTIEPPGYRRE
Ga0170834_1018266241	3300031057	Forest Soil	MKRRTKAELLAWIEQHQPVTREKLLDAFEDMDYEHLQRWLSELQLKRKLFEINPETYYTTIEPPEYRR
Ga0302324_1029089752	3300031236	Palsa	MNKQRNNEKKHTMAEIVAWIEVRQPVTRGKLLGAFEDMDYEQLQGWLSELQRKRSLFEVNPETYYTTIEERDE
Ga0170819_147649262	3300031469	Forest Soil	MKRHTKVELLAWVEQHQPVTSERLLGAFEDMDYEQLQRWLSELQRKRNLFEVNPETYYTTVEPSEHRRG
Ga0302326_130786952	3300031525	Palsa	AAFHKHRSKSSSMNKQRNNEKKHTMAEIVAWIEVRQPVTRGKLLGAFEDMDYEQLQGWLSELQLKRKLFEVNPETYYTTIEE
Ga0310686_1055608932	3300031708	Soil	MKRRTKAELVAWIEQHQPVTRGKLLRAFEDMDYEQLQGWLSELQSKRSLFEVNPETYYTTIEERD
Ga0310686_1060147131	3300031708	Soil	MKRRTKAELQAWIEQHQPVTRGKLLDAFEDMDYEQLQRWLSELQLKRKLFEINPETYYTTIEPPEYRR
Ga0307479_110307101	3300031962	Hardwood Forest Soil	MASRTKAELLAWIEQHQPVTRGRLLDAFGDVDYEQLQGWLSELQLKRELFEVNPETYYTTIEPP
Ga0311301_101190775	3300032160	Peatlands Soil	MKSRTKAELLVWIEQHQPVTREKLLGAFEDVDYEELQGWLSELQRERRLFEVNPETYYTTIEPPEYRRG
Ga0311301_105547912	3300032160	Peatlands Soil	MEKRTKAELLAWIEQHQPVTREKLLGTFEDMDYEQLQGWLSELQRKRKLFEVNPETYYTTIEPPRYRRE
Ga0315742_114398471	3300032756	Forest Soil	MEKRTKKELLAWIEQHQPVTREKLLGTFEDVDYEHLQGWLNELQRTRKLFEVNPETYYTTIEPPGYRRE
Ga0315742_117328192	3300032756	Forest Soil	MKRHTKAELLAWIEQHQPVTRGKLLGAFEDMDYEQLQGWLSELQRKRRIFEVNPETYYTTIGERV
Ga0315742_123084291	3300032756	Forest Soil	MNKQRKNEKMHTKAEILAWIELRQPVSRGKLLGAFEDMDYEQLQGWLSELQLKRKLFEVNPETYYTTIEERK
Ga0315742_125155271	3300032756	Forest Soil	QPVTRERLLGAFEDMDYEQLQRWLSELQRTRNLFEVNPETYYTTVEPSGHRQG
Ga0315742_128764122	3300032756	Forest Soil	MKKGTKAELLAWIEQHQPVTREKLLGAFEDMDYEQLQGWLSELQRKRKLFEVNPETYYTTIEPSGYRRPEGMHAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103747

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences