Metagenome Family F103918

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103918
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	55 residues
Representative Sequence	MWVLVWMQLVTGMPLQYYQLNSFESRTVCEQYKEQAKIMVTNTNMIVACLNVRIQK
Number of Associated Samples	59
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	42.57 %
% of genes near scaffold ends (potentially truncated)	31.68 %
% of genes from short scaffolds (< 2000 bps)	79.21 %
Associated GOLD sequencing projects	47
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.426 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (41.584 % of family members)
Environment Ontology (ENVO)	Unclassified (87.129 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (77.228 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 16.67% β-sheet: 26.19% Coil/Unstructured: 57.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF13539	Peptidase_M15_4	38.61
PF11351	GTA_holin_3TM	32.67
PF00166	Cpn10	5.94
PF05951	Peptidase_M15_2	0.99
PF00589	Phage_integrase	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	5.94
COG3108	Uncharacterized conserved protein YcbK, DUF882 family	Function unknown [S]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.43 %
All Organisms	root	All Organisms	42.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.43 %
Viruses	superkingdom	All Organisms → Viruses	24.75 %
cellular organisms	root	All Organisms → cellular organisms	17.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	17.82 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.88 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.99 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.90 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.99 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.90 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.99 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.90 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.99 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.90 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.99 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.90 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.99 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.90 %
Formosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Formosa	0.99 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.90 %
unclassified Formosa	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Formosa → unclassified Formosa	0.99 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.90 %
Formosa sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Formosa → unclassified Formosa → Formosa sp.	0.99 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004448\|Ga0065861_1019957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1686	Open in IMG/M
3300004448\|Ga0065861_1062647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	941	Open in IMG/M
3300004448\|Ga0065861_1063318	Not Available	500	Open in IMG/M
3300004460\|Ga0066222_1073748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300004461\|Ga0066223_1044017	Not Available	1399	Open in IMG/M
3300006025\|Ga0075474_10042647	All Organisms → Viruses → Predicted Viral	1557	Open in IMG/M
3300006164\|Ga0075441_10016068	All Organisms → Viruses → Predicted Viral	3129	Open in IMG/M
3300006164\|Ga0075441_10020869	Not Available	2711	Open in IMG/M
3300006164\|Ga0075441_10104430	All Organisms → Viruses → Predicted Viral	1085	Open in IMG/M
3300006164\|Ga0075441_10106657	Not Available	1072	Open in IMG/M
3300006164\|Ga0075441_10139185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	918	Open in IMG/M
3300006165\|Ga0075443_10028744	All Organisms → Viruses → Predicted Viral	1858	Open in IMG/M
3300006165\|Ga0075443_10030232	All Organisms → Viruses → Predicted Viral	1809	Open in IMG/M
3300006190\|Ga0075446_10031355	All Organisms → Viruses → Predicted Viral	1719	Open in IMG/M
3300006190\|Ga0075446_10074520	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Formosa → unclassified Formosa → Formosa sp.	1018	Open in IMG/M
3300006190\|Ga0075446_10098478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	858	Open in IMG/M
3300006190\|Ga0075446_10171681	Not Available	612	Open in IMG/M
3300006191\|Ga0075447_10073627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1216	Open in IMG/M
3300006193\|Ga0075445_10111942	All Organisms → Viruses → Predicted Viral	1007	Open in IMG/M
3300006810\|Ga0070754_10328390	Not Available	681	Open in IMG/M
3300006920\|Ga0070748_1218092	Not Available	693	Open in IMG/M
3300006947\|Ga0075444_10060197	Not Available	1762	Open in IMG/M
3300006947\|Ga0075444_10124503	All Organisms → Viruses → Predicted Viral	1104	Open in IMG/M
3300006947\|Ga0075444_10307406	Not Available	611	Open in IMG/M
3300008221\|Ga0114916_1018258	All Organisms → cellular organisms → Bacteria	2458	Open in IMG/M
3300008221\|Ga0114916_1098381	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300009172\|Ga0114995_10005327	Not Available	8423	Open in IMG/M
3300009172\|Ga0114995_10012952	Not Available	5146	Open in IMG/M
3300009172\|Ga0114995_10171233	All Organisms → Viruses → Predicted Viral	1209	Open in IMG/M
3300009172\|Ga0114995_10340572	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300009422\|Ga0114998_10004864	Not Available	9694	Open in IMG/M
3300009422\|Ga0114998_10047717	All Organisms → Viruses → Predicted Viral	2269	Open in IMG/M
3300009422\|Ga0114998_10095059	Not Available	1475	Open in IMG/M
3300009422\|Ga0114998_10332072	Not Available	711	Open in IMG/M
3300009422\|Ga0114998_10478777	Not Available	583	Open in IMG/M
3300009432\|Ga0115005_10510814	Not Available	958	Open in IMG/M
3300009441\|Ga0115007_11232985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300009512\|Ga0115003_10113558	All Organisms → Viruses → Predicted Viral	1660	Open in IMG/M
3300009526\|Ga0115004_10433415	Not Available	778	Open in IMG/M
3300009601\|Ga0114914_1010329	Not Available	1733	Open in IMG/M
3300009601\|Ga0114914_1013754	Not Available	1481	Open in IMG/M
3300009785\|Ga0115001_10070189	Not Available	2300	Open in IMG/M
3300009785\|Ga0115001_10163669	All Organisms → Viruses → Predicted Viral	1448	Open in IMG/M
3300009785\|Ga0115001_10240819	Not Available	1160	Open in IMG/M
3300009785\|Ga0115001_10997975	All Organisms → cellular organisms → Bacteria → Proteobacteria	501	Open in IMG/M
3300010883\|Ga0133547_11642354	All Organisms → Viruses → Predicted Viral	1198	Open in IMG/M
3300020253\|Ga0211685_1005552	All Organisms → Viruses → Predicted Viral	1984	Open in IMG/M
3300020376\|Ga0211682_10266052	Not Available	651	Open in IMG/M
3300022057\|Ga0212025_1004541	Not Available	1795	Open in IMG/M
3300022158\|Ga0196897_1042878	Not Available	537	Open in IMG/M
3300025048\|Ga0207905_1009793	All Organisms → cellular organisms → Bacteria	1691	Open in IMG/M
3300025137\|Ga0209336_10004798	Not Available	6055	Open in IMG/M
3300025138\|Ga0209634_1079671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1509	Open in IMG/M
3300025138\|Ga0209634_1293336	Not Available	563	Open in IMG/M
3300025237\|Ga0208031_1000714	Not Available	5677	Open in IMG/M
3300025237\|Ga0208031_1002654	All Organisms → Viruses → Predicted Viral	2514	Open in IMG/M
3300025266\|Ga0208032_1001542	All Organisms → Viruses	9776	Open in IMG/M
3300025266\|Ga0208032_1004075	Not Available	5391	Open in IMG/M
3300025266\|Ga0208032_1012992	Not Available	2600	Open in IMG/M
3300025266\|Ga0208032_1033065	Not Available	1350	Open in IMG/M
3300025266\|Ga0208032_1039182	All Organisms → Viruses → Predicted Viral	1191	Open in IMG/M
3300025276\|Ga0208814_1002705	All Organisms → Viruses	7546	Open in IMG/M
3300025276\|Ga0208814_1060983	Not Available	1062	Open in IMG/M
3300025276\|Ga0208814_1115617	Not Available	651	Open in IMG/M
3300027522\|Ga0209384_1019589	Not Available	2174	Open in IMG/M
3300027668\|Ga0209482_1141858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	717	Open in IMG/M
3300027686\|Ga0209071_1079373	Not Available	972	Open in IMG/M
3300027686\|Ga0209071_1128346	Not Available	731	Open in IMG/M
3300027687\|Ga0209710_1003383	All Organisms → cellular organisms → Bacteria	10758	Open in IMG/M
3300027687\|Ga0209710_1244975	Not Available	583	Open in IMG/M
3300027704\|Ga0209816_1057748	All Organisms → Viruses → Predicted Viral	1702	Open in IMG/M
3300027714\|Ga0209815_1143741	Not Available	765	Open in IMG/M
3300027714\|Ga0209815_1226170	Not Available	570	Open in IMG/M
3300027752\|Ga0209192_10052658	All Organisms → Viruses → Predicted Viral	1822	Open in IMG/M
3300027780\|Ga0209502_10223294	Not Available	853	Open in IMG/M
3300027788\|Ga0209711_10058024	All Organisms → Viruses	2096	Open in IMG/M
3300027791\|Ga0209830_10174962	Not Available	1014	Open in IMG/M
3300027791\|Ga0209830_10215472	Not Available	888	Open in IMG/M
3300028122\|Ga0256371_119953	Not Available	559	Open in IMG/M
3300028123\|Ga0256372_1029221	Not Available	625	Open in IMG/M
3300031510\|Ga0308010_1135859	Not Available	928	Open in IMG/M
3300031519\|Ga0307488_10065976	Not Available	2739	Open in IMG/M
3300031519\|Ga0307488_10365132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	905	Open in IMG/M
3300031594\|Ga0302131_1099606	Not Available	1017	Open in IMG/M
3300031599\|Ga0308007_10088662	Not Available	1143	Open in IMG/M
3300031599\|Ga0308007_10090851	Not Available	1127	Open in IMG/M
3300031599\|Ga0308007_10167783	Not Available	777	Open in IMG/M
3300031605\|Ga0302132_10428567	Not Available	592	Open in IMG/M
3300031621\|Ga0302114_10034039	All Organisms → Viruses	2611	Open in IMG/M
3300031621\|Ga0302114_10123897	Not Available	1162	Open in IMG/M
3300031622\|Ga0302126_10179458	All Organisms → cellular organisms → Bacteria → Proteobacteria	768	Open in IMG/M
3300031626\|Ga0302121_10049044	Not Available	1316	Open in IMG/M
3300031627\|Ga0302118_10171334	Not Available	1052	Open in IMG/M
3300031630\|Ga0308004_10076239	Not Available	1447	Open in IMG/M
3300031637\|Ga0302138_10039260	All Organisms → Viruses → Predicted Viral	1891	Open in IMG/M
3300031637\|Ga0302138_10180918	Not Available	711	Open in IMG/M
3300031638\|Ga0302125_10003524	Not Available	6824	Open in IMG/M
3300031638\|Ga0302125_10119012	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	856	Open in IMG/M
3300031676\|Ga0302136_1121948	Not Available	826	Open in IMG/M
3300031700\|Ga0302130_1084424	All Organisms → Viruses → Predicted Viral	1021	Open in IMG/M
3300033742\|Ga0314858_172648	Not Available	555	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	55.45%
Unclassified	Environmental → Aquatic → Marine → Unclassified	29.70%
Coastal	Environmental → Aquatic → Marine → Coastal	14.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	55.45%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	29.70%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	14.85%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	41.58%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	24.75%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	13.86%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.95%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	4.95%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.95%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	2.97%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004461	Marine viral communities from Newfoundland, Canada BC-2	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006165	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA	Environmental	Open in IMG/M
3300006190	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA	Environmental	Open in IMG/M
3300006191	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA	Environmental	Open in IMG/M
3300006193	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300006947	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA	Environmental	Open in IMG/M
3300008221	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009422	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138	Environmental	Open in IMG/M
3300009432	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome	Environmental	Open in IMG/M
3300009441	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300009601	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_38	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300020253	Marine microbial communities from Tara Oceans - TARA_B100000780 (ERX555982-ERR598945)	Environmental	Open in IMG/M
3300020376	Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX555997-ERR599121)	Environmental	Open in IMG/M
3300022057	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)	Environmental	Open in IMG/M
3300022158	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3)	Environmental	Open in IMG/M
3300025048	Marine viral communities from the Subarctic Pacific Ocean - LP-49 (SPAdes)	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025237	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_38 (SPAdes)	Environmental	Open in IMG/M
3300025266	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66 (SPAdes)	Environmental	Open in IMG/M
3300025276	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)	Environmental	Open in IMG/M
3300027522	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)	Environmental	Open in IMG/M
3300027668	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)	Environmental	Open in IMG/M
3300027686	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA (SPAdes)	Environmental	Open in IMG/M
3300027687	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)	Environmental	Open in IMG/M
3300027704	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes)	Environmental	Open in IMG/M
3300027714	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)	Environmental	Open in IMG/M
3300027752	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)	Environmental	Open in IMG/M
3300027780	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)	Environmental	Open in IMG/M
3300027788	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)	Environmental	Open in IMG/M
3300027791	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)	Environmental	Open in IMG/M
3300028122	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SI3M	Environmental	Open in IMG/M
3300028123	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SI3L	Environmental	Open in IMG/M
3300031510	Marine microbial communities from water near the shore, Antarctic Ocean - #129	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031594	Marine microbial communities from Western Arctic Ocean, Canada - CB9_20m	Environmental	Open in IMG/M
3300031599	Marine microbial communities from water near the shore, Antarctic Ocean - #71	Environmental	Open in IMG/M
3300031605	Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1	Environmental	Open in IMG/M
3300031621	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Surface	Environmental	Open in IMG/M
3300031622	Marine microbial communities from Western Arctic Ocean, Canada - CB4_20m	Environmental	Open in IMG/M
3300031626	Marine microbial communities from Western Arctic Ocean, Canada - CB21_surface	Environmental	Open in IMG/M
3300031627	Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1	Environmental	Open in IMG/M
3300031630	Marine microbial communities from water near the shore, Antarctic Ocean - #38	Environmental	Open in IMG/M
3300031637	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_32.1	Environmental	Open in IMG/M
3300031638	Marine microbial communities from Western Arctic Ocean, Canada - CB4_surface	Environmental	Open in IMG/M
3300031676	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_20m	Environmental	Open in IMG/M
3300031700	Marine microbial communities from Western Arctic Ocean, Canada - CB9_surface	Environmental	Open in IMG/M
3300033742	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawater	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0065861_10199572	3300004448	Marine	MWVLIWIQVTVGTPVEYYQLNSFDSRTVCEQYREDAEVLVTTTNMAVACLSVRINQ*
Ga0065861_10626473	3300004448	Marine	VWVLVWMQLITGMPLQYYQLNSFESRTVCEQYKEQAKILVTNTNMIVACLNVRI
Ga0065861_10633182	3300004448	Marine	MWVLVWIQFVVGMPLAHFQLNSFESRTICEQYKEMAKVMITDNNMTVACLNVRIKQ*
Ga0066222_10737482	3300004460	Marine	VWVLVWIQFVVGMPLSYFQLNSFETRTVCELYKEQAQVMVTDNNMAVACMSVRIEK*
Ga0066223_10440174	3300004461	Marine	VVWVLVWMQLMTGMPLQYYQLNSFESRTLCEQYKEQAKILVTNTNMTVACLNVRIQK*
Ga0075474_100426472	3300006025	Aqueous	MWVLVWMQLVTGMPLQYYQLNSFESRTVCEQYKEQAKIMVTNTNMIVACLNVRIQK*
Ga0075441_100160682	3300006164	Marine	VWVLVWIQLITGMPLEYYQLDSFDSKTVCEQYRQRAEILVTHTNMTVVCLSVRIQK*
Ga0075441_100208693	3300006164	Marine	MWVLVWMQFTVGMPLQYYQLNSFESRTICEQYKEQAKVMVTSNNMAVACLIVRIEK*
Ga0075441_101044301	3300006164	Marine	VWVLVWIQFVVGMPINYYQLNSFEGRTECEVYKELAKVMVTDNNMAVACFNVRIEQ*
Ga0075441_101066573	3300006164	Marine	MWVLIWMQFVVGMPMEYFQLNSFESRTVCEVYKELAKVMVTDNNMSVACLNVRIEK*
Ga0075441_101391851	3300006164	Marine	VWVLVWIQFVVGMPINYYQLNSFSSRTVCEQYKEQAKVMVTNNNMIVACLIVRIEQ*
Ga0075443_100287443	3300006165	Marine	MWVLVWMQFVVGVPLEHFQLNSFESRTVCELYKEQAKVMVTSNNMAVACLNVRIEQ*
Ga0075443_100302325	3300006165	Marine	MWVLVWMQFVVGMPLQYFQLNSFETRTLCELYKEQAKVMVTSNNMAVACLIVRIEK*
Ga0075446_100313551	3300006190	Marine	TGMPLEYYQLDSFDSKTVCEQYRQRAEILVTHTNMTVVCLSVRIQK*
Ga0075446_100745202	3300006190	Marine	VWVLVWIQLITGMPLEYYQLDSFDSRTVCEQYRQRAEILVTHTNMTVVCLSVRIKK*
Ga0075446_100984784	3300006190	Marine	VWVLVWMQLTIGMPLQYYQLNSFDSRTICDQYRQRAEILVTANNMTVACLNVRIEK*
Ga0075446_101716812	3300006190	Marine	MWVLVWIQLMTGMPLQYYQLDSFDSRTVCEQYRQRAEILVTNTNMIVACLSVRIQK*
Ga0075447_100736272	3300006191	Marine	VWVLVWMQLIIGMPLQYYQLDSFDSRTVCEQYRQRAEVLVTHTNMIVACLNVRIQK*
Ga0075445_101119422	3300006193	Marine	MQFVVGVPLEHFQLNSFESRTVCELYKEQAKVMVTSNNMAVACLNVRIEQ*
Ga0070754_103283902	3300006810	Aqueous	VWVLVWMQLMTGMPLQYYQLNSFESRTLCEQYKEQAKILVTNTNMTVACLNVRIQK*
Ga0070748_12180922	3300006920	Aqueous	MWVLVWMQLMTGMPLQYYQLNSFESRTLCEQYKEQAKILVTNTNMTVACLNVRIQK*
Ga0075444_100601974	3300006947	Marine	VWVLVWMQFVPGVPLEWFQLNSFESRTVCELYKEQSKVMVTNNSMTVACLNVRIEK*
Ga0075444_101245032	3300006947	Marine	MWVLVWMQLVVGVPMHYFQLNSFESRTVCEQYKELAKIMVTDTNMAVACLNVRVKENEL*
Ga0075444_103074061	3300006947	Marine	VLVWMQFVVGMPINYYQLNSFEGRTECEVYKDLAKVMVTDNNMAVACFNVRVEQ*
Ga0114916_10182582	3300008221	Deep Ocean	MQFVVGMPINYYQLNSFEGRTECEVYKDLAKVMVTDNNTAVACFNVRVEQ*
Ga0114916_10983811	3300008221	Deep Ocean	MWVLVWMQFVVGVPLEHFQLNSFESRTVCELYKEQAKVMVTSNNMAVACLNVRIEK*
Ga0114995_1000532713	3300009172	Marine	MWVLVWMQLVTGMPLQYYQLNSFESRTICEQYKEQAKIMVTNTNMIVACLNVRIQK*
Ga0114995_100129528	3300009172	Marine	MTGMPLQYYQLNSFESRTLCEQYKEQAKILVTNTNMTVACLNVRIQK*
Ga0114995_101712331	3300009172	Marine	SSLVGRSDLMWVLIWMQVTVGIPVEYYQLNSFDSRTVCEQYREDAEVLVTTTNMAVACLSVRINK*
Ga0114995_103405722	3300009172	Marine	VWVLVWIHFVVGMPLEWFQLNSFESRTVCELYKEQAKVMVTDNNMAVACMSVRIEK*
Ga0114998_100048647	3300009422	Marine	MWVLIWMQVTVGIPVEYYQLNSFDSRTVCEQYREDAEVLVTTTNMAVACLSVRINQ*
Ga0114998_100477172	3300009422	Marine	VWVLVWMQFVVGMPINYYQLNSFESRTVCEQYKEQAKILVTNNNMTVACLNVRIQK*
Ga0114998_100950593	3300009422	Marine	VWVLVWMQFVVGMPMEYFQLNSFESRTVCEVYKELAKVMVTDNNMTVACLNVRIQK*
Ga0114998_103320722	3300009422	Marine	VWVLVWIQLMTGMPLQYYQLNSFESRTVCEQYKEQAKIMVTNTNMIVACLNVRIQK*
Ga0114998_104787773	3300009422	Marine	WMQVTVGTPVEYYQLNSFDSRTVCEQYREDAEVLVTTTNMAVACLSVRINQ*
Ga0115005_105108142	3300009432	Marine	VWVLVWIQFVVGMPLTYFQLNSFEGEKVCEHYKKIAKVMITDNNMTVACLNVRIEK*
Ga0115007_112329851	3300009441	Marine	VWVLVWMQLITGMPLQYYQLNSFESRTECELYKEMAKVMVTDNNMTVACLNV
Ga0115003_101135583	3300009512	Marine	MQVTVGIPVEYYQLNSFDSRTVCEQYREDAEVLVTTTNMAVACLSVRINQ*
Ga0115004_104334151	3300009526	Marine	MWVLVWMQLVTGMPLQYYQLNSFESRTVCEQYKEQAKIMVTNTNMIV
Ga0114914_10103294	3300009601	Deep Ocean	MWVLVWMQFVVGMPLEHFQLNSFETRTLCELYKEQAKVMVTSNNMAVACLNVRIEQ*
Ga0114914_10137543	3300009601	Deep Ocean	VWVLVWMQLIIGMPLQYYQLDSFDSRTVCEQYRQRAEVLVTHTNMIVACLSVRIQK*
Ga0115001_100701898	3300009785	Marine	MWVLVWMQLVTGMPLQYYQLNSFESRTVCEQYKEQAKIMVTNTNMIVACLNVRIQ
Ga0115001_101636696	3300009785	Marine	VWVLVWIQFVAGMPLTHFQLNSFEGEKVCEHYKEMAKVMVTDNNMTVACLNVRIKQ*
Ga0115001_102408193	3300009785	Marine	MWVLVWMQFVVGMPMEYFQLNSFESRTVCEVYKELAKVMVTDNNMTVACLNVRIQK*
Ga0115001_109979751	3300009785	Marine	VWVLVWMQLVTGMPLQYYQLNSFESRTVCEQYKEQAKIMVTNTNMIVACLNVRIQ
Ga0133547_116423543	3300010883	Marine	WVLIWMQVTVGIPVEYYQLNSFDSRTVCEQYREDAEVLVTTTNMAVACLSVRINQ*
Ga0211685_10055525	3300020253	Marine	MWVLVWIQFIPGVPVQYYQLNDFGNRTECEQYKEQAKIMATSSNTVVACLSIRGRRE
Ga0211682_102660522	3300020376	Marine	MWVLVWMQLVVGVPMHYFQLNSFESRTVCEQYKELAKIMVTDTNMAVACLNVRVKENEL
Ga0212025_10045413	3300022057	Aqueous	MWVLVWMQLVTGMPLQYYQLNSFESRTVCEQYKEQAKIMVTNTNMIVACLNVRIQK
Ga0196897_10428782	3300022158	Aqueous	EVLHLMWVLVWMQLVTGMPLQYYQLNSFESRTVCEQYKEQAKIMVTNTNMIVACLNVRIQ
Ga0207905_10097937	3300025048	Marine	MWVLVWVQFVVGMPLAHFQLNSFESRTICEQYKEMAKVMITDNNMTVACLNVR
Ga0209336_100047988	3300025137	Marine	MWVLVWIQFVVGMPLAHFQLNSFESRTICEQYKEMAKVMITDNNMTVACLNVRIKQ
Ga0209634_10796715	3300025138	Marine	MWVLVWVQFVVGMPLAHFQLNSFESRTICEVYKELAKVMVTDNNMTVACLNVRIEQ
Ga0209634_12933362	3300025138	Marine	VWVLVWIQLVVGMPLSYFQLNSFETRTVCELYKEQAQVMVTDNNMAVACMSVRIEK
Ga0208031_100071410	3300025237	Deep Ocean	MWVLVWMQFVVGTPLQYFQLNSFESRTVCELYKEQAKVMVTSNNMAVACLIVRIEK
Ga0208031_10026546	3300025237	Deep Ocean	MWVLVWMQFVVGVPLEHFQLNSFESRTVCELYKEQAKVMVTSNNMAVACLNVRIEQ
Ga0208032_100154210	3300025266	Deep Ocean	MWVLVWIQLMTGMPLQYYQLDSFDSRTVCEQYRQRAEILVTNTNMIVACLSVRIQK
Ga0208032_10040759	3300025266	Deep Ocean	VWVLVWIQLITGMPLEYYQLDSFDSKTVCEQYRQRAEILVTHTNMTVVCLSVRIQK
Ga0208032_10129927	3300025266	Deep Ocean	MWVLVWMQFVVGMPLQYFQLNSFETRTLCELYKEQAKVMVTSNNMAVACLIVRIEK
Ga0208032_10330653	3300025266	Deep Ocean	MWVLIWMQFVVGMPMEYFQLNSFESRTVCEVYKELAKVMVTDNNMSVACLNVRIEK
Ga0208032_10391823	3300025266	Deep Ocean	VWVLVWIQFVVGMPINYYQLNSFEGRTECEVYKELAKVMVTDNNMAVACFNVRIEQ
Ga0208814_100270513	3300025276	Deep Ocean	MWVLVWMQFVVGVPLEHFQLNSFESRTVCELYKEQAKVMVTSNNMTVACLNVRIEK
Ga0208814_10609832	3300025276	Deep Ocean	MWVLVWMQFTVGMPLQYYQLNSFESRTICEQYKEQAKVMVTSNNMAVACLIVRIEK
Ga0208814_11156173	3300025276	Deep Ocean	MWVLVWMQFVVGVPLEHFQLNSFESRTVCELYKEQAKVMVTSNNMAVACLNVRIEK
Ga0209384_10195891	3300027522	Marine	GMPLEYYQLDSFDSKTVCEQYRQRAEILVTHTNMTVVCLSVRIQK
Ga0209482_11418581	3300027668	Marine	VWVLVWMQLIIGMPLQYYQLDSFDSRTVCEQYRQRAEVLVTHTNMIVACLS
Ga0209071_10793733	3300027686	Marine	MWVLVWMQLVVGVPMHYFQLNSFESRTVCEQYKELAKIMVTDTNMAVACLNVRVK
Ga0209071_11283461	3300027686	Marine	WVLVWMQLVVGVPMHYFQLNSFESRTVCEQYKELAKIMVTDTNMAVACLNVRVKENEL
Ga0209710_10033836	3300027687	Marine	MWVLIWMQVTVGIPVEYYQLNSFDSRTVCEQYREDAEVLVTTTNMAVACLSVRINQ
Ga0209710_12449753	3300027687	Marine	WMQVTVGTPVEYYQLNSFDSRTVCEQYREDAEVLVTTTNMAVACLSVRINQ
Ga0209816_10577485	3300027704	Marine	MWVLVWMQFVVGMPLEHFQLNSFETRTLCELYKEQAKVMVTSNNMTVACLIVRIEK
Ga0209815_11437411	3300027714	Marine	FVVGMPINYYQLNSFSSRTVCEQYKEQAKVMVTNNNMIVACLIVRIEQ
Ga0209815_12261701	3300027714	Marine	VLVWMQFVVGMPINYYQLNSFEGRTECEVYKDLAKVMVTDNNMAVACFNVRVEQ
Ga0209192_100526583	3300027752	Marine	MQVTVGIPVEYYQLNSFDSRTVCEQYREDAEVLVTTTNMAVACLSVRINQ
Ga0209502_102232941	3300027780	Marine	MWVLVWMQLVTGMPLQYYQLNSFESRTICEQYKEQAKIMVTNTNMIVACL
Ga0209711_100580241	3300027788	Marine	WIQLMTGMPLQYYQLNSFESRTLCEQYKEQAKILVTNTNMTVACLNVRIQK
Ga0209830_101749623	3300027791	Marine	MWVLIWIQVTVGTPVEYYQLNSFDSRTVCEQYREDAEVLVTTTNMAVACLSVRINQ
Ga0209830_102154722	3300027791	Marine	MWVLVWMQFVVGMPMEYFQLNSFESRTVCEVYKELAKVMVTDNNMTVACLNVRIQK
Ga0256371_1199532	3300028122	Sea-Ice Brine	MWVLVWMQLMTGMPLQYYQLNSFESRTLCEQYKEQAKILVTNTNMTVACLNVRIQK
Ga0256372_10292212	3300028123	Sea-Ice Brine	VWVLVWIQLMTGMPLQYYQLNSFESRTLCEQYKEQAKILVTNTNMAVACLNVRIQK
Ga0308010_11358591	3300031510	Marine	MWVLVWMQFVVGVPLEHFQLNSFESRTVCELYKEQAKVMVTSNNMAVA
Ga0307488_100659761	3300031519	Sackhole Brine	MWVLVWMQLMTGMPLQYYQLNSFESRTLCEQYKEQAKILVTNTNMTVACLNVRI
Ga0307488_103651322	3300031519	Sackhole Brine	MWVLVWMQFVVGMPMEYFQLNSFESRTVCEVYKELAKVMVTDNNMTVACLNVRIEQ
Ga0302131_10996065	3300031594	Marine	MWVLVWMQLVTGMPLQYYQLNSFESRTICEQYKEQAKIMVTNTNMIVACLNVRIQK
Ga0308007_100886624	3300031599	Marine	QLVVGVPMHYFQLNSFESRTVCEQYKELAKIMVTDTNMAVACLNVRVKENEL
Ga0308007_100908511	3300031599	Marine	MWVLVWMQLVVGVPMHYFQLNSFESRTVCEQYKELAKIMVTDTNMAV
Ga0308007_101677831	3300031599	Marine	KRIADAASLSGKQIVWVLVWIQLITGMPLEYYQLDSFDSRTVCEQYRQRAEILVTNTNMIVACLSVRIQK
Ga0302132_104285671	3300031605	Marine	VWVLVWMQFVVGMPMEYFQLNSFESRTVCEVYKELAKVMVTDNNMTVACLNVRIEQ
Ga0302114_100340393	3300031621	Marine	VWVLVWMQLMTGMPLQYYQLNSFESRTLCEQYKEQAKILVTNTNMTVACLNVRIQK
Ga0302114_101238975	3300031621	Marine	MWVLVWMQLVTGMPLQYYQLNSFESRTICEQYKEQAKIMVTNTNMIVAYLNVRIQK
Ga0302126_101794583	3300031622	Marine	VWVLVWIQFVAGMPLTHFQLNSFEGEKVCEHYKEMAKVMVTDNNMTVACLNVRIKQ
Ga0302121_100490441	3300031626	Marine	VWVLVWIQFVVGMPLAHFQLNSFEGEKVCEHYKEMAKVMVTDNNMTVACLNVRIKQ
Ga0302118_101713343	3300031627	Marine	VWVLVWMQFVVGMPMEYFQLNSFESRTVCEVYKELAKVMVTDNNMTVACLNVRIEK
Ga0308004_100762392	3300031630	Marine	MQFVVGTPLQYFQLNSFESRTVCELYKEQAKVMVTSNNMAVACLIVRIEK
Ga0302138_100392601	3300031637	Marine	VVWVLVWMQFVVGMPMEYFQLNSFESRTVCEVYKELAKVMVTDNNMTVACLNVRIEQ
Ga0302138_101809181	3300031637	Marine	LVWMQLVTGMPLQYYQLNSFESRTVCEQYKEQAKIMVTNTNMIVACLNVRVQK
Ga0302125_100035241	3300031638	Marine	GRSDLMWVLIWMQVTVGIPVEYYQLNSFDSRTVCEQYREDAEVLVTTTNMAVACLSVRIN
Ga0302125_101190122	3300031638	Marine	VWVLVWMQFVVGMPMEYFQLNSFESRTVCEVYKELAKVMVTDNNMTVACLNVRIQK
Ga0302136_11219483	3300031676	Marine	MWVLVWMQLVTGMPLQYYQLNSFESRTICEQYKEQAKIMVTNTNMIVACLNVRVQK
Ga0302130_10844242	3300031700	Marine	MQFVVGMPINYYQLNSFEGRTECEVYKDLAKVMVTDNNMAVACFNVRVEQ
Ga0314858_172648_2_175	3300033742	Sea-Ice Brine	MAKEEVLHLMWVLVWMQLVTGMPLQYYQLNSFESRTVCEQYKEQAKIMVTNTNMIVAC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103918

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences