Metagenome Family F104111

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F104111
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	77 residues
Representative Sequence	LPTTLPHRRRADEKPSPARIVFDFLFNAALVVSALILTFIVLVREEQYAFGQLQSPAQVIQQGPLDATGESLVIPPSN
Number of Associated Samples	74
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.32 %
% of genes near scaffold ends (potentially truncated)	22.77 %
% of genes from short scaffolds (< 2000 bps)	69.31 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.267 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil (41.584 % of family members)
Environment Ontology (ENVO)	Unclassified (51.485 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (82.178 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.57% β-sheet: 0.00% Coil/Unstructured: 59.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF03401	TctC	50.50
PF04325	DUF465	12.87
PF13193	AMP-binding_C	5.94
PF00990	GGDEF	1.98
PF12395	DUF3658	0.99
PF16177	ACAS_N	0.99
PF13827	DUF4189	0.99
PF02233	PNTB	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	50.50
COG1282	NAD/NADP transhydrogenase beta subunit	Energy production and conversion [C]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.27 %
Unclassified	root	N/A	26.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.27 %
Unclassified	root	N/A	26.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.27 %
Unclassified	root	N/A	26.73 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	71.29 %
Unclassified	root	N/A	26.73 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	61.39 %
Unclassified	root	N/A	26.73 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	43.56 %
Unclassified	root	N/A	26.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.73 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	5.94 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.73 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	5.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.73 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	5.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.73 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	5.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090004\|P1_DRAFT_NODE_285304_len_1544_cov_15_999352	All Organisms → cellular organisms → Bacteria → Proteobacteria	1594	Open in IMG/M
2124908029\|A2_v1_NODE_23517_len_1560_cov_8_255769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1610	Open in IMG/M
2124908043\|A2_c1_ConsensusfromContig27582	Not Available	661	Open in IMG/M
2140918007\|ConsensusfromContig98612	Not Available	750	Open in IMG/M
2140918008\|ConsensusfromContig371270	Not Available	652	Open in IMG/M
2140918024\|NODE_269322_length_760_cov_11.743421	Not Available	810	Open in IMG/M
3300001412\|JGI20173J14856_1045793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	530	Open in IMG/M
3300001414\|JGI20174J14864_1003758	Not Available	835	Open in IMG/M
3300001414\|JGI20174J14864_1004976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	733	Open in IMG/M
3300001870\|JGI24129J20441_1035905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1213	Open in IMG/M
3300003369\|JGI24140J50213_10004459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5566	Open in IMG/M
3300003369\|JGI24140J50213_10157625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	722	Open in IMG/M
3300005938\|Ga0066795_10154360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	684	Open in IMG/M
3300005938\|Ga0066795_10256129	All Organisms → cellular organisms → Bacteria → Proteobacteria	517	Open in IMG/M
3300005947\|Ga0066794_10010760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2578	Open in IMG/M
3300005947\|Ga0066794_10149940	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300005952\|Ga0080026_10033909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1294	Open in IMG/M
3300005980\|Ga0066798_10018872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2374	Open in IMG/M
3300005980\|Ga0066798_10226904	All Organisms → cellular organisms → Bacteria → Proteobacteria	502	Open in IMG/M
3300005994\|Ga0066789_10011880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3853	Open in IMG/M
3300005994\|Ga0066789_10084652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1368	Open in IMG/M
3300005995\|Ga0066790_10484946	Not Available	529	Open in IMG/M
3300006055\|Ga0097691_1002674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11566	Open in IMG/M
3300006354\|Ga0075021_10806943	Not Available	606	Open in IMG/M
3300006642\|Ga0075521_10003191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5751	Open in IMG/M
3300006642\|Ga0075521_10063441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1637	Open in IMG/M
3300006642\|Ga0075521_10193818	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300006795\|Ga0075520_1016487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3704	Open in IMG/M
3300006949\|Ga0075528_10028730	Not Available	1407	Open in IMG/M
3300006950\|Ga0075524_10017158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2784	Open in IMG/M
3300006950\|Ga0075524_10134176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1068	Open in IMG/M
3300006972\|Ga0075518_1050900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	829	Open in IMG/M
3300009029\|Ga0066793_10445142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	742	Open in IMG/M
3300009029\|Ga0066793_10732554	Not Available	562	Open in IMG/M
3300009649\|Ga0105855_1253461	Not Available	545	Open in IMG/M
3300009651\|Ga0105859_1096665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	791	Open in IMG/M
3300009661\|Ga0105858_1086314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	830	Open in IMG/M
3300009662\|Ga0105856_1080788	All Organisms → cellular organisms → Bacteria → Proteobacteria	931	Open in IMG/M
3300009839\|Ga0116223_10440144	Not Available	763	Open in IMG/M
3300010379\|Ga0136449_100193146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3890	Open in IMG/M
3300010379\|Ga0136449_100781730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1582	Open in IMG/M
3300010396\|Ga0134126_10130235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3067	Open in IMG/M
3300010396\|Ga0134126_11090626	Not Available	891	Open in IMG/M
3300012931\|Ga0153915_10228182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2054	Open in IMG/M
3300012931\|Ga0153915_11382815	Not Available	823	Open in IMG/M
3300012931\|Ga0153915_11975258	Not Available	683	Open in IMG/M
3300012964\|Ga0153916_13303781	Not Available	507	Open in IMG/M
3300013770\|Ga0120123_1032873	Not Available	1080	Open in IMG/M
3300014054\|Ga0120135_1000342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2943	Open in IMG/M
3300014489\|Ga0182018_10361592	Not Available	781	Open in IMG/M
3300014498\|Ga0182019_10107100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1719	Open in IMG/M
3300014501\|Ga0182024_10005093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	29683	Open in IMG/M
3300015075\|Ga0167636_1016562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1038	Open in IMG/M
3300015080\|Ga0167639_1000551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5883	Open in IMG/M
3300015090\|Ga0167634_1005532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1722	Open in IMG/M
3300022518\|Ga0224548_1013980	All Organisms → cellular organisms → Bacteria → Proteobacteria	888	Open in IMG/M
3300022881\|Ga0224545_1017124	All Organisms → cellular organisms → Bacteria → Proteobacteria	1059	Open in IMG/M
3300025474\|Ga0208479_1004689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2885	Open in IMG/M
3300025474\|Ga0208479_1011868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1863	Open in IMG/M
3300025475\|Ga0208478_1002086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	5407	Open in IMG/M
3300025475\|Ga0208478_1002203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5242	Open in IMG/M
3300025481\|Ga0208079_1083708	Not Available	622	Open in IMG/M
3300025481\|Ga0208079_1083728	Not Available	622	Open in IMG/M
3300025494\|Ga0207928_1003454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2916	Open in IMG/M
3300025504\|Ga0208356_1043060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	913	Open in IMG/M
3300025505\|Ga0207929_1001918	All Organisms → cellular organisms → Bacteria	4842	Open in IMG/M
3300025505\|Ga0207929_1003633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3243	Open in IMG/M
3300025505\|Ga0207929_1111505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	509	Open in IMG/M
3300025509\|Ga0208848_1001112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5152	Open in IMG/M
3300025509\|Ga0208848_1002950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3308	Open in IMG/M
3300025509\|Ga0208848_1012797	All Organisms → cellular organisms → Bacteria → Proteobacteria	1771	Open in IMG/M
3300025533\|Ga0208584_1126959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	593	Open in IMG/M
3300025579\|Ga0207927_1015807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2413	Open in IMG/M
3300025579\|Ga0207927_1103292	Not Available	643	Open in IMG/M
3300025604\|Ga0207930_1013083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2444	Open in IMG/M
3300025650\|Ga0209385_1032498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2017	Open in IMG/M
3300025650\|Ga0209385_1196357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	562	Open in IMG/M
3300025725\|Ga0209638_1009894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5072	Open in IMG/M
3300025750\|Ga0209747_1111387	Not Available	913	Open in IMG/M
3300025774\|Ga0209586_1008719	All Organisms → cellular organisms → Bacteria → Proteobacteria	716	Open in IMG/M
3300025852\|Ga0209124_10083197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1328	Open in IMG/M
3300025878\|Ga0209584_10044267	All Organisms → cellular organisms → Bacteria → Proteobacteria	1567	Open in IMG/M
3300025878\|Ga0209584_10119325	Not Available	982	Open in IMG/M
3300025888\|Ga0209540_10447586	Not Available	692	Open in IMG/M
3300026223\|Ga0209840_1076569	Not Available	732	Open in IMG/M
3300026291\|Ga0209890_10003274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	7044	Open in IMG/M
3300026291\|Ga0209890_10051255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1523	Open in IMG/M
3300027854\|Ga0209517_10089979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2099	Open in IMG/M
3300027854\|Ga0209517_10123842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1696	Open in IMG/M
3300031521\|Ga0311364_12116483	Not Available	551	Open in IMG/M
3300031595\|Ga0265313_10325601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	613	Open in IMG/M
3300031902\|Ga0302322_101088915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	966	Open in IMG/M
3300032160\|Ga0311301_10245383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2965	Open in IMG/M
3300032160\|Ga0311301_10768903	Not Available	1333	Open in IMG/M
3300032770\|Ga0335085_12037690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	581	Open in IMG/M
3300032782\|Ga0335082_10360042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1321	Open in IMG/M
3300033004\|Ga0335084_11736200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	613	Open in IMG/M
3300033433\|Ga0326726_10768093	Not Available	932	Open in IMG/M
3300033818\|Ga0334804_044631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1321	Open in IMG/M
3300033887\|Ga0334790_008308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	5813	Open in IMG/M
3300034124\|Ga0370483_0007670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3003	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.01%
Host-Associated	Host-Associated	0.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.06%
Aquatic	Environmental → Aquatic	4.95%
Plants	Host-Associated → Plants	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.13%
Peat	Environmental → Terrestrial → Peat	6.93%
Freshwater	Environmental → Aquatic → Freshwater	3.96%
Sediment	Environmental → Aquatic → Sediment	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	25.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.99%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.99%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	49.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	21.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.93%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	41.58%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	11.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	5.94%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	4.95%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	3.96%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	3.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.98%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.98%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.98%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.98%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.99%
Glacier Forefield Soils	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soils	0.99%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.99%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.99%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.99%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.99%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090004	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
2124908029	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
2140918024	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300001412	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300001414	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012	Environmental	Open in IMG/M
3300001870	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005980	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil leachate replicate DNA2013-203	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006949	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300006972	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB136-A	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009649	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059	Environmental	Open in IMG/M
3300009651	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063	Environmental	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014054	Permafrost microbial communities from Nunavut, Canada - A34_5cm_12M	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015075	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G5C, Northern proglacial tributary margin, adjacent to top of river)	Environmental	Open in IMG/M
3300015080	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6C, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015090	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G5A, Northern proglacial tributary margin, adjacent to top of river)	Environmental	Open in IMG/M
3300022518	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 20-24	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025475	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025494	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025504	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025505	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025533	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025750	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-311 (SPAdes)	Environmental	Open in IMG/M
3300025774	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-4B (SPAdes)	Environmental	Open in IMG/M
3300025852	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300026223	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P1_DRAFT_00617980	2088090004	Soil	LPTTLPHRRRADEKPSPARIVFDFLFNAALVVSALILTFIVLVREEQYAFGQLQSPAQVIQQGPLDATGESLVIPPSN
A2_v1_00147420	2124908029	Soil	LPTTLPHRRRADEKPSRARTVFDFLFNTTLIVSALILTFIVLVREEQYAFGQPESPAQAIEQSAQQSPLDGGHPVIPPSN
A2_c1_00713590	2124908043	Soil	KPSRARTVFDFLFNTALIVSALILTFIVLVREEQYAFGQPESPAQAIEQGPVDTTGERPVFPTSK
A_all_C_02022580	2140918007	Soil	KPSRARTVFDFLFNTALMVSALILTFIVLVREEQYAFGQPESPAQAIEQGPVDTTGERPVFPTSK
Bog_all_C_01321440	2140918008	Soil	LPTTLPHRRRADEKPSPARIVFEFLFNAAMVVSALILTFIVLVREEQYAFGQLQSPAQVIQQGPLD
B_all_v_01897520	2140918024	Soil	LPTTLPHRRRADEKPSRARAVFDFLFNTALVVSALILTFIVLVREEQYAFGQPESPAQAIEQAAQQGLLDTTGESPVIPPSN
JGI20173J14856_10457931	3300001412	Arctic Peat Soil	SLARTIFDFLFNAVLVTSALILTFIVLVREEQYAFGQLQSPAQVIQQGPLDTTSESLVIPPSN*
JGI20174J14864_10037582	3300001414	Arctic Peat Soil	LPTTLPHRRRADEKPSRARTVFDFLFNTALIVSALILTFIVLVREEQYAFGQPESPAQAIEQAAQQGLLDTTGESPVIPPSN*
JGI20174J14864_10049762	3300001414	Arctic Peat Soil	PHRRRADEKHSPARIVFDFLFNAALVVSALILTFIVLVREEQYAFGQLQSPAQVIQKGPLDTTGESLVIPPSN*
JGI24129J20441_10359051	3300001870	Arctic Peat Soil	LPTTLPHRRRADEKPSPARIVFEFLFNAAMVVSALILTFIVLVREEQYAFGQLQSPAQVIQQGPLDTTGESLVIPPSN*
JGI24140J50213_100044593	3300003369	Arctic Peat Soil	LPTTLPRRRRADEKPSRARTVFDFLFNTALVVSALILTFIVLVREEQYAFGQPESPAQAIEQAAQQGLLDTTGESPVIPPSN*
JGI24140J50213_101576251	3300003369	Arctic Peat Soil	YPLPTTLPHRRRADEKHSPARIVFEFLFNAAMVVSALILTFIVLVREEQYAFGQLQSPAQVIQQGPLDATGESLVIPPSN*
Ga0066795_101543601	3300005938	Soil	LPTNLPLRRRVDEKPSLARTIFDFLFNAVLVTSALILTFIVLVREEQYAFGQLQSPAQVIQQGPLDTTSESLVIPPSN*
Ga0066795_102561292	3300005938	Soil	LPTTLPHRRRADEKHSPARIVFDFLFNAALVVSALILTFIVLVREEQYAFGQLQSPAQVIQQGPLDATGESLVIPPSN*
Ga0066794_100107602	3300005947	Soil	LPTTLPHRRRADEKPSPARIVFEFLFNAAMVVSALILTFIVLVREEQYAFGQLQSPAQVIQQGPLDATGESLVIPPSN*
Ga0066794_101499402	3300005947	Soil	LPTNLPLRRRVDEKPSLARTIFDFLFNAVLVTSALILTFIVLVREEQYAFGKQQIAIQAIEQAALQSPPDGGRWVTPPSN*
Ga0080026_100339091	3300005952	Permafrost Soil	LPTTLPHRRRADEKPSRARTVFDFLFNTALIVSALILTFIVLVREEQYAFGQPESPAQAIEQAARQSPLDG*
Ga0066798_100188724	3300005980	Soil	LPTTLPHRRRADEKHSPARIVFDFLFNAALVVSALILTFIVLVREEQYAFGQLQSPAQVIQQGPLDTTGESLVIPPSN*
Ga0066798_102269041	3300005980	Soil	WRCPLPTNLPLRRRVDEKPSLARTIFDFLFNAVLVTSALILTFIVLVREEQYAFGKQQIAIQAIEQAALQSPPDGGRWVTPPSN*
Ga0066789_100118806	3300005994	Soil	LPTNLPLRRRVDDKPSLARTIFDFLFNTVLVVSALILTFIVLVREDQYAFGKQQIAIQAIEQAALQSPPDGGRWVTPPSN*
Ga0066789_100846521	3300005994	Soil	LPTTLPHRRRADEKPSRARTVFDFLFNTALIVSALILTFIVLVREEQYAFGQPESPAQAIEQAARQSPDGGRPVIPPSN*
Ga0066790_104849462	3300005995	Soil	LPTTLPQRRRVDQKPSLARTVFDFLFNTVLVVSALILTFIVLVREEQYAFGKQQIAIQAIEQAALQSPPDGGRWVTPPSN*
Ga0097691_10026745	3300006055	Arctic Peat Soil	LPTTLPHRRRADEKHSPARIVFEFLFNAAMVVSALILTFIVLVREEQYAFGQLQSPAQVIQQGPLDATGESLVIPPSN*
Ga0075021_108069432	3300006354	Watersheds	LPTTLPPRRRADEKPSRARTVFDFLFNTALIVSALILTFIVLVREEQYAFGQPESPTQVIQQGPVDTTGERPVFPISK*
Ga0075521_100031918	3300006642	Arctic Peat Soil	LPTNLPLRRRVDDKPSLARTVFDFLFNTVLVVSALILTFIVLVREEQYAFGKQQIAIQAIEQAALQSPPDGGRWVTPPSN*
Ga0075521_100634412	3300006642	Arctic Peat Soil	LPTTLPHRRRADEKHSPARIVFEFLFNAAMVVSALILTFIVLVREEQYAFGQLQSPAQVIHQGPLDTTGESLVIPPSN*
Ga0075521_101938182	3300006642	Arctic Peat Soil	LPTTLPQRRRVDQKPSLARTVFDFLFNATLLVSALILTFIVLVREEQYAFGQQESPAQAIEQAAQQGRLDTTGESPVIPPSN*
Ga0075520_10164875	3300006795	Arctic Peat Soil	LPTNLPPRRRVDEKPSLARIVFDFLFNAILVTSALILTFIVLVREEQYAFGRQQIAIQAIEQAAQQNQPDGGRWIIPPSN*
Ga0075528_100287302	3300006949	Arctic Peat Soil	LPTNLPLRRRVDEKPSLARTIFDFLFNAVLVTSALILTFIVLVREEQYAFGKQQIAIQAIEQAALQSPPDGGHWVIPPSN*
Ga0075524_100171582	3300006950	Arctic Peat Soil	LPTTLPHRRRADEKHSPARIVFEFLFNAAMVVSALILTFIVLVREEQYAFGQLQSPAQVIQEGPLDAAGESLVIPPSN*
Ga0075524_101341762	3300006950	Arctic Peat Soil	LPTNLPLRRRVDEKPSLARTIFDFLFNAVLVTSALILTFIVLVREEQYAFGQLQSPAHVIQQGPLDTTGESLVIPPSN*
Ga0075518_10509002	3300006972	Arctic Peat Soil	LPTNLPPRRRVDKKPSLARIVFDFLFNAILVTSALILTFIVLVREEQYAFGQLQSPAQAIEQAAQQSLLHTTGESLVTPPSN*
Ga0066793_104451421	3300009029	Prmafrost Soil	LPLRRRVDEKPSLARTIFDFLFNAVLVTSALILTFIVLVREEQYAFGQLQSPAQVIQQGPLDTTSESLVIPPSN*
Ga0066793_107325542	3300009029	Prmafrost Soil	LPLRRRVDDKPSLARTVFDFLFNTVLVVSALILTFIVLVREEQYAFGKQQIAIQAIEQAALQSPAQVIQQGPLDTTSESLVIPPSN*
Ga0105855_12534612	3300009649	Permafrost Soil	LPHRRRADEKPSRARTVFDFLFNTALIVSALILTFIVLVREEQYAFGQPESPAQAIEQAARQSPDGGRPVIPPSN*
Ga0105859_10966652	3300009651	Permafrost Soil	EKPSRARTVFDFLFNTALIVSALILTFIVLVREEQYAFGQPESPAQAIEQSAQQSPLDGGHPVIPPSN*
Ga0105858_10863142	3300009661	Permafrost Soil	LPTTLPQRRRVDQKPSLARTVFDFLFNTALVVSALILTFIVLVREEQYAFGQPESPAQAIEQSAQQSPLDGGRPVIPPSN*
Ga0105856_10807882	3300009662	Permafrost Soil	LPTTLPHRRRADEKPSRARTVFDFLFNTALIVSALILTFIVLVREEQYAFGQPESPAQAIEQAARQIPDGGRPVIPPSN*
Ga0116223_104401441	3300009839	Peatlands Soil	LPTTLPHRCRADEKPSRARAVFDFLFNTALVVSALILTFIVLVREEQYAFGQPESPAQAIEQAAQRSLPD
Ga0136449_1001931462	3300010379	Peatlands Soil	LPTTLPHRCRADEKPSRARAVFDFLFNTALVVSALILTFIVLVREEQYAFGQPESPAQAIEQAAQQGLLDTTGESPVIPPSN*
Ga0136449_1007817303	3300010379	Peatlands Soil	LPTNLPHRSRADVKRSPWRIVFDILFNGALLVSALILTFIVLVREQQYAFGQQESPAQAIEQAAQQGLLDTTGESQIIPPSN*
Ga0134126_101302352	3300010396	Terrestrial Soil	LPTALPPRRDSEKRPLARTVFDVLFNTALVVSALILTFIVLVREEQYAFGHQQRPAQMIEQLAEQTQLDVTGESAVIPPLN*
Ga0134126_110906262	3300010396	Terrestrial Soil	LPTALPPRRGSEKRPLARTVFDVLFNTALVVSALILTFIVLVREEQYAFGHRQRPAQMIEQLAEQSQLDVTGERAVIPPLN*
Ga0153915_102281822	3300012931	Freshwater Wetlands	LPTTLPHRRRADEKHSPARIVFDVLFNAALVVSALILTFIVLVREEQYAFGQQESPAQVIQQGPLDTIGESLVIPPSN*
Ga0153915_113828152	3300012931	Freshwater Wetlands	LPHQHRVSKKRTLARTVIEFLFNTAMVVSALILTFIVLVRQEQYAFGRPENPAQAIEQTAHPSALEMTGKIQFIPPD*
Ga0153915_119752582	3300012931	Freshwater Wetlands	LPHRRRVSEKRSLARTIFDVLFNGAMVVSALILTFIVLVRQEQYAYGPRQSPPQAIQQSLMDTTGENRVIRPSN*
Ga0153916_133037811	3300012964	Freshwater Wetlands	LPHRRRVSEKRSLARTVFDVLFNATMVVSALILTFIVLVRQEQYAYGPRQSPPQAIQQSL
Ga0120123_10328732	3300013770	Permafrost	LPHRRRADAKPSPARVVLSFLFNGAMLVSALILAFIVLVREEQYALGQQPSQAGVIQQADDTTGESQAIPPLN*
Ga0120135_10003422	3300014054	Permafrost	LPTTLPHRRRTDVKPSPARAVLSFLFNGAMLVSALILAFIVLVREEQYALGQQPSQAGVIQQADTTGESQAIPPLN*
Ga0182018_103615921	3300014489	Palsa	LPHRRRADVKPSPARTVLCFLFNGAMLVSALILAFIVLVREEQYALGQQPSAAGVIQQADDTTGESQAIPPLN*
Ga0182019_101071003	3300014498	Fen	LPPRRRDDEKPSLARTVFDFLFNAILVTSALILTFIVLVREEQFAFGRQQIAIQAIEQTALQNPPDGGHWVTPPSN*
Ga0182024_1000509329	3300014501	Permafrost	LPHRRRADVKPSPARTVLSFLFNGAMLVSALILAFIVLVREEQYALGQQPSAAGVIQQADDTTGESQAIPPLN*
Ga0167636_10165621	3300015075	Glacier Forefield Soils	AGENRWRCPLPTTLPHRRRADVKPSRARTVFDFLFNTALVVSALILTFIVLVREEQYAFGQPESPAQAIEQAAQQGLLDTTGESPVIPPSN*
Ga0167639_10005514	3300015080	Glacier Forefield Soil	LPTTLPHRRRSDEKPSLSRTVFNILFNGAMVVSALIFAFIVLVREEQYAHGQRPAPAIEQGSVDTTGESQIIPPSN*
Ga0167634_10055322	3300015090	Glacier Forefield Soil	LPTTLPHRRRADVKPSRARTVFNFLFNTALVVSALILTFIVLVREEQYAFGQPESPAQAIEQAAQQGLLDTTGESPVIPPSN*
Ga0224548_10139802	3300022518	Soil	LPTTLPHRRRADEKHSPARIVFDFLFNAALVVSALILTFIVLVREEQYAFGQLQSPAQVIQQGPLDTTGESLVIPPSN
Ga0224545_10171242	3300022881	Soil	LPTTLPHRRRADVKPSPARTVLCFLFNGAMLVSALILAFIVLVREEQYALGQQPSAAGVIQQADDTTGESQAIPPLN
Ga0208479_10046892	3300025474	Arctic Peat Soil	LPTTLPRRRRADEKPSRARTVFDFLFNTALVVSALILTFIVLVREEQYAFGQPESPAQAIEQAAQQGLLDTTGESPVIPPSN
Ga0208479_10118681	3300025474	Arctic Peat Soil	LPTTLPHRRRTDAKPSPARVVLSFLFNGAMLVSALILAFIVLVREEQYALGQQPSQAGVIQQADDTTGESQAIPPLN
Ga0208478_10020864	3300025475	Arctic Peat Soil	LPTTLPHRRRADAKPSPARVVLSFLFNGAMLVSALILAFIVLVREEQYALGQQPSQAGVIQQADDTTGESQAIPPLN
Ga0208478_10022034	3300025475	Arctic Peat Soil	LPTTLPHRRRADEKPSRARTVFDFLFNTALVVSALILTFIVLVREEQYAFGQPESPAQAIEQAAQQGLLDTTGESPVIPPSN
Ga0208079_10837081	3300025481	Arctic Peat Soil	LPTNLPLRRRVDEKPSLARTIFDFLFNAVLVTSALILTFIVLVREEQYAFGQLQSPAHVIQQGPLDTTGESLVIPPSN
Ga0208079_10837282	3300025481	Arctic Peat Soil	LPTTLPHRRRADEKHSPARIVFEFLFNAAMVVSALILTFIVLVREEQYAFGQLQSPAQVIQQGPLDTTGESLVIPPSN
Ga0207928_10034542	3300025494	Arctic Peat Soil	LPTTLPHRRRADEKPSRARTVFDFLFNTALVVSALILTFIVLVREEQYALGQQPSQAGVIQQADTTGESQAIPPLN
Ga0208356_10430602	3300025504	Arctic Peat Soil	LPTNLPHRRRTDVKPSPARAVLSFLFNGAMLVSALILAFIVLVREEQYALGQQPSQAGVIQQADTTGESQAIPPLN
Ga0207929_10019181	3300025505	Arctic Peat Soil	LPTNLPLRRRVDEKPSLARTIFDFLFNAVLVTSALILTFIVLVREEQYAFGQLQSPAQVIQQGPLDTTSESLVIPPSN
Ga0207929_10036334	3300025505	Arctic Peat Soil	LPTTLPHRRRADVKPSPARVVLSFLFNGAMLVSALILAFIVLVREEQYALGQQPSQAGVIQQVDDTTGESQAIPPLN
Ga0207929_11115052	3300025505	Arctic Peat Soil	TPLPTTLPHRRHADEKPSPARIVFEFLFNAAMVVSALILTFIVLVREEQYAFGQQESSAQAIEQAAQQGRLDTTGESPVIPPSN
Ga0208848_10011125	3300025509	Arctic Peat Soil	LPTTLPHRRRADEKPSRARTVFDFLFNTALIVSALILTFIVLVREEQYAFGQPESPAQAIEQAAQQGLLDTTGESPVIPPSN
Ga0208848_10029502	3300025509	Arctic Peat Soil	LPTNLPHRRRTDVKPSPARAVLSFLFNGAMLVSALILAFIVLVREEQYALGQQPSQAGVIQQVDDTTGESQAIPPLN
Ga0208848_10127972	3300025509	Arctic Peat Soil	LPTTLPHRRRADEKHSPARIVFDFLFNAALVVSALILTFIVLVREEQYAFGQLQSPAQVIQKGPLDTTGESLVIPPSN
Ga0208584_11269591	3300025533	Arctic Peat Soil	EKPSRARTVFDFLFNTALVVSALILTFIVLVREEQYAFGQPESPAQAIEQAAQQGLLDTTGESPVIPPSN
Ga0207927_10158074	3300025579	Arctic Peat Soil	LPTTLPHRRRADEKHSPARIVFEFLFNAAMVVSALILTFIVLVREEQYAFGQLQSPAQVIQQGPLDATGESLVIPPSN
Ga0207927_11032921	3300025579	Arctic Peat Soil	LPTNLPPRRRVDEKPSLARIVFDFLFNAILVTSALILTFIVLVREEQYAFGRQQIAIQAIEQAAQQNQ
Ga0207930_10130835	3300025604	Arctic Peat Soil	HRRRADAKPSPARVVLSFLFNGAMLVSALILAFIVLVREEQYALGQQPSQAGVIQQADDTTGESQAIPPLN
Ga0209385_10324982	3300025650	Arctic Peat Soil	LPTTLPHRRRADEKHSPARIVFEFLFNAAMVVSALILTFIVLVREEQYAFGQLQSPAQVIHQGPLDTTGESLVIPPSN
Ga0209385_11963571	3300025650	Arctic Peat Soil	LPPRRRVDEKPSLARIVFDFLFNAILVTSALILTFIVLVREEQYAFGRQQIAIQAIEQAAQQNQPDGGRWIIPPSN
Ga0209638_10098942	3300025725	Arctic Peat Soil	LPTTLPHRRRADEKPSPARIVFEFLFNAAMVVSALILTFIVLVREEQYAFGQLQSPAQVIQQGPLDTTGESLVIPPSN
Ga0209747_11113872	3300025750	Arctic Peat Soil	LPTNLPPRRRVDEKPSLARIVFDFLFNAILVTSALILTFIVLVREEQYAFGQPESPAQAIEQAAQQGLLDTTGESPVIPPSN
Ga0209586_10087192	3300025774	Arctic Peat Soil	LPTTLPHRRRADEKLSPARIVFDFLFNAILVTSALILTFIVLVREEQYAFGQLQSPAQVIQQGPLDTTGESLVIPPSN
Ga0209124_100831972	3300025852	Arctic Peat Soil	LPTTLPHRRRADEKHSPARIVFEFLFNAAMVVSALILTFIVLVREEQYAFGQLQSPAQVIQQGPLDAAGESLVIPPSN
Ga0209584_100442672	3300025878	Arctic Peat Soil	LPTNLPLRRRVDDKPSLARTVFDFLFNTVLVVSALILTFIVLVREEQYAFGKQQIAIQAIEQAALQSPPDGGRWVTPPSN
Ga0209584_101193252	3300025878	Arctic Peat Soil	LPHRRRADAKPSPARVVLSFLFNGAMLVSALILAFIVLVREEQYALGQQPSQAGVIQQADDTTGESQAIPPLN
Ga0209540_104475861	3300025888	Arctic Peat Soil	LPTTLPHRRRADEKHSPARIVFEFLFNAAMVVSALILTFIVLVREEQYAFGQLQSPAQVIQQGPLDTT
Ga0209840_10765691	3300026223	Soil	LPTNLPLRRRVDEKPSLARTIFDFLFNAVLVTSALILTFIVLVREEQYAFGKQQIAIQAIEQAALQSPPDGGRWVTPPSN
Ga0209890_100032748	3300026291	Soil	LPTTLPHRRRADEKPSRARTVFDFLFNTALIVSALILTFIVLVREEQYAFGQPESPAQAIEQAARQSPDGGRPVIPPSN
Ga0209890_100512552	3300026291	Soil	LPTNLPLRRRVDDKPSLARTIFDFLFNTVLVVSALILTFIVLVREDQYAFGKQQIAIQAIEQAALQSPPDGGRWVTPPSN
Ga0209517_100899791	3300027854	Peatlands Soil	TLPHRCRADEKPSRARAVFDFLFNTALVVSALILTFIVLVREEQYAFGQPESPAQAIEQAAQQGLLDTTGESPVIPPSN
Ga0209517_101238422	3300027854	Peatlands Soil	LPTNLPHRSRADVKRSPWRIVFDILFNGALLVSALILTFIVLVREQQYAFGQQESPAQAIEQAAQQGLLDTTGESQIIPPSN
Ga0311364_121164831	3300031521	Fen	LPTNLPPRRRDDEKPSLARTVFDFLFNAILVTSALILTFIVLVREEQFAFGRQQIAIQAIEQTALQNPPDGGHWVTPPSN
Ga0265313_103256012	3300031595	Rhizosphere	RCPLPTNLPLRRRVDDKPSLARVVFDFLFNTVLVVSALILTFIVLVREEQSAFGQPGGPVPAIEQTALQIPPDGGR
Ga0302322_1010889152	3300031902	Fen	TNLPPRRRDDEKPSLARTVFDFLFNAILVTSALILTFIVLVREEQFAFGRQQIAIQAIEQTALQNPPDGGHWVTPPSN
Ga0311301_102453832	3300032160	Peatlands Soil	LPTTLPHRCRADEKPSRARAVFDFLFNTALVVSALILTFIVLVREEQYAFGQPESPAQAIEQAAQQGLLDTTGESPVIPPSN
Ga0311301_107689031	3300032160	Peatlands Soil	LPTNLPHRSRADVKRSPWRIVFDILFNGALLVSALILTFIVLVREQQYAFGQQESPAQAIEQAAQQGLLDTTG
Ga0335085_120376902	3300032770	Soil	PRRVDEKPSPARTVANFLFNAAMMVSALILAFIVLVREEQYAFGRPESPAQAIEQTAPPSATATTGKSKVIPPSN
Ga0335082_103600421	3300032782	Soil	LPPRRHADKKRSLTRIVFDVVFNTALVVSALILAFIVLVREEQYAFGNSPLQLIQQSPVDTGESQVIRPSN
Ga0335084_117362002	3300033004	Soil	LPTTLPPRRQADEKHSLTRIVFDVVFNTALVVSALILAFIVLVREEQYAFGNSPLQLIQQSPLDTGESQVIRPSN
Ga0326726_107680931	3300033433	Peat Soil	LPTALPRRRRVTVKRSRARTIFDVLFNTAMVVSALILTFIVLVREEQYAFGQPKSPAQAIEQSSVDTTGGRPVIPPSN
Ga0334804_044631_913_1134	3300033818	Soil	LPHRRRADVKPSPARTVLCFLFNGAMLVSALILAFIVLVREEQYALGQQPSAAGVIQQADDTTGESQAIPPLN
Ga0334790_008308_3466_3687	3300033887	Soil	LPHRRRADVKPSPARTVLSFLFNGAMLVSALILAFIVLVREEQYALGQQPSAAGVIQQADDTTGESQAIPSLN
Ga0370483_0007670_1711_1932	3300034124	Untreated Peat Soil	LPHRRRADVKPSPARTVLSFLFNGAMLVSALILAFIVLVREEQYALGQQPSAAGVIQQADDTTGESQAIPPLN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F104111

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences