NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F104474

Metagenome Family F104474

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F104474
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 43 residues
Representative Sequence MKFGTPTQNETLMTIGRLKLKPEVEFQYGGRSFSETGSSYNSAVE
Number of Associated Samples 20
Number of Associated Scaffolds 99

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 15
AlphaFold2 3D model prediction Yes
3D model pTM-score0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont
(90.000 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(100.000 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 15.07%    β-sheet: 13.70%    Coil/Unstructured: 71.23%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.28
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 99 Family Scaffolds
PF00078RVT_1 1.01
PF00651BTB 1.01



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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Marine Gutless Worms SymbiontHost-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont90.00%
Marine Gutless Worms SymbiontHost-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms Symbiont10.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002181Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type A ELBA extract 3Host-AssociatedOpen in IMG/M
3300003853Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius tantulus BELIZE.1Host-AssociatedOpen in IMG/M
3300004087Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius tantulus BELIZE.1 (version 2)Host-AssociatedOpen in IMG/M
3300004098Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius algarvensis Type A CAVOLI.2 (version 2)Host-AssociatedOpen in IMG/M
3300004630Worm MetaG Olavius vacuus BAHAMAS.1Host-AssociatedOpen in IMG/M
3300005652Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1a BELIZE.1Host-AssociatedOpen in IMG/M
3300005653Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.1Host-AssociatedOpen in IMG/M
3300005970Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.2Host-AssociatedOpen in IMG/M
3300007818Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1 BERMUDA.2Host-AssociatedOpen in IMG/M
3300008215Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1 BERMUDA.1Host-AssociatedOpen in IMG/M
3300027044Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1 BERMUDA.2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027341Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius ullae BAHAMAS.1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027550Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius vacuus BAHAMAS.2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027556Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type G ELBA extract 2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027584Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type G ELBA extract 3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027585Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius algarvensis Type A CAVOLI.3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027620Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius algarvensis Type G CAVOLI (SPAdes)Host-AssociatedOpen in IMG/M
3300027624Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027658Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027661Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1a BELIZE.1 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24670J26820_1153084813300002181Marine Gutless Worms SymbiontMQITAKWSKSKPEVEFQYGGRLFFKNGSSYISLIST
Ga0049113_1000780943300003853Marine Gutless Worms SymbiontVQNHIPMTVTRSKLKPEVEFQYGGSLFLETGSSNISAVG*
Ga0066190_1011210323300004087Marine Gutless Worms SymbiontMPVQNQMPVTVKRSKLKPEVEFQYGGRLLSETKSSNISVVD*
Ga0065184_1001582623300004098Marine Gutless Worms SymbiontMTFVSLMQNELPNTLKPEVKFQYGGRLFSQIGNSYISVVD*
Ga0049105_100618283300004630Marine Gutless Worms SymbiontMQKDTAMTKIRLKSKPEIEFQYGGRPFSQTESSFISAVN*
Ga0049105_112138933300004630Marine Gutless Worms SymbiontMKNAMPMKMNRSKSKPEVEFQYGGRPFSQTGGSNNSAVD*
Ga0056135_1000547743300005652Marine Gutless Worms SymbiontMQNEMLMTADWSKLKPEVEFQYGGSSFSETGSSYNSAVD*
Ga0056135_1002291413300005652Marine Gutless Worms SymbiontMQNEIPMTADRSEWKPEVEFQYGGRSFSETGSSYNSVV
Ga0056135_1002628113300005652Marine Gutless Worms SymbiontMKFGMPTQNETLMTIGRLKLKPEVEFQYGGRSFSETGSSYNSAEIWYT*
Ga0056135_1002735123300005652Marine Gutless Worms SymbiontMIDIKFGTAMQNEMLMTIGRLKLKLEVEFQYGSRSFSETGSSYNSAAE*
Ga0056135_1004182153300005652Marine Gutless Worms SymbiontMVHLNTKFGLPVQNAMPMTIGKSKSKPEVAFQYSGRSFSETGSSYNSAVD*
Ga0056135_1004722433300005652Marine Gutless Worms SymbiontMHNEMPMTTDRSKLKPEVEFQYGGRLFSEIGSSYISAVD*
Ga0056135_1006236633300005652Marine Gutless Worms SymbiontMKFGTPTQNETLMMTGRLKLTPEVEFQYGGRSFSENGCSYNSAVE*
Ga0056135_1009781023300005652Marine Gutless Worms SymbiontMKFDTPKKNEMLMTSGRLKSKPEVEFQYGGRSFSETGSSYNSAVD*
Ga0056135_1014849413300005652Marine Gutless Worms SymbiontDGPIHIKFASPTQNEMLMTTGRLKSEREAELQYSGRSFSETGSSYNSAVD*
Ga0056135_1016261813300005652Marine Gutless Worms SymbiontMKFGTPTQNETLMTIGKLKLKPEVEVQYVGRPFSETGSSYNSAVE*
Ga0056135_1017562713300005652Marine Gutless Worms SymbiontMKFGMPTQNETPMTIGWLKLTSEVEFQYDGRSFSETGSSYNSAAE*
Ga0056135_1018135213300005652Marine Gutless Worms SymbiontNYAADGPIHIKFASPTQNEMMMTDGRLKSKPEVELQYGGRSFSETGSSYNSAVD*
Ga0056135_1019418713300005652Marine Gutless Worms SymbiontMKFGTPTQNEALMTIGRLKLKPEVECQYGGRSFSETGSSYNSAMD*
Ga0056135_1023612513300005652Marine Gutless Worms SymbiontMKFSTPMQNEMLMTIGRLKLKPEVEFQYGGRSFSETGSSYNSAAE*DIFT
Ga0056135_1023902813300005652Marine Gutless Worms SymbiontMKFGMPTQNKMLMTIGGLKLKLEIEFQYDGRSFSETGSSYNSAAE*
Ga0056135_1024874923300005652Marine Gutless Worms SymbiontMKFGVPTQNETLMTTGRSKLKPEVEFQYGGRSFSETGSSYNSAVD*
Ga0056135_1025239813300005652Marine Gutless Worms SymbiontMQNEMSMTIDM*KLKPEVEFQYGGRSFFETGSSYNSAVD*DIFTKF
Ga0056135_1037152713300005652Marine Gutless Worms SymbiontMQTELPTDRSKLKPEVEFQYGGLSFYETESSYNSAVD*DIFTKF
Ga0056135_1040104823300005652Marine Gutless Worms SymbiontGTPTQNEMLMTTGRLKSKPKVEFQYSGCSLSETGSSYNSAVE*
Ga0056135_1041870933300005652Marine Gutless Worms SymbiontPMTTDRSKSKPEVEFQYGGRSFSEPGSSYNSAVD*
Ga0056135_1046426813300005652Marine Gutless Worms SymbiontMKFGMLTQNEMLITNGELKSKSEVEFEYDGRSLFESGSS
Ga0056135_1049029723300005652Marine Gutless Worms SymbiontMKFGTPTQNETLMTIDRLKLKAEVEFQYGGRSFSETGSSYNS
Ga0056133_1001891723300005653Marine Gutless Worms SymbiontMKFGMPTQMLMMIGRLKLKPEVEFQYGGRSFSETGSSYNSAVE*
Ga0056133_1004545633300005653Marine Gutless Worms SymbiontMKFSVLTQNEMPMTTGRLKSKPEVEFQYDGRSLFETGSS
Ga0056133_1014580123300005653Marine Gutless Worms SymbiontMKFGVPMQNKMPMTIGGLKPKPEVEFQYGGCLFFET*
Ga0056133_1017122723300005653Marine Gutless Worms SymbiontMKFDTPKKNEMLMTSGRLKSKPEVEFQYGGRSFSETGSSYNSAV
Ga0056133_1023491233300005653Marine Gutless Worms SymbiontMQNEMPMTAYRSKLKPEVEFQYGGRSFFETGSSYNSAVD*DIFTKF
Ga0056133_1027170313300005653Marine Gutless Worms SymbiontMPMQNEMPMTTDRSESKPEVEFQYGGRSFSETGSSYNSAVE*
Ga0056133_1030310713300005653Marine Gutless Worms SymbiontMQNEMPMTADRSKLKPEVEFQYGGRSFSETGSSYKL*
Ga0056133_1039611523300005653Marine Gutless Worms SymbiontMVRFTQKFAVPMQNEIPMTADRSEWKPEVEFQYGGRSFSETGSSYNSAV*
Ga0056133_1042959523300005653Marine Gutless Worms SymbiontMKFGVPKQNEMPTTTGRLKSKPEVEFQYGGRSFSETGSSYN
Ga0056133_1049407213300005653Marine Gutless Worms SymbiontMAMTTDRLQSKPDVGFQYGGRSFFETGKSYNSAVE*DIFTKFG
Ga0056133_1049407223300005653Marine Gutless Worms SymbiontMKFGLPTQNEMPMTTDRSKSKPEVEFQYDDRSFSETGSSYNSAVD*
Ga0056133_1050823013300005653Marine Gutless Worms SymbiontMQNETLMTIARSELKSEVEFQYSDRSFSETGSSYNSAV
Ga0056133_1052081023300005653Marine Gutless Worms SymbiontVRFTRKFGMPMQNEMLMTTDRSKLKQEVEFQYGGRSFSETGSGYNSAVD*
Ga0056133_1053912823300005653Marine Gutless Worms SymbiontMPMTVGRLKLKPEVEFQYGSRSLFETGSSYNSAMER
Ga0056134_1001782413300005970Marine Gutless Worms SymbiontMENEMPMTTSGSKLKPEVEFQNNGRSFAQTGSSFNSAVD*
Ga0056134_1015011913300005970Marine Gutless Worms SymbiontMKFSKSMQNEMLMTTGGPKSKPEVEFQYLDRSFYKTGSSYNSAVN*
Ga0056134_1019150223300005970Marine Gutless Worms SymbiontMKFGMPKHNQMAMRTGRSKSQPEVEFQYGGRSFSETGSSYNSAVD*DIFTKFG
Ga0056134_1023329513300005970Marine Gutless Worms SymbiontMQNEMPMTTDRSKSKPEVEFQYGGRSFFETGISYNSVVD*
Ga0056134_1039355113300005970Marine Gutless Worms SymbiontMSHNYATDGPIHIKFRMLAQNEMPMTIALKSKREVEFQYGGRSFFETGSSYNSAVE*
Ga0056109_103705613300007818Marine Gutless Worms SymbiontVKFGVATQNEMPMTIGRLKPKAEVEFQYGGLSVSETGSSYNSAVH*
Ga0056109_106856713300007818Marine Gutless Worms SymbiontMKFGMPTQNETLMTIGMSKLKPEVEFQYSGGSFSETGSSHNSAVE*
Ga0056109_113205513300007818Marine Gutless Worms SymbiontMQNEMLMTADRSKLKPEVEFQYGGSSFSETGSSYNSAMD*
Ga0056109_115897423300007818Marine Gutless Worms SymbiontVPIRNEMPTTTNRSKSKPEVEFHYGGRSFSETGSSCNS
Ga0056108_103923353300008215Marine Gutless Worms SymbiontMKFGMPTQNKMLMTIGRLKLKLEIEFQYDGRSFSETGSSYNSAV
Ga0056108_104715433300008215Marine Gutless Worms SymbiontMQNEMLMRIGRLKSKPEVEFQCGGRSFSETGSSYNSAVD*DIFTK
Ga0056108_105599823300008215Marine Gutless Worms SymbiontMKFGVPTQNEMPMTIGRLKSKPEVEFQYGSHSFSETGSSYNSAVE*
Ga0056108_107216513300008215Marine Gutless Worms SymbiontMLMQNEMPMTTDTSILKPEVEFQYGGRSFSETGSSYNSAVD*
Ga0056108_107934933300008215Marine Gutless Worms SymbiontMKFGVPMQNEMLMTIGSLESKQEVEFQCGGRSFSEIGSSYNSAVD*
Ga0056108_108064713300008215Marine Gutless Worms SymbiontMTTGRLQLKPEIEFQYGGRSYSETGSSYNSAVE*DIFT
Ga0056108_110885013300008215Marine Gutless Worms SymbiontMKFSTPMQNEMLMTIGRLKLKPEVEFQYGGRSFFETGSSYSSAAD*
Ga0056108_111308323300008215Marine Gutless Worms SymbiontMKFGTPTQNETLMMTGRLKLTPEVEFQYGGPSFSENGCSYNSAVE*
Ga0056108_111817333300008215Marine Gutless Worms SymbiontLITTDRSKLKPEVEFQYGGHSFSENGSSYNSAVD*
Ga0056108_113591513300008215Marine Gutless Worms SymbiontMKFGAPTQNETLMTIGRLKLKPEVEFQYDGRSFSETGSSYNSAVE*
Ga0056108_115546013300008215Marine Gutless Worms SymbiontMKFGTPTQNETLMTIGRLKLKPEVEFQYGGRSFSETGSSYNSAVE*
Ga0056108_118026113300008215Marine Gutless Worms SymbiontMKFGMATQNATLMTIGMSKLKPELEFQYSGGSFSETGSSYNSAVE*
Ga0056108_132297113300008215Marine Gutless Worms SymbiontMKFGTPTQNETLMTIGKLKLKPEVEVQYVGRPFSGTGSSYNSAVE*
Ga0056108_133882113300008215Marine Gutless Worms SymbiontKQNEMLMTIGRLKLKPEVEFQYGDRSFYETGSSYNSAVD*
Ga0209785_104963613300027044Marine Gutless Worms SymbiontPTQNEMPMTADRSKLKPEVEFQYGGRSFFETGSSYNSAVD
Ga0209453_101948423300027341Marine Gutless Worms SymbiontMQFGTPMPNAMPMTLIRSKSKPEVEFQYGGLSFSETGSSNSSAVD
Ga0209255_106022313300027550Marine Gutless Worms SymbiontMTTYRSKSKPELEFQYGGRPFVETGSSFISAVDXDRN
Ga0209255_141100023300027550Marine Gutless Worms SymbiontNDLPMTINKSKSKQEASFQYGGRSFSETGSSFILAVD
Ga0209743_128749913300027556Marine Gutless Worms SymbiontNMPIAAVRSKLKPEVEIQYGGRLNFQNGSSYSSAAD
Ga0209637_109873113300027584Marine Gutless Worms SymbiontMQIGTPITEKWSKSKPEVEFQYGGRLYFETGSSNISAAN
Ga0209150_129171013300027585Marine Gutless Worms SymbiontNSMPITVVWSKLKPEVEFQYGGRSFFLTGNSYITDVD
Ga0209260_1011985113300027620Marine Gutless Worms SymbiontMQSDMPSAVIWSKLKPEVEFQYGGRLFFQTGSSYISAV
Ga0209789_1004415113300027624Marine Gutless Worms SymbiontMKFGTPTQNETLMMTGRLKLTPEVEFQYGGRSFSENGCSYNSAVE
Ga0209789_1018285413300027624Marine Gutless Worms SymbiontMKFGMPTQMLMMIGRLKLKPEVEFQYGGRSFSETGSSYNSAVE
Ga0209789_1019763823300027624Marine Gutless Worms SymbiontMQNDMPMTADRTKLKPEAEFQYGGRSLSDTGSSYNSAVELRIRH
Ga0209789_1022948913300027624Marine Gutless Worms SymbiontMKFGTPTQNEALMTIGRLKLKPEVECQYGGRSFSETGSSYNSAMD
Ga0209259_101128643300027658Marine Gutless Worms SymbiontMKFDTPKKNEMLMTSGRLKSKPEVEFQYGGRSFSETGSSYNSAVD
Ga0209259_103218013300027658Marine Gutless Worms SymbiontMKFSVLTQNEMPMTTGRLKSKPEVEFQYDGRSLFETGSSYN
Ga0209259_107265213300027658Marine Gutless Worms SymbiontESHTKFGVPMQNEMPMTTDRSKLKPEVEFQYGGRSFSETGSSYNSAVD
Ga0209259_111107413300027658Marine Gutless Worms SymbiontIQMRFGPTQNEMPMTNGRLKLEPEVEFQYGGRSVSENGCSYNSAAE
Ga0209259_111457613300027658Marine Gutless Worms SymbiontMQNEMLMTMDRLKLKPEVAFQYGGRSFSETGSSYNSAVD
Ga0209259_112168713300027658Marine Gutless Worms SymbiontMKFGVPMQNKMPMTIGGLKPKPEVEFQYGGCLFFET
Ga0209259_117112413300027658Marine Gutless Worms SymbiontANEMPMTTGVSKSKPEVEFQNGGRSFSKTGSSLNSAVD
Ga0209259_122967623300027658Marine Gutless Worms SymbiontMKFGMPTQNKMLMTIGGLKLKLEIEFQYDGRSFSETGSSYNSAAE
Ga0209259_123384023300027658Marine Gutless Worms SymbiontPTQNEMLMTTGRLKLKQVVEFQYGGRSFSKTGSSYNSAVE
Ga0209259_129575513300027658Marine Gutless Worms SymbiontLIHMKFGVPTQNEWLMPIGRLKLKPEVEFEYGGRSFCETGSSYNSAVE
Ga0209259_134330523300027658Marine Gutless Worms SymbiontMQNEMLMTMGRLKLKPEVEFQYDSRSFSETGSSYNSAVE
Ga0209259_135172013300027658Marine Gutless Worms SymbiontGHNYATDSPIHMKFGTPTQNEMLMTTGRLKSKPKVEFQYSGCSLSETGSSYNSAVE
Ga0209259_141274623300027658Marine Gutless Worms SymbiontMQNEMLMTADWSKLKPEVEFQYGGSSFSETGSSYNSAVD
Ga0209259_142309423300027658Marine Gutless Worms SymbiontMPMTVGRLKLKPEVEFQYGSRSLFETGSSYNSAMERYIFTK
Ga0209259_142727123300027658Marine Gutless Worms SymbiontVRFTRKFGMPMQNEMLMTTDRSKLKQEVEFQYGGRSFSETGSGYNSAVD
Ga0209259_148107413300027658Marine Gutless Worms SymbiontMKFGTPTQNETLMTIGRLKLKPEVEFQYGGRSFSETGSSYNSAVDXHIFTKF
Ga0209459_1002505313300027661Marine Gutless Worms SymbiontGLIHIKFAVPTQNEMLMTTGSGRLKSKPEVEFQNGDHSYSENGSSYNSATK
Ga0209459_1005626323300027661Marine Gutless Worms SymbiontMKFGVPTQNETLMTTGRSKLKPEVEFQYGGRSFSETGSSYNSAVD
Ga0209459_1010349213300027661Marine Gutless Worms SymbiontMVRFTQNLMQNEMLMNTDRSKSKPEVECQYGGRSFPESRSSYN
Ga0209459_1010637013300027661Marine Gutless Worms SymbiontANQTPMTTGVSKSKPEVEFQNGGRSFSKTGSSLNSAVD
Ga0209459_1026349813300027661Marine Gutless Worms SymbiontATDSPIHMKFGTPTQNEMLMTTGRLKSKPKVEFQYSGCSLSETGSSYNSAVE
Ga0209459_1027879923300027661Marine Gutless Worms SymbiontMIDIKFGTAMQNEMLMTIGRLKLKLEVEFQYGSRSFSETGSSYNSAAE
Ga0209459_1038384013300027661Marine Gutless Worms SymbiontMQNEMPMTTDMXKLKPEVEFQYGGRSFFETGSSYNSAADXGIFTKFGT


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