Metagenome Family F104009

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F104009
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	39 residues
Representative Sequence	MYDIPFDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQP
Number of Associated Samples	10
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	4.95 %
% of genes from short scaffolds (< 2000 bps)	3.96 %
Associated GOLD sequencing projects	6
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (99.010 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut (100.000 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal proximal gut (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.59% β-sheet: 0.00% Coil/Unstructured: 56.41%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00076	RRM_1	1.98
PF01248	Ribosomal_L7Ae	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1358	Ribosomal protein L7Ae or related RNA K-turn-binding protein	Translation, ribosomal structure and biogenesis [J]	0.99
COG1911	Ribosomal protein L30E	Translation, ribosomal structure and biogenesis [J]	0.99

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
All Organisms	root	All Organisms	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
cellular organisms	root	All Organisms → cellular organisms	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Hexapoda	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Insecta	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Dicondylia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Pterygota	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002127\|JGI20164J26629_10456960	Not Available	565	Open in IMG/M
3300002175\|JGI20166J26741_12171007	Not Available	641	Open in IMG/M
3300002185\|JGI20163J26743_10354971	Not Available	508	Open in IMG/M
3300027891\|Ga0209628_10090627	Not Available	3099	Open in IMG/M
3300027891\|Ga0209628_10330279	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	1600	Open in IMG/M
3300027984\|Ga0209629_10115058	Not Available	2717	Open in IMG/M
3300027984\|Ga0209629_10167704	Not Available	2221	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Arthropoda	Host-Associated → Arthropoda	100.00%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Arthropoda → Digestive System	100.00%

Habitat	Taxonomy	Distribution
Gut	Host-Associated → Arthropoda → Digestive System → Gut	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	100.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001544	Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1	Host-Associated	Open in IMG/M
3300002125	Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4	Host-Associated	Open in IMG/M
3300002127	Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3	Host-Associated	Open in IMG/M
3300002175	Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5	Host-Associated	Open in IMG/M
3300002185	Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1	Host-Associated	Open in IMG/M
3300027558	Cubitermes ugandensis crop segment gut microbial communities from Kakamega Forest, Kenya - Cu122C (SPAdes)	Host-Associated	Open in IMG/M
3300027891	Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4 (SPAdes)	Host-Associated	Open in IMG/M
3300027904	Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3 (SPAdes)	Host-Associated	Open in IMG/M
3300027960	Cubitermes ugandensis midgut segment microbial communities from Kakamega Forest, Kenya - Cu122M (SPAdes)	Host-Associated	Open in IMG/M
3300027984	Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20163J15578_102707791	3300001544	Termite Gut	PFDRSFLQLSNGIRHVMPSTDRRLELKKKTSMAQTA*
JGI20163J15578_102811482	3300001544	Termite Gut	MYDIPFDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQPVSQPAVC*
JGI20163J15578_103699691	3300001544	Termite Gut	MYXIXFDRSFLQLSNGIRHVMPSTDRKLELTAKSSM
JGI20163J15578_104929701	3300001544	Termite Gut	MYDIPFDRSFLQLSNGIRHFMPSTDRKLELTAKASMA
JGI20163J15578_104963161	3300001544	Termite Gut	MFHIPFDGSFLQLSNGIRHVMPSTDRKLELKAKASMAQP
JGI20163J15578_105402551	3300001544	Termite Gut	MYDIPFDITFLQLSNGIRHVMPSTDRKLELTAKASMAQPV
JGI20163J15578_107323651	3300001544	Termite Gut	MYDIPFDRSFLHLSNGIRHVMPSTDRKLELTAKASMAQPVSQP
JGI20163J15578_107371931	3300001544	Termite Gut	MYDIPFHISFLQLSNGIRHVMPSTDRKLELTAKASMAQ
JGI20163J15578_107949421	3300001544	Termite Gut	RSFLQLSNGIRHVMPSTDRKLELTAKALMAQPISQPAV*
JGI20165J26630_102725062	3300002125	Termite Gut	MYDTPFDRPFLQLSNGIRHVMPSTDRKXELTAKXSM
JGI20165J26630_103287773	3300002125	Termite Gut	YDTPFDRSFLQLSNGIRHVMPSTDRRLELEEKTSMAQNA*
JGI20165J26630_103922081	3300002125	Termite Gut	MYDIPFNRTFLQLSNGIRHVMPSTDRKLELTAKASMAQPV
JGI20164J26629_104569601	3300002127	Termite Gut	MYDIPFDTSFLQLSNGISHVMPSTDRKLELTAKASMAQPVSQPAV
JGI20164J26629_105713771	3300002127	Termite Gut	MYDIPFNRSFLQLSNCIRHVMPSTDRKLELTAKSSMAQPVSQP
JGI20166J26741_100922521	3300002175	Termite Gut	VYYIPFDRSFLQLSNGIRHVTSSTDRKLELTVKASMAQP
JGI20166J26741_101008753	3300002175	Termite Gut	MYYIPFDRSFLQLSNSIRHVMPSTDRKLELTAKAS
JGI20166J26741_112365161	3300002175	Termite Gut	MYYIPFDRSFLQLSNGIRHVMPSTDRKLELTAKAS
JGI20166J26741_115556211	3300002175	Termite Gut	MYDKPFDRSFLQLSNGIRHVMPSTDRKLELTAKASMA
JGI20166J26741_116478142	3300002175	Termite Gut	MYDIAFDISFLQLSNGIRHVMPSTDRKLELTAKASMAQP
JGI20166J26741_117056821	3300002175	Termite Gut	MFHIPFDGSFLQLSNGIRHVMPSTDRKLELKAKASMAQPV
JGI20166J26741_118766901	3300002175	Termite Gut	MYDIPFDRTFLQLSNGIRHVMPSTDRKLELTAKASMAQPVS
JGI20166J26741_119435551	3300002175	Termite Gut	MYDTPLDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQ
JGI20166J26741_119651421	3300002175	Termite Gut	MYDIPFDRSFLQLSNGIRHVMPSTDRKLELIAKASMAQ
JGI20166J26741_119693474	3300002175	Termite Gut	MYDIPFNRSFLQLSNGIRHVMPSTDRKLELTAKASM
JGI20166J26741_119703801	3300002175	Termite Gut	MYDKPFDRSFLQLSSGIRHVMPSTDRKLELTAKASMA
JGI20166J26741_119788321	3300002175	Termite Gut	VLYIPFDRSFLQLSNDIRHVMPSTDRKLELTAKAS
JGI20166J26741_121013021	3300002175	Termite Gut	MYDIPLDRSFCQLSNGIRHVMPSTDRKLELTAKASMAQPVSQPA
JGI20166J26741_121710073	3300002175	Termite Gut	MYDIAFDRSFLQLSNGIRHVMPSTDRKLELTAKASMA
JGI20166J26741_122319051	3300002175	Termite Gut	MYDIPFDRSFLQLSDGIRHVMPSTDRKLELTAKASMAQPV*
JGI20166J26741_122389121	3300002175	Termite Gut	MYYIPFNRSFLQLSNGIRHVMPSTDRKLELTAKASMAQP
JGI20166J26741_122541811	3300002175	Termite Gut	MYDIPFDRSFLHLSNGIRHVMPSTDRKLELTAKASMAQPVSQPAV
JGI20166J26741_122675121	3300002175	Termite Gut	MYDIPSDRSFLQLLNGIRHVMPSTDRKLELTAKASMAQP
JGI20163J26743_103549711	3300002185	Termite Gut	MYDIPFDTSFLQLSNGIRHVMPSTDRKLELTAKASMAQPVS
JGI20163J26743_104217701	3300002185	Termite Gut	MYDTPLDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQP
JGI20163J26743_105986521	3300002185	Termite Gut	MYDVPFDRSFLQLSNGIRHVMPSTDRKLELTAKASMA
JGI20163J26743_106145011	3300002185	Termite Gut	MYHIPFDRSFLQLSNGVRHVMPSTDRKLELTAKASM
JGI20163J26743_107465891	3300002185	Termite Gut	MFDIPFDRSFLQLSNGIRHVMPSTDRKLELTAKAS
JGI20163J26743_108444091	3300002185	Termite Gut	MYDLPFDRSFLQLSNGIRHVMPSTDRKLELTAKASMA
JGI20163J26743_109603471	3300002185	Termite Gut	MYDIPFDRLFLQLSNGIRHVMPSTDRKLELTAKASMAQPVSQ
JGI20163J26743_111114681	3300002185	Termite Gut	MYDIPFHISFLQLSNGIRHVMPSTDRKLELTAKASMAQPVS
JGI20163J26743_111735141	3300002185	Termite Gut	MYDIPIDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQP
JGI20163J26743_112215321	3300002185	Termite Gut	MFHIPFDGSFLQLSNGIRHVMPSTDRKLELKAKASMAQPVS
JGI20163J26743_114910302	3300002185	Termite Gut	MYDIPFNRTFLQLSNGIRHVMPSTDRKLELTAKASMAQPVSQ
Ga0209531_100374791	3300027558	Termite Gut	MYDIPLDRSFLQLSNGIRHVMPSTDRKLELTAKAS
Ga0209531_100563341	3300027558	Termite Gut	MYYIPLDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQ
Ga0209531_100895741	3300027558	Termite Gut	MYDVPFDRSFLQLSNGIRHVMPSTDRKLELTAKASM
Ga0209628_100906271	3300027891	Termite Gut	MYDIPFDTSFLQLSNGIRHVMPSTDRKLELTAKASMAQPVSQPALCCN
Ga0209628_101031913	3300027891	Termite Gut	MYYIPFDRSFLQLSNGIRHVMPSTDRKLELTAKASM
Ga0209628_101038002	3300027891	Termite Gut	MYDIPFDRSFLQLSNGIRHVMPSTDRKLELTAKAS
Ga0209628_101052241	3300027891	Termite Gut	MHDIPFDRSFLQLSNGIRHVMPSTDRKLELTAKASMA
Ga0209628_103302791	3300027891	Termite Gut	MYDIPFDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQPVSQPAVC
Ga0209628_104063541	3300027891	Termite Gut	MYDMPFDRSFLQLSNGIRHVMPSTDRKLELTAKASM
Ga0209628_104571531	3300027891	Termite Gut	MYDIPFDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQPVSQP
Ga0209628_106855381	3300027891	Termite Gut	MYDIPFDRSFLQLSNGIRHVMPSTDRKLELTAKASM
Ga0209628_107282421	3300027891	Termite Gut	MYDIPFDRSFLQHSNGIRHVMPSTDRKLELTAKASMAQPVSQPAV
Ga0209628_107437502	3300027891	Termite Gut	MYDTPFDRPFLQLSNGIRHVMPSTDRKPELTAKASM
Ga0209628_108206871	3300027891	Termite Gut	MYVIPFDRSFLQLSNGIRHVMPSTDRKLELTAKALMAQPVSQPA
Ga0209628_108562351	3300027891	Termite Gut	MYDIPFDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQ
Ga0209628_108767671	3300027891	Termite Gut	MYDIPFDRSFLQLSNGIRHVMPSTVRKLELTAKASMA
Ga0209628_109281792	3300027891	Termite Gut	MYDIPFDRSFLHLSNGIRHIMPSTDRKLELTAKAS
Ga0209628_109615281	3300027891	Termite Gut	MYHIPFDKTFLQLSNGIRHVMPSTDRKLELTAKASMAQPVSQPALCCN
Ga0209628_109627781	3300027891	Termite Gut	MYDTPFDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQPVSQP
Ga0209628_110284891	3300027891	Termite Gut	MYDIPFDRSFLQLSNGIRHIMPSTDRKLELTAKASMAQPVSQP
Ga0209628_110390841	3300027891	Termite Gut	MYDLPFDRSFLQLSNGIRHVMPSTDRKLELTAKASM
Ga0209628_110676071	3300027891	Termite Gut	MYDIPFDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQP
Ga0209628_110907461	3300027891	Termite Gut	MYDIPFNRSFLQLSNGIRHVMPSTDRKLELTAKASMAQPVSQ
Ga0209628_111017941	3300027891	Termite Gut	MYHIPLDRSFLQLSNDTRHVMPSTERKLELTAKHRWLSP
Ga0209628_112863571	3300027891	Termite Gut	MYHIPFDRSFLQLSNGVRHVMPSTDRKLELTAKAS
Ga0209628_113249661	3300027891	Termite Gut	MYDIPFNRSFLQLSNGIRHVMPSTDRKLELTAKAS
Ga0209737_106109652	3300027904	Termite Gut	MYDIPFDRSFLQLSNGIRHVMPSTDRKLELTAKALMAQPV
Ga0209737_106559071	3300027904	Termite Gut	MYGIPFDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQPV
Ga0209737_107253671	3300027904	Termite Gut	MYHVPFDRSFLQLSNGIRHVMPSTDRKLELTAKASM
Ga0209737_107778291	3300027904	Termite Gut	MYDIPFDRSFLQHSNGIRHVMPSTDRKLELTAKASMAQPVSQ
Ga0209737_108149542	3300027904	Termite Gut	DIPFDRSFLQLSNGIRHVMPSTDRKLELTAKALMAQPISQPAV
Ga0209737_108716041	3300027904	Termite Gut	MYDIPFDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQPVSQPAV
Ga0209737_110460101	3300027904	Termite Gut	MYDIPFNRSFLQLSNGIRHVMPSTDRKLELTAKASMAQPISQPA
Ga0209737_112242061	3300027904	Termite Gut	MYYIPFDRSFLQLSNGIRHVMPSTDRKLELTANASMAQ
Ga0209737_113177142	3300027904	Termite Gut	MYGIPFDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQP
Ga0209737_113532731	3300027904	Termite Gut	MYDIPFDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQPVSQ
Ga0209737_113560361	3300027904	Termite Gut	MYDIPLDRSFCQLSNGIRHVMPSTDRKLELTAKESM
Ga0209737_114532641	3300027904	Termite Gut	MYDIPFDRPFLQLSNGIRHVMPSTDRKLELTAKASMAQPVS
Ga0209737_118200291	3300027904	Termite Gut	MYDIPFDRSFLQLSKGIRHVMPSTDRKLELTAKASMAQP
Ga0209627_10220791	3300027960	Termite Gut	MFDIPFDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQ
Ga0209627_10265542	3300027960	Termite Gut	MYYIPLDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQP
Ga0209627_10667721	3300027960	Termite Gut	MCDIPFDRSFLQLSNGIRHVMPSTDRKLELTAKASM
Ga0209627_12547791	3300027960	Termite Gut	MYDIPFDRLFLQLSNGIRHVMPSTDRKLELTAKASMAQPVSQPA
Ga0209627_12664402	3300027960	Termite Gut	MYYIPFDRSFLQLSNGIRHVMPSTDRKLELTAKSSM
Ga0209627_12873451	3300027960	Termite Gut	MYYIPFDRSFLQLSNSIRHVMPSTDRKLELTAKASMVQP
Ga0209629_100205111	3300027984	Termite Gut	YDIPLDRSFLKLRNGIRHVMPSTDRRLELKEKTSMAQNA
Ga0209629_101150583	3300027984	Termite Gut	MYDIPFNRSFLQLSNGIRHVMPSTDRKLELTAKASMAQPVSQPALCSNGLRY
Ga0209629_101406581	3300027984	Termite Gut	MYDIPFDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQPISQ
Ga0209629_101677043	3300027984	Termite Gut	MYDIPIDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQPVSQPALCC
Ga0209629_105676871	3300027984	Termite Gut	MYDIPFDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQPVS
Ga0209629_105701851	3300027984	Termite Gut	MYDIPFDRSFLQLSNGIRHVMPSTDRELELTAKTSMA
Ga0209629_105766951	3300027984	Termite Gut	MYDIPFDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQPV
Ga0209629_106551481	3300027984	Termite Gut	MYDIPFDRSFLQLSNSIRHVMPSTDRKLELTAKASMA
Ga0209629_107013181	3300027984	Termite Gut	VLYIPFDRSFLQLSNDIRHVMPSTDRKLELTAKASMAQ
Ga0209629_108154281	3300027984	Termite Gut	MYHIPFDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQPISQP
Ga0209629_108245702	3300027984	Termite Gut	MYDIPFDRSFLQLSNGIRHVMPSTDRKLELTAKSSMAQP
Ga0209629_110282911	3300027984	Termite Gut	MYDIPFDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQPI
Ga0209629_110409742	3300027984	Termite Gut	MYDTPLDRSFLQLSNGIRHVMPSTDRKLELTAKASMAQPISQPAVC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F104009

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences