Metagenome Family F103805

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103805
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	107 residues
Representative Sequence	MTKFMHDLGIAARGKQMTRVVETLKGEGKLVRSMAENIVTYHLEVVEETGIAPMSPGLRTIAGCVTLLYTDLELQPSLEKFTLHLQDGRRLQVFCKRPGWIVATGGIRND
Number of Associated Samples	61
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.32 %
% of genes near scaffold ends (potentially truncated)	31.68 %
% of genes from short scaffolds (< 2000 bps)	78.22 %
Associated GOLD sequencing projects	54
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (48.515 % of family members)
Environment Ontology (ENVO)	Unclassified (48.515 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.297 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.00% β-sheet: 40.91% Coil/Unstructured: 49.09%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF02687	FtsX	2.97
PF01757	Acyl_transf_3	2.97
PF01180	DHO_dh	2.97
PF13180	PDZ_2	1.98
PF13231	PMT_2	1.98
PF00581	Rhodanese	1.98
PF02368	Big_2	1.98
PF00593	TonB_dep_Rec	1.98
PF14329	DUF4386	0.99
PF03544	TonB_C	0.99
PF07715	Plug	0.99
PF13560	HTH_31	0.99
PF01545	Cation_efflux	0.99
PF01476	LysM	0.99
PF00691	OmpA	0.99
PF12728	HTH_17	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	2.97
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	2.97
COG0167	Dihydroorotate dehydrogenase	Nucleotide transport and metabolism [F]	2.97
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	2.97
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	2.97
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.99
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.99
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.99
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	93.07 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	89.11 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	89.11 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	89.11 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.99 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005174\|Ga0066680_10829398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300005178\|Ga0066688_10546145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300005181\|Ga0066678_10919391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300005434\|Ga0070709_11432586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300005445\|Ga0070708_100011200	All Organisms → cellular organisms → Bacteria	7294	Open in IMG/M
3300005445\|Ga0070708_100195305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1893	Open in IMG/M
3300005445\|Ga0070708_100275658	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1582	Open in IMG/M
3300005445\|Ga0070708_101585053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300005451\|Ga0066681_10495431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300005467\|Ga0070706_100434011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1222	Open in IMG/M
3300005467\|Ga0070706_101057397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300005467\|Ga0070706_101294607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300005467\|Ga0070706_101865442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300005468\|Ga0070707_100712370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	966	Open in IMG/M
3300005468\|Ga0070707_101472590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300005471\|Ga0070698_100838735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300005471\|Ga0070698_102125293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300005536\|Ga0070697_100026373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4641	Open in IMG/M
3300005536\|Ga0070697_100784535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	843	Open in IMG/M
3300005553\|Ga0066695_10564654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300005554\|Ga0066661_10892142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300005556\|Ga0066707_10066752	All Organisms → cellular organisms → Bacteria	2134	Open in IMG/M
3300005557\|Ga0066704_10066598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2309	Open in IMG/M
3300005557\|Ga0066704_10182265	All Organisms → cellular organisms → Bacteria → Acidobacteria	1416	Open in IMG/M
3300005557\|Ga0066704_10640005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300005558\|Ga0066698_10403619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	939	Open in IMG/M
3300005558\|Ga0066698_11078521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300005561\|Ga0066699_10648514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300005586\|Ga0066691_10688747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300005598\|Ga0066706_10490428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	979	Open in IMG/M
3300006031\|Ga0066651_10305668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300006173\|Ga0070716_100046470	All Organisms → cellular organisms → Bacteria	2443	Open in IMG/M
3300006796\|Ga0066665_10096186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2161	Open in IMG/M
3300006797\|Ga0066659_11103606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300009012\|Ga0066710_100425003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1987	Open in IMG/M
3300009137\|Ga0066709_100220518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2511	Open in IMG/M
3300009137\|Ga0066709_101838924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300010043\|Ga0126380_11459592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300010304\|Ga0134088_10137404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1160	Open in IMG/M
3300012189\|Ga0137388_10941407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300012199\|Ga0137383_10062172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2681	Open in IMG/M
3300012199\|Ga0137383_10830282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300012201\|Ga0137365_10237786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1357	Open in IMG/M
3300012201\|Ga0137365_10866214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300012205\|Ga0137362_10482933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1072	Open in IMG/M
3300012205\|Ga0137362_10606820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300012205\|Ga0137362_10619460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	933	Open in IMG/M
3300012205\|Ga0137362_11391128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300012206\|Ga0137380_10339701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1341	Open in IMG/M
3300012206\|Ga0137380_10808843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	809	Open in IMG/M
3300012206\|Ga0137380_10944505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300012207\|Ga0137381_10545401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1011	Open in IMG/M
3300012209\|Ga0137379_10013465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7805	Open in IMG/M
3300012209\|Ga0137379_10028873	All Organisms → cellular organisms → Bacteria	5339	Open in IMG/M
3300012209\|Ga0137379_10101366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2769	Open in IMG/M
3300012209\|Ga0137379_10459459	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300012210\|Ga0137378_10351433	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300012210\|Ga0137378_11413880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300012211\|Ga0137377_10368640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1374	Open in IMG/M
3300012349\|Ga0137387_10289833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1183	Open in IMG/M
3300012349\|Ga0137387_10685720	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300012350\|Ga0137372_10206226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1570	Open in IMG/M
3300012350\|Ga0137372_10440540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	979	Open in IMG/M
3300012350\|Ga0137372_10462067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	950	Open in IMG/M
3300012351\|Ga0137386_10031678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3604	Open in IMG/M
3300012351\|Ga0137386_10206449	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1411	Open in IMG/M
3300012353\|Ga0137367_11199962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300012354\|Ga0137366_10302303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1177	Open in IMG/M
3300012357\|Ga0137384_10219332	All Organisms → cellular organisms → Bacteria	1590	Open in IMG/M
3300012361\|Ga0137360_10984801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300012362\|Ga0137361_10183957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1884	Open in IMG/M
3300012362\|Ga0137361_10224686	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1704	Open in IMG/M
3300012362\|Ga0137361_10766666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300012582\|Ga0137358_11001938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300012685\|Ga0137397_10499953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300012922\|Ga0137394_10287376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1406	Open in IMG/M
3300012923\|Ga0137359_10027725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4846	Open in IMG/M
3300012923\|Ga0137359_10121469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2318	Open in IMG/M
3300012929\|Ga0137404_10062112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2901	Open in IMG/M
3300012929\|Ga0137404_10073713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2688	Open in IMG/M
3300012929\|Ga0137404_10093053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2416	Open in IMG/M
3300012929\|Ga0137404_10384315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1235	Open in IMG/M
3300012929\|Ga0137404_10532446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1051	Open in IMG/M
3300012929\|Ga0137404_10964350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300012976\|Ga0134076_10440512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300014166\|Ga0134079_10535166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300015053\|Ga0137405_1120211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300015264\|Ga0137403_10012016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9508	Open in IMG/M
3300015264\|Ga0137403_10052552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4195	Open in IMG/M
3300018431\|Ga0066655_10344572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	977	Open in IMG/M
3300019789\|Ga0137408_1053137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2396	Open in IMG/M
3300025910\|Ga0207684_10039286	All Organisms → cellular organisms → Bacteria → Acidobacteria	4014	Open in IMG/M
3300025910\|Ga0207684_10591066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	948	Open in IMG/M
3300025922\|Ga0207646_10084413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2842	Open in IMG/M
3300025922\|Ga0207646_10628605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	963	Open in IMG/M
3300025922\|Ga0207646_10791226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M
3300025939\|Ga0207665_10124763	All Organisms → cellular organisms → Bacteria → Acidobacteria	1822	Open in IMG/M
3300026532\|Ga0209160_1271425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300026538\|Ga0209056_10702525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300027748\|Ga0209689_1154904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1090	Open in IMG/M
3300031720\|Ga0307469_11120639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.22%
Loam	Environmental → Terrestrial → Soil → Loam	21.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	21.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.99%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	48.51%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	21.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	20.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066680_108293982	3300005174	Soil	MRKFMLDDLGITGRGKQMTRVVETLKGEGKLVSSTTKNIVAYNLEVVEETGIAPRSPGLRTIAGCVTLLYTDLELQPSLERFTLHLQDGGKLQVFC
Ga0066688_105461451	3300005178	Soil	MTKLMHDLGIAARGKQMTRVVETLKGQGKLVRSMAENIVTYHLEVVEETGIAPTSPGLRTIAGCVALLYSDLELQPSLERFTLHLQDGRRLQVFCKRPGWIVATGGIRND*
Ga0066678_109193911	3300005181	Soil	MFDDLGIAGRGKQMTRVIETLKGEGKLVSSIAENIVSYHLEVVEEAGIAPKSPGLRTIAGCVALLYSDLELQPSLQKFTLYLQDGGKLQVFCKRPGWIVATGGIRND*
Ga0070709_114325861	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRKSADDLGIAGRGKQMARVIETLKGEGKLVSSIAENTVTYHLEMIEEAGISPRSPGLRTIVGCVALLDSGLELQPSLERFTLHLQDGRRLEVFCKRPGWIVATGGIQSA*
Ga0070708_1000112004	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRKFMFDDLGIAGRGKQMTRVIETLKGEGKLVSSIAENIVSYHLEVVEEAGIAPKSPGLRTIAGCVALLYSDLELQPSLQKFTLYLQDGGKLQVFCKRPGWIVATGGIRND*
Ga0070708_1001953052	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNDLGIAARGKQMTRVVETLKGEGTLVSSTAKDIVTYHLEVVEETGIAPMSPGLRTIAGCVAILYSDLELQPSLERFTLHLQDGRRLQVFCKRPGWIVATGGIRSD*
Ga0070708_1002756582	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRRFMLNDLGIAGRGKQMTRVVETLKGEGTLVSSTAKNIVTYHLEVVEETGIAPMSPSLRTIAGCVAILYSDLELQPSLERFTLHLQDGGTLQVFCKRPGWIVATGGIRND*
Ga0070708_1015850531	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRKLMHDLGIAARGRQMIRVVETLKGEGKLVRSMAENIVTYHLEVVEETGIAPTSSGLRTIAGCVTLLYTDLELQPSLEKFTLHLQDGRRLQV
Ga0066681_104954311	3300005451	Soil	MRRFMLNDLGITARGRQMTRVVETLKGEGKLVRSMAENIVTYHLEVVEETGIAPTSSGLRTIAGCVTLLYTDLELQPSLEKSTLYLQDGRKLQVFCKRPGWIVATGGIRND*
Ga0070706_1004340112	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRKLMHDLGIAARGRQMIRVVETLKGEGKLVRSMAENIVTYHLEVVEETGIAPTSSGLRTIAGCVTLLYTDLELQPSLEKFTLHLQDGRRLQVFCKRPGWIVATGGIRSD*
Ga0070706_1010573972	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTKFMHDLGIAARGKQMTRVVETLKGEGKLVRSMAENIVTYHLEVVEETGIAPMSPGLRTIAGCVTLLYTDLELQPSLEKFTLHLQDGRRLQVFCKRPGWIVATGGIRND*
Ga0070706_1012946072	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RGKQMTRVVETLKGEGKLVSSIAENILTYHLEVVEETGIAPMSPGLRTITGCVALLYSDLELQPSLERFTLHLQDGRRFQVFCKRPEWIVATGGIQND*
Ga0070706_1018654421	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLNDLGIAGRGKQMTRVVETLKGEGTLVSSTARNIVTYHLEVVEETGIAPMSPSLRTIAGCVAILYSDLELQPSLERFTLHLQDGGTLHVFCKRPGWIVATGGIRNH*
Ga0070707_1007123702	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MLNDLGIAGRGKQMTRVVETLKGEGTLVSSTARNIVTYHLEVVEETGIAPMSPSLRTIAGCVAILYSDLELQPSLERFTLHLQDGGTLQVFCKRPGWIVATGGIRND*
Ga0070707_1014725902	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VVETLKGEGKLVSSIAENILTYHLEVVEETGIAPMSPGLRTITGCVALLYSDLELQPSLERFTLHLQDGRRFQVFCKRPEWIVATGGIQND*
Ga0070698_1008387351	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MNDLGIAARGKQMTRVVETLRGEGTLVSSTAKDIVTYHLEVVEETGIAPMSPGLRTIAGCVAILYSDLELQPSLERFTLHLQDGRRLQVFCKRPGWIVATGGIRSD*
Ga0070698_1021252931	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSNFMHDLGIAARGKQMTRVVETLKGEGKLVRSMAENIVTYHLEVVEETGIAPTSSGLRTIAGCVVLLYTDLELQPSLEKFTLHLQDGRR
Ga0070697_1000263735	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MNDLGIAARGKQMTRVVETLKGEGTLVSSTAKDIVTYHLEVVEETGIAPMSPGLRTIAGCVAILYSDLELQPSLERFTLHLQDGRRLQVFCKRPGWIVATGGIQND*
Ga0070697_1007845351	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MLNDLGIAGRGKQMTRVVETLKGEGTLVSSTAKNIVTYHLEVVEETGIAPMSPSLRTIAGCVAILYSDLELQPSLERFTLHLQDGGTLHVFCKRPGWIVATGGIRNH*
Ga0066695_105646541	3300005553	Soil	MTRVVETLKGEGKLVRSMAENIVTYHLEVVEETGIAPTSSGLRTIAGCVTLLYTDLELQPSLEKSTLYLQDGRKLQVFCKRPGWIVATGGIRND*
Ga0066661_108921421	3300005554	Soil	MRKFMHDLGIAARGKQMTRVVETLKGEGRLVSSIAENIVTYHLEVIEETGIAPTSSGLRTIAGCVALLYSDLELQPSLQKFTLYLQDGGKLQVFCKRPGWIVATGGIRND*
Ga0066707_100667522	3300005556	Soil	MHDLGIAARGKQMTRVVETLKGEGKLVSSIAENILTYHLEVVEETGIAPMSPGLRTIAGCVALLYSDLELQPSLERFTLHLQDGRRFQVFCKRPEWIVATGGIQND*
Ga0066704_100665983	3300005557	Soil	MLDDLGIAGRGKQMTRVIETLKGEGKLVSSIAENIVSYHLEVVEEAGIAPKSPGLRTIAGCVALLYSDLELQPSLQKFTLYLQDGGKLQVFCKRPGWIVATGGIRND*
Ga0066704_101822654	3300005557	Soil	MLNDLGIAARGKQMTRVVETLRGEGTLLSSTARNIVTYHLEVVEETGIAPISPGLRTIAGCVALLYSDLELQPSLEKFTLHLQDGRRWQVFCKRPGWIVATGGIRND*
Ga0066704_106400051	3300005557	Soil	MTRVVETLKGEGKLVSSIAENILTYHLEVVEETGIAPMSPGLRTIAGCMALLYSDLELQPSLERFTLHLQDGRRFQVFCKRPEWIVATGGIQND*
Ga0066698_104036191	3300005558	Soil	MTRVVETLKGEGKLVSSIAENILTYHLEVVEETGIAPMSLGLRTIAGCVALLYSDLELQPSLERFTLHLQDGRRFQVFCKRPEWIVATGGIQND*
Ga0066698_110785211	3300005558	Soil	MRKFMFDDLGIAGRGKQMTRVIETLKGEGKLVSSIAENIVSYHLEVVEEAGIAPKSPGLRTIAGCVALLYSDLELQPSLQKFTLYLQDGGKLQVFCKRPGWIVA
Ga0066699_106485142	3300005561	Soil	MHDLGIAARGKQMTRVVETLKGEGRLVSSIAENIVTYHLEVIEETGIAPTSSGLRTIAGCVALLYSDLELQPSLERFTLHLKDGRNLQVFCKRPGWIVATGGIRND*
Ga0066691_106887472	3300005586	Soil	MRKLMHDLGIAARGKQMTRVVETLKGEGKLVRSMAENIVTYHLEVVEETGIAPTSSGLRTIAGCVTLLYTDLELQPSLEKFTLHLQDGRRLQVFCKRPGWIVATGGIRND*
Ga0066706_104904281	3300005598	Soil	MTRVVETLKGEGKLVRSMAENIVTYHLEVVEETGIAPTSPGLRTIAGCVALLYSDLELQPSLERFTLHLQDGRRFQVFCKRPEWIVATGGIQND*
Ga0066651_103056682	3300006031	Soil	MLNDLGITARGRQMTRVVETLKGEGKLVRSMAENIVTYHLEVVEETGIAPMSPGLKTIAGCVVLLYTDLELQPSLERFTLHLQDGRRLQVFCKRPGWIVATGGIRND*
Ga0070716_1000464702	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MLNDLGIAGRGKQMTRVVETLKGEGTLVSSTAKNIVTYHLEVVEETGIAPMSPSLRTIAGCVAILYSDLELQPSLERFTLHLQDGGTLHVFCKRPGWIVATDGIRNH*
Ga0066665_100961863	3300006796	Soil	MTRVVETLKGEGKLVSSIAENILTYHLEVVEETGIAPMSPGLRTIAGCVALLYSDLELQPSLERFTLHLQDGRRFQVFCKRPEWIVATGGIQND*
Ga0066659_111036062	3300006797	Soil	MTKLMHDLGIAARGKQMTRVVETLKGQGKLVRSMAENIVTYHLEVVEETGIASMRPGLRTIAGCVVLLYTDLELQPSLEKFTLHLQDGRRLQVFCKRPGWIVATGGIRND*
Ga0066710_1004250031	3300009012	Grasslands Soil	MFDDLGIAGRGKQMTRVIETLKGEGKLVSSIAENIVSYHLEVVEEAGIAPMSPGLRTIAGCVALLYSDLELQPSLQKFTLYLQDGGKLQVFCKRPGWIVATGGIRND
Ga0066709_1002205182	3300009137	Grasslands Soil	MTKLMHDLGIAARGQQMTRVVETLKGQGKLVRSMAENIVTYHLEVVEETGIASMRPGLRTIAGCVVLLYTDLELQPSLEKFTLHLQDGRRLQVFCKRPGWIVATGGIRND*
Ga0066709_1018389242	3300009137	Grasslands Soil	VETLKGEGKLVSSTAKNNVTYHLEVVEETGIASMSPGLRTIAGCVSLLYSDLELQPSLEKFTLHLQDGRRLQVFCKRPGWIVATGGIRND*
Ga0126380_114595921	3300010043	Tropical Forest Soil	MRKFMPDLGIAGRGKQLTRVIETLKGEGKLVSSMAEYIVNYHLEVIEEAGIAPMRSSSRTIAGCVTLLYSDLELQPSLERLTLHLQDGGKLQAFCKRPGWIVATAGIQND*
Ga0134088_101374041	3300010304	Grasslands Soil	TLRGEGKLVSSIAENIVTYHLEVVEETGITPMSPGLRTIAGCVALLYTDLELQPSLERFTLHLQDGRRLQVFCKRPGWIVATGGIRKD*
Ga0137388_109414071	3300012189	Vadose Zone Soil	MRRFMLNDLGITARGRQMTRVVETLKGEGKLVRSMAENIVTYHLEVVEETGIAPTSSGLRTIAGCVTLLYTDLELQPSLEKSTLYLQDGRKLQVFCKRPVWIVATGGIRND*
Ga0137383_100621724	3300012199	Vadose Zone Soil	MFNDLGITGRGKQMTRVIETLNGEGKLVSSIAENIVSYHLEVVEEAGIAPKSPGLRTIAGRVALLYSDLELQPSLQKFTLYLQDGGKLQVFCKRPGWIVATGGIRND*
Ga0137383_108302822	3300012199	Vadose Zone Soil	MSKFMHDLGIAARGKQMTRVVETLKGEGKLVRSMAENIVTYHLEVVEETGIAPTSSGLRTIAGCVTLLYTDLELQPSLEKSTLYLQDGRKLQVFCKRPGWIVATGGIRND*
Ga0137365_102377862	3300012201	Vadose Zone Soil	MFDDLGIAGRGKQMTRVIETLKGEGKLVSSIAENIVRYHLEVVEEAGIAPKSPGLRTIAGCVALLYSDLELQPSLQKFTLYLQDGGKLQVFCKRPGWVVATGGIRND*
Ga0137365_108662141	3300012201	Vadose Zone Soil	MRKLTHDLGIAGRGKQMTRVVETLKGEGKLVSSTAKNIVTYHLEIVEETGIAPRSPGLRTIAGCVALVYSDLELQPSLEKFTLHLQDGRRLQVFCKRPGW
Ga0137362_104829332	3300012205	Vadose Zone Soil	MSKFVHDLGIAARGKQMTRVVETLKGEGKLVRSMAENIVTYHLEVVEETGIAPTSPGLRTIAGCVALLYTDLELQPSLEKFTLHLQDGRRLQVFCKRPGWIVATDGIRND*
Ga0137362_106068203	3300012205	Vadose Zone Soil	MRRFMLNDLGIAARNKQMTRVVETLRGEGTLVSSTARNIVTYHLEVVEETGIAPMSPGLRTIAGCVALLYSDLELQPSLERFTLHLQDGGKLQVFCKRPGWIVATGGIRND*
Ga0137362_106194601	3300012205	Vadose Zone Soil	MHDLGIAARGKQMTRVVETLKGEGKLVRSMAENIVTYHLEVVEETGIASTSPGLRTIAGCVTLLYTDLELQPSLERFTLHLQDGRRLQVFCKRPGWIVATGGI
Ga0137362_113911282	3300012205	Vadose Zone Soil	MISALPVEAMQMTRVVETLRGEGKLVTSLAENIVTYHLEVVEETGIASMSAGLRTIAGCVTLLYMDLELQPSLERFTLHLQDGRKLQVVCKRPGWIVATGGIRND*
Ga0137380_103397012	3300012206	Vadose Zone Soil	DLGIAARGKQMTRVVETLKGEGKLVSSIAENILTYHLEVVEETGIAPMSPGLRTIAGCMALLYLDLELQPSLERFTLHLQDGRRLQVFCKRPEWIVATGGIQND*
Ga0137380_108088431	3300012206	Vadose Zone Soil	MRKLTHDLGIAGRGKQMTRVVETLRGEGKLVRSMAENIVTYHLEVVEETGITPMSPGLRTIAGCVALLYTDLELQPSLERFTLHLQEGRRLQVFCKRPGWIVATGGIRND*
Ga0137380_109445051	3300012206	Vadose Zone Soil	MRKLMHDLGIAARGKQMTRVVETLKGEGKLVRSMAENIVSYHLEVVEETGIAPTSSGLRTIAGCVSLLYTDLELQPSLEKFTLHLQDGRRLQVFCKRPGWIVATGGIRND*
Ga0137381_105454012	3300012207	Vadose Zone Soil	MRKLMHDLGIAARGRQMIRVVETLRGEGKLVSSIAENIVTYHLEVVEETGITPMSPGLRTIAGCVALLYTDLELQPSLERFTLHLQDGRRFQVFCKRPEWIVATGGIQND*
Ga0137379_100134651	3300012209	Vadose Zone Soil	MFNDLGITGRGKQMTRVIETLNGEGKLVSSIAENIVSYHLEVVEEAGIAPKSPGLRTIAGCVALLYSDLELQPSLQKFTLYLQDGGKLQVFCKRPGWIVATGGIRND*
Ga0137379_100288733	3300012209	Vadose Zone Soil	MLNDLGIAARGKQMTRVVETLKGEGKLVRSMAENIVSYHLEVVEETGIAPTSSGLRTIAGCVSLLYTDLELQPSLEKFTLHLQDGRRLQVFCKRPGWIVATGGIRND*
Ga0137379_101013663	3300012209	Vadose Zone Soil	MRKLMHDLGIAARGKQMTRVVETLKGEGKLIRSMAENIVTYHLEVVEETGIAPTSSGLRTIAGCVALLYTDLELQPSLERFTLHLQDGRRLQVFCKRPGWIVATGGIRND*
Ga0137379_104594592	3300012209	Vadose Zone Soil	MERVTLLAMHDLGIAARGRQMTRVVETLKGEGKLVSSIAENILTYHLEVVEETGIAPMSPGLRTIAGCVALLYSDLELQPSLERFTLHLQDGRRLQVFCK
Ga0137378_103514332	3300012210	Vadose Zone Soil	MERVTLLAMHDLGIAARGRQMTRVVETLKGEGKLVSSIAENILTYHLEVVEETGIAPMSPGLRTIAGCMALLYLDLELQPSLERFTLHLQDGRRLQVFCKRPEWIVATGGIQND*
Ga0137378_114138801	3300012210	Vadose Zone Soil	MKKLMHDLGIAARGKQMTRVVEILKGEGKLVCSMAENIVTYHLEVVEETGIAPTSSGLRTIAGCVALLYTDLELQPSLEKFTLHLQDGRRLQVFCK
Ga0137377_103686402	3300012211	Vadose Zone Soil	MRKLMHDLGIAARGKQMTRVVETLKGEGKLVRSMAENIVTYHLEVVEETGISPMSPGLRTIAGCVALLYTDLELQPSLEKFTLHLQDGRRLQVFCKRPGWIVATGGIRND*
Ga0137387_102898332	3300012349	Vadose Zone Soil	MLLWCGDEAAIHETRPQRTRRPILRLFSKFTRKKKLLELVDPCEARMRRFMLNDLGITARGRQMTRVVETLKGEGKLVRSMTENIVTYHLEVVEETGIAPTSSGLRTIAGCVTLLYADLELQPSLEKSTLYLQDGRKLQVFCKRPGWIVATGGIRND*
Ga0137387_106857201	3300012349	Vadose Zone Soil	MRKLMHDLGIAARGRQMIRVVETLRGEGKLVSSIAENIVTYHLEVVEETGITPMSPGLRTIAGCVALLYTDLELQPSLEKFTLHLQDGRRLQVF
Ga0137372_102062262	3300012350	Vadose Zone Soil	MRRFMLNDLGIAARGKQMTRVVETLKGEGKLVRSMAENIVTYHLEVVEETGIVPTSPGLRTIAGCVALLYTDLELQPSLEKFTLHLQDGRRLQVFCKRPGWIVATGGIRND*
Ga0137372_104405401	3300012350	Vadose Zone Soil	MFDDLGIAGRGKQMTRVIETLKGEGKLVSSIAENIVRYHLEVVEEAGIAPKSPGLRTIAGCVALLYSDLELQPSLQKFTLYLQDGGKLQVFCKRPGWIVATGGIRND*
Ga0137372_104620671	3300012350	Vadose Zone Soil	GEGKLVSSIAENILTYHLEVVEETGIAPMSPGLRTIAGCVALLYSDLELQPSLERFTLHLQDGRRFQVFCKRPEWIVATGGIQND*
Ga0137386_100316783	3300012351	Vadose Zone Soil	MERVTLLAMHDLGIAARGRQMTRVVETLKGEGKLVSSIAENILTYHLEVVEETGIAPMSPGLRTIAGCVALLYSDLELQPSLERFTLHLQDGRRLQVFCKRPEWIVATGGIQND*
Ga0137386_102064491	3300012351	Vadose Zone Soil	IAARGKQMTRVVETLKGEGKLVRSMAENIVTYHLEVVEETGIAPTSSGLRTIAGCVALLYTDLELQPSLERFTLHLQDGRRLQVFCKRPGWIVATGGIRND*
Ga0137367_111999622	3300012353	Vadose Zone Soil	VETLRGEGKLVSSIAENIVTYHLEVVEETGITPMSPGLRTIAGCVALLYTDLELQPSLEKFTLHLQDGRRLQVFCKRPGWIVATGGIRKD*
Ga0137366_103023033	3300012354	Vadose Zone Soil	MRKLMHDLGIAARGRQMIRVVETLRGEGKLVSSIAENIVTYHLEVVEETGITPMSPGLRTIAGCVALLYTDLELQPSLEKFTLHLQDGRRLQVFCKRPGWIVATGGIRKD*
Ga0137384_102193322	3300012357	Vadose Zone Soil	MERVTLLAMHDLGIAARGRQMTRVGETLKGEGKLVSSIAENILTYHLEVVEETGIAPMSPGLRTIAGCMALLYLDLELQPSLERFTLHLQDGRRLQVFCKRPEWIVATGGIQND*
Ga0137360_109848012	3300012361	Vadose Zone Soil	TRNLSSKNWTPNPPPFLEFTRNKKLPERVDPCEARMRRFMLNDLGIAGRGKQMTRVVETLKGEGELVSSTAKNIVTYHLEVVEETGIAPMSLGLRTIAGCVALLYSDLELQPSLERFTLHLQDGRRLQVFCKRPGWIVATGGIRND*
Ga0137361_101839572	3300012362	Vadose Zone Soil	MFDDLGIAGRGKQMTRVIETLKGEGKLVSSIAESIVSYHLEVVEEAGIAPKSPGLRTIAGCVALLYSDLELQPSLQKFTLYLQDGGKLQVFCKRPGWIVATGGIRND*
Ga0137361_102246861	3300012362	Vadose Zone Soil	MERVTLLALHDLGIAARGKQMTRVVETLKGEGKLVSSIAENILTYHLEVVEETGIAPMNPGLRAIAGCMALLYLDLELHPSLERFTLHLQDGRRLQVFFKRP
Ga0137361_107666662	3300012362	Vadose Zone Soil	MRRFMLNDLGIAGRGKQMTRVVETLKGEGELVSSTAKNIVTYHLEVVEETGIAPMSLGLRTIAGCVALLYSDLELQPSLERFTLHLQDGRRLQVFCKRPGWIVATVGIRND*
Ga0137358_110019381	3300012582	Vadose Zone Soil	MRRFMLNDLGIAARGKQMTRVVETLKGEGTLVRSMAENIVTYHLEVVEETGIAPTSSGLRTIAGCVDLLYTDLELQPSLERFTLHLQDGRRLQAFCKRPGWIVATGGIRND*
Ga0137397_104999532	3300012685	Vadose Zone Soil	MLNDLGIAARGKQMTRVVETLKGEGKLVSSIAENIVTYHLEVVEEAGIAPTRSGLRTIAGCVALLYSDLELQPSLERFTLHLQDGRRLQVFCKRPGWIVATGGIRND*
Ga0137394_102873763	3300012922	Vadose Zone Soil	AARGKQMTRVVETLKGEGKLVSSIAENIVTYHLEIVEETGIAPMSPGLRTIAGCVALLYSDLELQPSLERFTLHLQDGRRLQVFCKRPGWIVATGGIRND*
Ga0137359_100277255	3300012923	Vadose Zone Soil	MRRFMLNDLGIAGRGKQMTRVVETLKGEGELVSSTAKNIVTYHLEVVEETGIAPMSLGLRTIAGCVALLYSDLELQPSLERFTLHLQDGRRLQVFCKRPGWIVATGGIRND*
Ga0137359_101214693	3300012923	Vadose Zone Soil	HDLGIAARGKQMTRVVETLKGEGKLVRSMAENIVTYHLEVVEETGIAPTSPGLRTIAGCVALLYTDLELQPSLEKFTLHLQDGRRLQVFCKRPGWIVATDGIRND*
Ga0137404_100621121	3300012929	Vadose Zone Soil	MRKLMHDLGIAARGRQMTRVVETLKGEGKLVSSIAENIVTYHLEVVEESGITPTRSGLRTIAGCVALLYSDLELQPSLERFTLHLQDGRRLQVFCKRPGWIVATSGIRND*
Ga0137404_100737132	3300012929	Vadose Zone Soil	MVDDLGIAGRGKQMTRVIETLKGEGKLVSSIAESIVSYHLEVVEEAGIAPKSPGLRTIAGCVALLYSDLELQPSLQKFTLYLQDGGKLQVFCKRPGWIVATGGIRND*
Ga0137404_100930533	3300012929	Vadose Zone Soil	MRKLMHDLGIAARGRQMIRVVETLRGEGKLVSSIAENIVTYHLEVVEETGITPMSPGLRTIAGCVALLYTDLELQPSLERFTLHLQDGRRLQVFCKRPGWIVATGGIRKD*
Ga0137404_103843151	3300012929	Vadose Zone Soil	MTKFMHDLGIAARGKQMTRVVETLKGEGKLVRSMAENIVTYHLEVVEETGIVPTSPGLRTIAGCVTMLYSGLELQPSLERFTLYLQDGRRLQVFCKRPGWIVATGGIRKD*
Ga0137404_105324462	3300012929	Vadose Zone Soil	MRKLMHDLGIAARGKQMTRVVETLKGEGTLVSSTAKNIVTYHLEIVEETGIAPTSSGLRTIAGCVALLYTDLELQPSLEKFTLHLQDGRRLQVFCKRPGWIVATGGIRND*
Ga0137404_109643502	3300012929	Vadose Zone Soil	MRKFMLDDLGIAGRGKQMTRVIETLKGEGKLVSSIAENIVSYHLEVVEEAGIAPMSPGLRTIAGCVALLYSDLELQPSLQKFTLYLQDGGKLQVFCKRPGWIVATGGIRND*
Ga0134076_104405121	3300012976	Grasslands Soil	MTRVVETLKGEGTLVSSIAENILTYHLEVVEETGIAPMSPGLRTIAGCMALLYSDLELQPSLERFTLHLQDGRRLQVFCKRPEWIVATGGIQNDYRISLIRCPTAA
Ga0134079_105351661	3300014166	Grasslands Soil	PFLEFTRKKKRPEHVDPCEARMRRFMLNDLGITARGRQMTRVVETLKGEGKLVRSMAENIVTYHLEVVEETGIAPTSSGLRTIAGCVTLLYTDLELQPSLEKSTLYLQDGRKLQVFCKRPGWIVATGGIRND*
Ga0137405_11202111	3300015053	Vadose Zone Soil	MRRFMLNDLELAARGKQMTRVVETLKGEGKVVRSMAENIVTYHWEVVEETGIAPTSSGLRTIAGCLALLYTDLELQPSLEKFTLHLQDGR
Ga0137403_1001201611	3300015264	Vadose Zone Soil	MRKFMHDLGIAARGKQMTRVVETLKGEGKLVRSMAENIVTYHLEVVEETGIAPTSPGLRTIAGCVALLYTDLELQPSLEKFTLHLQDGRRLQVFCKRPGWIVATDGIRND*
Ga0137403_100525523	3300015264	Vadose Zone Soil	MRRFMLNDLELAARGKQMTRVVETLKGEGKVVRSMAENIVTYHWEVVEETGIAPTSSGLRTIAGCLALLYTDLELQPSLEKFTLHLQDGRRLQVFCKRPGWIVATGGIRND*
Ga0066655_103445722	3300018431	Grasslands Soil	MRKFMFDDLGIAGRGKQMTRVIETLKGEGKLVSSIAENIVSYHLEVVEEAGIAPKSPGLRTIAGCVALLYSDLELQPSLQKFTLYLQDGGKLQVFCKRPGWIVATGGIRND
Ga0137408_10531375	3300019789	Vadose Zone Soil	MFDDLGIAGRGKQMTRVIETLKGEGKLVSSIAESIVSYHLEVVEEAGIAPKSPGLRTIAGCVALLYSDLELQPSLQKFTLYLQDGGKLQVFCKRPGWIVATGGIRND
Ga0207684_100392865	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MNDLGIAARGKQMTRVVETLRGEGTLVSSTAKNIVTYHLEVVEETGIAPMSPGLRTIAGCVAILYSDLELQPSLERFTLHLQDGRRLQVFCKRPGWIVATGGIRSD
Ga0207684_105910662	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRKFMFDDLGIAGRGKQMTRVIETLKGEGKLVSSIAENIVSYHLEVVEEAGIAPKSPGLRTIAGCVALLYSDLELQPSLQKFTLYLQDGGKLQVF
Ga0207646_100844133	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MFDDLGIAGRGKQMTRVIETLKGEGKLVSSIAENIVSYHLEVVEEAGIAPKSPGLRTIAGCVALLYSDLELQPSLQKFTLYLQDGGKLQVFCKRPGWIVATGGIRND
Ga0207646_106286051	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	RKKKLPERVDPCEARMRRFMLNDLGIAGRGKQMTRVVETLKGEGTLVSSTARNIVTYHLEVVEETGIAPMSPSLRTIAGCVAILYSDLELQPSLERFTLHLQDGGTLQVFCKRPGWIVATGGIRND
Ga0207646_107912262	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTKFMHDLGIAARGKQMTRVVETLKGEGKLVRSMAENIVTYHLEVVEETGIAPMSPGLRTIAGCVTLLYTDLELQPSLEKFTLHLQDGRRLQVFCKRPGWIVATGGIRND
Ga0207665_101247632	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MLNDLGIAGRGKQMTRVVETLKGEGTLVSSTAKNIVTYHLEVVEETGIAPMSPSLRTIAGCVAILYSDLELQPSLERFTLHLQDGGTLHAFCKRPGWIVATDGIRNH
Ga0209160_12714251	3300026532	Soil	DLGIAGRGKQMTRVIETLKGEGKLVSSIAENIVSYHLEVVEEAGIAPKSPGLRTIAGCVALLYSDLELQPSLQKFTLYLQDGGKLQVFCKRPGWIVATGGIRND
Ga0209056_107025251	3300026538	Soil	MTRVVETLKGEGKLVSSIAENILTYHLEVVEETGIAPMSPGLRTIAGCVALLYSDLELQPSLERFTLHLQDGRRFQVFCKRPEWIVATGGIQND
Ga0209689_11549042	3300027748	Soil	MRKFMFDDLGIAGRGKQMTRVIETLKGEGKLVSSIAENIVSYHLEVVEETGIAPTSPGLRTIAGCVALLYSDLELQPSLERFTLHLQDGRRLQVFCKRPGWIVATGGIRND
Ga0307469_111206391	3300031720	Hardwood Forest Soil	MLNDLGIAGRGKQMTRVVETLKGEGTLVSSTAKNIVTYHLEVVEETGIAPMSPSLRTIAGCVAVLYSDLELQPSLERFTLHLQDGGTLHVFCKRPGWIVATGGIRNH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103805

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences