 |
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F104564 |
| Family Type | Metagenome |
| Number of Sequences | 100 |
| Average Sequence Length | 47 residues |
| Representative Sequence | GDTENMREAFIKIQDVIEAIERAVWHERYIADPKSEPFSPFGFGS |
| Number of Associated Samples | 68 |
| Number of Associated Scaffolds | 100 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 9.00 % |
| % of genes near scaffold ends (potentially truncated) | 90.00 % |
| % of genes from short scaffolds (< 2000 bps) | 87.00 % |
| Associated GOLD sequencing projects | 61 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (61.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.000 % of family members) |
| Environment Ontology (ENVO) | Unclassified (62.000 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (53.000 % of family members) |
| ⦗Top⦘ |
| ⦗Top⦘ |
| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 60.00% β-sheet: 0.00% Coil/Unstructured: 40.00% | Feature Viewer |
|
|
|||||
| Powered by Feature Viewer | |||||
| ⦗Top⦘ |
| Pfam ID | Name | % Frequency in 100 Family Scaffolds |
|---|---|---|
| PF03401 | TctC | 4.00 |
| PF11953 | DUF3470 | 4.00 |
| PF00487 | FA_desaturase | 3.00 |
| PF02685 | Glucokinase | 3.00 |
| PF13356 | Arm-DNA-bind_3 | 2.00 |
| PF01315 | Ald_Xan_dh_C | 2.00 |
| PF02195 | ParBc | 2.00 |
| PF04392 | ABC_sub_bind | 1.00 |
| PF06577 | EipA | 1.00 |
| PF00982 | Glyco_transf_20 | 1.00 |
| PF09926 | DUF2158 | 1.00 |
| PF07369 | DUF1488 | 1.00 |
| PF13439 | Glyco_transf_4 | 1.00 |
| PF00005 | ABC_tran | 1.00 |
| PF05694 | SBP56 | 1.00 |
| PF09361 | Phasin_2 | 1.00 |
| COG ID | Name | Functional Category | % Frequency in 100 Family Scaffolds |
|---|---|---|---|
| COG3181 | Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC | Energy production and conversion [C] | 4.00 |
| COG0837 | Glucokinase | Carbohydrate transport and metabolism [G] | 3.00 |
| COG1398 | Fatty-acid desaturase | Lipid transport and metabolism [I] | 3.00 |
| COG3239 | Fatty acid desaturase | Lipid transport and metabolism [I] | 3.00 |
| COG0380 | Trehalose-6-phosphate synthase, GT20 family | Carbohydrate transport and metabolism [G] | 1.00 |
| COG2984 | ABC-type uncharacterized transport system, periplasmic component | General function prediction only [R] | 1.00 |
| ⦗Top⦘ |
| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 61.00 % |
| All Organisms | root | All Organisms | 39.00 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300005566|Ga0066693_10075879 | Not Available | 1174 | Open in IMG/M |
| 3300005764|Ga0066903_102302999 | All Organisms → cellular organisms → Bacteria | 1040 | Open in IMG/M |
| 3300006041|Ga0075023_100546390 | Not Available | 529 | Open in IMG/M |
| 3300006052|Ga0075029_100695153 | Not Available | 686 | Open in IMG/M |
| 3300006057|Ga0075026_100023447 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2765 | Open in IMG/M |
| 3300006057|Ga0075026_100560874 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12 | 666 | Open in IMG/M |
| 3300006954|Ga0079219_10110837 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 1373 | Open in IMG/M |
| 3300009137|Ga0066709_103762261 | Not Available | 551 | Open in IMG/M |
| 3300010048|Ga0126373_12022572 | Not Available | 638 | Open in IMG/M |
| 3300010048|Ga0126373_12262454 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 604 | Open in IMG/M |
| 3300010361|Ga0126378_10302385 | Not Available | 1703 | Open in IMG/M |
| 3300010361|Ga0126378_10962436 | Not Available | 958 | Open in IMG/M |
| 3300010366|Ga0126379_11512499 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 777 | Open in IMG/M |
| 3300012206|Ga0137380_10040907 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 4273 | Open in IMG/M |
| 3300012207|Ga0137381_10027383 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 4573 | Open in IMG/M |
| 3300012209|Ga0137379_10029452 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 5285 | Open in IMG/M |
| 3300012210|Ga0137378_10033664 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 4553 | Open in IMG/M |
| 3300012211|Ga0137377_11123001 | Not Available | 716 | Open in IMG/M |
| 3300012356|Ga0137371_10718884 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 763 | Open in IMG/M |
| 3300016270|Ga0182036_10645771 | Not Available | 852 | Open in IMG/M |
| 3300016270|Ga0182036_10932480 | Not Available | 713 | Open in IMG/M |
| 3300016270|Ga0182036_11049861 | Not Available | 673 | Open in IMG/M |
| 3300016270|Ga0182036_11207645 | Not Available | 629 | Open in IMG/M |
| 3300016319|Ga0182033_10483472 | Not Available | 1061 | Open in IMG/M |
| 3300016319|Ga0182033_10497928 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1046 | Open in IMG/M |
| 3300016357|Ga0182032_11310808 | Not Available | 625 | Open in IMG/M |
| 3300016371|Ga0182034_10362001 | Not Available | 1180 | Open in IMG/M |
| 3300016371|Ga0182034_10928148 | Not Available | 750 | Open in IMG/M |
| 3300016371|Ga0182034_11316391 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 630 | Open in IMG/M |
| 3300016371|Ga0182034_11585701 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis | 575 | Open in IMG/M |
| 3300016371|Ga0182034_11586553 | Not Available | 574 | Open in IMG/M |
| 3300016387|Ga0182040_11359347 | Not Available | 601 | Open in IMG/M |
| 3300016387|Ga0182040_11558671 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 562 | Open in IMG/M |
| 3300016422|Ga0182039_10759436 | Not Available | 858 | Open in IMG/M |
| 3300016445|Ga0182038_10603661 | Not Available | 948 | Open in IMG/M |
| 3300017937|Ga0187809_10273462 | Not Available | 616 | Open in IMG/M |
| 3300017970|Ga0187783_10745541 | Not Available | 707 | Open in IMG/M |
| 3300017994|Ga0187822_10172049 | Not Available | 708 | Open in IMG/M |
| 3300018006|Ga0187804_10228839 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12 | 799 | Open in IMG/M |
| 3300018468|Ga0066662_12408334 | Not Available | 554 | Open in IMG/M |
| 3300018482|Ga0066669_11480578 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 616 | Open in IMG/M |
| 3300019888|Ga0193751_1099347 | Not Available | 1123 | Open in IMG/M |
| 3300021168|Ga0210406_10397364 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1105 | Open in IMG/M |
| 3300021560|Ga0126371_13876423 | Not Available | 504 | Open in IMG/M |
| 3300026552|Ga0209577_10086227 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium | 2572 | Open in IMG/M |
| 3300026927|Ga0207744_1021868 | Not Available | 597 | Open in IMG/M |
| 3300027910|Ga0209583_10102114 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1107 | Open in IMG/M |
| 3300027911|Ga0209698_10416178 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1049 | Open in IMG/M |
| 3300031057|Ga0170834_103093481 | Not Available | 504 | Open in IMG/M |
| 3300031128|Ga0170823_14194581 | Not Available | 1029 | Open in IMG/M |
| 3300031231|Ga0170824_102143543 | Not Available | 939 | Open in IMG/M |
| 3300031231|Ga0170824_116816298 | All Organisms → cellular organisms → Bacteria | 2270 | Open in IMG/M |
| 3300031544|Ga0318534_10138970 | Not Available | 1400 | Open in IMG/M |
| 3300031545|Ga0318541_10054541 | All Organisms → cellular organisms → Bacteria | 2061 | Open in IMG/M |
| 3300031546|Ga0318538_10736588 | Not Available | 535 | Open in IMG/M |
| 3300031573|Ga0310915_11241963 | Not Available | 514 | Open in IMG/M |
| 3300031640|Ga0318555_10323228 | All Organisms → cellular organisms → Bacteria | 835 | Open in IMG/M |
| 3300031679|Ga0318561_10553134 | Not Available | 634 | Open in IMG/M |
| 3300031718|Ga0307474_10960730 | Not Available | 676 | Open in IMG/M |
| 3300031736|Ga0318501_10872683 | Not Available | 500 | Open in IMG/M |
| 3300031744|Ga0306918_10325166 | Not Available | 1189 | Open in IMG/M |
| 3300031781|Ga0318547_10116163 | Not Available | 1546 | Open in IMG/M |
| 3300031781|Ga0318547_10512517 | Not Available | 741 | Open in IMG/M |
| 3300031819|Ga0318568_10791227 | Not Available | 588 | Open in IMG/M |
| 3300031833|Ga0310917_10646521 | Not Available | 717 | Open in IMG/M |
| 3300031845|Ga0318511_10419145 | Not Available | 615 | Open in IMG/M |
| 3300031879|Ga0306919_10053906 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 2675 | Open in IMG/M |
| 3300031879|Ga0306919_10648264 | Not Available | 814 | Open in IMG/M |
| 3300031890|Ga0306925_10092740 | Not Available | 3208 | Open in IMG/M |
| 3300031890|Ga0306925_10761063 | Not Available | 1008 | Open in IMG/M |
| 3300031890|Ga0306925_11158569 | Not Available | 777 | Open in IMG/M |
| 3300031897|Ga0318520_10833514 | Not Available | 579 | Open in IMG/M |
| 3300031912|Ga0306921_10115753 | Not Available | 3119 | Open in IMG/M |
| 3300031912|Ga0306921_10428156 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1543 | Open in IMG/M |
| 3300031912|Ga0306921_11514782 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium | 732 | Open in IMG/M |
| 3300031912|Ga0306921_12272639 | Not Available | 569 | Open in IMG/M |
| 3300031941|Ga0310912_10961205 | Not Available | 656 | Open in IMG/M |
| 3300031942|Ga0310916_10047216 | Not Available | 3272 | Open in IMG/M |
| 3300031942|Ga0310916_10775487 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12 | 808 | Open in IMG/M |
| 3300031945|Ga0310913_10377721 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium | 1004 | Open in IMG/M |
| 3300031945|Ga0310913_10613394 | Not Available | 771 | Open in IMG/M |
| 3300031945|Ga0310913_10884152 | Not Available | 628 | Open in IMG/M |
| 3300031946|Ga0310910_11255389 | Not Available | 573 | Open in IMG/M |
| 3300031947|Ga0310909_11530482 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 530 | Open in IMG/M |
| 3300031947|Ga0310909_11689685 | Not Available | 500 | Open in IMG/M |
| 3300031954|Ga0306926_10697959 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis | 1231 | Open in IMG/M |
| 3300031954|Ga0306926_10716253 | All Organisms → cellular organisms → Bacteria | 1213 | Open in IMG/M |
| 3300032001|Ga0306922_10773625 | Not Available | 1005 | Open in IMG/M |
| 3300032001|Ga0306922_10855102 | Not Available | 948 | Open in IMG/M |
| 3300032001|Ga0306922_11185003 | Not Available | 778 | Open in IMG/M |
| 3300032035|Ga0310911_10204800 | Not Available | 1123 | Open in IMG/M |
| 3300032076|Ga0306924_10229885 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 2130 | Open in IMG/M |
| 3300032076|Ga0306924_10609486 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 1234 | Open in IMG/M |
| 3300032076|Ga0306924_10656599 | All Organisms → cellular organisms → Bacteria | 1182 | Open in IMG/M |
| 3300032076|Ga0306924_11908745 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 615 | Open in IMG/M |
| 3300032180|Ga0307471_100888255 | Not Available | 1058 | Open in IMG/M |
| 3300032261|Ga0306920_100629885 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1585 | Open in IMG/M |
| 3300032261|Ga0306920_104350473 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 508 | Open in IMG/M |
| 3300033290|Ga0318519_10182972 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12 | 1188 | Open in IMG/M |
| 3300033290|Ga0318519_10394668 | Not Available | 823 | Open in IMG/M |
| ⦗Top⦘ |
| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 37.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 26.00% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 6.00% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 6.00% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 6.00% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 4.00% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 3.00% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 3.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 2.00% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.00% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 2.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.00% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 1.00% |
| Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 1.00% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300005566 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 | Environmental | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300006041 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 | Environmental | Open in IMG/M |
| 3300006052 | Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013 | Environmental | Open in IMG/M |
| 3300006057 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012 | Environmental | Open in IMG/M |
| 3300006954 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control | Environmental | Open in IMG/M |
| 3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
| 3300010048 | Tropical forest soil microbial communities from Panama - MetaG Plot_11 | Environmental | Open in IMG/M |
| 3300010361 | Tropical forest soil microbial communities from Panama - MetaG Plot_23 | Environmental | Open in IMG/M |
| 3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
| 3300012206 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG | Environmental | Open in IMG/M |
| 3300012207 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG | Environmental | Open in IMG/M |
| 3300012209 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG | Environmental | Open in IMG/M |
| 3300012210 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG | Environmental | Open in IMG/M |
| 3300012211 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG | Environmental | Open in IMG/M |
| 3300012356 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG | Environmental | Open in IMG/M |
| 3300016270 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 | Environmental | Open in IMG/M |
| 3300016319 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H | Environmental | Open in IMG/M |
| 3300016357 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 | Environmental | Open in IMG/M |
| 3300016371 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 | Environmental | Open in IMG/M |
| 3300016387 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 | Environmental | Open in IMG/M |
| 3300016422 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 | Environmental | Open in IMG/M |
| 3300016445 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 | Environmental | Open in IMG/M |
| 3300017937 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4 | Environmental | Open in IMG/M |
| 3300017970 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG | Environmental | Open in IMG/M |
| 3300017994 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2 | Environmental | Open in IMG/M |
| 3300018006 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4 | Environmental | Open in IMG/M |
| 3300018468 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111 | Environmental | Open in IMG/M |
| 3300018482 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118 | Environmental | Open in IMG/M |
| 3300019888 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2 | Environmental | Open in IMG/M |
| 3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
| 3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
| 3300026552 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes) | Environmental | Open in IMG/M |
| 3300026927 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 56 (SPAdes) | Environmental | Open in IMG/M |
| 3300027910 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes) | Environmental | Open in IMG/M |
| 3300027911 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes) | Environmental | Open in IMG/M |
| 3300031057 | Oak Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031128 | Oak Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031544 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26 | Environmental | Open in IMG/M |
| 3300031545 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26 | Environmental | Open in IMG/M |
| 3300031546 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23 | Environmental | Open in IMG/M |
| 3300031573 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111 | Environmental | Open in IMG/M |
| 3300031640 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23 | Environmental | Open in IMG/M |
| 3300031679 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23 | Environmental | Open in IMG/M |
| 3300031718 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 | Environmental | Open in IMG/M |
| 3300031736 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21 | Environmental | Open in IMG/M |
| 3300031744 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2) | Environmental | Open in IMG/M |
| 3300031781 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20 | Environmental | Open in IMG/M |
| 3300031819 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21 | Environmental | Open in IMG/M |
| 3300031833 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178 | Environmental | Open in IMG/M |
| 3300031845 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18 | Environmental | Open in IMG/M |
| 3300031879 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2) | Environmental | Open in IMG/M |
| 3300031890 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2) | Environmental | Open in IMG/M |
| 3300031897 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16 | Environmental | Open in IMG/M |
| 3300031912 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2) | Environmental | Open in IMG/M |
| 3300031941 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080 | Environmental | Open in IMG/M |
| 3300031942 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176 | Environmental | Open in IMG/M |
| 3300031945 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082 | Environmental | Open in IMG/M |
| 3300031946 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172 | Environmental | Open in IMG/M |
| 3300031947 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H | Environmental | Open in IMG/M |
| 3300031954 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2) | Environmental | Open in IMG/M |
| 3300032001 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2) | Environmental | Open in IMG/M |
| 3300032035 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170 | Environmental | Open in IMG/M |
| 3300032076 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2) | Environmental | Open in IMG/M |
| 3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
| 3300032261 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2) | Environmental | Open in IMG/M |
| 3300033290 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| Ga0066693_100758792 | 3300005566 | Soil | FIKIQDVIEAIERAVWHERYIADPKSEPFSPFGFRSAP* |
| Ga0066903_1023029991 | 3300005764 | Tropical Forest Soil | KHNRGDTENMREAFIKIQDVIEAIERAVWHERYIVDPKSEPFSPFGFRS* |
| Ga0075023_1005463902 | 3300006041 | Watersheds | NIREAFIKIQDVIEAIERAVWHEKYIADPKSEPFSPFGFRSAP* |
| Ga0075029_1006951532 | 3300006052 | Watersheds | FIKIQDVIEAIERAIWHERYIADPKSEPFSPFGFKS* |
| Ga0075026_1000234473 | 3300006057 | Watersheds | MRETFIKIQDAIEAIERAVWHERYIAGQKSDPFSPFGFGS* |
| Ga0075026_1005608742 | 3300006057 | Watersheds | IKIQDVIEAIERAVWHERYIANPKSEPFSPFGFTS* |
| Ga0079219_101108371 | 3300006954 | Agricultural Soil | PQVARRRDLVQRLTEKYDRGDAENMREAFIKIQDAIEAIERAVRHERYISGQKSVFSPFGFGS* |
| Ga0066709_1037622612 | 3300009137 | Grasslands Soil | AENYHRGDTENMREAFIQIQETSEAIGRAVWHERFIAGQKYEPFSPVGFGS* |
| Ga0126373_120225722 | 3300010048 | Tropical Forest Soil | VTHRRDIAEALAEKHNHGDTENMREAFIKTQDVIEAIERAVWHERYIVDPKCEPFSPFGFRS* |
| Ga0126373_122624542 | 3300010048 | Tropical Forest Soil | AEKHNRGDTENMREAFIKIQDVIEAIERAVWHERYIADPKSDSFSPFGFRS* |
| Ga0126378_103023855 | 3300010361 | Tropical Forest Soil | EKHNRGDTENMREAFIRIQDVIEAIERAVWHERYIGDPKSEPFSPFGFRS* |
| Ga0126378_109624363 | 3300010361 | Tropical Forest Soil | EAFIKTQDVIEAIERAVWHERYIVDPKSEPFSPFGFRS* |
| Ga0126379_115124992 | 3300010366 | Tropical Forest Soil | ALAEKHNRGDTENMREAFIKIQDVIEAIERAVWHERYIGDPKSEPFSPFGFRS* |
| Ga0137380_100409071 | 3300012206 | Vadose Zone Soil | KIQDAIEAIERAVWHERYIAGQKSEPFSPFGFGS* |
| Ga0137381_100273833 | 3300012207 | Vadose Zone Soil | LRTAATSRLAEKYSHGHTENMREAFIKIQDAIEAIERAVWHERYIAGQKSEPFSPFGFGS |
| Ga0137379_100294523 | 3300012209 | Vadose Zone Soil | LRTAATSRLAEKYSRGHTENMREAFIKIQDAIEAIERAVWHERYIAGQKSEPFSPFGFGS |
| Ga0137378_100336645 | 3300012210 | Vadose Zone Soil | MREAFIKIQDAIEAIERAVWHERYIAGQKSEPFSPFGFGS* |
| Ga0137377_111230012 | 3300012211 | Vadose Zone Soil | HTENMREAFIKIQDAIEAIERAVWHERYIAGQKSEPFSPFGFGS* |
| Ga0137371_107188841 | 3300012356 | Vadose Zone Soil | RRDFAERLAEKYNRGDTENTREAFIKIQETIEAIERAVWHERYVAGQKSEPFSPFGFGS* |
| Ga0182036_106457711 | 3300016270 | Soil | NRGDTENMREAFIKIQDVIEAIERAVWHERFIADPKFEPLSPFGFRS |
| Ga0182036_109324801 | 3300016270 | Soil | IKIQDVIEAIERAVWHERYIAGQKSEPFSPFGFGSAP |
| Ga0182036_110498613 | 3300016270 | Soil | GDTENMREAFIKIQDVIEAIERAVWHERYIADPKSEPFSPFGFGS |
| Ga0182036_112076451 | 3300016270 | Soil | FIKIQDVIEAIERAIWHERYIADPKSEPFSPFGFRS |
| Ga0182033_104834723 | 3300016319 | Soil | LAEKHNRGDTENMREAFIKIQDVIEAIERAVWHERYIADPKSEPFSPFGFGS |
| Ga0182033_104979283 | 3300016319 | Soil | ENMREAFIKIQDVIEAIERAVWHERYIADPKSESFSPFGFRS |
| Ga0182032_113108082 | 3300016357 | Soil | DIAEALAEKHNRGDTENMREAFIKIQDAIEAIERAVWHERYIADQKSEPFSPFGFGS |
| Ga0182034_103620011 | 3300016371 | Soil | DTENMREAFIKIQDVIEAIERAVWHEKYIADPKSEPFSPFGFGS |
| Ga0182034_109281481 | 3300016371 | Soil | EALAEKHNRGDTENMREAFIKIQDVIEAIERAVWHERYIVDPKSEPFSPFGFRS |
| Ga0182034_113163911 | 3300016371 | Soil | FIKIQDVIEAIERAVWHERYIADPKSEPFSPFGFGS |
| Ga0182034_115857012 | 3300016371 | Soil | IKIQDVIEAIERAVWHERYIVDPKSEPFSPFGFRS |
| Ga0182034_115865531 | 3300016371 | Soil | AFIKIQDVIEAIERAVWHERYIADPKSEPFSPFGFGS |
| Ga0182040_113593473 | 3300016387 | Soil | DTENMREAFIKIQDVIEAIERAVWHERYIVDPKSEPFSPFGFRS |
| Ga0182040_115586711 | 3300016387 | Soil | REAFIKIQDVIEAIERAVWHERYIADPKSESFSPFGFRS |
| Ga0182039_107594362 | 3300016422 | Soil | AFIKIQDVIEAIERAVWHEKYIADQKSEPFSPFGFGS |
| Ga0182038_106036611 | 3300016445 | Soil | IKIQDVIEAIERAVWHERYIADPKSEPFSPFGFRS |
| Ga0187809_102734621 | 3300017937 | Freshwater Sediment | MREAFIKIQDAIEAIERAIWHERYIVGQKSEPFSPFGFGS |
| Ga0187783_107455412 | 3300017970 | Tropical Peatland | GDMENMGEAFIKIQDVIEAIERAVWHERYIAGQKSEPFSPFGFGSAP |
| Ga0187822_101720491 | 3300017994 | Freshwater Sediment | EAFIKVQDVIEAIERAIWHEGYIAGPNTEPFSPFGFRS |
| Ga0187804_102288391 | 3300018006 | Freshwater Sediment | MHLVGKYNRGDMENMREDFIKIQDVIEAIERAVWHERYIADPKSEPFSPFGFGS |
| Ga0066662_124083341 | 3300018468 | Grasslands Soil | MREAFIKIQDAIEAIERAVWHEGYIAGQKSEPFSPFGFGS |
| Ga0066669_114805781 | 3300018482 | Grasslands Soil | IKIQDVIEAIERAVWHERYIADPKSEPFSPFGFRSAP |
| Ga0193751_10993471 | 3300019888 | Soil | RRDIAERLAEKYNRSDTENAREAFIKSQDAIEAIERAVWHERYIAGQKSGPFLPFGFGS |
| Ga0210406_103973642 | 3300021168 | Soil | NRGDTENMREAFIKIQDVIEAIERAVWHERYITGQRSEPFSPFGFGS |
| Ga0126371_138764231 | 3300021560 | Tropical Forest Soil | AEALAEKHNRGDTENMREAFIKIQDVIEAIERAVWHERYIVDPKSEPFSPFGFRS |
| Ga0209577_100862276 | 3300026552 | Soil | ENMREAFIKIQETIEAIERAVWHERYIAGQKSEPFSPFGFGS |
| Ga0207744_10218682 | 3300026927 | Tropical Forest Soil | ALGEKHNRGDTENMREAFIKIQDVIEAIERAVWHERYIADPKSEPFSPFGFGS |
| Ga0209583_101021142 | 3300027910 | Watersheds | MRETFIKIQDAIEAIERAVWHERYIAGQKSDPFSPFGFGS |
| Ga0209698_104161781 | 3300027911 | Watersheds | VAHRRDVAQALAEKQSRGDTENMREAFIKIQDVIEAIERAIWHERYIADPRTEPFSPFGFRS |
| Ga0170834_1030934811 | 3300031057 | Forest Soil | IAERLAEKYNRGDTENMREAFIKIQETIEAIERAVWHERYIAGQKSEPFSPFGFGS |
| Ga0170823_141945813 | 3300031128 | Forest Soil | YRRDIAERLAEKYNRSDTENAREAFTKSQDAIEAIERAVWHERYIAGQKSGPFLPFGFGS |
| Ga0170824_1021435431 | 3300031231 | Forest Soil | LAEKQNRGDSENIREAFIKIQDVIEAIERAVWHEKYIADPKSEPFSPFGFRSAP |
| Ga0170824_1168162981 | 3300031231 | Forest Soil | AFIKIQETIEAIERAVWHERYIAGQKSEPFSPFGFGS |
| Ga0318534_101389701 | 3300031544 | Soil | MREAFIKIQDVIEAIERAIWHERYIADPKSEPFSPFGFRS |
| Ga0318541_100545412 | 3300031545 | Soil | MREAFIKIQDVIEAIERAVWHERYIADPKSEPFSPFGFGS |
| Ga0318538_107365881 | 3300031546 | Soil | EKHNRGDTENMREAFIKIQDVIETIERAVWHERYIADPKSEPFSPFGFRS |
| Ga0310915_112419631 | 3300031573 | Soil | VTHRRDIVEALAEKHNRGDTENMREAFIKIQDVIEAIERAVWHEKYIADPKSEPFSPFGFGS |
| Ga0318555_103232283 | 3300031640 | Soil | DTENMREAFIKIQDVIEAIERAVWHERYIADPKSEPFSPFGFRS |
| Ga0318561_105531341 | 3300031679 | Soil | REVTHRRDIVEALAEKHNRGDTENMREAFIKIQDVIEAIERAVWHEKYIADQKSEPFSPFGFGS |
| Ga0307474_109607301 | 3300031718 | Hardwood Forest Soil | DRGDTENMREAFVKIQDAIEAIERAVWHERYIAGQKSDPFSPFGFGS |
| Ga0318501_108726831 | 3300031736 | Soil | DTENMREAFIKIQDVIEAIERAVWHERYIADPKSEPFSPFGLPR |
| Ga0306918_103251661 | 3300031744 | Soil | MREAFIKIQDVIEAIERAVWHERYIADPKSEPFSPFGFRS |
| Ga0318547_101161635 | 3300031781 | Soil | VTHRRDIAEALAEKHNRGDTENMREAFIKIQDVIEAIERAVWHERYIADPKSELFSPFGFGS |
| Ga0318547_105125171 | 3300031781 | Soil | EALAEKHNRGDTENMREAFIKIQDVIEAIERAVWHEKYIADQKSEPFSPFGFGS |
| Ga0318568_107912272 | 3300031819 | Soil | REVTHRRDIAGALAEKHNRGDTENMREAFIKIQDVIEAIERAVWHERYIADPKSEPFSPFGFGS |
| Ga0310917_106465211 | 3300031833 | Soil | RRDIAEALAEKHNRGDTENMREAFIKIQDVIEAIERAVWHEKYIADPKSEPFSPFGFGS |
| Ga0318511_104191452 | 3300031845 | Soil | IKIQDVIEAIERAVWHERYIADPKSEPFSPFGFGS |
| Ga0306919_100539067 | 3300031879 | Soil | REAFIKIQDVIEAIERAVWHERFIADPKFEPFSPFGFGS |
| Ga0306919_106482642 | 3300031879 | Soil | GDSENIREAFIKIQDVIEAIERAVWHERYIADPKSEPFSPFGFRSAP |
| Ga0306925_100927401 | 3300031890 | Soil | ALAEKHNRGDTENMREAFIKIQDVIEAIERAVWHERYIADPKSEPFSPFGFGS |
| Ga0306925_107610631 | 3300031890 | Soil | IKIQDVIEAIERAVWHEKYIADPKSEPFSPFGFGS |
| Ga0306925_111585692 | 3300031890 | Soil | TENMREAFIKIQDVIEAIERAVWHEKYIADPKSEPFSPFGFGS |
| Ga0318520_108335141 | 3300031897 | Soil | AEKHNRGDTENMREAFIKIQDVIEAIERAVWHERYIADPKSEPFSPFGFGS |
| Ga0306921_101157537 | 3300031912 | Soil | MREAFIKIQDVIEAIERAVWHERYIADPKSELFSPFGFGS |
| Ga0306921_104281564 | 3300031912 | Soil | TENMREAFIKIQDVIEAIERAVWHEKYIADQKSEPFSPFGFGS |
| Ga0306921_115147821 | 3300031912 | Soil | EAFIKIQDVIEAIERAVWHERYIADPKSEPFSPFGFGS |
| Ga0306921_122726392 | 3300031912 | Soil | RGDTENMREAFIKIQDVIEAIERAVWHEKYIADPKSEPFSPFGFGS |
| Ga0310912_109612051 | 3300031941 | Soil | GDTENMREAFIKIQDVIEAIERAVWHEKYIADQKSEPFSPFGFGS |
| Ga0310916_100472167 | 3300031942 | Soil | TENMREAFIKIQDVIEAIERAVWHERYIADPKSEPFSPFGFGS |
| Ga0310916_107754871 | 3300031942 | Soil | DTENMREAFIKIQDVIEAIERAVWHERFIADPKFEPFSPFGFRS |
| Ga0310913_103777212 | 3300031945 | Soil | RYGNMREAFIKIQDVIEAIERAVWHERYIADPKSEPFSPFGFGS |
| Ga0310913_106133943 | 3300031945 | Soil | ENMGEAFIKIQDVIEAIERAVWHERYIAGQKSEPFSPFGFGSAP |
| Ga0310913_108841522 | 3300031945 | Soil | EALAEKHNRGDTENMREAFIKIQDVIEAIERAVWHERFIADPKFEPLSPFGFRS |
| Ga0310910_112553891 | 3300031946 | Soil | LAEKHNRGDTENMREAFIKIQDVIEAIERAVWHEKYIADPKSEPFSPFGFGS |
| Ga0310909_115304821 | 3300031947 | Soil | GDTENMREAFIKIQDVIEAIERAVWHEKYIADPKSEPFSPFGFGS |
| Ga0310909_116896852 | 3300031947 | Soil | MREALIKIQDVIEAIERAVWRERFIADPKFEPFSP |
| Ga0306926_106979593 | 3300031954 | Soil | RDIAEALAEKHNRGDTENMREAFIKIQDVIEAIERAVWHERYIVDPKSEPFSPFGFRS |
| Ga0306926_107162532 | 3300031954 | Soil | HRRDIAQRLAEKYNRGDTENMREAFIKIQDAIEAIERAVWHERYIAGQKSEPFSPSGFGS |
| Ga0306922_107736253 | 3300032001 | Soil | LAEKHNRGDTENMREAFIKIQDVIEAIERAVWHERYIVDPKSEPFSPFGFRS |
| Ga0306922_108551022 | 3300032001 | Soil | HNRGDTENMREAFIKIQDVIEAIERAVWHEKYIADQKSEPFSPFGFGS |
| Ga0306922_111850031 | 3300032001 | Soil | EALAEKHNRGDAENMREAFIKIQDVIEAIERAVWHERYIVDPKSEPFAPFGFRS |
| Ga0310911_102048002 | 3300032035 | Soil | HNRGDRENMGEALIKIQDVIEAIERAVWHERYIAGQKSEPFSPFGFGSAP |
| Ga0306924_102298851 | 3300032076 | Soil | TMREAFIKIQDVIEAIERAVWHERYIADPKSEPFSPFGLPR |
| Ga0306924_106094863 | 3300032076 | Soil | TENMREAFIKIQDVIEAIERAVWHERYIADPSEPFSSFGFGS |
| Ga0306924_106565993 | 3300032076 | Soil | TENMREAFIKIQDVIEAIERAVWHERYIADPKSESFSPFGFRS |
| Ga0306924_119087451 | 3300032076 | Soil | EKYNRGDTENMREAFIKIQDAIEAIERAVWHERYIAGQKSEPFSPSGFGS |
| Ga0307471_1008882551 | 3300032180 | Hardwood Forest Soil | RRDVARTLAEKQNRGDSENIREAFIKIQDVIEAIERAVWHEKYIADPKSEPFSPFGIRSA |
| Ga0306920_1006298854 | 3300032261 | Soil | RRDIVEALAEKHNRGDTENMREAFIKIQDVIEAIERAVWHEKYIADQKSEPFSPFGFGS |
| Ga0306920_1043504732 | 3300032261 | Soil | NMREAFIKIQDVIEAIERAVWHERFIADPKFEPFSL |
| Ga0318519_101829724 | 3300033290 | Soil | KHNRGDTENMREAFIKIQDVIEAIERAVWHERFIADPKFEPFSPFGFGS |
| Ga0318519_103946682 | 3300033290 | Soil | REAFIKIQDVIEAIERAIWHERYIADPKSEPFSPFGFRS |
| ⦗Top⦘ |
|
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |