Metagenome / Metatranscriptome Family F103998

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103998
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	94 residues
Representative Sequence	MSDLAYFEYALVLPEERYLIEVQTRNPATGKAREQDELEKIAKEALITVVGQKGDDLEKKLNPNPISEDEAQGLTKVQQLLPGPDCAVYLVE
Number of Associated Samples	66
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	49.50 %
% of genes near scaffold ends (potentially truncated)	43.56 %
% of genes from short scaffolds (< 2000 bps)	82.18 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.396 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.663 % of family members)
Environment Ontology (ENVO)	Unclassified (47.525 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.327 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.70% β-sheet: 20.65% Coil/Unstructured: 45.65%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF01746	tRNA_m1G_MT	27.72
PF00912	Transgly	6.93
PF06863	DUF1254	2.97
PF01609	DDE_Tnp_1	0.99
PF00857	Isochorismatase	0.99
PF13229	Beta_helix	0.99
PF00589	Phage_integrase	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	6.93
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	6.93
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	6.93
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	2.97
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.99
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.99
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.99
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.99
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.99
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.99
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.99
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
All Organisms	root	All Organisms	39.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
cellular organisms	root	All Organisms → cellular organisms	39.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	8.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	8.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.97 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.99 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.99 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.99 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.99 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.98 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.99 %
Gammaproteobacteria bacterium SG8_30	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium SG8_30	0.99 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.98 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.99 %
Gammaproteobacteria bacterium SG8_30	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium SG8_30	0.99 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105639280	Not Available	990	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105639793	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300000955\|JGI1027J12803_101624019	Not Available	807	Open in IMG/M
3300001661\|JGI12053J15887_10285209	Not Available	811	Open in IMG/M
3300002245\|JGIcombinedJ26739_100182247	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1987	Open in IMG/M
3300004631\|Ga0058899_11953517	Not Available	682	Open in IMG/M
3300005332\|Ga0066388_102230809	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300005332\|Ga0066388_104541464	Not Available	707	Open in IMG/M
3300005332\|Ga0066388_107673944	Not Available	541	Open in IMG/M
3300005445\|Ga0070708_100034795	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4384	Open in IMG/M
3300005467\|Ga0070706_100468645	Not Available	1172	Open in IMG/M
3300005467\|Ga0070706_100521625	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300005764\|Ga0066903_101510315	Not Available	1269	Open in IMG/M
3300005764\|Ga0066903_101779913	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300010048\|Ga0126373_13289182	Not Available	503	Open in IMG/M
3300010154\|Ga0127503_10958470	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300010360\|Ga0126372_11040560	Not Available	833	Open in IMG/M
3300010376\|Ga0126381_100677358	All Organisms → cellular organisms → Bacteria	1473	Open in IMG/M
3300010376\|Ga0126381_102128656	Not Available	807	Open in IMG/M
3300011120\|Ga0150983_15245459	Not Available	643	Open in IMG/M
3300011120\|Ga0150983_16367252	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300012202\|Ga0137363_11144035	Not Available	662	Open in IMG/M
3300012205\|Ga0137362_10685308	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300012362\|Ga0137361_10528490	Not Available	1083	Open in IMG/M
3300012362\|Ga0137361_10988603	Not Available	761	Open in IMG/M
3300012582\|Ga0137358_10830681	Not Available	611	Open in IMG/M
3300012923\|Ga0137359_10047365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium SG8_30	3735	Open in IMG/M
3300012948\|Ga0126375_11544267	Not Available	569	Open in IMG/M
3300012971\|Ga0126369_10594926	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1175	Open in IMG/M
3300012971\|Ga0126369_10838941	Not Available	1003	Open in IMG/M
3300016270\|Ga0182036_10174111	Not Available	1554	Open in IMG/M
3300016294\|Ga0182041_10004482	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	7465	Open in IMG/M
3300016294\|Ga0182041_10074188	All Organisms → cellular organisms → Bacteria	2406	Open in IMG/M
3300016294\|Ga0182041_12138671	Not Available	522	Open in IMG/M
3300016319\|Ga0182033_10142873	All Organisms → cellular organisms → Bacteria	1835	Open in IMG/M
3300016319\|Ga0182033_10267430	Not Available	1397	Open in IMG/M
3300016319\|Ga0182033_10830118	Not Available	816	Open in IMG/M
3300016357\|Ga0182032_10363374	Not Available	1161	Open in IMG/M
3300016357\|Ga0182032_10809453	Not Available	792	Open in IMG/M
3300016371\|Ga0182034_10205255	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300016371\|Ga0182034_10566960	Not Available	955	Open in IMG/M
3300016387\|Ga0182040_10888245	Not Available	738	Open in IMG/M
3300016404\|Ga0182037_10243071	Not Available	1420	Open in IMG/M
3300016404\|Ga0182037_10245228	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300016445\|Ga0182038_10079016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2315	Open in IMG/M
3300016445\|Ga0182038_10709052	Not Available	877	Open in IMG/M
3300016445\|Ga0182038_11117552	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300021088\|Ga0210404_10129687	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300021171\|Ga0210405_10046542	All Organisms → cellular organisms → Bacteria	3440	Open in IMG/M
3300021171\|Ga0210405_10272404	Not Available	1339	Open in IMG/M
3300021178\|Ga0210408_10195625	Not Available	1607	Open in IMG/M
3300021560\|Ga0126371_10097492	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2921	Open in IMG/M
3300021560\|Ga0126371_10202453	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2081	Open in IMG/M
3300022531\|Ga0242660_1227323	Not Available	523	Open in IMG/M
3300022533\|Ga0242662_10219999	Not Available	605	Open in IMG/M
3300022724\|Ga0242665_10083359	Not Available	919	Open in IMG/M
3300025910\|Ga0207684_10137537	All Organisms → cellular organisms → Bacteria	2098	Open in IMG/M
3300025922\|Ga0207646_10127178	Not Available	2291	Open in IMG/M
3300027182\|Ga0208952_1009174	Not Available	537	Open in IMG/M
3300027371\|Ga0209418_1024505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1025	Open in IMG/M
3300027651\|Ga0209217_1091325	Not Available	877	Open in IMG/M
3300027727\|Ga0209328_10243832	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300027738\|Ga0208989_10006376	All Organisms → cellular organisms → Bacteria	3979	Open in IMG/M
3300031015\|Ga0138298_1142125	Not Available	522	Open in IMG/M
3300031057\|Ga0170834_112381850	Not Available	589	Open in IMG/M
3300031544\|Ga0318534_10601601	Not Available	625	Open in IMG/M
3300031573\|Ga0310915_10324804	Not Available	1089	Open in IMG/M
3300031715\|Ga0307476_10662858	Not Available	773	Open in IMG/M
3300031719\|Ga0306917_10013846	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4749	Open in IMG/M
3300031719\|Ga0306917_10904373	Not Available	690	Open in IMG/M
3300031744\|Ga0306918_10471386	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300031744\|Ga0306918_10752370	Not Available	762	Open in IMG/M
3300031753\|Ga0307477_10563812	Not Available	770	Open in IMG/M
3300031771\|Ga0318546_10894778	Not Available	625	Open in IMG/M
3300031799\|Ga0318565_10190722	Not Available	997	Open in IMG/M
3300031833\|Ga0310917_10031591	All Organisms → cellular organisms → Bacteria	3135	Open in IMG/M
3300031833\|Ga0310917_10037764	All Organisms → cellular organisms → Bacteria	2900	Open in IMG/M
3300031879\|Ga0306919_10141021	All Organisms → cellular organisms → Bacteria	1748	Open in IMG/M
3300031879\|Ga0306919_10768701	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300031890\|Ga0306925_10048107	All Organisms → cellular organisms → Bacteria	4439	Open in IMG/M
3300031890\|Ga0306925_10460347	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1358	Open in IMG/M
3300031910\|Ga0306923_10340833	All Organisms → cellular organisms → Bacteria	1710	Open in IMG/M
3300031910\|Ga0306923_12517734	Not Available	507	Open in IMG/M
3300031942\|Ga0310916_10766576	Not Available	814	Open in IMG/M
3300031942\|Ga0310916_11167043	Not Available	638	Open in IMG/M
3300031946\|Ga0310910_11018015	Not Available	647	Open in IMG/M
3300031947\|Ga0310909_10174684	Not Available	1776	Open in IMG/M
3300031954\|Ga0306926_10031570	All Organisms → cellular organisms → Bacteria	6216	Open in IMG/M
3300031954\|Ga0306926_10500273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1494	Open in IMG/M
3300031954\|Ga0306926_11855648	Not Available	682	Open in IMG/M
3300031962\|Ga0307479_10081386	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3134	Open in IMG/M
3300031962\|Ga0307479_10407208	Not Available	1345	Open in IMG/M
3300032076\|Ga0306924_10078782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3690	Open in IMG/M
3300032076\|Ga0306924_10664241	Not Available	1174	Open in IMG/M
3300032076\|Ga0306924_11630680	Not Available	679	Open in IMG/M
3300032180\|Ga0307471_103718414	Not Available	540	Open in IMG/M
3300032261\|Ga0306920_101777473	Not Available	871	Open in IMG/M
3300033289\|Ga0310914_10178279	Not Available	1890	Open in IMG/M
3300033289\|Ga0310914_10777663	Not Available	855	Open in IMG/M
3300033289\|Ga0310914_11191781	Not Available	663	Open in IMG/M
3300033289\|Ga0310914_11208923	Not Available	658	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.01%
Aquatic	Environmental → Aquatic	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.01%
Freshwater	Environmental → Aquatic → Freshwater	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.20%
Loam	Environmental → Terrestrial → Soil → Loam	18.81%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	62.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.97%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.99%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Bulk Soil	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027182	Bulk soil microbial communities from Harvard Forest, USA - 3Bulk_unsorted metaG (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300031015	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1056392801	3300000364	Soil	MSDSAYFEYALVLPEERYLIEVQTRNPETGETRGNEELERVAKEALITVIGQGRDDLEKKVRPNPISEPDAQNLKKVQQLSSGSGCAVFLVE*
INPhiseqgaiiFebDRAFT_1056397932	3300000364	Soil	MSDSAYFEYALVLPEERYLIEVPTRHPATGETRTNEELERVATEALINAIGQGRDDLMKKLKPNPISESDALSLKKVQQLSSGPGWTVYLVE*
JGI1027J12803_1016240191	3300000955	Soil	MSDSAYFEYALVLPEERYLIEVQTRNPETGETRGNEELERVAKEALITVIGQGRDDLEKKVRPNPISEPDAQNLKKVQQL
JGI12053J15887_102852091	3300001661	Forest Soil	MSDLAYFEYALVLPEERYLIEVQTRDATGETRGNDELERLAKDALVKVVGKAGDDLKEKLKPNPISESNAQGLKKVQTLLSDPGCTVFLVE*
JGIcombinedJ26739_1001822473	3300002245	Forest Soil	MSDLAYFEYALVLPEERYLVEVQARNPATAEVRGHDELESIAKEVLVAVIGQGRPDFVKELKPTAIGEVDAQRLTKVQQLLTRPDCTVFLVE*
Ga0058899_119535171	3300004631	Forest Soil	MLAGAPATNEDGPSACGEIPFSMSDLAYFDYALVLPEERYLIEVQVGNPATGVTRRNDELENLAKDALITVVGQGRDDLAEKLKPTPINESDAKNLTKVQQLLSGPDCAVYLVE*
Ga0066388_1022308091	3300005332	Tropical Forest Soil	MSDLAYFEYALVLPEERYLIEVQTRDPATGKAREQEELERVAKEALITVVGKGGDDLENKLKPNPIGESAAQGLTKVQQLLPGPDCAVYLVE*
Ga0066388_1045414642	3300005332	Tropical Forest Soil	LAYFDYALVLPEERYLIEVQTGNPATGATRGNDELEKVAKDALITVVGQGSSDLAEKLKPNPISESDARNLTKVQQLLSRPDCAVYLVE*
Ga0066388_1076739441	3300005332	Tropical Forest Soil	MSDLAYFEYALVLPEERYLIEVQTLNPATGKAREQNELESIAKAALIKVIGQGGDDLQKKLNPNPISEAEAQGLTKVQQLLPGPDCAVYLVE*
Ga0070708_1000347952	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSDLAYFDYALVLPEERYLIEVQAGNPATGVTRRNDELEKLAKDALITVVGQGPADLAEKLKPTPISESDAKNLTKVQQLLSGPDCAVYLVE*
Ga0070706_1004686452	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLAGAPATNEDGPSACGEIPFGMSDLAYFDYALVLPEERYLIEVQAGNPATGVTRRNDELEKLAKDALITVVGQGPADLAEKLKPTPISESDAKNLTKVQQLLSGPDCAVYLVE*
Ga0070706_1005216252	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSDLAYFEYALVLPEERYLIEVQTRNPATGETRGNDELERLAKDALVKVVGKAGDDLKEKLKPNPISESNAQGLKKVQELLSEPGCNVFLVE*
Ga0066903_1015103152	3300005764	Tropical Forest Soil	MSDLAYFDYALVLPEERYLIEVQTLNPATGKAREQNELESIAKAALIKVIGQGGDDLEKKLNPNPISEAEAQGLTKVQELLPGPDCAVYLVE*
Ga0066903_1017799132	3300005764	Tropical Forest Soil	MPARISAADEGGPSGCGKIAFGMSNLAYFDYALVLPEERYLIEVQAGNPATGVTRGNDELERLAKEALITVVGQGNSDLAEKLKPNPISESDARNLTKVQQLLSGPDCTVYLVE*
Ga0126373_132891821	3300010048	Tropical Forest Soil	RPKIGFVMSDLAYFEYALVLPEERYLIEVQIHNSATGKAHEQDELQRVAKEALITVVGQKGNDLEKKLNPNPISEAEAQGLAKVQQLLARPDCVVYLVE*
Ga0127503_109584701	3300010154	Soil	EYALVLPEERYLIEVQTRNPETGETRGNEELERIAKEALITVIGQGRDDLEKKLRPNPISESDAQHLKKVQQLSSGSGCAVFLVE*
Ga0126372_110405601	3300010360	Tropical Forest Soil	MSDLAYFEYALVLPEERYLIEVQTLNPATGKAHEQNELESIAKAALIKVIGQGGDDLEKKLNPNPISEAEAQGLTKVQELLPGPDCAVY
Ga0126381_1006773584	3300010376	Tropical Forest Soil	MSNLAYFDYALVLPEERYLIEVQAGNPATGVTRGNDELERLAKEALITVVGQGNSDLAEKLKPNPISESDARNLTKVQQLLS
Ga0126381_1021286561	3300010376	Tropical Forest Soil	MSDLAYFDYALVLPEERYLIEVQTGNPATGATRGNDELEKVAKDALITVVGQGSSDLAEKLKPNPISESDARNLTKVQQLLSRPDCAVYLVE*
Ga0150983_152454592	3300011120	Forest Soil	ATNEDGPSACGEIPFGMSDLAYFDYALVLPEERYLIEVQAGNPATGVTRRNDELEKLAKDALITVVGQGPADLAEKLKPTPISESDAKNLTKVQQLLSGPDCAVYLVE*
Ga0150983_163672521	3300011120	Forest Soil	MLAGAPATNEDGPSACGEIPFSMSDLAYFDYALVLPEERYLIEVQVGNPATGVTRRNDELENLAKDALITVVGQGRDDLAEKLKPTPINESDAKNLTKVQQHLSGPDCAVYLVE*
Ga0137363_111440352	3300012202	Vadose Zone Soil	LAYFDYALVLPEERYLIEVQAGNPATGIKRRNDELEKLAKDALITVVGQGPDDLAEKLKPNPISESDAKNLTKVQQLLSGPDCAVYLVE*
Ga0137362_106853081	3300012205	Vadose Zone Soil	MLAGAPATNEDGPSACGEIPFGMSDLAYFDYALVLPEERYLIEVQAGNPATGIKRRNDELEKLAKDVLITVVGQGPDDLAEKLKPNPISESDAKNLTK
Ga0137361_105284903	3300012362	Vadose Zone Soil	DQRSNGPRSETLGMLAGAPATNEDGPSACGEIPFGMSDLAYFDYALVLPEERYLIEVQAGNPATGVTRRNDELEKLAKDALITVVGQGPDDLAEKLKPTPISESDAKNLTKVQQLLSGPDCAVYLVE*
Ga0137361_109886032	3300012362	Vadose Zone Soil	MSDLAYFEYALVLPEERYLIEVQTRDATGETRGNDELERLAKDALVKVVGKAGDDLKEKLKPNPISKSNVQGLKKVQTLLSDPG
Ga0137358_108306811	3300012582	Vadose Zone Soil	MSDLAYFDYALVLPEERYLIEVQAGNPATGVTRRNDELEKLAKDALITVVGQGPADLAEKLKPTPISESDAKNLTKVQQL
Ga0137359_100473652	3300012923	Vadose Zone Soil	MLAGAPATNEDGPSACGEIPFGMSDLAYFDYALVLPEERYLIEVQAGNPATGVTRRNDELEKLAKDALITVVGQGPADLAEKLKPTPISESDAKNLTKGQQLLSGPDCSVYLVE*
Ga0126375_115442671	3300012948	Tropical Forest Soil	MSDLAYFEYALVLPEERYLIEVQTRDPATGKAREQNELESVAKEALIKVIGRGGDDLQKKLNPNPISEAEAQGLTKVQQLLPGPDCAVYLVE*
Ga0126369_105949261	3300012971	Tropical Forest Soil	MSDLAYFDYALVLPEERYLIEVQTLNPATGKAREQNELESIAKAALIKVIGQGGDDLEKKLNPNPISEAEAQGLTKVQQLLPGPDCAVYLVE*
Ga0126369_108389411	3300012971	Tropical Forest Soil	MSDLAYFDYALVLPEERYLIEVQTGNPATGATRGNDELEKVAKDALITVVGQGSSDLAEKLKPNPISESDARNLTKVQQLLSGPDCTVYLVE*
Ga0182036_101741112	3300016270	Soil	VIAGRRLETGVTGNKDGPPACPRIGFVMSDLAYFEYALVLPEERYLIEVQTHNSAAGKAHEQDELQRVAKEALIAVVGQKGNDLEKKLNPNPISEAEAQGLAKVQQLLARPDCVVYLVE
Ga0182041_100044826	3300016294	Soil	MSDLAYFDYALVLPEEHYLIEVTAGDNATGVTRGHEELEKLATDALITVISQGRGDLAEKLKPTPISESEARNLKKVQQLLSKPDCAVYLVE
Ga0182041_100741885	3300016294	Soil	IEVQTHNSAAGKAHEQDELQRVAKEALIAVVGQKGNDLEKKLNPNPISEAEAQGLAKVQQLLARPDCVVYLVE
Ga0182041_121386711	3300016294	Soil	MSDLAYFEYALVLPEERYLIEVQTRNPATGKAREKNELESVAKEALITVVGKRGDDLEKKLNPNPISEAEAQGLTKVQQLL
Ga0182033_101428732	3300016319	Soil	MSDLAYFDYALVLPEERYLIEVQTLNPATGKAREQNELESIAKAALIKVIGQGGDDLQKKLNPNPISEAEAQGLTKVQELLPGPDCAVYLVE
Ga0182033_102674301	3300016319	Soil	DTRRLETGVTGNKDGPPASPKIGFVMSDLAYFEYALVLPEERYLIEVQTHNSATGKAHEQDELQRVAKEALIAVVGQKGNDLEKKLNPNPISEAEAQGLAKVQQLLARPDCVVYLVE
Ga0182033_108301182	3300016319	Soil	YFEYALVLPEERYLIEVQTRNPATGKAREQDELEKIAKEALITVVGQKGDDLEKKLNPNPISEDEAQGLTKVQQLLPGPDCAVYLVE
Ga0182032_103633743	3300016357	Soil	IGFVMSDLAYFEYALVLPEERYLIEVQTRNPATGKVREQDELEKIAKEALITVVGQKGDDLEKKLNPNPISEDEAQGLTKVQQLLPGPDCAVYLVE
Ga0182032_108094532	3300016357	Soil	MSDLAYFEYALVLPEERYLIEVQTHNSAAGKAHEQDELQRVAKEALIAVVGQKGNDLEKKLNPNPISEAEAQGLAKVQQLLARPDCVVYLVE
Ga0182034_102052551	3300016371	Soil	MSDLAYFDYALVLPEERYLIEVQTRNPATGKAREQNELESIAKAALIKVIGQGGDDLEKKLNPNPISEAEAQGLTKVQELLPGPDCAVYLVE
Ga0182034_105669602	3300016371	Soil	MSDLAYFEYALVLPEERYLIEVQTHNSAAGKAHEQDELQRVAKEALITVVGQKGNDLEKKLNPNPISEAEAQGLAKVQQLLARPDCVVYLVE
Ga0182040_108882451	3300016387	Soil	MSDLAYFEYALVLPEERYLIEVQTRNPATGKAREQDELEKIAKEALITVVGQKGDDLEKKLNPNPISEDEAQGLAKVQQLLARPDCVVYLVE
Ga0182037_102430711	3300016404	Soil	RYLIEVQTRNPATGKVREQDELEKIAKEALITVVGQKGDDLEKKLNPNPISEDEAQGLTKVQQLLPGPDCAVYLVE
Ga0182037_102452281	3300016404	Soil	MSDLAYFEYALVLPEERYLIEVQTLNPATGKAREQNELESIAKAALIKVIGQGGDDLQKKLNPNPISEAEAQGLTKVQELLPGPDCAVYLVE
Ga0182038_100790164	3300016445	Soil	YALVLPEEHYLIEVAASDNATGVTRGHEELEKLATDALITVVSQGRGDLAEKLKPTPISESEARNLKKVQQLLSKPDCAVYLVE
Ga0182038_107090521	3300016445	Soil	KIGFVMSDLAYFEYALVLPEERYLIEVQIHNSATGKAHEQDELQRVAKEALIAVVGQKGNDLEKKLNPNPISEAEAQGLAKVQQLLARPDCVVYLVE
Ga0182038_111175521	3300016445	Soil	MSDLAYFEYALVLPEERYLIEVQTRNPATGKAREMNELESVAKEALITVVGKRGDDLEKKLNPNPISEAEAQGLTKVQQLLPGPDCAVYLVE
Ga0210404_101296871	3300021088	Soil	MLAGAPATNEDGPSACGEIPFGMSDLAYFDYALVLPEERYLIEVQAGNPATGVTRRNDELEKLAKDALITVVGQGPTDLAEKLKPTPISESDAKNLTKVQQLLS
Ga0210405_100465421	3300021171	Soil	MSDLAYFEYALVLPEERYLIEVQTRNPATGETRGNDELERLAKDALMKVVGKAGDDLKEKLKPNPISESNAQGLKKVQELLSEAGCNVFLVE
Ga0210405_102724042	3300021171	Soil	MLAGAPATNEDGPSACGEIPFGMSDLAYFDYALVLPEERYLIEVQAGNPATGVTRRNDELEKLAKDALITVVGQGPDDLAEKLKPTPISESDAKNLTKVQQLLSGPDCAVYLVE
Ga0210408_101956252	3300021178	Soil	MLAGAPATNEDGPSACGEIPFGMSDLAYFDYALVLPEERYLIEVQAGNPATGVTRRNDELEKLAKDALITVVGQGPADLAEKLKPTPISESDAKNLTKVQQLLSGPDCAVYLVE
Ga0126371_100974926	3300021560	Tropical Forest Soil	ARGKIAFGMSDLAYFDYALVLPEERYLIEVQTGNPATGATRGNDELEKVAKDALITVVGQGSSDLAEKLKPNPISESDARNLTKVQQLLSRPDCAVYLVE
Ga0126371_102024531	3300021560	Tropical Forest Soil	MSDLAYFEYALVLPEERYLIEVQTLNPATGKAREQNELESIAKAALIKVIGQGGDDLEKKLNPNPISEAEAQGLTKVQELLPGPDCAV
Ga0242660_12273232	3300022531	Soil	ATGVTRRNDELEKLAKDALITVVGQGPADLAEKLKPTPISESDAKNLTKVQQLLSGPDCAVYLVE
Ga0242662_102199991	3300022533	Soil	MLAGAPATNEDGPSACGEIPFGMSDLAYFDYALVLPEERYLIEVQAGNPATGVTRRNEELEKLAKDALITVVGQGPADLAEKLKPTPISESDAKN
Ga0242665_100833592	3300022724	Soil	MLGMLAGAPATNEDGPSACGEIPFGMSDLAYFDYALVLPEERYLIEVQAGNPATGVTRRNDELEKLAKDALITVVGQGPAELAEKLKPTPISESDAKNLTKVQQLLSGPDCAVYLVE
Ga0207684_101375373	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSDLAYFDYALVLPEERYLIEVQVGNPGTGVTRRNDELEKLAKDALITVVGQGRDDLAEKLKPTPISESDAKNLTKVQQLLSGPDCAVYLVE
Ga0207646_101271785	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSDLAYFDYALVLPEERYLIEVQAGNPATGVTRRNDELEKLAKDALITVVGQGPADLAEKLKPTPISESDAKNLTKVQQLLSGPDCAVYLVE
Ga0208952_10091741	3300027182	Bulk Soil	MLAGAPATNEDGPSACGEIPFSMSDLAYFDYALVLPEERYLIEVQVGNPATGVTRRNDELENLAKDALITVVGQGRDDLAEKLKPTPINESDAKNLTKVQQLLSGPDCAVYLVE
Ga0209418_10245051	3300027371	Forest Soil	MSDLAYFEYALVLPEERYLIEVQTRNPATGKAREQDELERIAKEALITVVGQKGDNLEKKLNPNPISEDEAQGLTKVQQLLPGPDCAVYLVE
Ga0209217_10913252	3300027651	Forest Soil	MSDLAYFEYALVLPEERYLVEVQARNPATAEVRGHDELESIAKEVLVAVIGQGRPDFVKELKPTAIGEVDAQRLTKVQQLLTRPDCTVFLVE
Ga0209328_102438321	3300027727	Forest Soil	LAYFEYALVLPEERYLVEVQARNPATAEVRGHDELESIAKEVLVAVIGQGRPDFVKELKPTAIGEVDAQRLTKVQQLLTRPDCTVFLVE
Ga0208989_100063765	3300027738	Forest Soil	MSDLAYFEYALVLPEERYLIEVQTRDATGETRGNDELERLAKDALVKVVGKAGDDLKEKLKPNPISESNAQGLKKVQTLLSDPGCTVFLVE
Ga0138298_11421251	3300031015	Soil	AGNPATGVTRRNDELEKLAKDALITVVGQGPADLAEKLKPTPISESDAKNLTKVQQLLSGPDCAVYLVE
Ga0170834_1123818501	3300031057	Forest Soil	MSDLAYFEYALVLPEERYLIEVQTRNPATKEVRGHDELESLAKEVLVTVIGQGRGDLVKELKPNAISEADAQRLTKVQQLLTRPDCNVFLVE
Ga0318534_106016011	3300031544	Soil	MSDLAYFEYALVLPEERYLIEVQTLNPATGKAREQNELESVAKEALITVIGQGGDDLQKKLNPNPISEAEAQGLTKVQQLLPGPDCAVYLVE
Ga0310915_103248043	3300031573	Soil	PKIGFVMSDLAYFEYALVLPEERYLIEVQTRNPATGKVREQDELEKIAKEALITVVGQKGDDLEKKLNPNPISEDEAQGLTKVQQLLPGPDCAVYLVE
Ga0307476_106628581	3300031715	Hardwood Forest Soil	MSDLAYFEYALVLPEERYLIEVQTRNPATGKAREQDELERIAKEALITVVGQKGDDLEKKLNPNPISEDEAQDLTKVQQLLPGPDCAVYLVE
Ga0306917_100138462	3300031719	Soil	MSDLAYFEYALVLPEERYLIEVQTRNPATGKAREQDELEKIAKEALITVVGQKGDDLEKKLNPNPISEDEAQGLTKVQQLLPGPDCAVYLVE
Ga0306917_109043732	3300031719	Soil	MSDLAYFDYALVLPEEHYLIEVTAGDNATGVTRGHEELEKLATDALITVVSQGRGDLAEKLKPTPISESEARNLKKVQQLLSKPDCAVYLVE
Ga0306918_104713861	3300031744	Soil	IEVQTLNPATGKAREQNELESIAKAALIKVIGQGGDDLQKKLNPNPISEAEAQGLTKVQQLLPGPDCAVYLVE
Ga0306918_107523702	3300031744	Soil	MSDLAYFEYALVLPEERYLIEVQTRNPATGKVREQDELEKIAKEALITVVGQKGDDLEKKLNPNPISEDEAQGLTKVQQLLPGPDCAVYLVE
Ga0307477_105638121	3300031753	Hardwood Forest Soil	MLAGAPATNEDGPSACGEIPFGMSDLAYFDYALVLPEERYLIEVQAGNPATGVTRRNDELEKLAKDALITVVGQGPADLAEKLKPTPISESDAKNLTKAQQLLSGPDCAVYLVE
Ga0318546_108947782	3300031771	Soil	PRIGFVMSDLAYFEYALVLPEERYLIEVQTHNSATGKAHEQDELQRVAKEALIAVVGQKGNDLEKKLNPNPISEAEAQGLAKVQQLLARPDCVVYLVE
Ga0318565_101907223	3300031799	Soil	VIAGRRLETGVTGNKDGPPACPRIGFVMSDLAYFEYALVLPEERYLIEVQTHNSATGKAHEQDELQRVAKEALIAVVGQKGNDLEKKLNPNPISEAEAQGLAKVQQLLARPDCVVYLVE
Ga0310917_100315914	3300031833	Soil	MSDLAYFEYALVLPEERYLIEVQALNPATGKAREQNELESIAKAALIKVIGQGGDDLQKKLNPNPISEAEAQGLTKVQQLLPGPDCAVYLVE
Ga0310917_100377641	3300031833	Soil	MSDLAYFDYALVLPEEHYLIEVTAGDNATGVTRGHEELEKLATDALITVISQGRGDLAEKLKPTPISESDARNLKKVQQLLSKPDCAVYLVE
Ga0306919_101410214	3300031879	Soil	MSDLAYFEYALVLPEERYLIEVQTHNSATGKAHEQDELQRVAKEALIAVVGQKGNDLEKKLNPNPISEAEAQGLAKVQQLLARPDCVVYLVE
Ga0306919_107687011	3300031879	Soil	PEERYLIEVQTLNPATGKAREQNELESIAKAALIKVIGQGGDDLQKKLNPNPISEAEAQGLTKVQQLLPGPDCAVYLVE
Ga0306925_100481074	3300031890	Soil	MSDLAYFEYALVLPEERYLIEVQTLNPATGKAREQNELESIAKAALIKVIGQGGDDLQKKLNPNPISEAEAQGLTKVQQLLPGPDCAVYLVE
Ga0306925_104603471	3300031890	Soil	MSDLAYFEYALVLPEERYLIEVQTRNPATGKAREKNELEKVAKEALITVVGKRGDDLEKKLNPNPISEAEAQGLTKVQQLLPGPDYAVYLVE
Ga0306923_103408332	3300031910	Soil	MSDLAYFEYALVLPEERYLIEVQTRNPATGKAREKNELEKVAKEALITVVGKRGDDLEKELNPNPISEAEAQGLTKVQQLLPGPDYAVYLVE
Ga0306923_125177342	3300031910	Soil	MSDLAYFEYALVLPEERYLIEVQTRNPATGKARDQIELEGVAKEALIKVIGRGGDDLEKKLKPNPMSESEARALTKVQQL
Ga0310916_107665761	3300031942	Soil	FGMSDLAYFEYALVLPEERYLIEVQTRNPATGKAREKNELEKVAKEALITVVGKRGDDLEKKLNPNPISEAEAQGLTKVQQLLPGPDYAVYLVE
Ga0310916_111670431	3300031942	Soil	IGFVMSDLAYFEYALVLPEERYLIEVQTHNSATGKAHEQDELQRVAKEALIAVVGQKGNDLEKKLNPNPISEAEAQGLAKVQQLLARPDCVVYLVE
Ga0310910_110180151	3300031946	Soil	MSDLAYFEYALVLPEERYLIEVQTRNPATGKVREQDELEKIAKEALIRVVGQKGDDLEKKLNPNPISEDEAQGLTKVQQLLPGPDCAVYLVE
Ga0310909_101746844	3300031947	Soil	PKIGSVMSDLAYFEYALVLPEERYLIEVQTRNPATGKAREQDELEKIAKEALITVVGQKGDDLEKKLNPNPISEDEAQGLTKVQQLLPGPDCAVYLVE
Ga0306926_100315704	3300031954	Soil	MSDLAYFDYALVLPEERYLIEVQTLNPATGKAREQNELESIAKAALIKVIGQGGDDLQKKLNPNPISEAEAQGLTKVQQLLPGPDCAVYLVE
Ga0306926_105002733	3300031954	Soil	MSDLAYFEYALVLPEERYLIEVQTRNPATGKARDQIELEGVAKEALIKVIGRGGDDLEKKLKPNPMSESEARALTKVQQLLPGPDCAVYLVE
Ga0306926_118556481	3300031954	Soil	LPEEHYLIEVTARDNATGVTRGHEELEKLATDALITVISQGRGDLAEKLKPTPISESDARNLKKVQQLLSKPDCAVYLVE
Ga0307479_100813864	3300031962	Hardwood Forest Soil	MSDLAYFDYALVLPEEHYLIEVQAGNPATGVTRRNDELEKLAKDALITVVGQGPADLAEKLKPTPISESDAKNLTKVQQLLSGPDCA
Ga0307479_104072085	3300031962	Hardwood Forest Soil	SACGEIPFGMSDLAYFDYALVLPEERYLIEVQAGNPATGVTRRNDELEKLAKDALITVVGQGPTDLAEKLKPTPISESDAKNLTKVQQLLSGPDCAVYLVE
Ga0306924_100787821	3300032076	Soil	FEYALVLPEERYLIEVQTHNSATGKAHEQDELQRVAKEALIAVVGQKGNDLEKKLNPNPISEAEAQGLAKVQQLLARPDCVVYLVE
Ga0306924_106642413	3300032076	Soil	ATGKVREQDELEKIAKEALITVVGQKGDDLEKKLNPNPISEDEAQGLTKVQQLLPGPDCAVYLVE
Ga0306924_116306801	3300032076	Soil	VMSDLAYFEYALVLPEERYLIEVQTRNPATGKAREKNELESVAKEALITVVGKRGDDLEKKLNPNPISEAEAQSLTRVQQLLPGPDCAVYLVE
Ga0307471_1037184141	3300032180	Hardwood Forest Soil	MSDLAYFEYALVLPEERYLIEVPTRDPATGKAREKDELEKVAKEALLAVIGQVDGDLEKKLNPNPISESEAQGLTKVQQLLPGPDCAVYLVE
Ga0306920_1017774732	3300032261	Soil	MSDLAYFEYALVLPEERYLIEVQTRNPATGKARDQIELEGVAKEALIKVIGRGGDDLEKKLKPNPMSESEAQALTKVQQLLPGPDCAVYLVE
Ga0310914_101782791	3300033289	Soil	GLPARPKIGFVMSDLAYFEYALVLPEERYLIEVQTRNPATGKVREQDELEKIAKEALITVVGQKGDDLEKKLNPNPISEDEAQGLTKVQQLLPGPDCAVYLVE
Ga0310914_107776631	3300033289	Soil	VIAGRRLETGVTGNKDGPPASPKIGFVMSDLAYFEYALVLPEERYLIEVQTHNSATGKAHEQDELQRVAKEALIAVVGQKGNDLEKKLNPNPISEAEAQGLAKVQQLLARPDCVVYLVE
Ga0310914_111917811	3300033289	Soil	DYALVLPEEHYLIEVTAGDNATGVTRGHEELEKLATDALITVVSQGRGDLAEKLKPTPISESEARNLKKVQQLLSKPDCAVYLVE
Ga0310914_112089231	3300033289	Soil	MSDLAYFDYALVLPEERYLIEVQTGNPATGATRGNDELEKLAKDALVTVVGEGGSNLAEKLKPNPISESDARNLTKVQQLVSRPDCAVYLVE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103998

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences