Metagenome Family F104475

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F104475
Family Type	Metagenome
Number of Sequences	100
Average Sequence Length	40 residues
Representative Sequence	MTLNGVMAVILRYFSEFGSFRGALRKVVEDIPKLSAKEM
Number of Associated Samples	15
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.63 %
% of genes near scaffold ends (potentially truncated)	5.00 %
% of genes from short scaffolds (< 2000 bps)	30.00 %
Associated GOLD sequencing projects	9
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (96.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont (93.000 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal proximal gut (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.73% β-sheet: 0.00% Coil/Unstructured: 46.27%
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Predicted 3D Structure

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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF02866	Ldh_1_C	1.00
PF00078	RVT_1	1.00
PF05699	Dimer_Tnp_hAT	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG0039	Malate/lactate dehydrogenase	Energy production and conversion [C]	1.00

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
All Organisms	root	All Organisms	4.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
cellular organisms	root	All Organisms → cellular organisms	4.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	4.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	4.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	2.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	2.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	2.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	2.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
Spiralia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia	2.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
Lophotrochozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa	2.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
Annelida	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida	2.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
Clitellata	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida → Clitellata	2.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
Hirudinea	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida → Clitellata → Hirudinea	2.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
Rhynchobdellida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida → Clitellata → Hirudinea → Rhynchobdellida	2.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
Glossiphoniidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida → Clitellata → Hirudinea → Rhynchobdellida → Glossiphoniidae	2.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
Helobdella	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida → Clitellata → Hirudinea → Rhynchobdellida → Glossiphoniidae → Helobdella	2.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
Helobdella robusta	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida → Clitellata → Hirudinea → Rhynchobdellida → Glossiphoniidae → Helobdella → Helobdella robusta	2.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003906\|JGI26667J51740_10049105	Not Available	948	Open in IMG/M
3300004630\|Ga0049105_1028979	All Organisms → cellular organisms → Eukaryota → Opisthokonta	3991	Open in IMG/M
3300005652\|Ga0056135_10005367	Not Available	4701	Open in IMG/M
3300005652\|Ga0056135_10062433	Not Available	2034	Open in IMG/M
3300005652\|Ga0056135_10112623	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida → Clitellata → Hirudinea → Rhynchobdellida → Glossiphoniidae → Helobdella → Helobdella robusta	1544	Open in IMG/M
3300005652\|Ga0056135_10141447	Not Available	1369	Open in IMG/M
3300005652\|Ga0056135_10328182	Not Available	803	Open in IMG/M
3300005652\|Ga0056135_10360673	Not Available	748	Open in IMG/M
3300005652\|Ga0056135_10574576	Not Available	504	Open in IMG/M
3300005653\|Ga0056133_10177367	Not Available	1281	Open in IMG/M
3300005653\|Ga0056133_10205696	Not Available	1168	Open in IMG/M
3300005653\|Ga0056133_10548753	Not Available	544	Open in IMG/M
3300005970\|Ga0056134_10008443	Not Available	2918	Open in IMG/M
3300005970\|Ga0056134_10049087	Not Available	1658	Open in IMG/M
3300005970\|Ga0056134_10186098	Not Available	928	Open in IMG/M
3300005970\|Ga0056134_10286386	Not Available	729	Open in IMG/M
3300005970\|Ga0056134_10408435	Not Available	578	Open in IMG/M
3300005970\|Ga0056134_10417554	Not Available	570	Open in IMG/M
3300008215\|Ga0056108_1006944	Not Available	5127	Open in IMG/M
3300008215\|Ga0056108_1010732	Not Available	4507	Open in IMG/M
3300008215\|Ga0056108_1059314	Not Available	2427	Open in IMG/M
3300008215\|Ga0056108_1088295	Not Available	2009	Open in IMG/M
3300008215\|Ga0056108_1098454	Not Available	1898	Open in IMG/M
3300008215\|Ga0056108_1213771	Not Available	1185	Open in IMG/M
3300008215\|Ga0056108_1350064	Not Available	801	Open in IMG/M
3300008215\|Ga0056108_1386158	Not Available	733	Open in IMG/M
3300008215\|Ga0056108_1421255	All Organisms → cellular organisms → Eukaryota → Opisthokonta	674	Open in IMG/M
3300008215\|Ga0056108_1453513	Not Available	627	Open in IMG/M
3300027550\|Ga0209255_1148877	Not Available	1229	Open in IMG/M
3300027624\|Ga0209789_10059571	Not Available	1396	Open in IMG/M
3300027624\|Ga0209789_10060713	Not Available	1385	Open in IMG/M
3300027624\|Ga0209789_10103000	Not Available	1101	Open in IMG/M
3300027624\|Ga0209789_10159051	Not Available	887	Open in IMG/M
3300027658\|Ga0209259_1182013	Not Available	1174	Open in IMG/M
3300027658\|Ga0209259_1301856	Not Available	797	Open in IMG/M
3300027658\|Ga0209259_1478380	Not Available	504	Open in IMG/M
3300027661\|Ga0209459_10170351	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida → Clitellata → Hirudinea → Rhynchobdellida → Glossiphoniidae → Helobdella → Helobdella robusta	1134	Open in IMG/M
3300027661\|Ga0209459_10196389	Not Available	1035	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Annelida	Host-Associated → Annelida	100.00%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Annelida → Digestive System	100.00%

Habitat	Taxonomy	Distribution
Digestive Tube	Host-Associated → Annelida → Digestive System → Digestive Tube	93.00%
Unclassified	Host-Associated → Annelida → Digestive System → Unclassified	7.00%

Habitat	Taxonomy	Distribution
Extracellular Symbionts	Host-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts	93.00%
Unclassified	Host-Associated → Annelida → Digestive System → Unclassified → Unclassified	7.00%

Habitat	Taxonomy	Distribution
Marine Gutless Worms Symbiont	Host-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont	93.00%
Marine Gutless Worms Symbiont	Host-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms Symbiont	7.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003786	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius vacuus BELIZE.2	Host-Associated	Open in IMG/M
3300003906	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius vacuus BAHAMAS.2	Host-Associated	Open in IMG/M
3300004630	Worm MetaG Olavius vacuus BAHAMAS.1	Host-Associated	Open in IMG/M
3300005652	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1a BELIZE.1	Host-Associated	Open in IMG/M
3300005653	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.1	Host-Associated	Open in IMG/M
3300005970	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.2	Host-Associated	Open in IMG/M
3300007818	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1 BERMUDA.2	Host-Associated	Open in IMG/M
3300008215	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1 BERMUDA.1	Host-Associated	Open in IMG/M
3300027001	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1a BELIZE.2 (SPAdes)	Host-Associated	Open in IMG/M
3300027044	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1 BERMUDA.2 (SPAdes)	Host-Associated	Open in IMG/M
3300027519	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius vacuus BELIZE.2 (SPAdes)	Host-Associated	Open in IMG/M
3300027550	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius vacuus BAHAMAS.2 (SPAdes)	Host-Associated	Open in IMG/M
3300027624	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.2 (SPAdes)	Host-Associated	Open in IMG/M
3300027658	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.1 (SPAdes)	Host-Associated	Open in IMG/M
3300027661	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1a BELIZE.1 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0049116_100085842	3300003786	Marine Gutless Worms Symbiont	MTLNGAVAFILRYFTEFGNFGVDNVKVVENRPIMSATKK*
JGI26667J51740_100491051	3300003906	Marine Gutless Worms Symbiont	MTSNGVMALILHYFTKFGSFWGTLHKSGEDIPKLSATEM*
Ga0049105_10289797	3300004630	Marine Gutless Worms Symbiont	MTLNGAIALILRDFTEFGSFRGALRKVVEDIPKLSATEM*
Ga0049105_11045262	3300004630	Marine Gutless Worms Symbiont	MTLSGVMAVILCYFTELNSFWAHYVKVVEDTCILSATEMKPKDVVFN
Ga0049105_12282572	3300004630	Marine Gutless Worms Symbiont	MTLNGVVAFILRYFTEFGAFGANYVKVVEDRPSLSVTKM*
Ga0056135_100053676	3300005652	Marine Gutless Worms Symbiont	MNDMNSVMAVSLRYFSEFGSFRGALRKVVEDVPKFSATEM*
Ga0056135_100204783	3300005652	Marine Gutless Worms Symbiont	MTLNGVMAVILCYFSEIGTFGAYCVKVVDDIRKLSPTEM*
Ga0056135_100211624	3300005652	Marine Gutless Worms Symbiont	MTLNGIMAVILCYFSKLGSFGRALRKLVEDLPKLSATEM*
Ga0056135_100395752	3300005652	Marine Gutless Worms Symbiont	MTLNGVMAVILCYFSKVGSFGRALRKVVEDIPKLSDGNVAHSF*
Ga0056135_100434072	3300005652	Marine Gutless Worms Symbiont	MAFNGVMVVILCYFSKLGSFGRPLRKVVEDVLKFSATEM*
Ga0056135_100469163	3300005652	Marine Gutless Worms Symbiont	MTLNGVMAVILCYYSKLCSFGRALRKVVEDIPVPKLSATEM*
Ga0056135_100522182	3300005652	Marine Gutless Worms Symbiont	MTLNGVMAAILRYFNEFDSIWSARVKVVEDIRKLSMTEM*
Ga0056135_100624335	3300005652	Marine Gutless Worms Symbiont	MTLNSVMVVILRYFIDIDSFRGALRKVVEDIPKLST
Ga0056135_100633783	3300005652	Marine Gutless Worms Symbiont	MTLNGVMAVIFCYFSKLDRFGHALLKVVEDIPKLYAMEM*
Ga0056135_100797111	3300005652	Marine Gutless Worms Symbiont	MTLTGVISFILRYFSEFGSFRGALSVKVFEDMPKLCATEI*
Ga0056135_101007574	3300005652	Marine Gutless Worms Symbiont	MTLNGVMAVILCYFSKLGSFGRALRKVVEDIPKLSVTEM*
Ga0056135_101126233	3300005652	Marine Gutless Worms Symbiont	MTLNGVMAVILRYFTEFGNFRGALRKVVEDIPKLSATGM*
Ga0056135_101171692	3300005652	Marine Gutless Worms Symbiont	MTLNGVMAVILRYFSEFRSLWSALHKMVEDILKLSATEM*
Ga0056135_101414473	3300005652	Marine Gutless Worms Symbiont	MTLNGEVAVILRYFSEIGSIRGALRKVVEDIPKLSATEV*
Ga0056135_101588362	3300005652	Marine Gutless Worms Symbiont	MTLNGVMAVILCYFSKLGSFGHTLRKVVEDMPKLSATEM*
Ga0056135_101722572	3300005652	Marine Gutless Worms Symbiont	MTLNGVVAVILRYFSEIGSIAFGAHCVKVVEDIPKLSAIEM*
Ga0056135_102035813	3300005652	Marine Gutless Worms Symbiont	MTLNGVMAVTLRYFSEFGSFWGALRKRVEDIPKLSAIGM*
Ga0056135_103281821	3300005652	Marine Gutless Worms Symbiont	MTMNGVVAVILRYFSEIGSIRGALRKSVEDIAKHSTIEM*
Ga0056135_103594882	3300005652	Marine Gutless Worms Symbiont	MTLNGVVAVILRYFSEIGTFGAYCVKVVEDIPKLSATEM*
Ga0056135_103606731	3300005652	Marine Gutless Worms Symbiont	MTLNGVVAVILRYFSEIGSIRGTLRKVVEDIPKLSATEI*
Ga0056135_104031261	3300005652	Marine Gutless Worms Symbiont	MTLNGVMAVILCYFSKLGSFGHALRKVVEEIPKLSATEM*
Ga0056135_104617132	3300005652	Marine Gutless Worms Symbiont	MTVNGVMAAILCYFSKLGSFGRALRKVVEDIPKLSAT
Ga0056135_105745761	3300005652	Marine Gutless Worms Symbiont	MTLNGVMALIPRYFTEFGSFRGALRKSGVEDILKLSATGM*
Ga0056133_100008331	3300005653	Marine Gutless Worms Symbiont	MTLNGVMAVIVCYFSKLGSLGRALRNVVKDIPKLSATEM*
Ga0056133_100511615	3300005653	Marine Gutless Worms Symbiont	MTVNGVMAAILCYFSKLGSFGRALRKVVEDIPKLSATEM*
Ga0056133_100695133	3300005653	Marine Gutless Worms Symbiont	MTLNGVVAVILRYFSEIGSIRWALRKVVADIPKISATEM*
Ga0056133_100754903	3300005653	Marine Gutless Worms Symbiont	MALNGVMAVILCYFIKLGSFGRALRNVVEDIPKLSATAMQRKVSRF*
Ga0056133_100767513	3300005653	Marine Gutless Worms Symbiont	MTLNGVMAVFMRYFSDFGSFSAHCVKVVEDMPKLSATEI*
Ga0056133_101229522	3300005653	Marine Gutless Worms Symbiont	MTLNGVMAVILCYFSKLGSFGRALPKVVEDIPKLSATEM*
Ga0056133_101773673	3300005653	Marine Gutless Worms Symbiont	MTLNGTMAVILRYFSEFDSFRGALRKVVEDIPKLST
Ga0056133_102044093	3300005653	Marine Gutless Worms Symbiont	MTLNGVVAVILRYFSEIGSIWGALRINVVEDIPKLSATEM*
Ga0056133_102056961	3300005653	Marine Gutless Worms Symbiont	MTLNSVVAVILRYFSEIGSIRGALRKVVEDIPKLSA
Ga0056133_102766461	3300005653	Marine Gutless Worms Symbiont	MTLNGVMAVILCYFSKLGSFGRTLRKVLEDIPKLSATEI*
Ga0056133_103212943	3300005653	Marine Gutless Worms Symbiont	MTLNGVMAVIFCYFSKLDRFGRALRKVVEDIPKLYAMEM*
Ga0056133_105273522	3300005653	Marine Gutless Worms Symbiont	MTLNGMIGILAVILRYFSKFDSSGRALRKVVEVEDIPKLSATEI*
Ga0056133_105487531	3300005653	Marine Gutless Worms Symbiont	MALNGVAAVIWRYFSEIGSIWCALRKVVEDIPKLSAAGT*
Ga0056133_105990922	3300005653	Marine Gutless Worms Symbiont	MTLNGVIPVILCYFSKLGSFVRALRKVVEDIPNLSATEM*
Ga0056134_100084433	3300005970	Marine Gutless Worms Symbiont	VTLNGVMAIILQYFSEYGSFWGALRKVVEDIPKLSATEMYLKAFSF*
Ga0056134_100171203	3300005970	Marine Gutless Worms Symbiont	MTLNGVVAVILCYFSEIGSFRPHCIKVVEDMPKLSATEM*
Ga0056134_100490873	3300005970	Marine Gutless Worms Symbiont	MTLNGAVAVILRYFSDIGRIQGALRKVVEDIPKLSATEMYFKASTF*
Ga0056134_100998743	3300005970	Marine Gutless Worms Symbiont	MTLNGVVAVILRYFSEIGSVVFGAHCVKVVEDIPKLSATEM*
Ga0056134_101138014	3300005970	Marine Gutless Worms Symbiont	MTLNGVMAVIVCYFSKLGSLTRALRNVVKDIPKLSATEM*
Ga0056134_101810852	3300005970	Marine Gutless Worms Symbiont	MTLNGVMAVILRYFSKLGSFRAHYIKVVKDIPKFSAIEM*
Ga0056134_101860982	3300005970	Marine Gutless Worms Symbiont	MTLNGTMAVVLRYFSEFESFRGALRKVVEDIPKLSTTEM
Ga0056134_102863861	3300005970	Marine Gutless Worms Symbiont	MTLNGVMVVILRYLSKIRSIRGALRKVVEDIPKLSATEINVVQSF*
Ga0056134_104084351	3300005970	Marine Gutless Worms Symbiont	VMAFILRYFTEFGNFRGALRKVVEDIPKLSATGM*
Ga0056134_104175541	3300005970	Marine Gutless Worms Symbiont	MTLNGVMVVILLCFSEFGSFRGALRKVVEDIPKLSAATEM*
Ga0056109_10359511	3300007818	Marine Gutless Worms Symbiont	MTLNGVMAVILCYFSKLGSFGRALRKVVEDIPKLSATEM*
Ga0056109_10956851	3300007818	Marine Gutless Worms Symbiont	MTLNGVVAVILRYFSEIGGIRAQCVKVVEDIPKLSATEM*
Ga0056108_10069444	3300008215	Marine Gutless Worms Symbiont	MTLNGVVAVILRYFCEIGSLRGALRKVVEDIPKLSATGLYLNASSF*
Ga0056108_10107323	3300008215	Marine Gutless Worms Symbiont	MIFNGVVAVILRYFSEIGSIRGALVLKMVEDIPKLSATEM*
Ga0056108_10409032	3300008215	Marine Gutless Worms Symbiont	LNGVMAVILCYFSKLGSFGRALRKVVEDIPKLSATEM*
Ga0056108_10593143	3300008215	Marine Gutless Worms Symbiont	MTLNGVMAVILRYFSEFDSIRGALSIKVVEDIPKLSATEMYSF*
Ga0056108_10882953	3300008215	Marine Gutless Worms Symbiont	MTSNGVMAVILRYFTEFGNFRGALRKSVEDIPKLSATGM*
Ga0056108_10984542	3300008215	Marine Gutless Worms Symbiont	MTLNGVMAVILRYFSEIGSLRGVLRKVVEDIPKLSATEM*
Ga0056108_11249852	3300008215	Marine Gutless Worms Symbiont	MALNGVAAVIWRYFSEIGSIWCALRKVVEDIPKLSAIKNVGQSF*
Ga0056108_11733082	3300008215	Marine Gutless Worms Symbiont	MTLNGVMAVILRYFSEFRSLWSALRKMVEDILKLSATEM*
Ga0056108_11815611	3300008215	Marine Gutless Worms Symbiont	MTFNGVMAVIFSYFSKLDRFGRALRKVVEDIPKLYTMEM*
Ga0056108_12137711	3300008215	Marine Gutless Worms Symbiont	MTLNGTMAVILRYFSEFNSFRGALRKVVEDIPKLSTTEM*
Ga0056108_12311791	3300008215	Marine Gutless Worms Symbiont	MTLTGVISFILRYFSEFGNFRGALSVKVFEDMPKLCATEI*
Ga0056108_12801262	3300008215	Marine Gutless Worms Symbiont	MTLNGILLAVILRYFSKLDSSGRALRKVVEVEDIPKLSTTEI*
Ga0056108_13500641	3300008215	Marine Gutless Worms Symbiont	MSLNGVVAVILRYFSEIGSIRGALRKVVEDIPNVSATEM*
Ga0056108_13577201	3300008215	Marine Gutless Worms Symbiont	MTLNGVVAVILRYFSEIGSIRGALRKVVEYIPKMSATEMYSKDPSF*
Ga0056108_13861582	3300008215	Marine Gutless Worms Symbiont	MTLNGVMALILRYFTEFASFRGALRKVVEDIPKLSATEM*
Ga0056108_14212552	3300008215	Marine Gutless Worms Symbiont	MTLNGVMALILRYFTEFGSFPGALRKVVEDIPKLSAAEM*
Ga0056108_14535131	3300008215	Marine Gutless Worms Symbiont	MTLNGVMVVILRYFSEFGNFRGALRHCVKVVEDIPKLSATEM*
Ga0209790_10251092	3300027001	Marine Gutless Worms Symbiont	MTLNGVMAVTLRYFSEFGSFWGALRKRVEDIPKLSAIGM
Ga0209785_10164592	3300027044	Marine Gutless Worms Symbiont	MTLNGVMAVILRYFSEFRSLWSALRKMVEDILKLSATEM
Ga0209785_10396281	3300027044	Marine Gutless Worms Symbiont	MTLNGVMAVILCYFSKLGSFGRALRKVVEDIPKLSATEM
Ga0209562_11063691	3300027519	Marine Gutless Worms Symbiont	MTLNGAVAFILRYFTEFGNFGVDNVKVVENRPIMSATKK
Ga0209255_11488771	3300027550	Marine Gutless Worms Symbiont	MTLNSVMTVTMRYFSEFGSFPGALCKVDEDTPTLSVAEM
Ga0209789_100106012	3300027624	Marine Gutless Worms Symbiont	MTLNGVMAVILCYFSKLGSFGHTLRKVVEDMPKLSATEM
Ga0209789_100595711	3300027624	Marine Gutless Worms Symbiont	MTLNGTMAVILRYFTEFASFRGALRKMVENIPKRSATAM
Ga0209789_100607132	3300027624	Marine Gutless Worms Symbiont	MTLNGVMAFILRYFTEFGNFRGALRKVVEDIPKLSATGM
Ga0209789_100767413	3300027624	Marine Gutless Worms Symbiont	MTLNGVVAVILRYFNEIGTFGAHYVKVVEDIPKLSTTEM
Ga0209789_101030002	3300027624	Marine Gutless Worms Symbiont	MALNGVAAVIWRYFSEIGSIWCALRKVVEDIPKLSAAGT
Ga0209789_101142621	3300027624	Marine Gutless Worms Symbiont	TLNGVMAVILRYFSEFRSLWSALHKMVEDILKLSATEM
Ga0209789_101241611	3300027624	Marine Gutless Worms Symbiont	MTLNGVMAVILCYFSKVGSFGRALRKVVEDIPKLSDGNVAHSF
Ga0209789_101590511	3300027624	Marine Gutless Worms Symbiont	MTLNGVMVVILLCFSEFGSFRGALRKVVEDIPKLSAATEM
Ga0209259_11212051	3300027658	Marine Gutless Worms Symbiont	MALNGVMAVILCYFIKLGSFGRALRNVVEDIPKLSATAMQRKVSRF
Ga0209259_11373721	3300027658	Marine Gutless Worms Symbiont	MTLNGVVAVILRYFSEIGSIAFGAHCVKVVEDIPKLSAIEM
Ga0209259_11820132	3300027658	Marine Gutless Worms Symbiont	MTLNGVMALIPRYFTEFGSFRGALRKSGVEDILKLSATGM
Ga0209259_12933861	3300027658	Marine Gutless Worms Symbiont	MTLNGVVAVILRYFSEIGSIWGALRINVVEDIPKLSATEM
Ga0209259_13018562	3300027658	Marine Gutless Worms Symbiont	MTLNGVVAVILRYFSEIGSIRGTLRKVVEDIPKLSATEI
Ga0209259_13372911	3300027658	Marine Gutless Worms Symbiont	MTLNGMIGILAVILRYFSKFDSSGRALRKVVEVEDIPKLSATEI
Ga0209259_14379531	3300027658	Marine Gutless Worms Symbiont	PSITLNGVMTVILCYFSKLGSFGRALRKVVEDIPKLSATKM
Ga0209259_14783801	3300027658	Marine Gutless Worms Symbiont	MTLNGTMAVILRYFNEFDSFRGALRKVVEDIPKLSATEM
Ga0209459_100174432	3300027661	Marine Gutless Worms Symbiont	MTLNGVMAVILCYFSEIGTFGAYCVKVVDDIRKLSPTEM
Ga0209459_100402811	3300027661	Marine Gutless Worms Symbiont	MTSNGVMAVILCYFSEYGSLRAHCVKVVEGISLRKLSATGL
Ga0209459_100445642	3300027661	Marine Gutless Worms Symbiont	MTLNGVMAVILCYYSKLCSFGRALRKVVEDIPVPKLSATEM
Ga0209459_100462851	3300027661	Marine Gutless Worms Symbiont	MTLNGVVAVILRYFSEIGSIAFGAHCVKVVEDIRK
Ga0209459_101302662	3300027661	Marine Gutless Worms Symbiont	MTVNGVMAAILCYFSKLGSFGRALRKVVEDIPKLSATEM
Ga0209459_101703512	3300027661	Marine Gutless Worms Symbiont	MTLNGVMAVILRYFTEFGNFRGALRKVVEDIPKLSATGM
Ga0209459_101963891	3300027661	Marine Gutless Worms Symbiont	MTLNGVMAVILRYFSEFGSFRGALRKVVEDIPKLSAKEM
Ga0209459_103756261	3300027661	Marine Gutless Worms Symbiont	MTLIGVMAVILRYLSDFGSFQRELRKSGFVEDIHKLSATEM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F104475

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences