Metagenome Family F104011

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F104011
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	50 residues
Representative Sequence	MLIDGVDMNIKLTRAPESFYLLAPSDDNKVRIKILDATLFITQAELK
Number of Associated Samples	28
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	2.97 %
% of genes from short scaffolds (< 2000 bps)	2.97 %
Associated GOLD sequencing projects	23
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (96.040 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut (98.020 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal proximal gut (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 25.33% Coil/Unstructured: 74.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00665	rve	2.97
PF00385	Chromo	1.98
PF13843	DDE_Tnp_1_7	0.99
PF00083	Sugar_tr	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	2.97
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	2.97
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	2.97
COG4584	Transposase	Mobilome: prophages, transposons [X]	2.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
All Organisms	root	All Organisms	3.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
cellular organisms	root	All Organisms → cellular organisms	3.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	3.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	3.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Hexapoda	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Insecta	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Dicondylia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Pterygota	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Polyneoptera	cohort	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Dictyoptera	superorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Blattodea	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Blattoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Termitoidae	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Kalotermitidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Kalotermitidae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Cryptotermitinae	subfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Kalotermitidae → Cryptotermitinae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Cryptotermes	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Kalotermitidae → Cryptotermitinae → Cryptotermes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Cryptotermes secundus	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Kalotermitidae → Cryptotermitinae → Cryptotermes → Cryptotermes secundus	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002238\|JGI20169J29049_11191238	Not Available	1124	Open in IMG/M
3300002238\|JGI20169J29049_11446591	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	6243	Open in IMG/M
3300002552\|JGI24694J35173_10320809	Not Available	830	Open in IMG/M
3300002834\|JGI24696J40584_12665370	Not Available	706	Open in IMG/M
3300009784\|Ga0123357_10004507	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Kalotermitidae → Cryptotermitinae → Cryptotermes → Cryptotermes secundus	16373	Open in IMG/M
3300010162\|Ga0131853_10008087	All Organisms → cellular organisms → Eukaryota → Opisthokonta	19132	Open in IMG/M
3300027864\|Ga0209755_10028356	All Organisms → cellular organisms → Eukaryota → Opisthokonta	5699	Open in IMG/M
3300028325\|Ga0268261_10002986	Not Available	12297	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Arthropoda	Host-Associated → Arthropoda	98.02%
Insecta	Host-Associated → Insecta	1.98%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Arthropoda → Digestive System	98.02%
Digestive System	Host-Associated → Insecta → Digestive System	1.98%

Habitat	Taxonomy	Distribution
Gut	Host-Associated → Arthropoda → Digestive System → Gut	98.02%
Unclassified	Host-Associated → Insecta → Digestive System → Unclassified	1.98%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	98.02%
Unclassified	Host-Associated → Insecta → Digestive System → Unclassified → Unclassified	1.98%

Habitat	Taxonomy	Distribution
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	98.02%
Termite Gut	Host-Associated → Insecta → Digestive System → Unclassified → Unclassified → Termite Gut	1.98%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001343	Nasutitermes corniger P5 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P5	Host-Associated	Open in IMG/M
3300001542	Nasutitermes corniger crop gut microbial community from laboratory colony in Florida, USA - Nc150C	Host-Associated	Open in IMG/M
3300002185	Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1	Host-Associated	Open in IMG/M
3300002238	Nasutitermes corniger P1 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P1	Host-Associated	Open in IMG/M
3300002308	Nasutitermes corniger P4 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P4	Host-Associated	Open in IMG/M
3300002450	Cornitermes sp. P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Co191 P3	Host-Associated	Open in IMG/M
3300002501	Neocapritermes taracua P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Nt197 P1	Host-Associated	Open in IMG/M
3300002504	Neocapritermes taracua P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Nt197 P4	Host-Associated	Open in IMG/M
3300002507	Microcerotermes parvus P1 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Mp193P1	Host-Associated	Open in IMG/M
3300002509	Microcerotermes parvus P4 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Mp193P4	Host-Associated	Open in IMG/M
3300002552	Cornitermes sp. P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Co191P1	Host-Associated	Open in IMG/M
3300002834	Cornitermes sp. P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Co191P4	Host-Associated	Open in IMG/M
3300005200	Nasutitermes gut metagenome	Host-Associated	Open in IMG/M
3300005201	Microcerotermes gut microbial communities from Indooroopilly, Australia - IN01 metagenome	Host-Associated	Open in IMG/M
3300006045	Neocapritermes taracua P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Nt197 P3	Host-Associated	Open in IMG/M
3300009784	Embiratermes neotenicus P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P4	Host-Associated	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010167	Labiotermes labralis P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P3	Host-Associated	Open in IMG/M
3300010369	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 3)	Host-Associated	Open in IMG/M
3300010882	Labiotermes labralis P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P4	Host-Associated	Open in IMG/M
3300027539	Nasutitermes corniger midgut segment microbial community from laboratory colony in Florida, USA - Nc150M (SPAdes)	Host-Associated	Open in IMG/M
3300027670	Nasutitermes corniger crop gut microbial community from laboratory colony in Florida, USA - Nc150C (SPAdes)	Host-Associated	Open in IMG/M
3300027864	Cornitermes sp. P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Co191P1 (SPAdes)	Host-Associated	Open in IMG/M
3300027966	Nasutitermes corniger P5 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P5 (SPAdes)	Host-Associated	Open in IMG/M
3300027984	Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5 (SPAdes)	Host-Associated	Open in IMG/M
3300028325	Nasutitermes corniger P1 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P1 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20172J14457_100338282	3300001343	Termite Gut	MLINGVNMNIKLTRIPEAFYLLAPTDDTKVRIKILD
JGI20172J14457_100573991	3300001343	Termite Gut	MLINGVDMSIKLTRTPEAFYLLAPTDDTKVRIKILDATLLITQVELKPPL
JGI20167J15610_100198063	3300001542	Termite Gut	MLINGVDLNIQLTRAPEAFYLFALSDDTKWHIKILGATLFIAQAEL*
JGI20163J26743_114491613	3300002185	Termite Gut	MLINGVDMNIKLTRAPESFYLLTPSDDANVRIKILDATLFITQVELKPPLL
JGI20169J29049_105145981	3300002238	Termite Gut	KLTRTPEAFYLLAPKDDTKVRIKILDATLFITQVELKPPFTLSSR*
JGI20169J29049_106124901	3300002238	Termite Gut	DKMLINGVDMNIKLTRTPEAFYLLAPKDDTKVCIEILDAILFITQVELKPLYS*
JGI20169J29049_108409591	3300002238	Termite Gut	MLINGVDMSIKLTRTPEAFYLLAPTDDTKVRIKILDATLLITQV
JGI20169J29049_110872022	3300002238	Termite Gut	LGVTLTRAPDAFYLLAPSDDTIVRIKILDACLFITQAELEPLILA
JGI20169J29049_111912383	3300002238	Termite Gut	MLINGVDLYIKLICTPEAFYLLAPTDDTEVRIKILYATLFTTQVK
JGI20169J29049_112801411	3300002238	Termite Gut	LINGVDMNIKLTRTPEAFYLLAPNDDTKVRIKSLDATLFITQVELKPLYS*
JGI20169J29049_113763924	3300002238	Termite Gut	MNIKLTRIPEAFYLLAPTDDTKVRIKILDATLFITQVELKPPSTLSSR*
JGI20169J29049_114048113	3300002238	Termite Gut	LLINGVDINIKLTRASESFYLLATSDDTKLRSKILDANLFITQAELNALLF*
JGI20169J29049_114465916	3300002238	Termite Gut	MLINGVDMNIKLTRAPEAFYLLAPTDDTKVRIRILDATLYYSSRNPLYY*
JGI20171J29575_117926572	3300002308	Termite Gut	NIKLTRTPEAFYLLAPKDDTKVRIKILDAILFITQVELKPLYS*
JGI20171J29575_122588862	3300002308	Termite Gut	GVDMNIKLTRTPEAFYLLAPNDDTKVRIKSLDATLFITQVELKPLYS*
JGI20171J29575_124385521	3300002308	Termite Gut	MLINGVDLYIKLICTPEAFYLLAPTDDTEVRIKILYATLFTTQVKLKTLSF*
JGI20171J29575_125833004	3300002308	Termite Gut	MLINGVDMNIKLTRTPEAFYLLAPTDDTKVRIRILDATLYYSSR
JGI24695J34938_100962882	3300002450	Termite Gut	MLINGVDMNIKLARAPDAFYLLAPLDDNKVRIKLLDATILSLRLNRSPLFYLLTLFWENAKLSCYTYTN
JGI24695J34938_102057752	3300002450	Termite Gut	MLNNGVEINIKLTRASETFYLLAPSDNKVRIKILDATLFITQVEFKPLFF*
JGI24695J34938_103973592	3300002450	Termite Gut	MLINGVDMNIKLTRALDAFYLLAASDDNKVRIKILDATLFITQVELMPLFFLLTLMFWE*
JGI24703J35330_108209651	3300002501	Termite Gut	KMLINGVDMNIKLTRAPEGFYLLAPSDDNKLRIKILDATLFINQVN*
JGI24703J35330_112402402	3300002501	Termite Gut	MSIKLTRAPESFYLLAPSDDNKLRIKILDATLFINQVELK
JGI24703J35330_114573594	3300002501	Termite Gut	MLINGVDMNIELTRAPEGFYLLATSDDNKLRIKILDATLFINQDELKPP
JGI24703J35330_115088092	3300002501	Termite Gut	MLINGVDMNIKLTLHQKLSFLTTSDDTKLRIKILDATLFITHVE*
JGI24703J35330_116754544	3300002501	Termite Gut	MLINGVNMNIKITRASEAFYLLAPSDDTKLCIKILDATLL*
JGI24703J35330_117171276	3300002501	Termite Gut	MLINGVDMNIKLTRAPEVFYLLAPLYDTKLRFIILDATSFIS*
JGI24703J35330_117316942	3300002501	Termite Gut	MLINGLHMDIKLTGALEAFYLLAPSEDTKLRINILDATLSMTQV*
JGI24703J35330_117401786	3300002501	Termite Gut	MLIHGVDMNIKLTRAPESFYLLVPSDDTKLSIKILDATLFITEIELKPSSYCSC*
JGI24705J35276_114492371	3300002504	Termite Gut	MLINSIDINIKLTRAPEGFHLLAPSDDNKLRIKILDATLFINQVE
JGI24705J35276_121249014	3300002504	Termite Gut	MLINGVDMNIELTRAPEGFYLLATSDDNKLRIKILDATLFINQDEL
JGI24705J35276_121746344	3300002504	Termite Gut	NGVDMNIKLTCAPEGFYLLAPSDDNKLRITILDATLFTN*
JGI24697J35500_106340471	3300002507	Termite Gut	MLINGVDMNIKLTRAPETFYLLAPSGDIELCIKILDATVFNT
JGI24697J35500_107868291	3300002507	Termite Gut	MNIKLTRAPEAFYLLAPSDDTKVCIKILDATLFITQVELKPPLLLAHANV
JGI24697J35500_112612943	3300002507	Termite Gut	MVINGVDMNIKLTRSPVTFCLLAPSDDIKLRVKILNDILFFIQVELKPPLLAHADVWL*
JGI24699J35502_108487192	3300002509	Termite Gut	MVINGVDMNVKLTRAPEAFYLLAPSDDTKVRIKILDASLFMTEVELKPLFCLLTPMFWE*
JGI24694J35173_101182382	3300002552	Termite Gut	MLINGVDMNIKLTRAPDAFYLLAPSDDNKVRIKILDATLFITQVELKTLFFLLTLMFWE*
JGI24694J35173_101497223	3300002552	Termite Gut	MNINLHVRQIFYLLALSDDNKVRIKISDATLFIAQVELKPLF
JGI24694J35173_102333163	3300002552	Termite Gut	MLINSVDMNIKLTCAPDALYLLAPSEDNKVLIKILDATLFIIQFVLKPPLFLLTLML*
JGI24694J35173_103208091	3300002552	Termite Gut	MLINCVDMNIKFTRAPDAFYLLAPXDDNKXRIKMLDATLFITQFEL
JGI24694J35173_103426472	3300002552	Termite Gut	MNVVDMNIKLTSAPNAFYLLTLSDDNKVRIKILAATLFITQVELKATXXXCSR*
JGI24694J35173_103478891	3300002552	Termite Gut	MFSSDKMSINGVDMKIKLTRAPESFYLLAASEENMVRIKILDATLFITQVELKPLFFRLTIIF*
JGI24694J35173_105746132	3300002552	Termite Gut	MLINGVDINIXLTRAPESFYLGGPSGDNKVRIKILYDTLFITQAELKPLFF*
JGI24694J35173_106074711	3300002552	Termite Gut	MLINGVDRNIKLIRAPDAFYLLVASDDNKLRIKILDAALFITQVELKPLFFLLTLMFCE*
JGI24694J35173_106688361	3300002552	Termite Gut	MIINGVDMNIRFTRAPNAFLSLAPSDDNNVRFNNLDATLFNTQVEL*
JGI24694J35173_107860402	3300002552	Termite Gut	MLINGVDMNIKLTRAPNAIYLLAPSDNNKVGIKKLDATHFITMVELKPPLL
JGI24696J40584_123333351	3300002834	Termite Gut	MRINGVDMNIKLTRASDVFYLLANSYDNKVRIKILDATLFIAQVELKPPLLHAHANV
JGI24696J40584_126549811	3300002834	Termite Gut	VDMNIKLARAPESFCLLAPSDDNKVRIKILDATLFITQAELKPLFF*
JGI24696J40584_126653701	3300002834	Termite Gut	MLINGLDMNIKFTRAPNYFYFLVSSDNNKMRIKILDATLFITQVE
JGI24696J40584_128135531	3300002834	Termite Gut	MLINGVDMNIKLSNAPDAFYLLALLDDNKVCIKILDDTLLSLRLN*
JGI24696J40584_129134592	3300002834	Termite Gut	MLINGVDMNIKLTRGPDAFYLLTPTDNKVRIKILNATLFITQV*
JGI24696J40584_129466383	3300002834	Termite Gut	MNVVDMNIKLTSAPNAFYLLTLSDDNKVRIKILAATLFITQVELKATL
Ga0072940_13304032	3300005200	Termite Gut	MLINGVDMNIQLTHASEAFYLFALSDDTKWRIKILDAQAEL*
Ga0072941_15089662	3300005201	Termite Gut	MVINGVDMNIKLTCSPVTFYLLAPSDDIKLRIKILDATFSITQVELKPLFILLKLMFWV*
Ga0082212_104508312	3300006045	Termite Gut	MNIKLTRATEVFYLLAPSDNTTLRIKILDATLFITEVELKPLFFLFMLMFWE*
Ga0082212_105547251	3300006045	Termite Gut	MLINGVDMKINLTRAPEGFYLLAPLDDNKLRIKILDATLFITQV*
Ga0123357_1000450716	3300009784	Termite Gut	MLINGVDMNIKLTLAPEAFYLFAPSDQSKLRIRILDASLFITQVELKPFFFLLTLMFWE*
Ga0123357_100068027	3300009784	Termite Gut	VLEITRDPEVFYILALSDDNKKRIKILDATLFITQVQWKPLFLLLTPMFWD*
Ga0123357_100448495	3300009784	Termite Gut	MNIKLTRAPEAFYLLAPSDDTKVRIKILGATLFITQIELLLLTLIFWA*
Ga0123357_103379392	3300009784	Termite Gut	MDCSMLTCLGSDKMLINGVDMNIKLTRALQALYLLAPSDDNKVRIKILNATLVITPVGLKPLFFLTLMFWE*
Ga0123355_105712271	3300009826	Termite Gut	MNGVDMNIKLTRAPETFYILALSDDDKVRIKILDATLFITQVELKPHLLL
Ga0123356_139056931	3300010049	Termite Gut	MNIKLTRASGASYLLAASDHNRVRIKILDATLFITQFE*
Ga0131853_100045748	3300010162	Termite Gut	MNIKMTRAPEAFYLFTLPDHTKERIKILDATLFTIQF*
Ga0131853_100080879	3300010162	Termite Gut	MNIKLTRAPEAFYLLSPSDDNKVRITILGSNIFITQVELKPHLFLAHANIWE*
Ga0131853_100316386	3300010162	Termite Gut	MNIKLTRATESFYLLAPSDDKRVRIKILDATLFITQVELNLPLLLAHTNV*
Ga0131853_100802523	3300010162	Termite Gut	MNIKLSRAHESFYILIPSDDNKVRIKILDATLLITQVELKHPSSISSH*
Ga0131853_102416061	3300010162	Termite Gut	MLINGVDMNIKLTRAPESFYLLAPSDDNKVRIKILDANLFITQPNNPLFY
Ga0131853_102849354	3300010162	Termite Gut	MLINGVDMNIKLTRAPESFYLLAPSDDNKVRIKILDAT
Ga0131853_105638772	3300010162	Termite Gut	MLIDGVDMNIKLTRAPESFYLLAPSDDNKVRIKILDATLFITQAELK
Ga0131853_111562751	3300010162	Termite Gut	MLVHAVDMTIKLTRAPESFYLLALSDENKVRIKILDATLFIT
Ga0123353_101795511	3300010167	Termite Gut	MLINGADMNIKLTRAPETFYLLAPSDENKVRIKILDATLFITQAELKPPLL
Ga0123353_103117871	3300010167	Termite Gut	MQINGVDINVKLTRAPDAYFLLAPSADNKVRIDILDATLYVTQVELKP
Ga0123353_113030421	3300010167	Termite Gut	LFNSDKILIIGIDVKINLTRATESFYLLAPSGDVKLGIRILDATLFITQ
Ga0136643_103468792	3300010369	Termite Gut	MNIKLTRAPESLYLLAPSDDNKVRIKILDATLLITQAELKPLFYKLTLMF*
Ga0136643_104838782	3300010369	Termite Gut	MLIDGVDMNIKLTRAPESFYLLAPSDDNKVRIKILDATLFITQ
Ga0136643_107565192	3300010369	Termite Gut	MLVHAVDMTIKLTRAPESFYLLALSDENKVRIKILDATLFITQAELKSPLL
Ga0123354_100664741	3300010882	Termite Gut	MLINGVDMNIKLTRAPESFYLLAPSDDNKVRIKILDATLFITQAE
Ga0123354_102877943	3300010882	Termite Gut	MNITLTRAPESFYLLAPSDDNKVRIKILDATLFITQ
Ga0209424_10005194	3300027539	Termite Gut	MLINGVNMNIKLTRIPEAFYLLAPTDDTKVRIKILDATLFITQVELKPPSTLSSR
Ga0209423_100823932	3300027670	Termite Gut	MLINGVDLNIQLTRAPEAFYLFALSDDTKWHIKILGATLFIAQAEL
Ga0209423_101883662	3300027670	Termite Gut	MNIKLTRTPEAFYLLAPNDDTKVRIKSLDATLFITQVELKPLYS
Ga0209423_103670522	3300027670	Termite Gut	MLINGVDLYIKLICTPEAFYLLAPTDDTEVRIKILYATLFTTQVKLKTLSF
Ga0209423_104062781	3300027670	Termite Gut	MGGKHAVFFNSDKILINGVDMNIKLTQTPEAFYLLAPNHDTKVRIKILDATFFITQVELKPLYS
Ga0209755_100229305	3300027864	Termite Gut	MFSSDKMSINGVDMKIKLTRAPESFYLLAASEENMVRIKILDATLFITQVELKPLFFRLTIIF
Ga0209755_100260002	3300027864	Termite Gut	MLINGVDRNIKLIRAPDAFYLLVASDDNKLRIKILDAALFITQVELKPLFFLLTLMFCE
Ga0209755_100283566	3300027864	Termite Gut	MLINGLHMNIKLARAPESFYLLVPLDYNKVRIKILEAALFITQVELNPPFSSSR
Ga0209755_100331666	3300027864	Termite Gut	MLINGVDMNIKLTRALDAFYLLAASDDNKVRIKILDATLFITQVELMPLFFLLTLMFWE
Ga0209755_101198322	3300027864	Termite Gut	MLNNGVEINIKLTRASETFYLLAPSDNKVRIKILDATLFITQVEFKPLFF
Ga0209755_101439025	3300027864	Termite Gut	MLTSGVDMNIKHTRAADSFYLLAPSDDNKVLIKNLDATLFITHVELKPPFLLLTLKFYE
Ga0209755_101944863	3300027864	Termite Gut	MLVNGVDMNNKLTRAPDSFYLLAHSDDTKIRIKIVDATLFISLVELNLHLLLAHANVLE
Ga0209755_102404003	3300027864	Termite Gut	MLINGVDINNKLTRAPDASYILAPSDDNKVRIKILDATLFITQVELKPHFFLLNFTIWE
Ga0209755_104824621	3300027864	Termite Gut	MNIKLTRTPDAILFLAASDNKVLIKIXDNTLFITQVELKPLFFKFA
Ga0209755_109464691	3300027864	Termite Gut	MLINGVDMYIKITRAPDAFYLQTHSDDNEVRIKILDATSSITQVELKTPLLLAH
Ga0209755_112336322	3300027864	Termite Gut	VDINIKLTRAPESFYLGGPSGDNKVRIKILYDTLFITQAELKPLFF
Ga0209738_101520312	3300027966	Termite Gut	MLINGVDMNIKLTRTPEAFYLLAPNDDTKVRIKSLDATLFITQVELKPLYS
Ga0209629_108090842	3300027984	Termite Gut	MKIKLTRAPEYFYQLAPSDDAKVRIKIIDATLFITQVELKS
Ga0268261_100029866	3300028325	Termite Gut	MLVNVVEMNTKLTRTPEAFHLLAPNDDTKVRIKILDAILFITQVELKPLYSYLTLMF
Ga0268261_1000641511	3300028325	Termite Gut	MNIKVTRAPEAFYLFAPSDDTKFRIKILDATLFITQTELKPLSS
Ga0268261_100105571	3300028325	Termite Gut	MNIKLTRTPEAFYLLAPTDDTKVRIKILDATLLITQVELKPPLLLAH
Ga0268261_100519884	3300028325	Termite Gut	MNIKLTRIPEAFYLLAPTDDTKVRIKILDATLFITQVELKPPSTLSSR
Ga0268261_102103283	3300028325	Termite Gut	MIINGVDMNIKLTRTPEAFYLLAPNDDTKVRIKILDATLFITQVELKPLFS
Ga0268261_106097101	3300028325	Termite Gut	HVDLFNSDKILINGVDMNIKLTRTPEAFYLLAPNNNIKVHIKILDATLFITQVGLKPLYS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F104011

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences