Metagenome / Metatranscriptome Family F103823

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103823
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	64 residues
Representative Sequence	MSVNMQSTKHAKWTTRVWRTLAALDEAISVSPMEHLEKRIAVLEQKLWAGSEPPRTHKESKPGQSV
Number of Associated Samples	85
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.27 %
% of genes near scaffold ends (potentially truncated)	34.65 %
% of genes from short scaffolds (< 2000 bps)	95.05 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.317 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.852 % of family members)
Environment Ontology (ENVO)	Unclassified (31.683 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.317 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.03% β-sheet: 0.00% Coil/Unstructured: 46.97%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF01047	MarR	18.81
PF00106	adh_short	12.87
PF13561	adh_short_C2	4.95
PF02082	Rrf2	2.97
PF07690	MFS_1	1.98
PF08238	Sel1	0.99
PF13683	rve_3	0.99
PF09351	DUF1993	0.99
PF00561	Abhydrolase_1	0.99
PF07859	Abhydrolase_3	0.99
PF00529	CusB_dom_1	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	2.97
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	2.97
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	2.97
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	2.97
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	2.97
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	2.97
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	2.97
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	2.97
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.32 %
Unclassified	root	N/A	31.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.32 %
Unclassified	root	N/A	31.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.32 %
Unclassified	root	N/A	31.68 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	54.46 %
Unclassified	root	N/A	31.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	46.53 %
Unclassified	root	N/A	31.68 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.98 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	37.62 %
Unclassified	root	N/A	31.68 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.68 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	25.74 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.68 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	25.74 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.68 %
Bradyrhizobium cenepequi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	19.80 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.98 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig54702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	839	Open in IMG/M
2166559006\|FI_contig12371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	928	Open in IMG/M
2170459003\|FZN2CUW02FTKV4	Not Available	517	Open in IMG/M
2170459003\|FZN2CUW02GY9DX	Not Available	516	Open in IMG/M
2199352025\|deepsgr__Contig_34428	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300002245\|JGIcombinedJ26739_101165456	All Organisms → cellular organisms → Bacteria → Proteobacteria	659	Open in IMG/M
3300003505\|JGIcombinedJ51221_10061308	All Organisms → cellular organisms → Bacteria	1450	Open in IMG/M
3300004080\|Ga0062385_10629393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300004268\|Ga0066398_10149548	Not Available	585	Open in IMG/M
3300004633\|Ga0066395_10747900	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	583	Open in IMG/M
3300005163\|Ga0066823_10092622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	609	Open in IMG/M
3300005332\|Ga0066388_100392454	All Organisms → cellular organisms → Bacteria	2034	Open in IMG/M
3300005435\|Ga0070714_102447694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	507	Open in IMG/M
3300005436\|Ga0070713_101529152	Not Available	648	Open in IMG/M
3300005444\|Ga0070694_101673848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	541	Open in IMG/M
3300005457\|Ga0070662_100804683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	799	Open in IMG/M
3300005713\|Ga0066905_101094216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	707	Open in IMG/M
3300005764\|Ga0066903_101089527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	1471	Open in IMG/M
3300005764\|Ga0066903_104029989	Not Available	787	Open in IMG/M
3300005764\|Ga0066903_108949187	Not Available	507	Open in IMG/M
3300006028\|Ga0070717_11871108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	542	Open in IMG/M
3300006049\|Ga0075417_10677529	Not Available	529	Open in IMG/M
3300006052\|Ga0075029_100276958	Not Available	1066	Open in IMG/M
3300006172\|Ga0075018_10313245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	777	Open in IMG/M
3300006174\|Ga0075014_100191334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1026	Open in IMG/M
3300006175\|Ga0070712_100824837	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300006175\|Ga0070712_101149547	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300006854\|Ga0075425_101409688	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300006893\|Ga0073928_10687843	Not Available	714	Open in IMG/M
3300009551\|Ga0105238_12167080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	590	Open in IMG/M
3300009553\|Ga0105249_10992959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	908	Open in IMG/M
3300009792\|Ga0126374_10010701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3600	Open in IMG/M
3300010043\|Ga0126380_10282568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1170	Open in IMG/M
3300010046\|Ga0126384_12291680	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300010047\|Ga0126382_11722623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	586	Open in IMG/M
3300010048\|Ga0126373_11348908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	779	Open in IMG/M
3300010154\|Ga0127503_10271139	Not Available	1460	Open in IMG/M
3300010358\|Ga0126370_10112358	All Organisms → cellular organisms → Bacteria → Proteobacteria	1912	Open in IMG/M
3300010366\|Ga0126379_13812507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	505	Open in IMG/M
3300010398\|Ga0126383_13323046	Not Available	525	Open in IMG/M
3300010403\|Ga0134123_13235325	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300010860\|Ga0126351_1125839	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300010863\|Ga0124850_1056087	Not Available	1226	Open in IMG/M
3300011120\|Ga0150983_15790199	Not Available	701	Open in IMG/M
3300011271\|Ga0137393_10796450	Not Available	808	Open in IMG/M
3300012177\|Ga0153943_1133984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	539	Open in IMG/M
3300012180\|Ga0153974_1006108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2520	Open in IMG/M
3300012205\|Ga0137362_10357844	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1264	Open in IMG/M
3300012208\|Ga0137376_11446919	Not Available	578	Open in IMG/M
3300012210\|Ga0137378_11484993	Not Available	589	Open in IMG/M
3300012363\|Ga0137390_11687789	Not Available	568	Open in IMG/M
3300012948\|Ga0126375_11298184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	611	Open in IMG/M
3300012951\|Ga0164300_10315398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	824	Open in IMG/M
3300012955\|Ga0164298_10615934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	748	Open in IMG/M
3300012957\|Ga0164303_10098263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1442	Open in IMG/M
3300012957\|Ga0164303_10798138	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300012957\|Ga0164303_11380713	Not Available	526	Open in IMG/M
3300012958\|Ga0164299_10512093	Not Available	801	Open in IMG/M
3300012958\|Ga0164299_10706697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	706	Open in IMG/M
3300012958\|Ga0164299_10719619	Not Available	701	Open in IMG/M
3300012960\|Ga0164301_10062268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1981	Open in IMG/M
3300012971\|Ga0126369_11560182	Not Available	750	Open in IMG/M
3300012971\|Ga0126369_12811946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	570	Open in IMG/M
3300012985\|Ga0164308_11710280	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300012987\|Ga0164307_11673728	Not Available	539	Open in IMG/M
3300016270\|Ga0182036_11818234	Not Available	516	Open in IMG/M
3300016341\|Ga0182035_10316694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1285	Open in IMG/M
3300016341\|Ga0182035_11854307	Not Available	546	Open in IMG/M
3300016387\|Ga0182040_10175023	All Organisms → cellular organisms → Bacteria → Proteobacteria	1555	Open in IMG/M
3300016387\|Ga0182040_10242072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1351	Open in IMG/M
3300016404\|Ga0182037_10582039	Not Available	948	Open in IMG/M
3300016422\|Ga0182039_10454023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1098	Open in IMG/M
3300016445\|Ga0182038_10853998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	800	Open in IMG/M
3300016445\|Ga0182038_10958780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	756	Open in IMG/M
3300017970\|Ga0187783_10594075	Not Available	801	Open in IMG/M
3300020579\|Ga0210407_10363956	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300020579\|Ga0210407_10536353	Not Available	914	Open in IMG/M
3300020581\|Ga0210399_11090392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	639	Open in IMG/M
3300021181\|Ga0210388_10716503	All Organisms → cellular organisms → Bacteria → Proteobacteria	871	Open in IMG/M
3300021401\|Ga0210393_11462415	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300021432\|Ga0210384_10272060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1525	Open in IMG/M
3300021560\|Ga0126371_10189332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2147	Open in IMG/M
3300021560\|Ga0126371_10668399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	1187	Open in IMG/M
3300025915\|Ga0207693_10236201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1435	Open in IMG/M
3300025915\|Ga0207693_10579305	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300025929\|Ga0207664_10312525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	1385	Open in IMG/M
3300025932\|Ga0207690_10703575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	831	Open in IMG/M
3300027783\|Ga0209448_10212286	Not Available	641	Open in IMG/M
3300027874\|Ga0209465_10364102	Not Available	724	Open in IMG/M
3300029701\|Ga0222748_1099784	Not Available	564	Open in IMG/M
3300030730\|Ga0307482_1132659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	712	Open in IMG/M
3300031057\|Ga0170834_110916856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1519	Open in IMG/M
3300031231\|Ga0170824_101277060	Not Available	513	Open in IMG/M
3300031231\|Ga0170824_111982415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1697	Open in IMG/M
3300031744\|Ga0306918_10095628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2103	Open in IMG/M
3300031879\|Ga0306919_10805965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	722	Open in IMG/M
3300031910\|Ga0306923_11969716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	594	Open in IMG/M
3300031912\|Ga0306921_10626521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1242	Open in IMG/M
3300032076\|Ga0306924_10648012	Not Available	1191	Open in IMG/M
3300032174\|Ga0307470_10231639	All Organisms → cellular organisms → Bacteria → Proteobacteria	1206	Open in IMG/M
3300032261\|Ga0306920_101801365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	864	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.09%
Host-Associated	Host-Associated	7.92%
Engineered	Engineered	0.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.16%
Aquatic	Environmental → Aquatic	6.93%
Plants	Host-Associated → Plants	5.94%
Fungi	Host-Associated → Fungi	1.98%
Modeled	Engineered → Modeled	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.94%
Freshwater	Environmental → Aquatic → Freshwater	2.97%
Sediment	Environmental → Aquatic → Sediment	2.97%
Mycelium	Host-Associated → Fungi → Mycelium	1.98%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.99%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.38%
Loam	Environmental → Terrestrial → Soil → Loam	20.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.98%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.98%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.99%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.99%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.99%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.98%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.99%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.99%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.99%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.95%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.97%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	2.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.97%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.98%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.98%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.99%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.99%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.99%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.99%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012177	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ027 MetaG	Host-Associated	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0702.00003660	2166559005	Simulated	MSVNMQSTKHAKWTTRLWRTLAALDEAISVSAMEHLEKRIAVLEQKLWDGSEPPRTHKESKPGQSV
FI_00120980	2166559006	Grass Soil	MNVSMQSTKRAKWTTRMWRTLAALDEAISARPMEHLEKRVAAVEQEVLARSEPPRTHKESKPGQSL
E4A_00180800	2170459003	Grass Soil	MSVNMQSTKHAKWTTRLWRTLAALDEAISVSAMEHLEKRIAILEQKLWDGSEPPRTHKESKPGQSV
E4A_02730230	2170459003	Grass Soil	MSVNMRSTKHAKWTTRLWRTLAALDEAISVSAMEHLEKRIAVLEQKLWDGSEPPRTHKESKPGQSV
deepsgr_00211430	2199352025	Soil	MNVNMQSTRHAKWTTRMWQTLAVLDEAISVSPMEHLEKRIAALEQKVWAGSEPPRTHKESKPGRSI
JGIcombinedJ26739_1011654562	3300002245	Forest Soil	MEVPMSVNMQSTKHAKWTTRLWRTLAALDEAISVSAMEHLEKRIAVLEQKLWDG
JGIcombinedJ51221_100613082	3300003505	Forest Soil	MSVNMQSTKHAKWTTRLWRTLAALDEAISVSAMEHLEKRIAVLEQKLWDGSEPPRTHKESKPGQSV*
Ga0062385_106293931	3300004080	Bog Forest Soil	MSVNMQSTKHAKWTTRLWRTLAALDEAISVSAMEHLEKRIAVLEQKLWDGSEPPRTHKESKLGRV*
Ga0066398_101495481	3300004268	Tropical Forest Soil	MSVNMQSTKHTKWTTRMWRTLAALDEASPMEHVQKRIAALEQKAGAGREPP
Ga0066395_107479001	3300004633	Tropical Forest Soil	MSVNMQSTKQAKWTTRVWRTLAALDEAISVSPMEHLEKRIAVLEQKLWAGSEPPRTHKESKPGQSV*
Ga0066823_100926221	3300005163	Soil	MSVNMQSTKHAKWTTRLWRTLAALDEAISVSAMEHLEKRIAVLEQ
Ga0066388_1003924542	3300005332	Tropical Forest Soil	MNVNMQSTKPAKWTTRMWRTLAALDEAFSAGPMEHLEKRIAALEQEVSAGSEPPRTHKVSKPGQSDSESGVFCDAQPGA*
Ga0070714_1024476942	3300005435	Agricultural Soil	MSVNMQSTKHAKWTTRLWRTLAALDEAISVSAMEHLEKRIAVLEQKLWDGSEPPRTHKESKPG
Ga0070713_1015291522	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSVNMQSTKPAKWTTRLWRTLAALDEAISVSAMEHLEKRIAVLEQKLWDGSEPPRTHKESKPGQSV*
Ga0070694_1016738482	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MNVNMQSTKHAKWTTRMWQILAALDEGISVSTMEHLEKRIAALEQEVWAGSEPPHTHKESKPGQSV*
Ga0070662_1008046831	3300005457	Corn Rhizosphere	MSVNMQSTKHAKWTTRVWRTLAALDEAISVSPTEHLEKRIAVLEQKLWAESEPPRTHKESKPGQSV*
Ga0066905_1010942162	3300005713	Tropical Forest Soil	MNVNMQSTKHAKWTTPMWRTLAALDEAISVSPMEHLEKRIAALEQEV*
Ga0066903_1010895271	3300005764	Tropical Forest Soil	MSVNMQSTKHAKWTTRVWRTLAALDEAISVSPMEHLEKRIAVLEQKLWA
Ga0066903_1040299892	3300005764	Tropical Forest Soil	LQSTKQAKWTTRVWRTLAALDEAISVSPMEHLEKRIAVLEQKLW
Ga0066903_1089491872	3300005764	Tropical Forest Soil	MSVNMQSTKQAKWTTRVWRTLAALDEAISVSPMERLEKRIAVLEQKLWAGSEPPRTHKESKPGQSV*
Ga0070717_118711081	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSVNMQSTKHAKWTTRLWRTLAALDEAISVSPMENLEKRIAVLEQKLWAESEPPRTHKESKPGQSV*
Ga0075417_106775292	3300006049	Populus Rhizosphere	MEVLMNVNMQSTKHAKWTTRVWRTLAALDEAISVSPTEHLEKRIAVLEQKLWAESEPPRTHKESKPGQSV*
Ga0075029_1002769581	3300006052	Watersheds	MSVNMQSTKHAKWTTRLWRTLAALDEAISVSAMEHLEKRIAVLEQKLWNGSEPPRTHKESKPGQSV*
Ga0075018_103132453	3300006172	Watersheds	MNVNMQSTRHAKWTTRMWQTLAVLDEAISVSPMEHLEKRIAALEQKVWAGS
Ga0075014_1001913341	3300006174	Watersheds	MSVNMQSSKHAKWTTRLWRTLAALDEAISVSPMEHLEKRIAVLEQKLW
Ga0070712_1008248372	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MNVNMQSTRHAKWTTRMWQTLAVLDEAISVSPMEHLEKRIAALEQKVWAGSEPPRTHKESKPG
Ga0070712_1011495471	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSVNMQSTKHAKWTTRLWRTLAALDEAISVSAMEHLEKRIAVLEQKLWDGSELPRTHKESKPRQSV*
Ga0075425_1014096882	3300006854	Populus Rhizosphere	MNVNMQSTRQAKWTTRMWQTLAALDEAISVSPMEHLEKRIAALEQKVWAGSEPPRTHKESKPGQSV*
Ga0073928_106878431	3300006893	Iron-Sulfur Acid Spring	AHMEVPMSVNMQSTKHAKWTTRLWRTLAALDEAISVSAMEHLEKRIAVLEQKLWDGSEPPRTHKESKPGQSV*
Ga0105238_121670801	3300009551	Corn Rhizosphere	MEVPMSVNMQSTKHAKWTTRVWRTLAALDEAISVSPTEHLEKRIAVLEQKLWAESEPPRTHKESKAGQSV*
Ga0105249_109929592	3300009553	Switchgrass Rhizosphere	MSVNIQSTKHAKWKTRLWRTLAALDEAISVSAMEHLEKRIAVLEQKLWDGSEPPRTHKESKPGQSV*
Ga0126374_100107013	3300009792	Tropical Forest Soil	MEVPMSVNMQSTKQAKWTTRVWRTLAALDEAISVSPMEHLEKRIAVLEQKLWAGSEPPRTHKESKPGQSV*
Ga0126380_102825683	3300010043	Tropical Forest Soil	MEVPMSVNMQSTKQAKWTTRVWRTLAALDEAISVSPMERLEKRIAVLEQKLWAGSEPPRT
Ga0126384_122916801	3300010046	Tropical Forest Soil	MEVPMSVNMQSTKHAKWTTRVWRTLAALDEAISVSPMEHLQKRIAVLEQKLWAGSEPPRTHKKSKAGT*
Ga0126382_117226232	3300010047	Tropical Forest Soil	MEIPMSVNMQSTKQAKWTTRVWRTLAALDEAISVSPMEHLEKRIAVLEQKLWAGSEPPRTHKES
Ga0126373_113489082	3300010048	Tropical Forest Soil	MSVNMQSTKHAKWTTRVWRTLAALDEAISVSPMEHLEKRIAVLERKLWAGSEPPRTHKESKPGQSV*
Ga0127503_102711391	3300010154	Soil	PLWQQIMEVPMSVNMQSTKHTKWTTRMWRTLAALGEAIDVSPMEHLEKRIAALEQKVWAENEPPRTHKESKPGQSV*
Ga0126370_101123582	3300010358	Tropical Forest Soil	MEVPMSVNMQSTKQAKWTTRVWRTLAALDEAISVSPMERLEKRIAVLEQKLWAGSEPPRTHKESKPGQSV*
Ga0126379_138125072	3300010366	Tropical Forest Soil	MSVNMQSTKHAKWTTRVWRTLAALDEAISVSPMEHLEKRIAVLERKLWA
Ga0126383_133230461	3300010398	Tropical Forest Soil	MEVPMSVNMQSTKHTKWTTRMWRTLAALDEASPMEHVQKRIAALEQKAGAGREPPRNQMESKPGQTTRGRLADKN
Ga0134123_132353251	3300010403	Terrestrial Soil	MEVPMSVNMQSTKHAKWTTRLWRTLAALDEAISVSAMEHLEKRIAVLEQKLWDGSEPPRTHKESKPGQSV*
Ga0126351_11258391	3300010860	Boreal Forest Soil	MEVPMSVNMQSTKHAKWTTRLWRTLAALDEAISVSAMEHLEKRIAVLEQK
Ga0124850_10560872	3300010863	Tropical Forest Soil	MEVPMSVNMQSTKQAKWTTRVWRTLAALDEAISVSPMEHLEKRIAVLEQKLWAGSEPPRTHKESKPGQSESGVTDTDMFNLKE*
Ga0150983_157901992	3300011120	Forest Soil	MEVPMSVNMQSTKHTKWTTRMWRTLAALGEAIDVSPMEHLEKRIAALEQKVWAENEPPRTHKESKPGQSV*
Ga0137393_107964501	3300011271	Vadose Zone Soil	MEVPMNVNMQSTKHAKWTTRMWQTLAAFDEVMSVSPMEHLEKRIAALEQKVWAGSEPPRTHKESKPGQSI*
Ga0153943_11339842	3300012177	Attine Ant Fungus Gardens	MSVNMQSTKHAKWTTRLWRTLAALDEAISVSAMEHLEKRIAVLEQKLWDRSEPPRTHKESKPGQSV*
Ga0153974_10061082	3300012180	Attine Ant Fungus Gardens	MSVNMQSTKHAKWTTRLWRTLAALDQAISVSPMEHLEKRIAVLEQKLWAGSEPRTHEESKPGQIV*
Ga0137362_103578442	3300012205	Vadose Zone Soil	MSVNMQSTKHTKWTTRMWRTLTALDEAISVSPMEHLQKRIAVLEQKVGAGSEPPRNQMESKPGQSV*
Ga0137376_114469191	3300012208	Vadose Zone Soil	MEVPMSVNMQSTKHTKWTTRMWRTLAALDEAISVSPMEHLQKRIAVLEQKVGAGSEPPRNQMESKPGQSV*
Ga0137378_114849932	3300012210	Vadose Zone Soil	MEVPMSVNMQSTKHTKWTTRMWRTLAALDEAISVSPMEHLQKRIAVLEQKVGAGSE
Ga0137390_116877891	3300012363	Vadose Zone Soil	EVPMNVNMQSTKHAKWTTRMWQTLAAFDEVMSVSPMEHLEERIAALEQKVWAGSEPPRTHKESKPGQSI*
Ga0126375_112981841	3300012948	Tropical Forest Soil	MNVNMQSTKHAKWTTPMWRTLAALDEAISVSPLEHLEKRIAALEQEV*
Ga0164300_103153982	3300012951	Soil	MNVNMQSTKHAKWTTRLWRTLAALDEAISVSAMEHLEKRIAVLEQKLWDGSEPPRTHKESKPGQSV*
Ga0164298_106159342	3300012955	Soil	MSVNMQSTKHAKWTTRLWRTLAALDEAISVSAMEHLEKRIAVLEQKLWDGREPPRTHKESKPGQSV*
Ga0164303_100982633	3300012957	Soil	MSVNMQSTKHAKWTTRLWRTLAALDEAISVSAMEHPEKRIAVLEQKLWDGSEPPRTHKESKPGQSV*
Ga0164303_107981382	3300012957	Soil	MEVPMSVNMQSTKHTKWTTRMWRTLAALGEAIDVSPMEHLEKPIAALEQKVWA
Ga0164303_113807131	3300012957	Soil	MEVPMSVNVQSTKHAKWTTGLWRTLAALDEAISVSPMEHLQKRIAVLEQKVGAGSEPPRNQMESKPGQSV*
Ga0164299_105120932	3300012958	Soil	EVPMSVNMQSTKHAKWTTRPWRTLAALDEAISVGAMEHLEKRIAVLEQKLWDGSEPPRTHKESKPGQSV*
Ga0164299_107066972	3300012958	Soil	MEVPMSVNMQSTKHTKWTTRMWRTLAALGEAIDVSPMEHLEERIAALEQKVWAENEPPRTHKESKPGQSV*
Ga0164299_107196191	3300012958	Soil	MEVPMSVNMQSTKHAKWTTGLWRTLAALDEAIGVSPMEHLEKRIAVLEKKLWAGSEPPRTHEESKPGQS
Ga0164301_100622681	3300012960	Soil	NMQSTKHAKWTTRMWQILAALDEGISVSTMEHLEKRIAALEQEVWAGSEPPHTHKESKPGQSV*
Ga0126369_115601822	3300012971	Tropical Forest Soil	AKWTTRVWRTLAALDEAISVSPMEHLEKRIAVLEQKLWAGSEPPRTHKESKPGQSV*
Ga0126369_128119461	3300012971	Tropical Forest Soil	MEVPMSVNMQSTKQAKWTTRVWRTLAALDEAISVSPMEHLEKRIAVLEQKLWAG
Ga0164308_117102802	3300012985	Soil	MEVPMNVNMQSTKHAKWTTRMWQILAALDEGISVSTMEHLEKPIAALEQEVWAGSEPPHT
Ga0164307_116737281	3300012987	Soil	MSVNMQSTKHTKWTTRMWRTLAALDEAISVSPTEHLEKRIAVLEQKLWAESEPPRTHKESKPGQSV*
Ga0182036_118182341	3300016270	Soil	MEVLMSVNMQPTKHAKWTTRLWRTLAALDEAISVSPMKHLEKRIAVLEQKLWAGSEPPRAHKKSKPGQDV
Ga0182035_103166942	3300016341	Soil	MSVNMQSTKHAKWTTRVWRTLAALDEAISVSPMEHLEKRIAVLEQKLRAGSEPRCTHKESKPGQSV
Ga0182035_118543071	3300016341	Soil	MSVNMQSTKHAKWTTRVWRTLAALDEAIRVTPIEHLEKRIAVLEQKLWAGSEPPRAHKESKPGQSV
Ga0182040_101750234	3300016387	Soil	MSVNMRSTKHAKWTTRVWRTLAALNEALSISPMEHLEKRIAVLEQKVWAESEPPRTHKESMPGQSV
Ga0182040_102420723	3300016387	Soil	MSVNMQSTKHAKWTTRVWRILAALDEAISVSPMEHLEKRIAVLEQKLWAGSEPPNRHGHV
Ga0182037_105820392	3300016404	Soil	HIYVSAVRMEVPMSVNMQSTKHAKWTTPVWRTLAALNEAISISPMEHLEKRIAVLEQKLRAGSEPRCTHKESKPGQSV
Ga0182039_104540232	3300016422	Soil	MSVNMQSTKHAKWTTRVWRTLAALNEAISISPMEHLEKRIAVLEQKLRAGSEPRCTHKESKPGQSV
Ga0182038_108539981	3300016445	Soil	MSVNMQSTKQAKWTTRVWRTLAALDEAISVSPTEHLEKRVAVLEQKLRAGSEPPRAHKE
Ga0182038_109587802	3300016445	Soil	MSVNMQSTKHAKWTTRVWRTLAALSEAISISPMEHLEKRIAVLEQKLRAGSEPRCTHKESKPGQSV
Ga0187783_105940751	3300017970	Tropical Peatland	MSANMQSTKHAKWTTRVWRTLAALDEAISTTPMEDLEKRIAVLEQKLLAGSEPPRTHKVSKPSQSV
Ga0210407_103639563	3300020579	Soil	MSVNMQSTKHTKWTTRMWRTLAALGEAIDVSPMEHLEKRIAALEQKVWAENEPPRTHK
Ga0210407_105363531	3300020579	Soil	MSVNMQSTKHAKWTTRMWQILAALDEAISVSTMEHLEKRIAALEQKVWAGSEPPRTHKESKPGQSV
Ga0210399_110903922	3300020581	Soil	MSVNMQSTKHAKWTTRLWRTLAALDEAISVSAMEHLEKRIAVLEQKLWDGSEPPLSLNAR
Ga0210388_107165032	3300021181	Soil	MSVNMQSTKHAKWTTRMWQILAALDEGISVSTMEHLEKRIAALEQKVWAENEPPRTHKESKPGQSV
Ga0210393_114624151	3300021401	Soil	MSVNMQSTKHTKWTTRMWRTLAALGEAIDVSPMEHLEKRIAALEQKVWAENEPPRTHKESKPGQSV
Ga0210384_102720602	3300021432	Soil	MSVNMQSTKHTKWTTRMWRTLAALGEAIDVSPMEHLEKRIAALEQKVWAESEPPRTHKESKPGQSV
Ga0126371_101893323	3300021560	Tropical Forest Soil	MSVNMQSTKQAKWTTRVWRTLAALDEAISVSPMERLEKRIAVLEQKLWAGSEPPRTHKESKPGQSV
Ga0126371_106683993	3300021560	Tropical Forest Soil	MSVNMQSTKHAKWTTRVWRTLAALDEAISVSPMEHLEKRIAVLEQKLWAGSEPPRTHKESKPGQSV
Ga0207693_102362013	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSVNMQSTKHAKWTTRLWRTLAALDEAISVSAMKHLEKRIAVLEQKLWDGREPPRTHKESKPGQ
Ga0207693_105793052	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MNVNMQSTKHTKWTTRMWQILAALDEGISVSTMEHLEKRIAALEQKVWAGSEPPRTHKESKPGRSI
Ga0207664_103125254	3300025929	Agricultural Soil	MSVNMQSTKHAKWTTRLWRTLAALDEAISVSAMEHLEKRIAVLEQKLWDGS
Ga0207690_107035752	3300025932	Corn Rhizosphere	MSVNMQSTKHAKWTTRVWRTLAALDEAISVSPTEHLEKRIAVLEQKLWAESEPPRTHKESKPGQSV
Ga0209448_102122861	3300027783	Bog Forest Soil	MSVNMQSTKHAKWTTRLWRTLAALDEAISVSAMEHLEKRIAVLEQKLWDGSEPPRTHKESKLGRV
Ga0209465_103641021	3300027874	Tropical Forest Soil	KWTTRVWRTLAALDEAISVSPMERLEKRIAVLEQKLWAGSEPPRTHKESKPGQSV
Ga0222748_10997842	3300029701	Soil	MEVPMSVNMQSTKHAKWTTRLWRTLAALDEAISVSAMEHLEKRIAVLEQKLWDGSEPPRTHKESKPGQSV
Ga0307482_11326592	3300030730	Hardwood Forest Soil	MSVNMQSTKHAKWTTRLWRTLAALDKAISVSAMEHLEKRIAVLEQKLWGGS
Ga0170834_1109168563	3300031057	Forest Soil	MSVNMQSTKHAKWTTRMWQILAALDEGISVSTMEHLEKRIAALEQKVWAGSEPPRTHKESKPGRSI
Ga0170824_1012770601	3300031231	Forest Soil	MNVNMQSTKHAKWTTRMWRALAALAEAISVSPMEDLEMRIAALEQEVRAGSEPPRTRKEAKPGKSA
Ga0170824_1119824154	3300031231	Forest Soil	MSVNMQSTKHAKWTTRLWRTLAALDEAISVSAMEHLEKRIAVLEQKLWDGSELPRTHKESKPGQSV
Ga0306918_100956284	3300031744	Soil	MSVNMQSTKHAKWTTRVWRTLAALNEAISISPMEHLEKRIAVLEQKVWAGSEPPRTHKESKPGQSV
Ga0306919_108059651	3300031879	Soil	MSVNMQSTKHAKWTTRVWRTLAALDEAISVSPMEHLEKRIAVLEQKLWAGSE
Ga0306923_119697162	3300031910	Soil	MSVNMQSTKHAKWTTRVWRTLAALDEAISVSPMEHLEKRIAVLEQKLWAGSEPPNRHGHV
Ga0306921_106265212	3300031912	Soil	MSVNMQSTKHAKWTTRVWRTLAALNEAISISPMEHLEKRIAVLEQKVWAGSEPPRTHKLSKPGQSV
Ga0306924_106480122	3300032076	Soil	MSVNMQSTKHTKWTTRMWRTLAALDEAISVSPMEHLEKRVAALEQKVGAGSEPPCNQMESKPGQSV
Ga0307470_102316391	3300032174	Hardwood Forest Soil	MSVNMQSTKHAKWTTRLWRTLAALDEAISVSAMEHLEKRIAVLEQKLWDGSEPPR
Ga0306920_1018013652	3300032261	Soil	MSVNMQSTKPAKWTTRMWRTLAALDEAFSAGPMEHLEKRIAALEQEVSAGSEPPRTHKVSKPGQSDSESGVFCDAQPGA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103823

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences