Metagenome / Metatranscriptome Family F103752

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103752
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	133 residues
Representative Sequence	VVEDPKWELAILATVQGFYEKLLQDSIGGEVPVPAGLEAISLQEGDGEVHATLERMRRWLRLLDQAITPAMLRRAFTAETDPEIAEAVLRYFTRKKDTDDVNRDKTDLVATFLYRHPRVPGQWERRGYGLD
Number of Associated Samples	88
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	92.08 %
% of genes near scaffold ends (potentially truncated)	99.01 %
% of genes from short scaffolds (< 2000 bps)	90.10 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.81

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (8.911 % of family members)
Environment Ontology (ENVO)	Unclassified (24.752 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.505 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.46% β-sheet: 0.00% Coil/Unstructured: 46.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.81
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.81
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
e.18.1.1: Nickel-iron hydrogenase, large subunit	d6z8mb_	6z8m	0.55315
a.29.7.1: Mob1/phocein	d1pi1a1	1pi1	0.53812
c.1.9.0: automated matches	d3rysa_	3rys	0.53747
e.26.1.2: Carbon monoxide dehydrogenase	d2yivx_	2yiv	0.52942
e.5.1.1: Heme-dependent catalases	d3ttva1	3ttv	0.52102

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF01593	Amino_oxidase	4.95
PF00551	Formyl_trans_N	4.95
PF02678	Pirin	2.97
PF05726	Pirin_C	1.98
PF01266	DAO	1.98
PF12706	Lactamase_B_2	1.98
PF13450	NAD_binding_8	1.98
PF00291	PALP	0.99
PF00155	Aminotran_1_2	0.99
PF08669	GCV_T_C	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	4.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	68.32 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	54.46 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	11.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	54.46 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	11.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	54.46 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11.88 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	54.46 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	11.88 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	54.46 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.96 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	54.46 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.96 %
Rhizobium leucaenae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leucaenae	0.99 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0362111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	689	Open in IMG/M
3300004081\|Ga0063454_100578968	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	814	Open in IMG/M
3300004091\|Ga0062387_101010838	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	638	Open in IMG/M
3300005180\|Ga0066685_10815246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	631	Open in IMG/M
3300005355\|Ga0070671_100758335	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	844	Open in IMG/M
3300005355\|Ga0070671_101391712	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	620	Open in IMG/M
3300005355\|Ga0070671_101666748	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	566	Open in IMG/M
3300005366\|Ga0070659_100700873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	875	Open in IMG/M
3300005540\|Ga0066697_10326776	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	897	Open in IMG/M
3300005561\|Ga0066699_11126123	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	540	Open in IMG/M
3300005587\|Ga0066654_10902891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	507	Open in IMG/M
3300005719\|Ga0068861_100217512	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1613	Open in IMG/M
3300005840\|Ga0068870_10430760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	865	Open in IMG/M
3300006050\|Ga0075028_100710465	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300006059\|Ga0075017_100255875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1282	Open in IMG/M
3300006173\|Ga0070716_101005055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	660	Open in IMG/M
3300006354\|Ga0075021_10918142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	569	Open in IMG/M
3300006871\|Ga0075434_101601828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leucaenae	660	Open in IMG/M
3300006903\|Ga0075426_11145379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	589	Open in IMG/M
3300006954\|Ga0079219_10226305	All Organisms → cellular organisms → Bacteria → Acidobacteria	1087	Open in IMG/M
3300006954\|Ga0079219_12509929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	501	Open in IMG/M
3300007076\|Ga0075435_100805758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	818	Open in IMG/M
3300009038\|Ga0099829_10546403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	963	Open in IMG/M
3300009147\|Ga0114129_11435856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	850	Open in IMG/M
3300009162\|Ga0075423_12540035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	559	Open in IMG/M
3300009177\|Ga0105248_11669172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	722	Open in IMG/M
3300010303\|Ga0134082_10485110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	537	Open in IMG/M
3300010329\|Ga0134111_10505755	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300010336\|Ga0134071_10078455	All Organisms → cellular organisms → Bacteria	1543	Open in IMG/M
3300010362\|Ga0126377_10341028	All Organisms → cellular organisms → Bacteria	1492	Open in IMG/M
3300010362\|Ga0126377_11577866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	731	Open in IMG/M
3300010399\|Ga0134127_12741923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	572	Open in IMG/M
3300010401\|Ga0134121_11468431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	695	Open in IMG/M
3300011269\|Ga0137392_11045936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	670	Open in IMG/M
3300012096\|Ga0137389_10016743	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5057	Open in IMG/M
3300012189\|Ga0137388_10011221	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6348	Open in IMG/M
3300012205\|Ga0137362_10118610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	2242	Open in IMG/M
3300012469\|Ga0150984_109886051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	514	Open in IMG/M
3300012917\|Ga0137395_10815813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	676	Open in IMG/M
3300012960\|Ga0164301_10153960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1410	Open in IMG/M
3300012961\|Ga0164302_10448035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	896	Open in IMG/M
3300012972\|Ga0134077_10020803	All Organisms → cellular organisms → Bacteria	2251	Open in IMG/M
3300012975\|Ga0134110_10296192	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300012987\|Ga0164307_10248874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1239	Open in IMG/M
3300012987\|Ga0164307_10417676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	993	Open in IMG/M
3300012989\|Ga0164305_11500045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	598	Open in IMG/M
3300013297\|Ga0157378_10821378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	956	Open in IMG/M
3300014657\|Ga0181522_10152861	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300014969\|Ga0157376_10094683	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2596	Open in IMG/M
3300014969\|Ga0157376_12217539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	588	Open in IMG/M
3300016422\|Ga0182039_11855716	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300017656\|Ga0134112_10146768	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300017822\|Ga0187802_10082533	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300017823\|Ga0187818_10191888	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300017959\|Ga0187779_10733374	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300017970\|Ga0187783_10090441	All Organisms → cellular organisms → Bacteria → Acidobacteria	2255	Open in IMG/M
3300018001\|Ga0187815_10460136	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300018006\|Ga0187804_10151218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	978	Open in IMG/M
3300018058\|Ga0187766_11440049	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300018062\|Ga0187784_10817757	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300018085\|Ga0187772_10621073	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300018090\|Ga0187770_10507104	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300018090\|Ga0187770_10627759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	855	Open in IMG/M
3300018090\|Ga0187770_10667910	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300018090\|Ga0187770_11769358	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300019268\|Ga0181514_1586078	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300020001\|Ga0193731_1008396	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2639	Open in IMG/M
3300020006\|Ga0193735_1131245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	671	Open in IMG/M
3300020580\|Ga0210403_11493340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	509	Open in IMG/M
3300021170\|Ga0210400_10824495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	760	Open in IMG/M
3300021180\|Ga0210396_10356430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1290	Open in IMG/M
3300021432\|Ga0210384_10266979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1540	Open in IMG/M
3300021432\|Ga0210384_11301314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	632	Open in IMG/M
3300021478\|Ga0210402_10715335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	925	Open in IMG/M
3300025906\|Ga0207699_11312189	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	535	Open in IMG/M
3300025906\|Ga0207699_11456347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	507	Open in IMG/M
3300026089\|Ga0207648_11823361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	570	Open in IMG/M
3300026547\|Ga0209156_10184367	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300027535\|Ga0209734_1055979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	746	Open in IMG/M
3300027537\|Ga0209419_1105576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	561	Open in IMG/M
3300027727\|Ga0209328_10225613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	562	Open in IMG/M
3300027867\|Ga0209167_10087612	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300027875\|Ga0209283_10240122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1202	Open in IMG/M
3300027894\|Ga0209068_10706081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	591	Open in IMG/M
3300028566\|Ga0302147_10335106	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300028673\|Ga0257175_1016330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1190	Open in IMG/M
3300028766\|Ga0302269_1115097	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300028866\|Ga0302278_10466525	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300029939\|Ga0311328_11082890	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300030002\|Ga0311350_10210381	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300030014\|Ga0302175_10147876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	554	Open in IMG/M
3300031474\|Ga0170818_114887791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	553	Open in IMG/M
3300031716\|Ga0310813_10196684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1650	Open in IMG/M
3300031996\|Ga0308176_10031405	All Organisms → cellular organisms → Bacteria	4146	Open in IMG/M
3300032205\|Ga0307472_100080650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	2164	Open in IMG/M
3300032205\|Ga0307472_100145015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1724	Open in IMG/M
3300032782\|Ga0335082_10128716	All Organisms → cellular organisms → Bacteria → Proteobacteria	2477	Open in IMG/M
3300032828\|Ga0335080_11262263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	740	Open in IMG/M
3300032893\|Ga0335069_11182464	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300032893\|Ga0335069_11882673	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300034195\|Ga0370501_0177330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	746	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.18%
Host-Associated	Host-Associated	16.83%
Engineered	Engineered	0.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.29%
Plants	Host-Associated → Plants	16.83%
Aquatic	Environmental → Aquatic	10.89%
Solid Waste	Engineered → Solid Waste	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.86%
Freshwater	Environmental → Aquatic → Freshwater	6.93%
Peat	Environmental → Terrestrial → Peat	5.94%
Sediment	Environmental → Aquatic → Sediment	3.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.97%
Grass	Engineered → Solid Waste → Grass	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.91%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.93%
Loam	Environmental → Terrestrial → Soil → Loam	6.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.97%
Composting	Engineered → Solid Waste → Grass → Composting	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.95%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.98%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.99%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.99%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.99%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	8.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.95%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.95%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.96%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.98%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.99%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.99%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.99%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.99%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.99%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028766	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_2	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030014	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_3	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_03621112	3300000156	Sugar Cane Bagasse Incubating Bioreactor	VAEDPKWELAILATVQGFYEKLLQDSVEGEVPIPSGLETVSLQSDDSDVNQTLTRMRRWLRLLDMAITPAMLRRALTPDTDPEIAEALLRYFSKKKDIGAVTRDKTDLVATFLYSHPRVPGQWERRGFGLDGD
Ga0063454_1005789681	3300004081	Soil	VVEDPKWELAILATVQGFYEKLLQDSIGGEVPVPAGLEAVSLQEGDGEVHATLDRMRRWLRLLDHAITPAMLRRAFTSETDPEIAEAVLRYFTRKKDPSDINRDKTDLVATFLYRHPRVPGQWERRGYGLDGSLPLSPFEIA
Ga0062387_1010108381	3300004091	Bog Forest Soil	VVEDPKWELAILATVQGFYEKLLQDSIGGEVPVPAGLEAISLQEGDGEVHATLDRMRRWLRLLDQAITPAMLRRAFTADTDPEIAEAVLRYFTRKKDTSDVNRDKTDLVATFLYRHPRVPGQ
Ga0066685_108152461	3300005180	Soil	VQGFYEKLLQEPVGGEVPVPAGLEAISLQEGDGEVHATLDKMRRWLRLLDQAITPAMLRRAFTSEIDPEIAEAVLLYYTRKKDTSDVNRDKTDLVATFLYRHPRVPGQWERRG
Ga0070671_1007583351	3300005355	Switchgrass Rhizosphere	VVEDPKWELAILATVQGFYEKLLQDSIGGEVPVPAGLEAVSLQEGDGEVHATLDRMRRWLRLLDHAITPAMLRRAFTSETDPEIAEAVLRYFTRKKDTSDINRDKTDLVATFLYRHPRVPGQWERRGYGLDGSLPLSP
Ga0070671_1013917121	3300005355	Switchgrass Rhizosphere	VVEDPKWELAILATVQGFYEKLLQDSIGGEIPVPAGLEAISLQEGDGEVHATLDRMRRWLRLLDQAITPAMLRRAFTTDTDPEIAEAVLRYFTRKKDTSDVNRDKTDLVATFLYRHPRVPGQWERRGFGLDGSLPLSPFEIALIEILADNDAPFLSEEHVQ
Ga0070671_1016667481	3300005355	Switchgrass Rhizosphere	VVEDPKWELAILATVQGFYEKLLQDSIGGEVPVPAGLEAISLQEGDGEVHATLERMRRWLRLLDQAITPAMLRRAFTAETDPEIAEAVLRYFTRKKDTDDVNRDKTDLVATFLYRHPRVPGQWERRGYGLDGSLPLSPFEIALIEILA
Ga0070659_1007008732	3300005366	Corn Rhizosphere	VVEDPKWELAILATVQGFYEKLLQDSIGGEVPVPAGLEAISLQEGDGEVHATLERMRRWLRLLDQAITPAMLRRAFTAETDPEIAEAVLRYFTRKKDTDDVNRDKTDLVATFLYRHPRVPGQWERRGYGLDGSLPL
Ga0066697_103267761	3300005540	Soil	VRLIEDPKWELAILATVQGFYERLLQEPVGADVPVPAGLDTISLQSEHDVLGTLERMRRWLRLLDLAITPAMLRRALTPDTDAEIAEALLRYLARKKDSSDFNRDKTDLVA
Ga0066699_111261231	3300005561	Soil	VQGFYEKLLQEPVGGEVPVPAGLEAISLQEGDGEVHATLDKMRRWLRLLDQAITPAMLRRAFTTEIDPEIAEAVLRYYTRKKDTSDVNRDKTDLVATFLYRHPRVPGQWERR
Ga0066654_109028911	3300005587	Soil	VQGFYEKLLQEPVGGEVPVPAGLEAISLQEGDGEVHATLDKMRRWLRLLDQAITPAMLRRAFTSEIDPEIAEAVLRYYTRKKDTSDVNRDKTDLVATFLYRHPRVPGQWERRGYGLDGSLPLS
Ga0068861_1002175122	3300005719	Switchgrass Rhizosphere	VVEDPKWELAILATVQGFYEKLLQDSIGGEVPVPAGLEAISLQEGDGEVHATLERMRRWLRLLDQAITPAMLRRAFTAETDPEIAEAVLRYFTRKKDTDDVNRDKTDLVATFLYRHPRVPGQWERRGYGLDGSLPLSPFEIALIEILADSDVPSLPEE
Ga0068870_104307601	3300005840	Miscanthus Rhizosphere	VVEDPKWELAILATVQGFYEKLLQDSIGGEVPVPAGLEAISLQEGDGEVHATLERMRRWLRLLDQAITPAMLRRAFTAETDPEIAEAVLRYFTRKKDTDDVNRDKTDLVATF
Ga0075028_1007104652	3300006050	Watersheds	VAEDPRWELAILATVQGFYEKLLQEHVGGEVPVPAGLEAISLQQGEVHATLEKMRRWLRLLDRAITPAMLRQAFTTETDPEIAEAVLRYFTRQKDISDENRDKTDLVATFLYRHPRVPGQ
Ga0075017_1002558751	3300006059	Watersheds	VVEDPKWELAILATVQGFYEKLLQDSIGGEIPVPAGLEAISLQEGEGEVHATLDRMRRWLRLLDQAITPAMLRRAFTSETDPEIAEAVLRYFTRKKDLSDVNRDKTDLVATFLYRHPRVPGQWERRGFGLDGSLPLSPFEIALIEILADNDVPFLSEEHV
Ga0070716_1010050551	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VVEDPKWELAILATVQGFYEKLLQDSIGGEIPVPAGLEAISLQEGDGEVHATLDRMRRWLRLLDQAITPAMLRRAFTTDTDPEIAEAVLRYFTRKKDTSDVNRDKTDLVATFLYRHPRVPGQWERRGFGLDGSLPLSPFEIALIEILADN
Ga0075021_109181422	3300006354	Watersheds	VVEDSKWELAILATVQGFYEKLLQDSVGGEVPVPAGLEAISLQEGDGEVHATLDKMRRWLRLLDHAITPAMLRRAFTTEIDPEIAEAVLRYYTRKKDTSDINRDKTDLVATFLYRHPRVP
Ga0075434_1016018281	3300006871	Populus Rhizosphere	VAEDPKWELAILATVQGFYEKLLQEHVGGEVPVPAGLEAISLQQGEGEVHATLEKMRRWLRLLDRAITPAMLRQAFSPETDPEIAEAVLRYFTRQKDTSDVNRDKTDLVATFLYRHP
Ga0075426_111453791	3300006903	Populus Rhizosphere	VAEDPKWELAILATVQGFHEKLLEECVGGQVPVPAGLEPISLQQGDGEVHATLDKMRRWLRLLDQAITPAMLRRGFTPDTDPEIAEAVLRYFTRQRDASDIYRDKTDLVATFLYRHPRVAGQWERRGYGLDGSLPLSPFEIALIEILADTDVPSLPEE
Ga0079219_102263051	3300006954	Agricultural Soil	VPDDPKWELALLATVQSFYQKLLSDNLGALVPTPRTLEREYVSSETADIRQTLAEMQTWLKVLDMAVTPAMLRQALTPETDPEIAEALIRYFVRTRNFSESNRDKTDLVGTFLYRHPRVPGQWETSGYGLDGALPLSPFEIAL
Ga0079219_125099291	3300006954	Agricultural Soil	VAEDPKWELAILATVQGFYEKLLQEAVEGEVPIPAGLETVSLQSDESDVNLTLNKMRRWLRLLDMAITPAMLRRGLTPDTDPEIAEALLRYFSRKKESGAVNRDKTDL
Ga0075435_1008057581	3300007076	Populus Rhizosphere	VAEDPKWELAILATVQGFYEKLLQEYVGGEVPVPAGLEAISLQQGDGEVHGTLDKMRRWLRLLDQSITPAMLRRAFTPETDPEIAEAVLRYFTRQKESSEVNRDKTDLVSTF
Ga0099829_105464032	3300009038	Vadose Zone Soil	VVEDPKWELAILATVQGFYEKLLQDSMGGEIPVPAGLEAISLQEGEGEVHATLDRMRRWLRLLDQAITPAMLRRAFTTETDPEIAEAVLRYFTRKKDTSDVNRDKTDLVATFLYRHPRVPGQWERRGFGLDGSLPLSPFEIALIEILA
Ga0114129_114358562	3300009147	Populus Rhizosphere	VTTEVAEDPKWELAILATVQGFYEKLLQEYVGGEVPVPAGLEAISLQQGDGEVHGTLDKMRRWLRLLDQSITPAMLRRAFTPETDPEIAEAVLRYFTRQKESSEVNRDKTDLVSTFLYRHPRVPGQWERRG
Ga0075423_125400351	3300009162	Populus Rhizosphere	VTTEVAEDPKWELAILATVQGFYEKLLQEYVGGEVPVPAGLEAISLQQGDGEVHGTLDKMRRWLRLLDQSITPAMLRRAFTPETDPEIAEAVLRYFTRQKESSEVNRDKT
Ga0105248_116691721	3300009177	Switchgrass Rhizosphere	VVEDPKWELAILATVQGFYEKLLQDSIGGAVPVPAGPEAVSLQEGDGEVHATLDRMRRWLRLLDHAITPAMLRRAFTSETDPEIAEAVLRYFTRKKDTSDINRDKTDLVATFLYRHPRVPGQWER
Ga0134082_104851101	3300010303	Grasslands Soil	VQGFYEKLLQEPVGGEVPVPAGLEAISLQEGDGEVHATLDNMRRWLRLLDQAITPAMLRRAFTPETDPEIAEAVLRYFTRLKDASDVNRDKTDLVATFLYRHPRVPGQWERRGYGLDGSLPLSPFEIAL
Ga0134111_105057551	3300010329	Grasslands Soil	VRLIEDPKWELAILATVQGFYERLLQEPVGADVPVPAGLDTISLQSEHDVLGTLERMRRWLRLLDLAITPAMLRRAFTPDTDAEIAEALLRYLARKKDTSDFNRDKTDLVATFLYRHPRVPGQWDRRGYGLDG
Ga0134071_100784551	3300010336	Grasslands Soil	VRLIEDPKWELAILATVQGFYERLLQEPVGADVPVPAGLDTISLQSEHDVLGTLERMRRWLRLLDLAITPAMLRRAFTPDTDAEIAEALLRYLARKKDTSDFNRDKTDLVATFLYRHPRVPGQWDRRGYGLDGVLPLSPFEIALIEIL
Ga0126377_103410283	3300010362	Tropical Forest Soil	VVEDPKWELAILATVQGFYEKLLQESVGGEVPVPSGLEAISLQSDGAIHETLEQMRRWLRLLDMAITPAMLRRAFVPDTDPEIAEAVLRYLTRRKDGSDNNRDKTDLVATFLYRHP
Ga0126377_115778662	3300010362	Tropical Forest Soil	VQECGLVEDPKWELAILATVQGFYEKLLQEHLQGEVPIPAGLEAISLQQAEGDVETTLERMRLWLRLLDMAITPAMLRRAFTAETDSEIAEALLRYLVRKKDGGDFNRDKTDLVATFLYRHPRVPGQWERRGYGLDGSLPLSPFEIALIEILADS
Ga0134127_127419231	3300010399	Terrestrial Soil	VVEDPKWELAILATVQGFYEKLLQESVEGEVPIPSGLETVSLQSDESDVNQTLTKMRRWLRLLDMAITPAMLRRALTLDTDPEIAEALLRYFSRRKELGAVNRDKTDLVATFLYTHPRIPGQWERRGYGLDGSLTLSPFEIAL
Ga0134121_114684311	3300010401	Terrestrial Soil	VVEDPKWELAILATVQGFYEKLLQESIGGEVPIPAGLEAISLQEGDGEVHATLDKMRRWLRLLDHAITPAMLRRAFTTETDPEIAEAVLRYFTRKKDTSDLNRDKTDLVATFLYRHPRVPGQWERRGYGLDGSLPL
Ga0137392_110459362	3300011269	Vadose Zone Soil	VVEDPKWELAILATVQGFYEKLLQDSMGGEIPVPAGLEAISLQEGEGEVHATLDRMRRWLRLLDQAITPAMLRRAFTTETDPEIAEAVLRYFTRKKDTSDVNRDKTDLVATFLYRHPRVP
Ga0137389_100167431	3300012096	Vadose Zone Soil	VVEDPKWELAILATVQGFYEKLLQDSVGGEVPVPAGLEAISLQEGDGEVHATLDKMRRWLLLLDQAISPAMLRRAFTADIDPEIAEAVLRYYTRKKDTSDVNRDKTDLVATFLYRHPRVPGQWERRGYGLDGSLPLSPFEI
Ga0137388_100112211	3300012189	Vadose Zone Soil	VVEDPKWELAILATVQGFYEKLLQDSVGGEVPVPAGLEAISLQEGDGEVHATLDKMRRWLLLLDQAISPAMLRRAFTADIDPEIAEAVLRYYTRKKDTSDVNRDKTDLVATFLYRHPRVP
Ga0137362_101186101	3300012205	Vadose Zone Soil	VVEDPKWELAILATVQGFYEKLLQDSIGGEIPVPAGLEAISLQEGEGDVHATLDRMRRWLRLLDQAITPAMLRRAFTTETDPEIAEAVLRYFTRKKDTSDVNRDKTDLVATFLYRHPRVPGQWERRGFGLDGSLPLSP
Ga0150984_1098860511	3300012469	Avena Fatua Rhizosphere	VVEDPKWELAILATVQGFYEKLLQDSIGGEVPVPAGLEAVSLQEGGGDVHATLDRMRRWLRLLDHAITPAMLRRAFTSETDPEIAEAVLRYFTRKKDTSDINRDKTDLVATFLYRHPRVPGQWERRGYGLDGSLPLSPFEIALIEILADTDPPSLPEEH
Ga0137395_108158131	3300012917	Vadose Zone Soil	VVEDPKWELAILATVQGFYEKLLQDSIGGEIPVPAGLEAISLQEGEGEVHATLDRMRRWLRLLDQAITPAMLRRAFTTETDPEIAEAVLRYFTRKKDTSDVNRDKTDLVATFLYRH
Ga0164301_101539601	3300012960	Soil	VPEDPKWELAILATVQGFYEKLLQEYVGGEVPVPTGLEAISLQQGEGEVHTTLEKMRRWLRLLDQAITPAMLRRAFTPETDPEIAEAVLRYFTRLKDISDVNRDKTDLVATFLYRHPRVAGQWERRGYGLDGSLPLSPFEI
Ga0164302_104480351	3300012961	Soil	VPEDPKWELAILATVQGFYEKLLQEYVGGEVPVPTGLEAISLQQGEGEVHTTLEKMRRWLRLLDQAITPAMLRRAFTPETDPEIAEAVLRYFTRLKDISDVNRDKTDLVAT
Ga0134077_100208033	3300012972	Grasslands Soil	VRLIEDPKWELAILATVQGFYERLLQEPVGADVPVPAGLDTISLQSEHDVLGTLERMRRWLRLLDLAITPAMLRRAFTPDTDAEIAEALLRYLARKKDTSDFNRDKTDLVATFLYRHPRVPGQWDRRGYGLDGALPLSPFEIALIE
Ga0134110_102961921	3300012975	Grasslands Soil	VRLIEDPKWELAILATVQGLYEKLLQEPVGADVPVPAGLDTVSLQSEHDVLGTLERMRRWLRLLDLAITPAMLRRALTPDTDAEIAEALLRYLARKKDSSDFNRDKTDLVATFL
Ga0164307_102488742	3300012987	Soil	VPEDPKWELAILATVQGFYEKLLQEYVGGEVPVPTGLEAISLQQGEGEVHTTLEKMRRWLRLLDQAITPAMLRRAFTPETDPEIAEAVLRYFTRLKDISDVNRDKTDLVATFLYRHPRV
Ga0164307_104176762	3300012987	Soil	VVEDPKWELAILATVQGFYEKLLQDSIGGEVPVPSGLEAISLQEGDGEVHATLERMRRWLRLLDQAITPAMLRRAFTAETDPEIAEAVLRYFTRKKDTDDVNRDKTDLVATFLYR
Ga0164305_115000451	3300012989	Soil	VVEDPKWELAILATVQGFYEKLLQDSIGGEVPVPAGLEAVSLQEGDGEVHATLDRMRRWLRLLDHAITPAMLRRAFTSETDPEIAEAVLRYFTRKKDTSDINRDKTDLVATFLYRHPRVPGQWERRGYGLDGSLP
Ga0157378_108213781	3300013297	Miscanthus Rhizosphere	VPEDPKWELAILATVQGFYEKLLQEYVGGDVPVPTGLEATSLQRGEGEVHTTLEKMRRWLRLLDQAITPAMLRRAFTTETDPEIAEAVLRYFTRLKDISDVNRDKTDLVATFLYRHPRVPGQWERRGYGLDG
Ga0181522_101528612	3300014657	Bog	LSLAEDPKWELAILATVQGFYEKLLQSYVGGEIPIPDGLGSVSLQGHADVNQTLVKMHRWLRILDLAITPAMLRRAFSDEVDPEIAEAMLRHFTRKRESSEVNRDKADLVATFLYRHPRVPGQWEKRGFGLDGSLPLSPFEIALIEIL
Ga0157376_100946831	3300014969	Miscanthus Rhizosphere	LAILATVQGFYEKLLQDSIGGEIPVPAGLEAISLQEGDGEVHATLDRMRRWLRLLDQAITPAMLRRAFTTDTDPEIAEAVLLYFTRKKDTSDVNRDKTDLVATFLYRHPRVPGQWERRGF
Ga0157376_122175391	3300014969	Miscanthus Rhizosphere	VVEDPKWELAILATVQGFYEKLLQDSIGGEVPVPAGLEAVSLQEGDGEVHATLDRMRRWLRLLDHAITPAMLRRAFTSETDPEIAEAVLRYFTRKKDTSDINRDKTDLVATFLYRHPRVPGQWERRGYGLDGSLPLSPFEIALIEILADTDPPS
Ga0182039_118557161	3300016422	Soil	MAIDDPKWELAILATVQGFYEKLLQDHVGGEVPVPAGLETVSLQESDDNVVGTLDRMYRWLRLLDMAITPAMLRRALTEDTDPEIAEAILRYFVRKREGTGDGHRDKADLVATFLYRHPRVPGQWEQ
Ga0134112_101467682	3300017656	Grasslands Soil	VRLIEDPKWELAILATVQGFYERLLQEPVGADVPVPAGLDTISLQSEHDVLGTLERMRRWLRLLDLAITPAMLRRALTPDTDAEIAEALLRYLARKKDSSDFNRDKTDLVATFLYRHPRVPGQWDRRGYGL
Ga0187802_100825331	3300017822	Freshwater Sediment	LVEDPKWELAILATVQGFYEKLLQPCVGGEVPVPAGLEAISLQNEENVLATLASMHRWLRLLDLAINPAMLRRAFTPETDPEIAEALLRYFIRQQDTNDIHRDKTDLVATFLYRHPR
Ga0187818_101918882	3300017823	Freshwater Sediment	LVEDPKWELAILATVQGFYEKLLEEPVGGEVPVPAGLEVVSLQESGGNVHGTLTAMRRWLRLLDMAITPAMLRRAFTAETDPEIAEAILRYLTRKKDSSDANRDKTDLIATFLYRQPRVPGQWESRGY
Ga0187779_107333741	3300017959	Tropical Peatland	LAEDPKWELAILATVQGFYEKLLQAHVGGEVPVPGGLEAVSLQQAEDDVNLTLANMRRWLRLLDMATTPAMLRQALTPETDPEIAEAILRYFVRKKDFSSVNRDKTDLVATFLYRHPRVPGQWERRGYGLDGSLPLSP
Ga0187783_100904413	3300017970	Tropical Peatland	VEDPKWEFAILATVQGFYENLLEQSVHAEVPVPAGLEAGSFAADNQLTETLSLLHRWLRLLDLAITPAMLRRALTPETDPEIAEAVLRHYTRHKDSTDRQRDKTDVVATFLYRHPRVPGQWERRGYGLDGALPPS
Ga0187815_104601361	3300018001	Freshwater Sediment	LVEDPKWELAILATVQGFYEKLLQPCVGGEVPVPAGLEAISLQNEENVLATLASMHRWLRLLDLAINPAMLRRAFTPETDPEIAEALLRYFIRQQDTNDIHRDKTDLVATF
Ga0187804_101512181	3300018006	Freshwater Sediment	LPSPKSEGLVCRRNLVEDPKWELAILATVQGFYEKLLQEPVGGEVPVPAGLEVVSLQESGGNVYGTLSSMRRWLRLLDMAITPAMLRQAFTAETDPEIAEAILRYLTRKKDSSDANRDKTDLI
Ga0187766_114400491	3300018058	Tropical Peatland	LAEDPKWELAILATVQGFYEKLLQAHVGGEVPVPGGLEAVSLQQAEDDVNLTLANMRRWLRLLDMATTPAMLRQALTPETDPEIAEAILRYFVRKKDFSSVNRDKTDLVATFLYRHPRVP
Ga0187784_108177571	3300018062	Tropical Peatland	VGEDSRWELAILATVQGFYEKLLQEHVDGEVPVPAGLEAISLQETGDEVSSTLRRMHRWLRLLDMAITPAMLRRGLTQETDPEIAEAMIRYFARRQDGSSANRDKMDLVATFLYRHPRVPGQWEKRGYGLDGSLPLSPFEIA
Ga0187772_106210731	3300018085	Tropical Peatland	LVEDPKWELAILATVQGFYEKLLQPCVGGEVPVPAGLEAISLQNEENVLATLASMHRWLRLLDLAINPAMLRRAFTPETDPEIAEALLRYFIRQQNTNDIHRDKTDLVATFLYRHPRVPGQWER
Ga0187770_105071042	3300018090	Tropical Peatland	VGEDSRWELAILATVQGFYEKLLQEPVEGEVPVPAGLEAISLQEPDDDVGSTLRRMHRWLRLLDMAITPAMLRRALTAETDPEIAEAMIRYFARRQDGSGGNRDKMDLVATFLYRHPRVPGQWEKRGYGLDGSLPLSPFEIALIEILGDVEA
Ga0187770_106277591	3300018090	Tropical Peatland	LVEDPKWELAILATVQGFYEKLLQESVGGEVPVPAGLEAVSLQSDDDIAGTLSAMHRWLRLLDLAITPAMLRRAFTADTDPEIAEAVLRYFTRKKDPSDANRDKADVVATFLYRHPRVPGQWERRGYGLDGSLPLSPFE
Ga0187770_106679101	3300018090	Tropical Peatland	MSSLQQDRKRVSEDLQWELSILATVQGFYEKLLQEDVEGEVPVPAGLEAISLQEAEDDVRGTLHRMQRWLRLLDMAITPAMLRRALTQETDPEIAEAMIRYFARRQDGSDAIRDKMDLVTTFLYRHPRVPGQWEKRGYGLDGSL
Ga0187770_117693581	3300018090	Tropical Peatland	KFNLVTLGTVSCDAVPGSYELVEDPKWELAILATVQGFYEKLLQPCVGGEVPVPAGLEAVSLQNDENVVATLASMHRWLHLLDLAINPAMLRRALTPDTDPEIAEALLRYFMRQKTVSEVHRDKTDLVATFLYRHPRVPGQWEQRGYGLDGSLPLAPFEIALIEILSD
Ga0181514_15860781	3300019268	Peatland	LSLAEDPKWELAILATVQGFYEKLLQSYVGGEIPIPDGLGSVSLQGHADVNQTLVKMHRWLRILDLAITPAMLRRAFSDEVDPEIAEAMLRHFTRKRESSEVNRDKADLVATFLYRHP
Ga0193731_10083961	3300020001	Soil	VAEDPKWELAILATVQGFYEKLLQDSVGGEVPVPAGLEAISLQQGEGEVRATLDKMRRWLRLLDQAITPAMLRRAFTTETDPEIAEAVLRYFTRQKDTSDVNRDKTDLVATFLYRHPRVPGQWERRGYGLDGSLPLSPFEIALIEILA
Ga0193735_11312451	3300020006	Soil	VAEDPKWELAILATVQGFYEKLLQDSVGGEVPVPAGLEAISLQQGEGEVRATLDKMRRWLRLLDQAITPAMLRRAFTTETDPEIAEAVLRYFTRQKDTSDVNRDKTDLVATFLYRHPRVPGQWE
Ga0210403_114933401	3300020580	Soil	VVEDPKWELAILATVQGFYEKLLQDHVGGEVPVPAGLEAISLQQGDGEVRATLDKMRRWLRLLDQAITPAMLRRAFNSEIDPEIAEAILRYYTRKKDASDINRDKTDLVATFLYRHPRVPGQWERRGYGLDGSLP
Ga0210400_108244951	3300021170	Soil	VVEDPKWELAILATVQGFYEKLLQDSIGGEIPVPAGLEAISLQEGEGEVHATLDRMRRWLRLLDQAITPAMLRRAFTTETDPEIAEAVLRYFTRKKDTSDVNRDKTDLVATFLYRHPRVPGQWERRGFGLD
Ga0210396_103564302	3300021180	Soil	VVEDPKWELAILATVQGFYEKLLQDSIGGEVPVPAGLEAISLQEGDGEVHATLDRMRRWLRLLDQAITPAMLRRAFTAETDPEIAEAVLRYFTRKKDTSDVNRDKTDLVATFLYRHPRVPGQWERRGFGLDGSLPLSPFEIALIEILADTDVPSL
Ga0210384_102669791	3300021432	Soil	VVEDPKWELAILATVQGFYEKLLQDHVGGEVPVPAGLEAISLQQGDGEVRATLDKMRRWLRLLDQAITPAMLRRAFTSEIDPEIAEAILRYYTRKKDASDINRDKTDLVATFLYRHPRVPGQWERRGYGLDGSLPLSPFEIALIE
Ga0210384_113013141	3300021432	Soil	VVEDPKWELAILATVQGFYEKLLQESVGGEVPVPSGLEAISLQSDGGVLETLSSMHRWLRLLDLAITPAMLRRAFTADTDPEIAEAVLRYFMRSKDGTEVHRDKTDLVTTFLYRHPRVPGQWERRGYGLD
Ga0210402_107153351	3300021478	Soil	VVEDPKWELAILATVQGFYEKLLQDHVGGEVPVPAGLEAISLQQGDGEVRATLDKMRRWLRLLDQAITPAMLRRAFTSEIDPEIAEAILRYYTRKKDASDINRDKTDLVATFLYRHPRVPGQWERRGYGLDGSLPLSPFEIALIEILADTDVPSLSEEHVQ
Ga0207699_113121891	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VVEDPKWELAILATVQGFYEKLLQDSIGGEIPVPAGLEAISLQEGDGEVHATLDRMRRWLRLLDQAITPAMLRRAFTTDTDPEIAEAVLRYFTRKKDTSDVNRDKTDLVATFLYRHPRVPGQWERRGFGLDGSLPLSPFEIALIEILADNDAPFL
Ga0207699_114563471	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LATVQGFYEKLLQECVGGEVPVPAGLEAISLQQGEGEVHATLDKMRRWLHLLDQAITPAMLRRAFTPETDPEIAEAVLRYFTRLKDASDVNRDKTDLVATFLYRHPRVPGQWERRGYGLDGSLPLSPFEIALIE
Ga0207648_118233611	3300026089	Miscanthus Rhizosphere	VVEDPKWELAILATVQGFYEKLLQDSIGGEVPVPAGLEAISLQEGDGEVHATLDRMRRWLRLLDQAITPAMLRRAFTSETDPEIAEAVLRYFTRKKDTDDVNRDKTDLVATFLYRHPRVPGQWERRGYGLDGSLPLSPFE
Ga0209156_101843671	3300026547	Soil	VRLIEDPKWELAILATVQGLYEKLLQEPVGADVPVPAGLDTVSLQSEHDVLGTLERMRRWLRLLDLAITPAMLRRALTPDTDAEIAEALLRYLARKKDSSDFNRDKTDLVATFLYRHPRVPGQWDRRGYGLDGALPLSPLEIALIEI
Ga0209734_10559791	3300027535	Forest Soil	VVEDPKWELAILATVQGFYEKLLQDSIGGEVPVPAGLEAISLQEGDGEVYATLDRMRRWLRLLDQAITPAMLRRAFTAETDPEIAEAVLRYFTRKKDTSDINRDKTDLVATFLYRHPRVPGQWERRGFGLDGS
Ga0209419_11055761	3300027537	Forest Soil	VVEDPKWELAILATVQGFYEKLLQDSIGGEVPVPAGLEAISLQEGDGEVHATLDRMRRWLRLLDQAITPAMLRRAFTAETDPEIAEAVLRYFTRKKDTSDINRDKTDLVATFLYRHPRVPGQWERRGFGLDGSLPLSPFEIALIEILADT
Ga0209328_102256131	3300027727	Forest Soil	VVEDPKWELAILATVQGFYEKLLQDSIGGEVPVPAGLEAISLQEGDGEVHATLDRMRRWLRLLDQAITPAMLRRAFTAETDPEIAEAVLRYFTRKKDTSDINRDKTDLVATFLYRHPRVPGQWERRGFGLDGSLPLSPFEIALIEILADTDVPS
Ga0209167_100876121	3300027867	Surface Soil	VVEDPKWELAILATVQGFYEKLLQEVVGGEVPVPSGLEAISLQESEGSVLATLSSMHRWLRLLDLAITPAMLRRAFTPDTDAEIAEAILRYFMRSKDGSDTHRDKTDLVTTFLYRHPRV
Ga0209283_102401222	3300027875	Vadose Zone Soil	VAEDPKWELAILATVQGFYEKLLQEYVGGEVPVPAGLEAISLQQGDGEVHATLDKMRRWLRLLDQAITPAMLRRAFTLETDPEIAEAVLRYFTRQKDTSDVNRDKTDLVATFLYRHPRVPGQWERRGYGLDGSLPL
Ga0209068_107060811	3300027894	Watersheds	VVEDSKWELAILATVQGFYEKLLQDSVGGEVPVPAGLEAISLQEGDGEVHATLDKMRRWLRLLDHAITPAMLRRAFTTEIDPEIAEAVLRYYTRKKDTSDINRDKTDLVATFLYRHPRVPGQWERRGY
Ga0302147_103351061	3300028566	Bog	LSLAEDPKWELAILATVQGFYEKLLQGYVGGEIPIPDGLGSVSLQGHADVNQTLVKMHRWLRILDLAITPAMLRRAFSDEVDPEIAEAMLRHFTRKRESSEVNRDKADLVATFLYRHPRVPGQWEKRGFG
Ga0257175_10163301	3300028673	Soil	VAEDPKWELAILATVQGFYEKLLQECVGGEVPVPAGLEAISLQQGEGEVHATLNKMRRWLRLLDQAITPAMLRRAFTSETDPEIAEAVLRYFARQKDTSDVNRDKTDLVATFLYRHPRVP
Ga0302269_11150972	3300028766	Bog	LSLAEDPKWELAILATVQGFYEKLLQGYVGGEIPIPDGLGSVSLQGHADVNQTLVKMHRWLRILDLAITPAMLRRAFSDEVDPEIAEAMLRHFTRKRESSEVNRDKADLVATFLYRHPRVPGQWEKRG
Ga0302278_104665251	3300028866	Bog	LSLAEDPKWELAILATVQGFYEKLLQGYVGGEIPIPDGLGSVSLQGHADVNQTLVKMHRWLRILDLAITPAMLRRAFSDEVDPEIAEAMLRHFTRKRESSEVNRDKADLVATFLYRHPRV
Ga0311328_110828901	3300029939	Bog	LSLAEDPKWELAILATVQGFYEKLLQGYVGGEIPIPDGLGSVSLQGHADVNQTLVKMHRWLRILDLAITPAMLRRAFSDEVDPEIAEAMLRHFTRKRESSEVNRDKADLVATFLYRHPRVPGQWEKRGFGLDGSLP
Ga0311350_102103813	3300030002	Fen	VVEDPKWDLAILATVQGFYEKLLQELVGGEVPVPGGLEAISLQQSEGDIHETVERMRKWLRLLDMAITPAMLRRAFVADTDPEIAEALLRYLIRRKDSSDVNRDKADL
Ga0302175_101478761	3300030014	Fen	VVEDPKWDLAILATVQGFYEKLLQELVGGEVPVPGGLEAISLQQSEGDIHETVERMRKWLRLLDMAITPAMLRRAFVADTDPEIAEALLRYLIRRKDSSDVNRDKADLVATFLYRHPRVPGQWERRGYGLDGSLPLSPFEIALI
Ga0170818_1148877911	3300031474	Forest Soil	VSEDPKWELAILATVQGFYEKLLQECVGGEVPVPAGLEGISLQQGEGDVHATLDKMRRWLRLLDQAITPAMLRRAFTPDTDPEIAEAVLRYFTRLKDTGDVNRDKTDLVATFLYRHPRVPGQWERRGFGLER
Ga0310813_101966842	3300031716	Soil	VVEDPKWELAILATVQGFYEKLLQDSIGGEVPVPAGLEAISLQEGDGEVHATLERMRRWLRLLDQAITPAMLRRAFTAETDPEIAEAVLRYFTRKKDTDDVNRDKTDLVATFLYRHPRVPGQWERRGYGLD
Ga0308176_100314051	3300031996	Soil	VLVEDPKWELAILATVQGFCEKLLQAPVGGEIPVPAQLETISLQQSEGDVHETLALMRRWLRLLDLAITPALLRQAFTTETDPEIAEALLRYFTRNKDGSDTNRDKTDLIATFLYRHPRVPGQWERRGYGLDGSLPLSPFEIALIEILADSDVPELPEEHLQ
Ga0307472_1000806502	3300032205	Hardwood Forest Soil	VVEDPKWELAILATVQGFYEKLLQDSIGGEIPVPAGLEAISLQEGDGEVHATLDRMRRWLRLLDQAITPAMLRRAFTTDTDPEIAEAVLRYFTRKKDTSDVNRDKTDLVATFLYRHPRVPGQWERRGFGLDGALPLSP
Ga0307472_1001450152	3300032205	Hardwood Forest Soil	VVEDPKWELAILATVQGFYEKLLQDSVGGEVPVPAGLEAISLQEGDGEVHATLDKMRRWLLLLDQAITPAMLRRAFTADIDPEIAEAVLRYYTRKKDTSDVNRDKTDLVATFLYRHPRVPGQWERRGYGLDGSLPLSPFEIALIEIL
Ga0335082_101287163	3300032782	Soil	VTLVLYPEVTCASSSTLFTIVTPPLIEPGSEALVEDPKWELAILATVQGFYEKLLQSSVGGEVPVPQGLEAISLQDDSDVTETLARMRRWLRLLDMAITPALIRHALTEDTDPEIAEALLRYLVRKKDVTGSRRDKADLVATFLYRHPRVPGQWDRRGYGLDGSLPLSPFEIALI
Ga0335080_112622631	3300032828	Soil	VVEDPKWELAILATVQGFYEKLLQDSIGGEVPVPAGLEAISLQAGDGEVHATLERMRRWLRLLDQAITPAMLRRAFTAETDPEIAEAVLRYFTRKKDTSDVNRDKTDLVATFLYR
Ga0335069_111824642	3300032893	Soil	VEDPKWELAILATVQGFYEKLLQESLEGEVPVPAGLETISLQQDDVSDTLERMRLWLRLLDMAITPAMLRGAFTADTDPEIAEALLRYLVRTKDGSDRNRDKTDLVA
Ga0335069_118826732	3300032893	Soil	LVEDPKWELAILATVQGFYEKLLQTPLEGEVPVPQGLEAISLQENEGDVHITLTRMRRWLTLLDMAITPAMLRCALTEDTDPEIAEAILRYLVRRKEASDNNRDKTDLVATF
Ga0370501_0177330_2_379	3300034195	Untreated Peat Soil	VVEDPKWELAILATVQGFYEKLLQESIGGEIPVPAGLEAISLQEGDGEVYATLDRMRRWLRLLDQAITPAMLRRAFTLETDPEIAEAVLRYFTRKKDTSDVNRDKTDLVATFLYRHPRVPGQWERR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103752

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences