Metagenome / Metatranscriptome Family F103894

Basic Information
Family ID	F103894
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	46 residues
Representative Sequence	MSEEIKNLVEDLGWEYQRMSSSGRETYKELCLKLGWKFEWDDEELG
Number of Associated Samples	82
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.00 %
% of genes near scaffold ends (potentially truncated)	34.65 %
% of genes from short scaffolds (< 2000 bps)	84.16 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Most Common Taxonomy
Group	Bacteria (59.406 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (28.713 % of family members)
Environment Ontology (ENVO)	Unclassified (76.238 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (96.040 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.24% β-sheet: 0.00% Coil/Unstructured: 56.76%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF11284	DUF3085	26.73
PF00856	SET	3.96
PF00145	DNA_methylase	2.97
PF10544	T5orf172	0.99
PF05866	RusA	0.99
PF13155	Toprim_2	0.99
PF03237	Terminase_6N	0.99
PF12684	DUF3799	0.99
PF03592	Terminase_2	0.99
PF00692	dUTPase	0.99
PF05226	CHASE2	0.99
PF10614	CsgF	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	2.97
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	0.99
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	0.99
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.99
COG4252	Extracytoplasmic sensor domain CHASE2 (specificity unknown)	Signal transduction mechanisms [T]	0.99
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.33 %
Unclassified	root	N/A	32.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.40 %
Unclassified	root	N/A	32.67 %
Viruses	superkingdom	All Organisms → Viruses	6.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.41 %
Unclassified	root	N/A	32.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.93 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.67 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	29.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.88 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	8.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.93 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.67 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	29.70 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	7.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.97 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	0.99 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.67 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	29.70 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	6.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.93 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3.96 %
Balneolaeota	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota	3.96 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	1.98 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.99 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.99 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.99 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.67 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	29.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.95 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	3.96 %
Balneolia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia	3.96 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	1.98 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	1.98 %
Morganellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Morganellaceae	0.99 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.99 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.99 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.67 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	29.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.95 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	3.96 %
Balneolales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales	3.96 %
unclassified Pelagibacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae	1.98 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	1.98 %
unclassified Rhodobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae	0.99 %
Proteus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Morganellaceae → Proteus	0.99 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.99 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.67 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	29.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.95 %
Balneolaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae	3.96 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	3.96 %
Pelagibacteraceae bacterium TMED237	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED237	1.98 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	1.98 %
Proteus faecis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Morganellaceae → Proteus → Proteus faecis	0.99 %
Rhodobacteraceae bacterium TMED111	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED111	0.99 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.99 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.67 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	29.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.95 %
Balneola	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola	3.96 %
Xanthomarina	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina	1.98 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	1.98 %
Pelagibacteraceae bacterium TMED237	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED237	1.98 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	1.98 %
Proteus faecis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Morganellaceae → Proteus → Proteus faecis	0.99 %
Rhodobacteraceae bacterium TMED111	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED111	0.99 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.99 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.67 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	29.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.95 %
unclassified Balneola	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola	3.96 %
Xanthomarina gelatinilytica	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica	1.98 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1.98 %
Pelagibacteraceae bacterium TMED237	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED237	1.98 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	1.98 %
Proteus faecis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Morganellaceae → Proteus → Proteus faecis	0.99 %
Rhodobacteraceae bacterium TMED111	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED111	0.99 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.99 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.67 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	29.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.95 %
Balneola sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	3.96 %
Xanthomarina gelatinilytica	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica	1.98 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1.98 %
Pelagibacteraceae bacterium TMED237	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED237	1.98 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	1.98 %
Proteus faecis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Morganellaceae → Proteus → Proteus faecis	0.99 %
Rhodobacteraceae bacterium TMED111	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED111	0.99 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.99 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000115\|DelMOSum2011_c10201503	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	554	Open in IMG/M
3300000116\|DelMOSpr2010_c10168847	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	730	Open in IMG/M
3300000116\|DelMOSpr2010_c10252489	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	536	Open in IMG/M
3300000117\|DelMOWin2010_c10021972	Not Available	3295	Open in IMG/M
3300001352\|JGI20157J14317_10062442	Not Available	1598	Open in IMG/M
3300001450\|JGI24006J15134_10188397	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	640	Open in IMG/M
3300001460\|JGI24003J15210_10046161	All Organisms → Viruses → Predicted Viral	1478	Open in IMG/M
3300001460\|JGI24003J15210_10131931	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	665	Open in IMG/M
3300001472\|JGI24004J15324_10039841	All Organisms → Viruses → Predicted Viral	1460	Open in IMG/M
3300002511\|JGI25131J35506_1003076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED111	2423	Open in IMG/M
3300004448\|Ga0065861_1030341	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1065	Open in IMG/M
3300004448\|Ga0065861_1063063	Not Available	666	Open in IMG/M
3300004461\|Ga0066223_1096827	All Organisms → Viruses → Predicted Viral	2222	Open in IMG/M
3300005427\|Ga0066851_10132296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED237	800	Open in IMG/M
3300006025\|Ga0075474_10211256	Not Available	592	Open in IMG/M
3300006026\|Ga0075478_10019098	Not Available	2317	Open in IMG/M
3300006029\|Ga0075466_1012180	All Organisms → cellular organisms → Bacteria	2915	Open in IMG/M
3300006164\|Ga0075441_10134128	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica	939	Open in IMG/M
3300006404\|Ga0075515_10720821	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	693	Open in IMG/M
3300006735\|Ga0098038_1006481	All Organisms → cellular organisms → Bacteria → Proteobacteria	4735	Open in IMG/M
3300006735\|Ga0098038_1124679	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	873	Open in IMG/M
3300006735\|Ga0098038_1220400	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	607	Open in IMG/M
3300006735\|Ga0098038_1271954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	531	Open in IMG/M
3300006735\|Ga0098038_1287592	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	512	Open in IMG/M
3300006737\|Ga0098037_1078109	All Organisms → Viruses → Predicted Viral	1164	Open in IMG/M
3300006737\|Ga0098037_1227745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	603	Open in IMG/M
3300006749\|Ga0098042_1033802	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1439	Open in IMG/M
3300006752\|Ga0098048_1105759	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300006802\|Ga0070749_10593935	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	597	Open in IMG/M
3300006868\|Ga0075481_10067811	Not Available	1349	Open in IMG/M
3300006870\|Ga0075479_10307332	Not Available	621	Open in IMG/M
3300006916\|Ga0070750_10055126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	1915	Open in IMG/M
3300006920\|Ga0070748_1186040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	763	Open in IMG/M
3300006924\|Ga0098051_1210988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED237	505	Open in IMG/M
3300006926\|Ga0098057_1117956	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	647	Open in IMG/M
3300006947\|Ga0075444_10180716	Not Available	864	Open in IMG/M
3300007963\|Ga0110931_1133613	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	746	Open in IMG/M
3300008218\|Ga0114904_1022693	All Organisms → Viruses → Predicted Viral	1819	Open in IMG/M
3300009481\|Ga0114932_10487032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Morganellaceae → Proteus → Proteus faecis	726	Open in IMG/M
3300009508\|Ga0115567_10055866	All Organisms → cellular organisms → Bacteria	2957	Open in IMG/M
3300009605\|Ga0114906_1173545	Not Available	733	Open in IMG/M
3300009605\|Ga0114906_1223958	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	622	Open in IMG/M
3300010149\|Ga0098049_1266070	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	520	Open in IMG/M
3300011128\|Ga0151669_133432	Not Available	1587	Open in IMG/M
3300011128\|Ga0151669_157708	Not Available	692	Open in IMG/M
3300011252\|Ga0151674_1040953	Not Available	726	Open in IMG/M
3300012952\|Ga0163180_11480662	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	566	Open in IMG/M
3300017697\|Ga0180120_10078834	Not Available	1452	Open in IMG/M
3300017697\|Ga0180120_10095967	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	1293	Open in IMG/M
3300017697\|Ga0180120_10312946	Not Available	627	Open in IMG/M
3300017709\|Ga0181387_1064888	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	733	Open in IMG/M
3300017727\|Ga0181401_1044143	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	1239	Open in IMG/M
3300017728\|Ga0181419_1132467	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	603	Open in IMG/M
3300017742\|Ga0181399_1094588	Not Available	743	Open in IMG/M
3300017743\|Ga0181402_1040459	Not Available	1276	Open in IMG/M
3300017750\|Ga0181405_1081846	Not Available	824	Open in IMG/M
3300017769\|Ga0187221_1186508	Not Available	603	Open in IMG/M
3300017773\|Ga0181386_1260773	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	511	Open in IMG/M
3300017781\|Ga0181423_1041830	Not Available	1842	Open in IMG/M
3300017781\|Ga0181423_1155101	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300017824\|Ga0181552_10271787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	845	Open in IMG/M
3300017951\|Ga0181577_10261517	Not Available	1135	Open in IMG/M
3300018424\|Ga0181591_10229160	Not Available	1447	Open in IMG/M
3300019938\|Ga0194032_1014984	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	825	Open in IMG/M
3300020165\|Ga0206125_10208094	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	760	Open in IMG/M
3300020176\|Ga0181556_1113625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1193	Open in IMG/M
3300020417\|Ga0211528_10281607	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	625	Open in IMG/M
3300020421\|Ga0211653_10001780	Not Available	11980	Open in IMG/M
3300020438\|Ga0211576_10561378	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	572	Open in IMG/M
3300020448\|Ga0211638_10086276	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300020477\|Ga0211585_10008803	Not Available	9631	Open in IMG/M
3300021371\|Ga0213863_10402788	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	553	Open in IMG/M
3300021378\|Ga0213861_10083692	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	1943	Open in IMG/M
3300021389\|Ga0213868_10108880	Not Available	1773	Open in IMG/M
3300021958\|Ga0222718_10421127	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	662	Open in IMG/M
3300021958\|Ga0222718_10459068	Not Available	624	Open in IMG/M
3300021958\|Ga0222718_10611387	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	510	Open in IMG/M
3300021964\|Ga0222719_10037376	All Organisms → cellular organisms → Bacteria	3771	Open in IMG/M
3300021964\|Ga0222719_10725527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	557	Open in IMG/M
3300022050\|Ga0196883_1034324	Not Available	617	Open in IMG/M
3300022187\|Ga0196899_1100930	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	855	Open in IMG/M
3300025046\|Ga0207902_1024293	Not Available	724	Open in IMG/M
3300025048\|Ga0207905_1014007	All Organisms → Viruses → Predicted Viral	1369	Open in IMG/M
3300025052\|Ga0207906_1043421	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	609	Open in IMG/M
3300025084\|Ga0208298_1083257	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	592	Open in IMG/M
3300025086\|Ga0208157_1001547	Not Available	10256	Open in IMG/M
3300025086\|Ga0208157_1117899	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	620	Open in IMG/M
3300025098\|Ga0208434_1044773	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	987	Open in IMG/M
3300025101\|Ga0208159_1012847	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica	2199	Open in IMG/M
3300025125\|Ga0209644_1087698	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	732	Open in IMG/M
3300025127\|Ga0209348_1215623	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	527	Open in IMG/M
3300025296\|Ga0208316_1059925	Not Available	763	Open in IMG/M
3300025626\|Ga0209716_1067410	All Organisms → Viruses → Predicted Viral	1110	Open in IMG/M
3300029309\|Ga0183683_1018098	All Organisms → cellular organisms → Bacteria	1509	Open in IMG/M
3300029319\|Ga0183748_1007920	All Organisms → cellular organisms → Bacteria	4694	Open in IMG/M
3300029319\|Ga0183748_1034088	Not Available	1605	Open in IMG/M
3300029319\|Ga0183748_1067832	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	931	Open in IMG/M
3300029448\|Ga0183755_1000043	Not Available	58272	Open in IMG/M
3300031659\|Ga0307986_10269442	Not Available	726	Open in IMG/M
3300034374\|Ga0348335_022423	All Organisms → cellular organisms → Bacteria	2988	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.01%
Freshwater	Environmental → Aquatic → Freshwater	0.99%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	33.66%
Coastal	Environmental → Aquatic → Marine → Coastal	23.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified	18.81%
Strait	Environmental → Aquatic → Marine → Strait	9.90%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	4.95%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.96%
Pelagic	Environmental → Aquatic → Marine → Pelagic	2.97%
River	Environmental → Aquatic → Freshwater → River	0.99%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	33.66%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	23.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	18.81%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	9.90%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	4.95%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	3.96%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	28.71%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	12.87%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	11.88%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	9.90%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	4.95%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	3.96%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	3.96%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	3.96%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	2.97%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.97%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.97%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	2.97%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	1.98%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.99%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.99%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.99%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.99%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.99%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300002511	Marine viral communities from the Pacific Ocean - ETNP_2_1000	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004461	Marine viral communities from Newfoundland, Canada BC-2	Environmental	Open in IMG/M
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006029	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006404	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006868	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300006926	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG	Environmental	Open in IMG/M
3300006947	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008218	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300011128	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, 0.02	Environmental	Open in IMG/M
3300011252	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, permeate	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017709	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27	Environmental	Open in IMG/M
3300017727	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20	Environmental	Open in IMG/M
3300017728	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24	Environmental	Open in IMG/M
3300017742	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21	Environmental	Open in IMG/M
3300017743	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019938	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW8Nov16_MG	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011505AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020383	Marine microbial communities from Tara Oceans - TARA_B100000929 (ERX556043-ERR598971)	Environmental	Open in IMG/M
3300020417	Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)	Environmental	Open in IMG/M
3300020421	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020448	Marine microbial communities from Tara Oceans - TARA_B100000941 (ERX555919-ERR598954)	Environmental	Open in IMG/M
3300020477	Marine microbial communities from Tara Oceans - TARA_B100001123 (ERX555935-ERR599156)	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300021378	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022050	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3)	Environmental	Open in IMG/M
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental	Open in IMG/M
3300025046	Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)	Environmental	Open in IMG/M
3300025048	Marine viral communities from the Subarctic Pacific Ocean - LP-49 (SPAdes)	Environmental	Open in IMG/M
3300025052	Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)	Environmental	Open in IMG/M
3300025084	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025098	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)	Environmental	Open in IMG/M
3300025101	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)	Environmental	Open in IMG/M
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025296	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231 (SPAdes)	Environmental	Open in IMG/M
3300025626	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)	Environmental	Open in IMG/M
3300029309	Marine viral communities collected during Tara Oceans survey from station TARA_100 - TARA_R100001440	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300031659	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82	Environmental	Open in IMG/M
3300034374	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103894

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2011_102015033	3300000115	Marine	MSEEIKNLVENLGWEYQRMTSSGRETYKNLCLKLGWEFEWDDEELG*
DelMOSpr2010_101688473	3300000116	Marine	MSEEIKNLVEDLGWEYQRMSSCGREAYKSLCLKLGWEFEWDDKLEIEILKELR*
DelMOSpr2010_102524893	3300000116	Marine	TKMSEEIKNLVEDLGWEYQRMSSCGRETYKNLCLKLGWKFELEIEDDS*
DelMOWin2010_100219722	3300000117	Marine	MSEEIKNLVEDLGWEYQRMTSSGRETYKNLCLKLGWEFEWDDEELG*
JGI20157J14317_100624424	3300001352	Pelagic Marine	MSEEIKNLVEDLGWEYQRMSSIGRETYKNLCLKLGWEFEWDDKLEIEILKELR*
JGI24006J15134_101883972	3300001450	Marine	MEEIKDIVEDLGWEYQRMSSSGQESYKKLCLKLGWDFEWNEES*
JGI24003J15210_100461618	3300001460	Marine	MEEIKDIVEDLGWEYQRMSSSGQESYKKLCLKLGWDF
JGI24003J15210_101319312	3300001460	Marine	MEEIKDIVEDLGWEYQRMSSSGQESYKKLCLKLGWDFEWDEES*
JGI24004J15324_100398412	3300001472	Marine	MSXATQFKXLVEDLGWEYQRMTSSGRETYKNLCLKLGWTFEWDDEELG*
JGI25131J35506_10030765	3300002511	Marine	MSKEIKDLVDDLGWDYDRMSESGKETYKKLCLKLGWEFETEENNHE*
Ga0065861_10303411	3300004448	Marine	MSDKKLELIKNLVDDLGWDYQGMTEDGRETYKKLCLSLGWEFEWDDEELG*
Ga0065861_10630633	3300004448	Marine	MNTKQIEAVKNLVDDLGWDYQSMTQGGRDTYKKLCLALGWVFEWDDEELG*
Ga0066223_10968274	3300004461	Marine	MSDKKLELIKNLVDDLGWDYQGMTEDGREQYKKLCLTLGWEFEWDDEELG*
Ga0066851_101322961	3300005427	Marine	MTKKELEEIKNLVDDLGWDYQSLTMGGREVYKKLCLKLGWKFEWDDEED*
Ga0075474_102112561	3300006025	Aqueous	SNRGDRMSEEIKNLVEDLGWEYQRMSSIGRETYKNLCLKLGWEFEWDDKLEIEILKELR*
Ga0075478_100190985	3300006026	Aqueous	MSEEIKNLVEDLGWEYQRMSSCGRETYKNLCLKLGWKFELEIEDE*
Ga0075466_10121806	3300006029	Aqueous	MSEEIKNLVEDLGWEYQRMSSCGRETYKNLCLKLGWKFELEIEDDS*
Ga0075441_101341282	3300006164	Marine	MSKEIKDLVDDLGWEYQRMTSSGRATYKKLCLKLGWEFEWDDEELG*
Ga0075515_107208213	3300006404	Aqueous	MSEEIKNLVEDLGWEYQRMSSIGRETYKNLCLKLGWEFEWDDKLEIEILKE
Ga0098038_10064818	3300006735	Marine	MTDTKHISLTSEKVKDLVDDLGWDYDRMSTSGQETYKELCLKLGWEFETDD*
Ga0098038_11246792	3300006735	Marine	MNEEIKKLVDDLGWEYQRMSSSGRETYKQLCLKLGWKFEWNDEELG*
Ga0098038_12204002	3300006735	Marine	MTKEIEKLVDDLGWEYQRMSSSGRETYKELCLKLGWEFEWDDEELG*
Ga0098038_12719542	3300006735	Marine	MSEEIKNLVEDLGWEYQRMTSCGRETYKSLCLKLGWEFEWDD
Ga0098038_12875922	3300006735	Marine	MTKEIEKLVDDLGWEYQRMSSCGRETYKELCLKLGWEFEWDDEELG*
Ga0098037_10781093	3300006737	Marine	MSEEIKNLVEDLGWEYQRMSSCGREAYKSLCLKLGWEFEWDDEELG*
Ga0098037_12277451	3300006737	Marine	MSEEIKNLVEDLGWEYQRMTSCGRETYKSLCLKLGWEFEWDDEELG*
Ga0098042_10338024	3300006749	Marine	MTKEIEKLVDDLGWEYQRMSSSGRETYKELCLKLGWKFEWDDEELG*
Ga0098048_11057593	3300006752	Marine	MSEEIKNLVEDLGWEYQRMTSSGRETYKNLCLKLGWKFEWDDEELG*
Ga0070749_105939352	3300006802	Aqueous	MSEEIKNLVEDLGWEYQRMSSCGREAYKSLCLKLGWEFEWDDKLEIEILKEL
Ga0075481_100678111	3300006868	Aqueous	MSEEIKNLVEDLGWEYQRMSSCGRETYKNLCLKLGWKFEL
Ga0075479_103073321	3300006870	Aqueous	EEIKNLVEDLGWEYQRMSSIGRETYKNLCLKLGWEFEWDDEELG*
Ga0070750_100551264	3300006916	Aqueous	CGDKLMEEIKDIVEDLGWEYQRMSSSRQESYKKLCLKLGWDFEWDEES*
Ga0070748_11860402	3300006920	Aqueous	MEEIKDIVEELGWQYQRMSSRGQESYKKLCLKLGWDFEWDEES*
Ga0098051_12109882	3300006924	Marine	MTKKELEEIKNLVDDLGWDYQSLTMGGREVYKKLCLKLGWKFEWDD
Ga0098057_11179562	3300006926	Marine	MENKQAKALKKVQDLVDDLGWEYQRMSSCGRESYKKLCKLLGWEFVWDDEELG*
Ga0075444_101807163	3300006947	Marine	MTEEIKDLVDDLGWDYDRMSESGKETYKKLCLKLGWEFECNDD*
Ga0110931_11336132	3300007963	Marine	MTDTKHILLTSEKVKDLVDDLGWDYDRMSTSGQETYKELCLKLGWEFETDD*
Ga0114904_10226937	3300008218	Deep Ocean	MSKEIKDLVDDLGWDYDRMSEGGKETYKKLCLKLGWEFETEENSHA*
Ga0114932_104870322	3300009481	Deep Subsurface	MTKKELDEIKNLVDDLGWDYQCLTMGGREVYKKLCLKLGWKFEW
Ga0115567_100558665	3300009508	Pelagic Marine	MSEEIKNLVEDLGWEYQRMSSIGRETYKNLCLKLGWKFELEIEDDS*
Ga0114906_11735452	3300009605	Deep Ocean	MSEEIKNLVEDLGWEYQRMSSCGRETYKNLCLKLGWKFELEIEDDN*
Ga0114906_12239584	3300009605	Deep Ocean	FTSEKVKDLVDDLGWDYDRMSTSGQETYKELCLKLGWEFETDD*
Ga0098049_12660703	3300010149	Marine	RMTKEIEKLVDDLGWEYQRMSSSGRETYKELCLKLGWEFEWDDEELG*
Ga0151669_1334324	3300011128	Marine	MSEEIKNLVEDLGWEYQRMSSIGRETYKNLCLKLGWEFEWDDKLEKEILKELR*
Ga0151669_1577081	3300011128	Marine	MSEEIKNLVEDLGWEYQRMSSIGRETYKNLCLKLGWEFEWDDKLEIE
Ga0151674_10409531	3300011252	Marine	IKNLVEDLGWEYQRMSSIDRETYKNLCLKLGWEFEWDDKLEIEILKELR*
Ga0163180_114806622	3300012952	Seawater	MNEEIKTLVDDLGWEYQRMSSSGRETYKQLCLKLGWKFEWNDEELG*
Ga0180120_100788345	3300017697	Freshwater To Marine Saline Gradient	MSEEIKNLVEDLGWEYQRMSSCGRETYKNLCLKLGWKFELEIED
Ga0180120_100959671	3300017697	Freshwater To Marine Saline Gradient	IKNLVEDLGWEYQRMSSCGRETYKNLCLKLGWKFELEIEDDS
Ga0180120_103129461	3300017697	Freshwater To Marine Saline Gradient	SEEIKNLVEDLGWEYQRMSSIGRETYKNLCLKLGWEFEWDDEELG
Ga0181387_10648883	3300017709	Seawater	MSEEIKNLVEDLGWEYQRMTSSGRETYKSLCLKLGWTFEW
Ga0181401_10441431	3300017727	Seawater	VMSEEIKNLVEDLGWEYQRMSSCGRETYKNLCLKLGWKFELEIENDSXK
Ga0181419_11324672	3300017728	Seawater	MSEEIKNLVEDLGWEYQRMTSSGRETYKNLCLKLGWKFEWDDEELG
Ga0181399_10945881	3300017742	Seawater	KNLVEDLGWEYQRMSSCGREAYKSLCLKLGWEFEWDDEELG
Ga0181402_10404592	3300017743	Seawater	MSEEIKNLVEDLGWEYQRMSSCGRETYKSLCLKLGWTFEWDDEELG
Ga0181405_10818462	3300017750	Seawater	MSEEIKNLVEDLGWEYQRMSSCGRETYKNLCFKLGWKFELEIEDDS
Ga0187221_11865081	3300017769	Seawater	IKNLVEDLGWEYQRMSSCGREAYKSLCLKLGWTFEWDDEELG
Ga0181386_12607731	3300017773	Seawater	MSEEIKNLVEDLGWEYQRMTSSGRETYKSLCLKLGWTFEWDDEE
Ga0181423_10418307	3300017781	Seawater	MSEEIKNLVEDLGWEYQRMSSCGREAYKSLCLKLGW
Ga0181423_11551011	3300017781	Seawater	EEIKNLVEDLGWEYQRMSSCGREAYKSLCLKLGWEFEWDDEELG
Ga0181552_102717873	3300017824	Salt Marsh	MSEEIKNLVEDLGWEYQRMSSCGREAYKSLCLKLGWEFEWDDEEATDEII
Ga0181577_102615171	3300017951	Salt Marsh	MSEEIKNLVEELGWEYQRMSSCGRETYKNLCLKLGWKFE
Ga0181591_102291604	3300018424	Salt Marsh	MSEEIKNLVEELGWEYQRMSSCGREAYKSLCLKLGWEFEWDDEELG
Ga0194032_10149841	3300019938	Freshwater	MSEEIKNLVEDLGWEYQRMSSIGRETYKNLCLKLGWEFEWDDKLEIEILKELR
Ga0206125_102080943	3300020165	Seawater	MSEEIKNLVEDLGWEYQRMSSCGRETYKNLCLKLGWKFELEIEDDS
Ga0181556_11136253	3300020176	Salt Marsh	MSEEIKNLVEDLGWEYQRMSSCGREAYKSLCLKLGWEFEWDDEDATDEII
Ga0211646_102945592	3300020383	Marine	MSKEIKDLVDDLGWDYDRMSESGKETYKKLCLKLGWEFETEENNHE
Ga0211528_102816071	3300020417	Marine	MDDKKLELIKKLVDDLGWEYQGMTKGGREKYKKLCKALGWEFEWDDEELG
Ga0211653_100017801	3300020421	Marine	MTKKELEEIKNLVDDLGWDYQSLTMGGREVYKKLCLKLGWKFEWDDEED
Ga0211576_105613781	3300020438	Marine	AKMSEEIKNLVEDLGWEYQRMSSCGRETYKNLCLKLGWKFELEIENDS
Ga0211638_100862761	3300020448	Marine	DLIEDLGWDYQSMTTSGRETYQELCLAFGWKFEWNEEELG
Ga0211585_1000880313	3300020477	Marine	MSEEIKDLVDDLGWDYDRMSEGGKETYKKLCLKLGWEFETEETT
Ga0213863_104027881	3300021371	Seawater	NLVEDLGWEYQRMSSCGRETYKNLCLKLGWKFELEIEDDS
Ga0213861_100836925	3300021378	Seawater	MKMSEEIKNLVEDLGWEYQRMSSCGRETYKNLCLKLGWKFELEIEDDS
Ga0213868_101088805	3300021389	Seawater	MSEEIKNLVEDLGWEYQRMTSSGRETYKNLCLKLGWEFEWDDEELG
Ga0222718_104211272	3300021958	Estuarine Water	MSEEIKNLVEDLGWEYQRMSSCGRETYKNLCLKLGWKFELEIENDS
Ga0222718_104590682	3300021958	Estuarine Water	MSEEIKNLVEDLGWEYQRMSSCGREAYKSLCLKLGWEFEWDDEELG
Ga0222718_106113871	3300021958	Estuarine Water	DKKLELIKNLVDDLGWEYQGMTKGGREQYKKLCKALGWEFEWDDEELG
Ga0222719_100373765	3300021964	Estuarine Water	MDDKKLELIKNLVDDLGWEYQGMTKGGREQYKKLCKALGWEFEWDDEELG
Ga0222719_107255272	3300021964	Estuarine Water	MSEEIKNLVEDLGWEYQRMSSCGREAYKSLCLKLGWEFEWDDEE
Ga0196883_10343243	3300022050	Aqueous	MSEEIKNLVEDLGWEYQRMSSCGREAYKSLCLKLGWEFEWDDKLEIEILKELR
Ga0196899_11009302	3300022187	Aqueous	MSEEIKNLVEDLGWEYQRMSSCGRETYKNLCLKLGWKFELEIEDE
Ga0207902_10242933	3300025046	Marine	MSEEIKDLVDDLGWDYDRMSKSGKETYKKLCLKLGWEFETQETNK
Ga0207905_10140076	3300025048	Marine	MEEIKDIVEDLGWEYQRMSSSGQESYKKLCLKLGWDFEWDEES
Ga0207906_10434212	3300025052	Marine	MTEEIKDLVDDLGWDYDRMSESGKETYKKLCLKLGWEFECNDD
Ga0208298_10832572	3300025084	Marine	VLDMNEEIKKLVDDLGWEYQRMSSSGRETYKQLCLKLGWKFEWNDEELG
Ga0208157_10015471	3300025086	Marine	MTKEIEKLVDDLGWEYQRMSSCGRETYKELCLKLGWEFEWDDEELG
Ga0208157_11178992	3300025086	Marine	MTKEIEKLVDDLGWEYQRMSSSGRETYKELCLKLGWEFEWDDEELG
Ga0208434_10447733	3300025098	Marine	MNEEIKKLVDDLGWEYQRMSSSGRETYKQLCLKLGWKFEWNDEELG
Ga0208159_10128474	3300025101	Marine	MTKEIEKLVDDLGWEYQRMSSSGRETYKELCLKLGWKFEWDDEELG
Ga0209644_10876982	3300025125	Marine	MDNKQAKALKKVQDLVDDLGWEYQRMTSSGRESYKKLCKLLGWEFVWDDEKLG
Ga0209348_12156233	3300025127	Marine	MSEEIKNLVEDLGWEYQRMSSSGRETYKELCLKLGWKFEWDDEELG
Ga0208316_10599252	3300025296	Deep Ocean	MSKEIKDLVDDLGWDYDRMSEGGKETYKKLCLKLGWEFETEENSHA
Ga0209716_10674101	3300025626	Pelagic Marine	AKMSEEIKNLVEDLGWEYQRMSSCGRETYKNLCLKLGWKFELEIEDDS
Ga0183683_10180981	3300029309	Marine	MDEKKLELIKNLVDDLGWEYQGMTKGGREQYKKLCKALGWEFEWDDEELG
Ga0183748_10079204	3300029319	Marine	MNENVKDLVDDLGWEYQRMTSSGRETYKKLCLELGWEFKWDDEELG
Ga0183748_10340881	3300029319	Marine	MNENVKDLVDDLGWEYQRMTSSGRETYKKLCLELGWE
Ga0183748_10678323	3300029319	Marine	MDDKKLELIKNLVDDLGWEYQGMTKGGREKYKKLCKALGWEFEWDDEELG
Ga0183755_100004335	3300029448	Marine	MTDTKHISLTSEKVKDLVDDLGWDYDRMSTSGQETYKELCLKLGWEFETDD
Ga0307986_102694422	3300031659	Marine	MISALNSRMNKMKNKKLELIKNLVDDLGWDYQGMTKDGRETYKKLCLSLGWEFEWDDEEL
Ga0348335_022423_2837_2986	3300034374	Aqueous	MSEEIKNLVEDLGWEYQRMSSCGREAYKSLCLKLGWEFEWDDKLEIEILK

Hidden Markov Model


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