Metagenome Family F103835

Basic Information
Family ID	F103835
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	77 residues
Representative Sequence	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQIVQKILCDSGLDL
Number of Associated Samples	82
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	70.30 %
% of genes near scaffold ends (potentially truncated)	22.77 %
% of genes from short scaffolds (< 2000 bps)	94.06 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (54.455 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.743 % of family members)
Environment Ontology (ENVO)	Unclassified (34.653 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.535 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 74.03% β-sheet: 0.00% Coil/Unstructured: 25.97%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF06532	NrsF	10.89
PF00487	FA_desaturase	4.95
PF06080	DUF938	3.96
PF06776	IalB	1.98
PF13191	AAA_16	0.99
PF05532	CsbD	0.99
PF00582	Usp	0.99
PF00873	ACR_tran	0.99
PF08281	Sigma70_r4_2	0.99
PF07365	Toxin_8	0.99
PF01464	SLT	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG4944	Uncharacterized conserved protein	Function unknown [S]	10.89
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	4.95
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	4.95
COG5342	Invasion protein IalB, involved in pathogenesis	General function prediction only [R]	1.98
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.99

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
All Organisms	root	All Organisms	45.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
cellular organisms	root	All Organisms → cellular organisms	45.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.60 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36.63 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	30.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	26.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.99 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	26.73 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.99 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	26.73 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.99 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	26.73 %
Bradyrhizobium sp. MOS002	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. MOS002	0.99 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_92468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1383	Open in IMG/M
3300000787\|JGI11643J11755_11757956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1213	Open in IMG/M
3300000787\|JGI11643J11755_11822176	Not Available	956	Open in IMG/M
3300000956\|JGI10216J12902_118155918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	737	Open in IMG/M
3300004114\|Ga0062593_100651306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1016	Open in IMG/M
3300004480\|Ga0062592_100862182	Not Available	811	Open in IMG/M
3300005093\|Ga0062594_103224139	Not Available	512	Open in IMG/M
3300005339\|Ga0070660_101174503	Not Available	650	Open in IMG/M
3300005347\|Ga0070668_101856111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	555	Open in IMG/M
3300005354\|Ga0070675_101427564	Not Available	638	Open in IMG/M
3300005364\|Ga0070673_100207063	Not Available	1692	Open in IMG/M
3300005365\|Ga0070688_101100592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	635	Open in IMG/M
3300005366\|Ga0070659_101530721	Not Available	595	Open in IMG/M
3300005367\|Ga0070667_101926011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	557	Open in IMG/M
3300005438\|Ga0070701_11065858	Not Available	567	Open in IMG/M
3300005439\|Ga0070711_101203925	Not Available	655	Open in IMG/M
3300005444\|Ga0070694_101063404	Not Available	674	Open in IMG/M
3300005456\|Ga0070678_101664727	Not Available	600	Open in IMG/M
3300005459\|Ga0068867_102154091	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005545\|Ga0070695_100964295	Not Available	692	Open in IMG/M
3300005842\|Ga0068858_100476697	Not Available	1204	Open in IMG/M
3300006047\|Ga0075024_100304197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	783	Open in IMG/M
3300006172\|Ga0075018_10109120	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300006854\|Ga0075425_100822166	Not Available	1064	Open in IMG/M
3300006871\|Ga0075434_100307734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1605	Open in IMG/M
3300009098\|Ga0105245_12170851	Not Available	609	Open in IMG/M
3300009146\|Ga0105091_10375943	Not Available	704	Open in IMG/M
3300009156\|Ga0111538_10905723	Not Available	1116	Open in IMG/M
3300009177\|Ga0105248_12089618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	644	Open in IMG/M
3300009551\|Ga0105238_11341247	Not Available	742	Open in IMG/M
3300009553\|Ga0105249_11258607	Not Available	811	Open in IMG/M
3300010371\|Ga0134125_10604138	Not Available	1212	Open in IMG/M
3300010373\|Ga0134128_11301103	Not Available	801	Open in IMG/M
3300010375\|Ga0105239_11104216	Not Available	913	Open in IMG/M
3300010399\|Ga0134127_11069431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	870	Open in IMG/M
3300012951\|Ga0164300_10154823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1078	Open in IMG/M
3300012951\|Ga0164300_10294198	Not Available	846	Open in IMG/M
3300012955\|Ga0164298_10000834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	8860	Open in IMG/M
3300012957\|Ga0164303_10012206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3037	Open in IMG/M
3300012957\|Ga0164303_10217010	Not Available	1072	Open in IMG/M
3300012957\|Ga0164303_10573476	Not Available	737	Open in IMG/M
3300012957\|Ga0164303_11074312	Not Available	579	Open in IMG/M
3300012957\|Ga0164303_11459034	Not Available	515	Open in IMG/M
3300012958\|Ga0164299_10450848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	842	Open in IMG/M
3300012958\|Ga0164299_10624620	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300012961\|Ga0164302_10972542	Not Available	659	Open in IMG/M
3300012961\|Ga0164302_11865745	Not Available	510	Open in IMG/M
3300012985\|Ga0164308_10047644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2749	Open in IMG/M
3300012985\|Ga0164308_10164762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1654	Open in IMG/M
3300012986\|Ga0164304_10069383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1996	Open in IMG/M
3300012987\|Ga0164307_10257011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1222	Open in IMG/M
3300012987\|Ga0164307_10566359	Not Available	870	Open in IMG/M
3300012988\|Ga0164306_10287061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1195	Open in IMG/M
3300012988\|Ga0164306_10906146	Not Available	719	Open in IMG/M
3300012989\|Ga0164305_10293582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1197	Open in IMG/M
3300012989\|Ga0164305_10377635	Not Available	1077	Open in IMG/M
3300012989\|Ga0164305_10419844	Not Available	1030	Open in IMG/M
3300013306\|Ga0163162_11573158	Not Available	750	Open in IMG/M
3300013308\|Ga0157375_12258020	Not Available	648	Open in IMG/M
3300014326\|Ga0157380_11595027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	708	Open in IMG/M
3300014745\|Ga0157377_10958112	Not Available	644	Open in IMG/M
3300014968\|Ga0157379_12473165	Not Available	519	Open in IMG/M
3300015371\|Ga0132258_10937486	All Organisms → cellular organisms → Bacteria → Proteobacteria	2187	Open in IMG/M
3300015371\|Ga0132258_11777131	Not Available	1554	Open in IMG/M
3300015371\|Ga0132258_12845646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1204	Open in IMG/M
3300015373\|Ga0132257_100529577	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300015374\|Ga0132255_100175299	All Organisms → cellular organisms → Bacteria → Proteobacteria	3015	Open in IMG/M
3300015374\|Ga0132255_101871710	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300017792\|Ga0163161_10481049	Not Available	1008	Open in IMG/M
3300017792\|Ga0163161_10534064	Not Available	959	Open in IMG/M
3300018028\|Ga0184608_10404203	Not Available	593	Open in IMG/M
3300019356\|Ga0173481_10121680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1036	Open in IMG/M
3300019361\|Ga0173482_10200703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	816	Open in IMG/M
3300020579\|Ga0210407_10871635	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300021405\|Ga0210387_11407426	Not Available	600	Open in IMG/M
3300023072\|Ga0247799_1064354	Not Available	625	Open in IMG/M
3300025899\|Ga0207642_10330813	All Organisms → cellular organisms → Bacteria → Acidobacteria	893	Open in IMG/M
3300025915\|Ga0207693_10904349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	677	Open in IMG/M
3300025916\|Ga0207663_11169126	Not Available	619	Open in IMG/M
3300025926\|Ga0207659_11248016	Not Available	638	Open in IMG/M
3300025931\|Ga0207644_11731742	Not Available	523	Open in IMG/M
3300025935\|Ga0207709_10805992	Not Available	758	Open in IMG/M
3300025961\|Ga0207712_10549806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	993	Open in IMG/M
3300026035\|Ga0207703_11464983	Not Available	657	Open in IMG/M
3300026067\|Ga0207678_10289873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1406	Open in IMG/M
3300026089\|Ga0207648_12127535	Not Available	522	Open in IMG/M
3300026118\|Ga0207675_101291510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	750	Open in IMG/M
3300027717\|Ga0209998_10125713	Not Available	649	Open in IMG/M
3300027894\|Ga0209068_10185137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. MOS002	1140	Open in IMG/M
3300031170\|Ga0307498_10148101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	776	Open in IMG/M
3300031226\|Ga0307497_10088700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1180	Open in IMG/M
3300031231\|Ga0170824_113539632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1392	Open in IMG/M
3300031231\|Ga0170824_113628291	Not Available	776	Open in IMG/M
3300031547\|Ga0310887_10026927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2359	Open in IMG/M
3300031547\|Ga0310887_10803765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	591	Open in IMG/M
3300031562\|Ga0310886_10387795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	821	Open in IMG/M
3300031740\|Ga0307468_101425042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	638	Open in IMG/M
3300031854\|Ga0310904_10458530	Not Available	847	Open in IMG/M
3300032017\|Ga0310899_10338739	Not Available	707	Open in IMG/M
3300032180\|Ga0307471_100766504	Not Available	1131	Open in IMG/M
3300032205\|Ga0307472_102247078	Not Available	551	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.40%
Host-Associated	Host-Associated	39.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.45%
Plants	Host-Associated → Plants	39.60%
Aquatic	Environmental → Aquatic	4.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.83%
Sediment	Environmental → Aquatic → Sediment	3.96%
Freshwater	Environmental → Aquatic → Freshwater	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.91%
Loam	Environmental → Terrestrial → Soil → Loam	6.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.99%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.98%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.99%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.99%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.99%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_01383290	2199352025	Soil	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQIVQKILCDSGLDL
JGI11643J11755_117579562	3300000787	Soil	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASMNGLDEQIVQKILSNSGLDRARNWQ
JGI11643J11755_118221762	3300000787	Soil	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASMNGLDEQIVQKILSNSGLDR*
JGI10216J12902_1181559181	3300000956	Soil	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIQSGSDEELEALLRRELMEIASMNGLDEQIVQKILSNSGLDR*
Ga0062593_1006513061	3300004114	Soil	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEEIVQKILSNSGLDR*
Ga0062592_1008621821	3300004480	Soil	MISKLKYKLDPLDREVLDRAFDEAWAAVHAKANALVESGSDEELEALLRRELMEIASMNGLDEQIVQKILSNSGLDR*
Ga0062594_1032241391	3300005093	Soil	MSSKLKYILDPLDRELLDRAFDEAWAAVYAKANALIESGSDEELETLLRRELMEIASFNGLDEQI
Ga0070660_1011745032	3300005339	Corn Rhizosphere	MISKLKYILDPLDREVLDRAFDEAWAAVHAKADALIESGSDEELEALLRRELMEIASFNGLDEQIVQKILCDSGLDL*
Ga0070668_1018561111	3300005347	Switchgrass Rhizosphere	DPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELIEIASFNGLDEQIVQKFLSDSGLNL*
Ga0070675_1014275642	3300005354	Miscanthus Rhizosphere	MSSKLKYILDPLDRELLDRAFDEAWAAVYAKANALIESGSDEELETLLRRELMEIASFNGLDEQIVQKILCDSGLDL*ARDWSSRNVFYAVLNSRGR
Ga0070673_1002070631	3300005364	Switchgrass Rhizosphere	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASINGLDGEQIVQTILSDNGLD
Ga0070688_1011005922	3300005365	Switchgrass Rhizosphere	MISKLKYKLDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQIVRKILCDSGLEL*
Ga0070659_1015307211	3300005366	Corn Rhizosphere	MISKLKYILDPLDREVLDRAFDEAWAAVYAKANALIESGSDEELETLLRRELMEIASFNGLDEQIVRKILCDSGLEL*
Ga0070667_1019260112	3300005367	Switchgrass Rhizosphere	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGNDEELETLLRRELMEIASFNGLDEQIVQKILCDSGLDL*
Ga0070701_110658581	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MSSKLKYILDPLDRELLDRAFDEAWAAVYAKANALIESGSDEGLETLLRRELMEIASFNGLDEQIVQKILCDSGLDL*
Ga0070711_1012039252	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSSKLKYILDPLDRELLDRAFDEAWAAVYAKANALIESGSDEELETLLRRELMEIASFNGLDEQIVQKILCDSGLDL*
Ga0070694_1010634041	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELETLLRRELMEIASFNGLDEQIVQKILCD
Ga0070678_1016647272	3300005456	Miscanthus Rhizosphere	MISKLKYKLDPLDREVLDRAFDEAWAAVHAKANALIESGNDEELETLLRRELMEIASFNGLDEQIVRKILCDSGLEL*
Ga0068867_1021540911	3300005459	Miscanthus Rhizosphere	MISKLKYMLDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQIVQKILCDSGLDL*
Ga0070695_1009642952	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFSGLDEQTVQKILCDSGLDL*
Ga0068858_1004766973	3300005842	Switchgrass Rhizosphere	MSSKLKYILDPLDREMLDRAFDEACAAVYAKANALIESGSDGELEALLRRELMEIASFSGLDEQTVQKILCDSGLDL*
Ga0075024_1003041971	3300006047	Watersheds	MISRLKYILDPLDREVLDRAFDEALAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQIVQKILSDSGLDR*
Ga0075018_101091202	3300006172	Watersheds	MISKFKRILDPLDREVLERALDEAWAAAHAKANALIESGSDEELEALLRRELMEIASFNGFDGEQIVQTILSDNGLDL*
Ga0075425_1008221662	3300006854	Populus Rhizosphere	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQIVQKILSDSGLDR*
Ga0075434_1003077344	3300006871	Populus Rhizosphere	MISKLKYILDPLDREVLDRAFDEAWAVVHAKANALIESGSDEELEALLRRELMEIASFNGLDEEIVQKILSNSGLDR*
Ga0105245_121708512	3300009098	Miscanthus Rhizosphere	MSSKLKYILDPLDRELLDRAFDEAWAAVYAKANALIESGSDEELETLLRRELMEIASFNGLDEQIVQKILCD
Ga0105091_103759431	3300009146	Freshwater Sediment	MRAAYGAPQCDLQQKDDMISKLKYILDPLDREVLDRAFDEALATVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQIVQKILYDSGLDH*
Ga0111538_109057232	3300009156	Populus Rhizosphere	MISKFKRILDPLDREVLERALDEAWAAAHAKANALIESGSDEELEALLRRELMEIASINGLDGEQIVQTILSDNGLDL*
Ga0105248_120896181	3300009177	Switchgrass Rhizosphere	LDPLDREVLDRAFDEAWAAVHAKANALIESGNDEELETLLRRELMEIASFNGLDEQIVRKILCDSGLEL*
Ga0105238_113412471	3300009551	Corn Rhizosphere	MISKLKYKLDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELETLRRLELMEIASFNGLDEQIVQKILCDSGLDL*
Ga0105249_112586071	3300009553	Switchgrass Rhizosphere	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQSVRKLLSNSGLDL*
Ga0134125_106041381	3300010371	Terrestrial Soil	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQIVQKILSNGGFDL*
Ga0134128_113011031	3300010373	Terrestrial Soil	MISKLKYKLDPLDREVLDRAFDEAWAAVHAKANALIESGNDEELETLLRRELMEIASFNGLDEQIVRKILCDSGLDL*
Ga0105239_111042162	3300010375	Corn Rhizosphere	MSSKLKYILDPLDRELLDRAFDEAWAAVHAKANALIESGNDEELETLLRRELMEIASFNGLDEQIVRKILCDSGLEL*
Ga0134127_110694311	3300010399	Terrestrial Soil	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGNDEELETLLRRELMEIASFNGLDEQIVRKILCDSGLEL*
Ga0164300_101548231	3300012951	Soil	QQRTIMISKFKRILDPLDREILERALDEARAAAHAKANALIESGSDEELEALLRRELMEIASINGLDGEQIVQTILSDNGLDL*
Ga0164300_102941981	3300012951	Soil	MSSKLKYILDPLDREMLDRAFDEACAAVHAKAHALIESGSDEELEALLRRELLEIASFNGLDEQTVQKILCD*
Ga0164298_100008341	3300012955	Soil	QRRTNMISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQIVRKILCDSGLEL*
Ga0164303_100122061	3300012957	Soil	QRRTNMISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGNDEELETLLRRELMEIASFNGLDEQIVRKILCDSGLEL*
Ga0164303_102170102	3300012957	Soil	MISKLKYSLDQLDREVLDRAFDKAWTAVHAKANALIESGSDEELEALLRRELMEITSFNGLDEKIVQKILSDRGLDL*
Ga0164303_105734761	3300012957	Soil	MISKFKRILDPLDREVLERALDEAWAAAHAKANPLIESGSDEELEALLRRELMEIASINGLDGQQIVQTILSDNGLDL*
Ga0164303_110743121	3300012957	Soil	MISKFKPILDPLDREVLERALDEAWTAAHAKANPLIESGSDEELEALLRRALMEIASINGLDGEQIVQTILSDNGLDP*
Ga0164303_114590341	3300012957	Soil	MISKFKRILDPLDREILERALDEAWAAAHAKANALIESASDEELEALLRRELMEIASINGLDGEQIVQTILSDNGLDL*
Ga0164299_104508482	3300012958	Soil	MISKFKRILDPLDREVLERALDEAWAAAHAKANPLIESGSDEELEALLRRELMEIASINGLDGEQIVQTILSDNGLDL*
Ga0164299_106246202	3300012958	Soil	MISKFKRILDPLDREILECALDEAWAAVHAKAKALIESGSDEELEAVLRRELMEIVSFNGLDGEQIVQTILSDNGLDL*
Ga0164302_109725421	3300012961	Soil	MISKFKRILDPLDREVLERALDEAWAAVHAKANALIESGSDEELEALLRRELMEIASINGLDGEQIVQTILSDNGLDL*
Ga0164302_118657451	3300012961	Soil	MISKLKYSLDPLDREVLDRAFDEAWTAVHAKANALIESGSDEELEALLRRELMEITSFNGLDEKIVQKILSDRGLDL*
Ga0164308_100476441	3300012985	Soil	NMISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGNDEELETLLRRELMEIASFNGLDEQIVRKILCDSGLEL*
Ga0164308_101647621	3300012985	Soil	NMISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQIVQKILCDSGLDL*
Ga0164304_100693834	3300012986	Soil	MFSKLKYILDPLDREVLDRAFDEALATVHTKANTLIESGSDEELEALLRRELMEIASFNGLDEQSVQKILSDFGLDR*
Ga0164307_102570112	3300012987	Soil	MISKFKRILDPLDREILERALDEAWAAAHAKANALIESGSDEELEALLRRELMEIASINGLDGEQIVQTILSDNGLDL*
Ga0164307_105663592	3300012987	Soil	MSSKLKYILDPLDRELLDRAFDEAWAAVYAKANALIESGSDEELETLLRELMEIASFNGLDEQIVQKILCDSGSISEPGIGVRGTSAMPS*
Ga0164306_102870613	3300012988	Soil	VISKFKRILDPLDREVLERALDEAWAAVHAKANALIESGSDEELEAVLRRELMEIASFNGLDGEQIVQTILSDNGLDL*
Ga0164306_109061461	3300012988	Soil	MSVKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQIVQNILSDS
Ga0164305_102935823	3300012989	Soil	ILDPLDREILERALDEAWAAAHAKANALIESGSDDELEALLRRELMEIASINGLDGEQIVQTILSDNGLDL*
Ga0164305_103776351	3300012989	Soil	MSSKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQIVQKILCD
Ga0164305_104198442	3300012989	Soil	MISKLKYILDPLDREVLDRAFDEALAAVHATANALIESDEELEALLRRELMEIASFNGLEEQIVQKILSDSGLDL*
Ga0163162_115731582	3300013306	Switchgrass Rhizosphere	MRIAARNGRNYFMRSAYRAQCDWQRRTNMISKLKYMLDPLDREVLDRAFDEAWAAVHAKANALIESGNDEELETLLRRELMEIASFNGLDEQIVRKILCDSGLEL*
Ga0157375_122580201	3300013308	Miscanthus Rhizosphere	MSSKLKYILDPLDREMLDRAFDEAWAAVYAKANALIESGSDEELETLLRRELMEIASFNGLDEQIVQKILCDSGLDL*
Ga0157380_115950272	3300014326	Switchgrass Rhizosphere	MISKLKYMLDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASLNGLDEQIVQKILCDSGLEL*
Ga0157377_109581122	3300014745	Miscanthus Rhizosphere	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASLNGLDEQIVQKILCDSGLDL*
Ga0157379_124731651	3300014968	Switchgrass Rhizosphere	MSSKLKYILDPLDRELLDRAFDEAWAAVYAKANALIESGSDEELETLLRRELMEIASFNGLDEQIVQKI
Ga0132258_109374864	3300015371	Arabidopsis Rhizosphere	MSTKLKYILDPLDREMLDRAFDEACAAVHAKAHALIESGSDEVLEALLRRELLEIASFNGLDEQTVQKILCD*
Ga0132258_117771313	3300015371	Arabidopsis Rhizosphere	MISKFKRILDPLDREVLERALDEAWAAAHAKANALIASGSDEELEALLRRELMEIASINGLDGEQIVQTILSDNGLDL*
Ga0132258_128456462	3300015371	Arabidopsis Rhizosphere	MISKLKYILDPLDREFLDRAFDEALAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQIVQKILSDSGLDR*
Ga0132257_1005295772	3300015373	Arabidopsis Rhizosphere	MSSNLKYILDPLDREVLDRAFDEAWAAVHAKANALIESDSDEELATLLRRELMEIASFNGLDEQIIQKILCDSGLDL*
Ga0132255_1001752996	3300015374	Arabidopsis Rhizosphere	MSTKLKYILDPLDREMLDRAFDEACAAVHAQAHALIESGSDEVLEALLRRELLEIASFNGLDEQTVQKILCD*
Ga0132255_1018717102	3300015374	Arabidopsis Rhizosphere	MSSKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESDSDEELATLLRRELMEIASFNGLDEQIIQKILCDSGLDL*
Ga0163161_104810492	3300017792	Switchgrass Rhizosphere	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQSVRKLLSNSGLDR
Ga0163161_105340642	3300017792	Switchgrass Rhizosphere	MSSKLKYILDPLDRELLDRAFDEAWAAVYAKANALIESGSDEVLETLLRRELMEIASFSGLDEQTVQKILCDSGLDL
Ga0184608_104042032	3300018028	Groundwater Sediment	MISKLKYILDPLDREVLDRAFDEALAAVHAKANTLIESGSDEELEALLRRELMEIASFNGLDEQIVQKILSDSGLDL
Ga0173481_101216802	3300019356	Soil	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASMNGLDEQIVQKILSNSGLDR
Ga0173482_102007032	3300019361	Soil	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEEIVQKILSNSGLDR
Ga0210407_108716351	3300020579	Soil	PLDREVLERALDEAWAAAHAKANALIESGSDEELEALLRRELMEIASINGLDGEQIVQTILSDNGLDL
Ga0210387_114074262	3300021405	Soil	MISKFKRILDPLDREILERALDEAWAAAHAKANAFIESGSDEELEALLRRELMEIASINGLDGEQIVQTILSDNGLDL
Ga0247799_10643541	3300023072	Soil	MISKLKCILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQIVQKILSNGGFDL
Ga0207642_103308131	3300025899	Miscanthus Rhizosphere	MSSKLKYILDPLDRELLDRAFDEAWAAVYAKANALIESGSDEELETLLRRELMEIASFNGLDEQIVQKILCDSGLDL
Ga0207693_109043492	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VISKFKRILDPLDREVLERALDEAWAAAHEKANALIESGSDEELEALLRRELMEIASINGLDGEQIVQTILSDNGLDL
Ga0207663_111691261	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VISKFKRILDPLDREVLERALDEAWAAAHAKANALIESGSDEELEALLRRELMEIASINGLDGEQIVQT
Ga0207659_112480161	3300025926	Miscanthus Rhizosphere	MSSKLKYILDPLDRELLDRAFDEAWGAVYAKANALIESGSDEELETLLRRELMEIASFNGLDEQIVQKILCDSGLDL
Ga0207644_117317421	3300025931	Switchgrass Rhizosphere	CDSQRRTNMISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQIVQKILCDSGLDL
Ga0207709_108059922	3300025935	Miscanthus Rhizosphere	MSSKLKYILDPLDRELLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASLNGLDKQIVQKILCDSGLEL
Ga0207712_105498062	3300025961	Switchgrass Rhizosphere	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQSVRKLLSDSGLDL
Ga0207703_114649831	3300026035	Switchgrass Rhizosphere	MSSKLKYILDPLDREMLDRAFDEACAAVYAKANALIESGSDGELEALLRRELMEIASFSGLDEQTVQKILCDSGLDL
Ga0207678_102898732	3300026067	Corn Rhizosphere	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGNDEELETLLRRELMEIASFNGLDEQIVQKILCDSGLDL
Ga0207648_121275352	3300026089	Miscanthus Rhizosphere	MISKLKYMLDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQIVQKILCDSGARTLSQVSE
Ga0207675_1012915101	3300026118	Switchgrass Rhizosphere	MSSKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQIVQKILCDSGLDL
Ga0209998_101257132	3300027717	Arabidopsis Thaliana Rhizosphere	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEEREALLRRELMEIASFNGLDEEIVQKILSNSGLDR
Ga0209068_101851371	3300027894	Watersheds	LKYNLDPLDREVLDRAFDEAWTAIRAKANALIESGSDEELEALLRRELMEIVSFNGLDERIVQKILSDCGLDL
Ga0307498_101481011	3300031170	Soil	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQIVRKILCDSGLEL
Ga0307497_100887001	3300031226	Soil	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGNDEELETLLRRELMEIASFNGLDEQIVRKILCDSGLEL
Ga0170824_1135396322	3300031231	Forest Soil	MISKLKYILDPLDREAPDHAFDEAWAAVHAKAHALIESGELEVLLRRELMEIASFNGLDEQIVQKILSHSELDL
Ga0170824_1136282911	3300031231	Forest Soil	MISKFKRILDPLDREVLERALDEAWAAAHAKANALIESGSDEELEALLRRELMEIASINGLDGEQIVQTILSDNGLDL
Ga0310887_100269273	3300031547	Soil	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGNDEELETRLRRELMEIASFNGLDEQIVRKILCDSGLEL
Ga0310887_108037651	3300031547	Soil	VISKLKYIIDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQIVQKILSDSGLDR
Ga0310886_103877952	3300031562	Soil	MISKLKYILDPLDREFLDRAFDEALAAVHAKANALIESGSDEELEALLRRELIEIASFNGLDEQIVQKILSDSGLDR
Ga0307468_1014250421	3300031740	Hardwood Forest Soil	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELIEIASFNGLDEQIVQKFLSDSGLNL
Ga0310904_104585301	3300031854	Soil	MISKLKYILDPLDREFLDRAFDEALAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQIVQKILSDSGLDR
Ga0310899_103387391	3300032017	Soil	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEELEALLRRELMEIASFNGLDEQIVQKILSD
Ga0307471_1007665042	3300032180	Hardwood Forest Soil	VISKFKRILDPLDREVLERALDEAWAAAHAKANALIESGSDEELEALLRRELMEIASFNGLDEQSVRKLLSDSGLDL
Ga0307472_1022470781	3300032205	Hardwood Forest Soil	MISKLKYILDPLDREVLDRAFDEAWAAVHAKANALIESGSDEKLEALLRRELMEIASFNGLDEQSVRKLLSDSGLDL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103835

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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