Metagenome Family F104617

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F104617
Family Type	Metagenome
Number of Sequences	100
Average Sequence Length	165 residues
Representative Sequence	MVEDLTKLKPKRLGRRLEELARDALPCVSAVVSHGNPESGLTVALWVEAQGRRDVRDLARVLDSEPGGHVATGWSLLSPSRQHPHWRLLLHVDVERPVLCSFVVRFDITDHPNDQLRLALPLVLAASGFALAFDRFPEPDEPVAWVPAPAARECVFEVLTAAGV
Number of Associated Samples	68
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.00 %
% of genes near scaffold ends (potentially truncated)	44.00 %
% of genes from short scaffolds (< 2000 bps)	75.00 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.81

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (97.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (27.000 % of family members)
Environment Ontology (ENVO)	Unclassified (34.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (beta-barrel)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.04% β-sheet: 28.65% Coil/Unstructured: 45.31%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.81
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.81
Powered by PDBe Molstar

Structural matches with PDB biological assemblies

PDB ID	Structure Name	Biol. Assembly	TM-score
7k1w	PIKFYVE/FIG4/VAC14 COMPLEX CENTERED ON FIG4 - MAP3	1	0.51486
3lwt	CRYSTAL STRUCTURE OF THE YEAST SAC1: IMPLICATIONS FOR ITS PHOSPHOINOSITIDE PHOSPHATASE FUNCTION	1	0.51314
3lwt	CRYSTAL STRUCTURE OF THE YEAST SAC1: IMPLICATIONS FOR ITS PHOSPHOINOSITIDE PHOSPHATASE FUNCTION	2	0.51314

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF02534	T4SS-DNA_transf	16.00
PF04851	ResIII	14.00
PF12696	TraG-D_C	7.00
PF00239	Resolvase	2.00
PF07505	DUF5131	1.00
PF02705	K_trans	1.00
PF00164	Ribosom_S12_S23	1.00
PF14355	Abi_C	1.00
PF10099	RskA	1.00
PF13604	AAA_30	1.00
PF00400	WD40	1.00
PF01936	NYN	1.00
PF14106	DUF4279	1.00
PF06067	DUF932	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG3505	Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase	Intracellular trafficking, secretion, and vesicular transport [U]	16.00
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	2.00
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	2.00
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	1.00
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	1.00
COG4422	Bacteriophage protein gp37	Mobilome: prophages, transposons [X]	1.00

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.00 %
Unclassified	root	N/A	3.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.00 %
Unclassified	root	N/A	3.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.00 %
Unclassified	root	N/A	3.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	86.00 %
Unclassified	root	N/A	3.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	86.00 %
Unclassified	root	N/A	3.00 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	77.00 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4.00 %
Unclassified	root	N/A	3.00 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	77.00 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.00 %
Unclassified	root	N/A	3.00 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	77.00 %
Unclassified	root	N/A	3.00 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	2.00 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	1.00 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	1.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	77.00 %
Unclassified	root	N/A	3.00 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2.00 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.00 %
Paraburkholderia atlantica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia atlantica	1.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	77.00 %
Unclassified	root	N/A	3.00 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	2.00 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.00 %
Paraburkholderia atlantica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia atlantica	1.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	77.00 %
Unclassified	root	N/A	3.00 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2.00 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.00 %
Paraburkholderia atlantica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia atlantica	1.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_100397393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767	Open in IMG/M
3300003996\|Ga0055467_10198429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia atlantica	618	Open in IMG/M
3300003996\|Ga0055467_10201089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300003998\|Ga0055472_10285894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300004479\|Ga0062595_102281065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300005467\|Ga0070706_100304181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1488	Open in IMG/M
3300005468\|Ga0070707_100619763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1044	Open in IMG/M
3300005471\|Ga0070698_101309263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	675	Open in IMG/M
3300005518\|Ga0070699_101409918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300005529\|Ga0070741_10104442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2993	Open in IMG/M
3300005529\|Ga0070741_10121784	All Organisms → cellular organisms → Bacteria	2693	Open in IMG/M
3300005532\|Ga0070739_10029454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4101	Open in IMG/M
3300005536\|Ga0070697_100133545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2083	Open in IMG/M
3300005560\|Ga0066670_10561326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	697	Open in IMG/M
3300006032\|Ga0066696_10827489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300006865\|Ga0073934_10876824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300007764\|Ga0102950_1144536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	692	Open in IMG/M
3300009137\|Ga0066709_101955021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	814	Open in IMG/M
3300009176\|Ga0105242_11913502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300009817\|Ga0105062_1102683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300009840\|Ga0126313_10456836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1019	Open in IMG/M
3300009840\|Ga0126313_10876605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	732	Open in IMG/M
3300009870\|Ga0131092_10192976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2144	Open in IMG/M
3300009873\|Ga0131077_10017164	All Organisms → cellular organisms → Bacteria	13023	Open in IMG/M
3300010038\|Ga0126315_11109117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300010041\|Ga0126312_10014365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5297	Open in IMG/M
3300010041\|Ga0126312_11319357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300010322\|Ga0134084_10118244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	863	Open in IMG/M
3300010333\|Ga0134080_10558580	Not Available	552	Open in IMG/M
3300010938\|Ga0137716_10015355	All Organisms → cellular organisms → Bacteria	12555	Open in IMG/M
3300012091\|Ga0136625_1023163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2300	Open in IMG/M
3300012092\|Ga0136621_1003954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	6182	Open in IMG/M
3300012185\|Ga0136619_10003370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6235	Open in IMG/M
3300012186\|Ga0136620_10192182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	908	Open in IMG/M
3300012186\|Ga0136620_10253394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	770	Open in IMG/M
3300012186\|Ga0136620_10304214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300012187\|Ga0136622_10250576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300012188\|Ga0136618_10021357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2864	Open in IMG/M
3300012198\|Ga0137364_10804384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	710	Open in IMG/M
3300012198\|Ga0137364_10901721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669	Open in IMG/M
3300012201\|Ga0137365_10176820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1599	Open in IMG/M
3300012201\|Ga0137365_10189024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1542	Open in IMG/M
3300012201\|Ga0137365_10814878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	682	Open in IMG/M
3300012204\|Ga0137374_11020549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300012206\|Ga0137380_11286185	Not Available	616	Open in IMG/M
3300012211\|Ga0137377_10811418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	868	Open in IMG/M
3300012211\|Ga0137377_11456707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	612	Open in IMG/M
3300012211\|Ga0137377_11767655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300012350\|Ga0137372_10251683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1389	Open in IMG/M
3300012353\|Ga0137367_10069162	All Organisms → cellular organisms → Bacteria	2623	Open in IMG/M
3300012353\|Ga0137367_10295070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1161	Open in IMG/M
3300012354\|Ga0137366_10165822	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300012355\|Ga0137369_10368285	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300012355\|Ga0137369_10584588	Not Available	779	Open in IMG/M
3300012355\|Ga0137369_10804405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300012355\|Ga0137369_11056629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300012358\|Ga0137368_10082567	All Organisms → cellular organisms → Bacteria	2556	Open in IMG/M
3300012358\|Ga0137368_10311464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1060	Open in IMG/M
3300012358\|Ga0137368_10443717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	844	Open in IMG/M
3300012358\|Ga0137368_10510089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	774	Open in IMG/M
3300012360\|Ga0137375_10302515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1446	Open in IMG/M
3300012360\|Ga0137375_10489280	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300012360\|Ga0137375_11115122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300012532\|Ga0137373_10189374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1703	Open in IMG/M
3300012532\|Ga0137373_10987830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300012678\|Ga0136615_10205640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	899	Open in IMG/M
3300012678\|Ga0136615_10513895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300012679\|Ga0136616_10372893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300012684\|Ga0136614_10072537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2608	Open in IMG/M
3300012943\|Ga0164241_10076332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2419	Open in IMG/M
3300013765\|Ga0120172_1166350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300014259\|Ga0075311_1084812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300015371\|Ga0132258_12340991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1339	Open in IMG/M
3300017695\|Ga0180121_10086651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1120	Open in IMG/M
3300017787\|Ga0183260_10014193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	6121	Open in IMG/M
3300017787\|Ga0183260_10058136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2859	Open in IMG/M
3300017787\|Ga0183260_10071715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2538	Open in IMG/M
3300017787\|Ga0183260_10142145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1715	Open in IMG/M
3300017787\|Ga0183260_10324796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1040	Open in IMG/M
3300017787\|Ga0183260_10612523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	698	Open in IMG/M
3300017787\|Ga0183260_10751057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300017789\|Ga0136617_10062113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3283	Open in IMG/M
3300017789\|Ga0136617_10265446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1424	Open in IMG/M
3300017789\|Ga0136617_11009030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300018076\|Ga0184609_10416671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300019458\|Ga0187892_10346654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	724	Open in IMG/M
3300019888\|Ga0193751_1096387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1146	Open in IMG/M
3300026550\|Ga0209474_10479937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300027618\|Ga0208736_1051851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1018	Open in IMG/M
3300027638\|Ga0208612_1137057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300027773\|Ga0209810_1102070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1288	Open in IMG/M
3300027961\|Ga0209853_1044769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1245	Open in IMG/M
3300028878\|Ga0307278_10000009	All Organisms → cellular organisms → Bacteria	121311	Open in IMG/M
3300030619\|Ga0268386_10058064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3039	Open in IMG/M
3300031228\|Ga0299914_10734712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	830	Open in IMG/M
3300031228\|Ga0299914_11232138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300031228\|Ga0299914_11489570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300031450\|Ga0272433_10000248	All Organisms → cellular organisms → Bacteria	124855	Open in IMG/M
3300032770\|Ga0335085_10002247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	36806	Open in IMG/M
3300032805\|Ga0335078_10006729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17018	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.00%
Host-Associated	Host-Associated	2.00%
Engineered	Engineered	2.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.00%
Aquatic	Environmental → Aquatic	31.00%
Plants	Host-Associated → Plants	2.00%
Wastewater	Engineered → Wastewater	2.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.00%
Freshwater	Environmental → Aquatic → Freshwater	25.00%
Marine	Environmental → Aquatic → Marine	3.00%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.00%
Activated Sludge	Engineered → Wastewater → Activated Sludge	2.00%
Sediment	Environmental → Aquatic → Sediment	1.00%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	1.00%
Cave	Environmental → Terrestrial → Cave	1.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.00%
Ice	Environmental → Aquatic → Freshwater → Ice	25.00%
Loam	Environmental → Terrestrial → Soil → Loam	5.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.00%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.00%
Sand	Environmental → Terrestrial → Soil → Sand	2.00%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	2.00%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.00%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.00%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	1.00%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.00%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	25.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.00%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.00%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	3.00%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.00%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	2.00%
Neutral	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral	1.00%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.00%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.00%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	1.00%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	27.00%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	23.00%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.00%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.00%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	3.00%
Polar Desert	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert	2.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.00%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.00%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.00%
Hot Spring Fe-Si Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral → Hot Spring Fe-Si Sediment	1.00%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.00%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.00%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.00%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.00%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.00%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	1.00%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	1.00%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.00%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	1.00%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	1.00%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300007764	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_D2_MG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010938	Sediment microbial community from Chocolate Pots hot springs, Yellowstone National Park, Wyoming, USA. Combined Assembly of Gp0156111, Gp0156114, Gp0156117	Environmental	Open in IMG/M
3300012091	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ483 (23.06)	Environmental	Open in IMG/M
3300012092	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ445A (23.06)	Environmental	Open in IMG/M
3300012185	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ353 (21.06)	Environmental	Open in IMG/M
3300012186	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)	Environmental	Open in IMG/M
3300012187	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ448 (21.06)	Environmental	Open in IMG/M
3300012188	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ330 (21.06)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012678	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)	Environmental	Open in IMG/M
3300012679	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ299 (21.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300014259	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027618	Polar desert microbial communities from Antarctic Dry Valleys - UQ255 (SPAdes)	Environmental	Open in IMG/M
3300027638	Polar desert microbial communities from Antarctic Dry Valleys - UQ889 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031450	Rock endolithic microbial communities from Victoria Land, Antarctica - University Valley sud	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1003973931	3300000956	Soil	SKPSRPPANVETMVEDLTKLKPKRLGRRLEELARDALPCISAVASHADPEQGLTVALWIEARGRRDVRDLARVLQSEPGGHVSTGWSLLTPSRKHPQWRLLLHVDVDRPVLCSFVVRFDIADHPDDQLRLALPLLLAASGFALAFDGFPQPDEQVAWVPAPAAREGVIEVLAAVNLPR*
Ga0055467_101984291	3300003996	Natural And Restored Wetlands	KIMVESLTQLKPKRLNRRLEELARNALPCVSAVVSHGDPEHGLTVALWVESQGRRDVLDLARVLESEPGGHVETGWSLLSPSRRHPKWRLLLHVSFERPGLCDFVIRFDITEHPSDELRGALPLLLAASGFALAFDGSPSSNRPVTWVPAPAVRDCVFEVLAAVGP*
Ga0055467_102010891	3300003996	Natural And Restored Wetlands	VVEQLTALKPKRLGRRLEELAREALPCVSAVVADGDPEHGLTVALWVESRGRRDVLDLARVLESEPGGHVETGWSLLSPSRRHPEWRLLLRVGFERPVLCDFVVRFDVTDHPDDQVRLALPLLLAASGFALAFNGFAESDRPVTWVPAPAARDCVYDALAAVGP*
Ga0055472_102858941	3300003998	Natural And Restored Wetlands	TKLSPKRLERRLEELAGEALPCTSAVVFDGSPADGLTVGLRVESEGRRDVLDLARVLEEEPNGHVFSAWALLAPSRGHPSWRLILRVHFERPVKCSFVVRLDVRDHPGDPLRTALPLILAADRFALAFDGPPEMDRPVLWVSAPAARDCVLEIIAAVGV*
Ga0062595_1022810651	3300004479	Soil	MVEDLTKLKPKRLGRRLEELARDALPCVSAVVSHGNPESGLTVALWVEAQGRRDVRDLARVLDSEPGGHVATGWSLLSPSRQHPHWRLLLHVDVERPVLCSFVVRFDMTDHPNDQLRLALPLILAASGFALAFDRFPE
Ga0070706_1003041812	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MVEDLTKLKPKRLGRRLEELARGALPCVSAVVSHGNPESGLTVALWVEAQGRRDVRDLARVLDSEPGGHVATGWSLLSPSRQHPHWRLLLHIDVERPVLCSFVVRFDITDHPNDQLRLALPLILAASGFALAFDRFPEPDEPVAWVPAPAARECVFEVITATGV*
Ga0070707_1006197632	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MVEDLTKLKPKRLGRRLEELARDALPCVSAVVSHGNPESGLTVALWVEAQGRRDVRDLARVLDSEPGGHVATGWSLLSPSRQHPHWRLLLHVDVERPVLCSFVVRFDITDHPNDQLRLALPLVLAASGFALAFDRFPEPDEPVAWVPAPAARECVFEVLTAAGV*
Ga0070698_1013092632	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MVSRPATATTGGGGNVRGILEDLTQLPPKRLERKLEEIAREAMPCVSATVFDGSPVDGLTVGLQVESQRKRDVLDLARVLEIEPDTYAVSAWALLAPSRKQPHWRLLLRVEFERPVRCSFAVRLDVGDHPSDPLRATLPLILAADRFALALD
Ga0070699_1014099181	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	TRTSSRRRANVHTVLEDLTKLPPKRLERRLEELAGEALPCVGTSSFDANPQDGLTVGLWIEAKDRRDVLDLARVLESEPGGHVSTGWSLLSPSRNHPYWRLLLRAQFERPVKCSFAVRFDVNEHASDEMRAALPLLLAAAGFALGFNGLPEPGRPATWLPAPTVRDCIVEVLAACFGT*
Ga0070741_101044422	3300005529	Surface Soil	VRGILEDLTSLPPKKLARRLDELAREALPCVAANVFDGNPHEGLTVGLRVESEGRRDVLDLARVLETEPNGHVSAGWSLLSPSRRHPYWRLLLRVHFERPVKCDFAIRFDVRNHPSDAMRAALPLLLAARGFALSFGRDPEPGRPLVWVAAPAARDCVFEALTAVGI*
Ga0070741_101217842	3300005529	Surface Soil	VNAILEDLAKLPPKRLERRLEELAREALPCVNAIVFDGNPRDGLTVGLWVEAQGRRDVRDLARVLEIEPHGHVSTGWSLLSPSRQHPYWRLLLRVHFERPVKCSFVVRFDVRDHPSDSLRAALPLLLAAAGFALGFDALPEPERPVVWIPAPGARECVLDVLTAPAS*
Ga0070739_100294543	3300005532	Surface Soil	VRGILEDLTNLPPKRLARRLDELAREALPCLATSVFDGNPQDGLTVGLRVESEGRRDVLDLARVLETEPNGHVSAGWSLLSPSRRHPSWRLLLRVHFERPVTCDFAIRFDVRDHPSDAMRAALPLLLAASGFALSFDRNPAPGRPLIWVEAPAARDCVFEALTAVGI*
Ga0070697_1001335451	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MVEDLTKLKPKRLGRRLEELARDALPCVSAVVSHGNPESGLTVALWVEAQGRRDVRDLARVLDSEPGGHVATGWSLLSPSRQHPHWRLLLHVDVERPVLCSFVVRFDITDHPNDQLRLALPLVLAASGFALAFDRFPEPDEPVAWVPAPAARECVFEVLTATGR*
Ga0066670_105613262	3300005560	Soil	MVEDLTKLKPKRLGRRLEELARDALPCISAVASHADPEEGLTVALWIEARGRRDVRDLARVLQSEPGGHVSTGWSLLTPSRKHPQWRLLLHVDVDRPVLCSFVVRFDIADHPDDQLRLALPLLLAASGFALAFDGFPQPDDQVAWVPAPAAREGLVEVLAALNLPR*
Ga0066696_108274891	3300006032	Soil	HESHCGRGSATVGSGGSQQAPPRNLSEWRGNVMSILEDLTRLTAKRLERRLEELAREALPCVSAVAFEASPEEGLTVGLWVESQGRRDVRDLARVLETEPGGHVATGWSLLSPSRPHPYWRLLLRVHFERPVLCSFVVRFDVRDGASDAMRSALPLLLAASGFALAFDQLPQTGRPLAWIPAPAVRDCMYEVLGAG
Ga0073934_108768241	3300006865	Hot Spring Sediment	MVKIMVESLTQLKPKRLNRRLEELARNALPCVSAVVSHGDPEHGLTVALWVESQGRRDVLDLARVLESEPGGHVETGWSLLSPSRRHPYWRLLLRVNFERPVLCSFGVRFDVTDHSSDELRLALPLLLAASGFALAFNGFSQPDRPVTWVPAPAARECVLEVL
Ga0102950_11445362	3300007764	Soil	MVEDLTTLKPKRLERRLEELARDALPCVSAVVSHGDPEHGLTVALCVESHGRRDVLDLARVLQTEPGGHVSTGWSLLSPSRKHPFWRMLLHVDIERPVLCSFVVRFDVTEHPDDQLRLALPLLLAASRFALAFDGFPEPD
Ga0066709_1019550211	3300009137	Grasslands Soil	PKRLGRRLEELASDALPCISAVASHADPEQGLTVALWIEARGRRDVRDLARVLQSEPGGHVSTGWSLLTPSRKHPQWRLLLHVDVDRPVLCSFVVRFDIADHPDDQLRLALPLLLAASGFALAFDGFPQLDEQVACVPAPVAREGVIEVLAALNLPR*
Ga0105242_119135021	3300009176	Miscanthus Rhizosphere	VNAILEDLTTLPPKRLAKRLEELARDALPCLAANVFDGNPQDGLTVGLWVESQGRRDVLDLARVLETEPSGHVSTSWALAPESRKHLDRRLLLRVQIERPVICHFVVRFDVGDHPSDRQRAALPLLLAATGFALCFDGFRSSERPIAWIPAPLARECVLEALSASGV*
Ga0105062_11026831	3300009817	Groundwater Sand	LEQLAREGLPCGSAIVFDGSPSEGLTVGLRVESEGRRDVLDLARVLEEEPGGHVFSAWALLAPSRGHAVWRLLLRVHFERPVQCSFVVRLDVRDHPNDPLRAALPLILAADRFALAFDGPPEQDRPLVWVSAPAARDCVVEVLTAVGIA*
Ga0126313_104568361	3300009840	Serpentine Soil	MVEDLTKLKPKRLGRRLEELASDALPCISAVASHADPKQGLTVALWIEARGRRDVRDLARVLQSEPGGHVSTGWSLLTPSRKHPQWRLLLQVDVDRPVLCSFVVRFDIAEHSDDQLRLALPLLLAASGFALAFDGFPQPDDQVAWVPAPAAREGLVEVLAALNRPR*
Ga0126313_108766051	3300009840	Serpentine Soil	LEDLTQLSPRRLERRLEQLAHDALACRAATAFDANPNDGLTVGLHVDSRGRRDVLDLARVLDIEPAGHVRSAWASLSPTRSHAQWRLLLRVHFERPVSCSLVVCFDVGDHPADRLRASLPLILAADRFALAFDAAPTEERALVWISAPAVKDCVFDVLNAVGV*
Ga0131092_101929762	3300009870	Activated Sludge	MAESLTQLKPKRLSRRLEELARNALPCVSAVVSHGDPEHGLTVALWVESQGRRDVLDLARVLESEPGGHVETGWSLLSPSRRHPHWRLLLHVNFERPVLCDFVVRFDVSDHSNDELRLDLPLLLAASGFALAFDGFPEADMPVAWIPAPTAREGVLDVLAAVGP*
Ga0131077_100171644	3300009873	Wastewater	MAESLTQLKPTRLSRRLEELARNALPCVSAVVSHGDPEHGLTVALWVESQGRRDVLDLARVLESEPGGHVETGWSLLSPSRRHPHWRLLLHVNFERPVLCDFVVRFDVSDHSNDELRLDLPLLLAASGFALAFDGFPEADMPVAWIPAPTAREGVLDVLAAVGP*
Ga0126315_111091172	3300010038	Serpentine Soil	MVEDLTKLKPKRLGRRLEELARDALPCISAVASHADPEQGLTVALWIEACGRRDVRDLARVLQSEPGGHVATGWSLLTPSRKHPQWRLLLHVDVDRPVLCSFVVRFDIADHPDDQLRLSLPLLLAASGFALAFDGFPEPDEQV
Ga0126312_100143653	3300010041	Serpentine Soil	VNAILEDLTQLSPKRLERRLEHLAREALACGSAIVFDGSPSEGLTVGLRVESEGRRDVLDLARVLEDEPNARVFSAWALLAPSRGHPSWRLLLRVHFERPVNCSFVVRLAVRDHPSDPLRAALPLILAADRFALAFDGPPEQNQPLVWVSAPAARDCVFEVLAAVGIA*
Ga0126312_113193571	3300010041	Serpentine Soil	APKRLERRLEELARDALPCVSAMVFAGNPEEGLTVGLWVESQGRRDVLDLARVLESEPGGHVATGWSLLSPKRGNASWRLLLRVHFERPVKCSLVIQFEIGEDMNDPMRVALPLLLAANGFALGFDSLPDSERPVAWIPAPAARECVFEVLSVVGV*
Ga0134084_101182442	3300010322	Grasslands Soil	MVEDLTKLKPKRLGRRLEELARDALPCISAVASHADPEQGLTVALWIEARGRRDVRDLARVLQSEPGGHVSTGWSLLTPSRKHPQWRLLLHVDVDRPVLCSFVVRFDIADHPDDQLRLALPLLLAASGFALAFDGFPQPDDQVAWVPAPAAREGLVEVLAAVNLPR*
Ga0134080_105585801	3300010333	Grasslands Soil	MVEDLTKLKPKRLGGRLEELASDALPCISAVASHADPEQGLTVALWIEARGRRDVRDLARVLDSEPGGHVSSGWSLLAPSRKYPHWRLLLHVDVDRPVLCSFVVRFDVADHPDDQLRLALPLLLAASGFALAFDGFPQPDEHVAWVPAPAAREGVV
Ga0137716_100153554	3300010938	Hot Spring Fe-Si Sediment	VRGILEDLTTLPPKKLARRLDELAREALPCVAANVFDGNPHEGLTVGLRVEPEGRRDVLDLARVLETEPNGHVSAGWSLLSPSRRHPYWRLLLRVHFERPVKCDFAIRFDVRNHPSDAMRAALPLLLAARGFALSFGRDPEPGRPLIWVAAPAARDCVFEALTAVGI*
Ga0136625_10231632	3300012091	Polar Desert Sand	VSLMVEDLTRLSPKRLGRRLEELAREGLPCASATVFDGSPQEGLTVGLRVESQGRRDVLDLARVLEIEPNGYVFSAWALLSPSREHPYWRLLLRVQFERPVSCAFVVRFDVRDQSSDPLRAALPLLLASDRYALAFDGAPDPNRPLLWVAAPAARDCVLEVLTAAGV*
Ga0136621_10039544	3300012092	Polar Desert Sand	VRGILEDLTKLPPKRLERKLEELAREALPCVSVTALDANPADGLTVGLQVESLGRRDVLDLARVLEIEPDGFVVSAWALLSPSRKLAQWRLLLRVELERPVRCSFAVRLDVRDQPSDPLHVTLPLILAADRFALAFDGTPDQDRPLVWVAAPAARDCVFEVLAAVGIA*
Ga0136619_100033703	3300012185	Polar Desert Sand	VKGILEDLTKLPPKRLERKLEELAREALPCVSVTAFDANPADGLTVGLQVESQGRRDVLDLARVLEIETGGFVVSAWAFLTPGRKHPYWRLLLRVDFERPVRCSFAVRLDIRDQPSDPLRAALPLILAADRFALAFDGSPERDRQLVWVAAPAARECVFEVLQAVGIA*
Ga0136620_101921822	3300012186	Polar Desert Sand	MVEDLTMLSPKRLGRRLEELAREGLPCASATVFDGSPQEGLTVGLRVESQGRRDVLDLARVLEIEPNGYVFSAWALLSPSREHPYWRLLLRVQFERPVSCAFVVRFDVRDHSSDPLRAALPLLLASDRYALAFDGAPDPNRPLLWVAAPAARDCVLEVLTAAGV*
Ga0136620_102533941	3300012186	Polar Desert Sand	LEDLTKLPPKRLERKLEELAREALPCVAVTVFDGNPSNGLTVGLQVESQGRRDVLDLARVLEIEPDGYVVSAWAFLTPGRKHPYWRLLLRVDFERPVRCSFAVRLDIRDQPSDPLRAALPLILAADRFALAFDGTPERDRQLVWVAAPAARECVFEVLAAVGIA*
Ga0136620_103042142	3300012186	Polar Desert Sand	ELAREGLPCASATVFDGSLQEGLTVGLRVESQGRRDVLDLARVLEIEPNGYAFSAWALLSPSGEYPYWRLLLRVQFERPVSCSFVVRFDVREHPSDPLRAALPLLLASDRFALAFDGAPDPNRPLLWVAAPTARECVLEILTAVGI*
Ga0136622_102505761	3300012187	Polar Desert Sand	MVPRAATATTGSGGNVRSILEDLTKLPPKRLERKLEELAREALPCVAVTVFDGNPSDGLTVGLHVESQGRRDVLDLARVLEIEPDGYVVSAWALLTPSRKHPHWRLLLRVEFERPVRCSFAVRLDVRDQPSDPLRATLPLILAAARFALAADGSPDRDRERPLVWVAAPAARQCVFDVVAAIGIV*
Ga0136618_100213572	3300012188	Polar Desert Sand	VRGILEDLTKLPPKRLERKLEELAREALPCVAVTVFDGNPSDGLTVGLHVESQGRRDVLDLARVLEIEPDGYVVSAWALLTPSRKHPHWRLLLRVEFERPVRCSFAVRLDVRDQPSDPLRATLPLILAAARFALAADGSPDRDRERPLVWVAAPAARERVFELLAAVGIA*
Ga0137364_108043842	3300012198	Vadose Zone Soil	MVEDLTKLKPKRLGRRLEELARDALPCISAVASHADPEQGLTVALWIEAHGRRDVRDLARVLQSEPGGHVSTGWSLLTPSRKHPQWRLLLHVDVDRPVLCSFVVRFDIADHPDDQLRLALPLLLAASGFALAFDGFPQLDEQVAWVPAPVAREGVIEVLAALNLPR*
Ga0137364_109017211	3300012198	Vadose Zone Soil	VHTVLEDLTKLPPKRLERRLEELASEALPCVGASAFDANPQDGLTVGLWIEATDRRDVLDLARVLESEPGGHVSTGWSLLSPGRNHPYWRLLLRAQFERPVKCSFAVRFDVHEHARDEMREALPLLLAAAGFALGFNS
Ga0137365_101768202	3300012201	Vadose Zone Soil	VSTVLEDLTKLPPKRLERRLEELAGEALPCVGASAFDANPQDGLTVGLWIEAKDRRDVLDLARVLESEPGGHVSTGWSLLSPSRNHSYWRLLLRAQFERPVKCSFAVRFDVHEHASDEMRAALPLLLAAAGFALGFNGLPEPGRPATWLPAPTVRDCIVEVLAAGFDT*
Ga0137365_101890242	3300012201	Vadose Zone Soil	VNAILEDLTNLSPKRLERRLEQLAGEALPCSSASVFEGSPTEGLTVGLSVESHGRRDVLDLARVLEEEPSGHVFSAWALLAPSRGHPSWRLLLRVHFERPVKCSFVVRLDVRDHPSDPLRAALPLILAADRFALAFNGLPEEDRPLVWVSAPAARECVLEILAAVGV*
Ga0137365_108148782	3300012201	Vadose Zone Soil	MVENLTNLKPKRLGRRLEELSREALPCVSAVVSHGDPEHGLTVALWVESRGRRDVRDLTRVLESEPGGHVVTGWSLLSPSRKHPHWRLFLHVDVERPVLCSFVVRFDIADHPDDQLRLALPLLLAASGFALAFDGFPQPDEQVAWVPAPAAREGVIEVLAALNLPK*
Ga0137374_110205491	3300012204	Vadose Zone Soil	KSKPSRPPANVETMVEDLTKLKPKRLGRRLEELARDALPCISAVASHADPEQGLTVALWIEARGRRDVRDLARVLQSEPGGHVSTGWSLLTPSRKHPQWRLLLHVDVDRPVLCSFVVRFDIADHPDDQLRLALPLLLAASGFALAFDGFPQPDEQVAWVPAPAAREGVTEVLAALNLPR*
Ga0137380_112861851	3300012206	Vadose Zone Soil	EDLTKLKPKRLGRRLEELARDALPCISAVASHADPEQGLTVALWIEARSRRDVRDLARVLDSEPGGHVSSGWSLLAPSRKYPHWRLLLHVDVDRPVLCSFVVRFDVADHPDDQLRLALPLLLAASGFALAFDGFPQPDEQVAWVPAPAAREGVVEVLAAVNLPR*
Ga0137377_108114182	3300012211	Vadose Zone Soil	VEDLTKLKPKRLERRLEELARDALPCISAVASHADPEQGLTVALWIEARGRRDVRDLARVLHSEPGGHVSTGWSLLTPSRKHPHWRLLLHVDVDRPVLCSFVVRFDVADHPDDQLRLALPLLLAASGFALAFDGFPQPDEQVAWVPAPAAREGVVEVLAAVNLPR*
Ga0137377_114567071	3300012211	Vadose Zone Soil	AAPPTQVNNSKPSRPPANVETVVEDLTNLKPKRLGRRLEELASDALPCISAVASHADPEQGLTVALWIEARGRRDVRDLARVLQSEPGGHVSTGWSLLTPSRKHPQWRLLLHVDVDRPVLCSFVVRFDIADHPDDQLRLALPLLLAASGFALAFDGFPQPDEQVAWVPAPAAREGVIEVLAALNLPK*
Ga0137377_117676551	3300012211	Vadose Zone Soil	ALPCVGASAFDANPQDGLTVGLWIEAKDRRDVLDLARVLESEPGGHVTTGWSLLSPSRNHPYWRLLLRVQFERPVRCSFVVRFDVHEHPRDDMLRALPLLLAASGFTLGFDALPSAGGAVTWLPAPSVRDCVLDVLSHLRP*
Ga0137372_102516831	3300012350	Vadose Zone Soil	MVEDLTKLKPKRLGRRLEELARDALPCISAVASHADPEQGLTVALWIESHGRRDVRDLARVLQSEPGGHVSTGWSLLTPSRMHPQWRLLLHVDVDRPVLCSFVVRFDVADHPDDQLRLALPLLLAASGFALAFDGFPQPDEQVAWVPA
Ga0137367_100691622	3300012353	Vadose Zone Soil	MVEDLTKLKPKRLERRLEELARDALPCISAVASHADPEHGLTVALWIESQGRRDVRDLARVLQSEPGGHVSTGWSLLTPSRKHPQWRLLLHVDVDRPVLCSFVVRFDIADHPDDQLRLALPLLLAASGFALAFDGFPQPDEQVAWVPAPAAREGVIEVLAALNLPR*
Ga0137367_102950702	3300012353	Vadose Zone Soil	MVENLTNLKPKRLGRRLEDLSREALPCVSAVVSHGDPEHGLTVALWVESRGRRDVRDLTRVLESEPGGHVVTGWSLLSPSRKQPHWRLLLRVNFERPVRCAFVVRLDITDHPDDRLRLALPLLLAASGFALAFDGFPEPDKPVTWVPAPAVRDCVFEVLAAAGLPR*
Ga0137366_101658222	3300012354	Vadose Zone Soil	MVEDLTKLKPKRLGRRLEELARDALPCISAVASHADPEQGLTVALWIEARGRRDVRDLARVLQSEPGGHVSTGWSLLTPSRKHPQWRLLLHVDVDRPVLCSFVVRFDVADHPDDQLRLALPLLLAASGFALAFDGFPQPDEQVAWVPAPAAREGVVEVLAAVNLPR*
Ga0137369_103682852	3300012355	Vadose Zone Soil	MVENLTNLKPKRLGRRLEELSREALPCVSAVVSHGDPEHGLTVALWVESQGRRDVRDLTRVLESEPGGHVVTGWSLLSPSRKHPHWRLFLHVDVERPVLCSFVVRFDITDHPDDRLRLALPLLLAASGFALAFDGFPEPDKPVTWVPAPAVRDCVLEVLAAAGLPR*
Ga0137369_105845882	3300012355	Vadose Zone Soil	SAVASHADPEQGLTGALWIEAAGRRDVRDLARVLQSEPGGHASTGWSLLAPSRKYPHWRLLLHVDVDRPVLCSFVVRFDVADHPDDQLRLALPLLLAASGFALAFDGFPQPDDQVAWVPAPAAREGLVEVLAAVNLPR*
Ga0137369_108044051	3300012355	Vadose Zone Soil	VKSGTVNAILEDLTQLSPKRLERRLEQLAREALPCGSAIVFDGSPSEGLTVGLRVESEGRRDVLDLARVLEEEPGGHVFSAWALLAPSRGHPSWRLLLRVHIERPVLCSFVVRFDIADHPDDQLRLALPLILAADRFALAFDGPPEQDRPLVWVSAPAARDCVFEVLAAVGV*
Ga0137369_110566291	3300012355	Vadose Zone Soil	VGVVLEDLTTLPPKRLERRLEELARDALPCVSAAVFGGNPEEGLTVGRWVESQDRRDVLDLARVLESEPGGHVATGWSLLSPKRGQPSWRLLLRVHFERPVQCSFVVRLDVRDHPSDPLRAVLPLILAAARFALAFDGPPEQDRPLVWVSAPAARDCVFEVLAAV
Ga0137368_100825672	3300012358	Vadose Zone Soil	MVEDLTKLKPKRLERRLEELARDALPCISAVASHADPEHGLTVALWIESQGRRDVRDLARVLQSEPGGHVSTGWSLLTPSRKHPQWRLLLHVDVDRPVLCSFVVRFDIADHPDDQLGLALPLLLAASGFALAFDGFPQPDEQVAWVPAPAAREGVTEVLAALNLPR*
Ga0137368_103114641	3300012358	Vadose Zone Soil	MVEDLTKLKPKRLGRRLEELARDALPCISAVASHADPEQGLTVALWIEARGRRDVRDLARVLQSEPGGHVSTGWSLLTPSRKHPQWRLLLHVDVDRPVLCSFVVRFDIADHPDDQLRLALPLLLAASGFALAFDGFPQPDEQVAWVPAPAAREG
Ga0137368_104437171	3300012358	Vadose Zone Soil	LGRRLEELSREALPCVSAVVSHGDPEHGLTVALWVESRGRRDVRDLTRVLESEPGGHVVTGWSLLSPSRKQPHWRLLLRVNFERPVRCAFVVRLDITDHPDDRLRLALPLLLAASGFALAFDGFPEPDKPVTWVPAPAVRDCVFEVLAAAGLPR*
Ga0137368_105100891	3300012358	Vadose Zone Soil	MVEDLTKLKPKRLGRRLEQLSRNALPCVSAIASHADPEHGLTVALWVESQGRRDARDLARVLQSEPGGHVTTGWSLLSPSRKHPQWRLLLHIDFERPVLCSFVVRFDVTDHPNDQLRLALPLILAASGFAIAFDGFPQTDEPVIWVSAPAAREGVLEVLAAVNLPR*
Ga0137375_103025152	3300012360	Vadose Zone Soil	MTMVEDLTKLKPKRLGRRLEELARNALPCVSAVVSHGDPEHGLTVALWVESRGRRDVRDLTRVLESEPGGHVVTGWSLLSPSRKHPHWRLFLHVDVERPVLCSFVVRFDITDHPDDRLRLALPLLLAASGFALAFDGFPEPDKPVTWVPAPAVRDCVLEVLAAAGLPR*
Ga0137375_104892802	3300012360	Vadose Zone Soil	MVEDLTKLKPKRLGRRLEELARDALPCISAVASHADPEQGLTVALWIEARGRRDVRDLARVLQSEPGGHVSTGWSLLTPSRKHPQWRLLLHVDVDRPVLCSFVVRFDIADHPDDQLRLALPLLLAASGFALAFDGFPQPDEQVAWVPAPAAREGVIEVLAALNLPR*
Ga0137375_111151221	3300012360	Vadose Zone Soil	VKSILEDLTNLPPKRLARRLDELARGALPCVDVNVFDGNPGDGLTVGLWVEAEGRRDVLDLARVLETEPGGHVSTGWSLLAPSRRHPYGRLLLRVHFERPVQCSFVVRFDVRDQPNDPMRAALPLLVAASGFALGFNGFPATERPVTWIPAPSARGCIFELLTSVGV*
Ga0137373_101893742	3300012532	Vadose Zone Soil	MVEDLTKLKPKRLGRRLEELARNALPCISAVASHADPEQGLTVALWIEARGRRDVRDLARVLDSEPGGHVSSGWSMLAPSRKYPHWRLLLHVDVDRPVLCSFVVRFDVADHPDDQLRLALPLLLAASGFALAFDGFPQPDEQVAWVPAPAAREGVVEVLAAVNLPR*
Ga0137373_109878301	3300012532	Vadose Zone Soil	MVEDLTNLKPKRLVRRLEELSREALPCVSAVVSHGDPERGLTVALWVESHGRRDVRDLTRVLESEPGGHVATGWSLLSPSRKHPHWRLLLHVDVERPVLCSFVVRFDITDHPDDRLRLALPLLLAASGFALAFDGFPEPDKPVTWVPAPAVRDCVFEVLAAAGLPR*
Ga0136615_102056401	3300012678	Polar Desert Sand	VRGILEDLTKLPPKRLERKLEELAREALPCVSVTVFDGSPADGLTVGLQVESEGRRDVLDLARVLEIEPDGYVVSAWALLTPNRKHPHWRLLLRVEFERPVRCSFAVRLDVRDQPSDPLRATLPLILAAARFALAADGSPDRDRERPLVWVAAPAARERVFELLGAVGIA*
Ga0136615_105138951	3300012678	Polar Desert Sand	EQLAREALPCVGVTVFDGNPTDGLTVGLRVDSHSRRDVLDLARVLEIEPDGFVESAWALLAPTRQHPPWRLLLRVEFERPVLCSFVVRFDVRDHPSDPLRAALPLLLAADWFALAFAGTVDPDRALLWVAAPAARECVLEVLTSVGH*
Ga0136616_103728931	3300012679	Polar Desert Sand	MVEDLTKLSPKRLGRRLKELAREGLPCASATVFDGSPQEGLTVGLRVESQGRRDVLDLARVLETEPNGYAFSAWALLSPSRPHPYWRLLLRVQFERPVKCSFVVRFDVREHPSDPLRAALPLLLATDRFALAFNRAPEAEQPLVWVTAP
Ga0136614_100725372	3300012684	Polar Desert Sand	MVEDLTRLSPKRLGRRLEELAREGLPCASATVFDGSPQEGLTVGLRVESQGRPDVRDLARVLEIEPNGYAFSAWALLSPNPEHSYWRLLLRVQFERPVSCSFVVRFDVREHPSDPLRAALPLLLASDRFALAFDGAPDPNRPLLWVAAPTARECVLEILTAVGI*
Ga0164241_100763321	3300012943	Soil	MAESLTQLKPKRLSRRLEELARNALPCVSAVVSHGDPEHGLTVALWVESQGRRDVLDLARVLESEPGGHVETGWSLLSPSRRHPKWRLLLHVSFERPVLCDFVIRFDITEHPSDELRLILPLVLAANGFALAFDGFGESDKPVVWVPAPGRRDCVFELLDQLGP*
Ga0120172_11663501	3300013765	Permafrost	SVMSILEDLTNLPPKRLARRLDELAGDALPCVDVNVFDGNPADGLTVGLWVEAEGRRDVLDLARVLETEPGGHVSTGWSLLAPSRRHLYWRLLLRVHFERPVQCSFVIRFDVRDQANDPKRGALPLLLAASGFALGFNGFPATERPVTCIPAPSTRDCVLEILTAVGV*
Ga0075311_10848122	3300014259	Natural And Restored Wetlands	VNAILEDLTQLSPKRLERRLEQLAREALPCGSAIVFDGSPSEGLTVGLRVESEGRRDVLDLARVLEEEPGGHVFSAWALLAPSRGHPSWRLLLRVHFERPVKCSFVVRLDVRDHASDPLRAALPLILAADRFALAFDGPREQDRPVLWVSAPAARECVLEALVALGIS*
Ga0132258_123409912	3300015371	Arabidopsis Rhizosphere	MVEDLTKLKPKRLGRRLEELASDALPCISAVASHADPEQGLTVALWIEARGRRDVRDLARVLQSEPGGHVSTGWSLLTPSRKHPQWRLLLHVDVDRPVLCFFVVRFDIADHPDDQLRLALPLLLAASGFALAFDGFPQPDERVAWIPAPAAREGVIEVLAAVNLSK*
Ga0180121_100866511	3300017695	Polar Desert Sand	VRGILEDLTKLPPKRLERKLEELARGALPCVSVTVFDGNPTDGLTVGLQVESQGRRDVLDLARVLEIEPDGFVVSAWALLTPSRKHPHWRLLLRVEFERPVRCSFGVRLDVSDQPSDPLRATLPLILAADRFALAFNGSPDRDRPLVWVAAPAARE
Ga0183260_100141933	3300017787	Polar Desert Sand	MVEDLTRLSPKRLGRRLEELAREGLPCASATVFDGSPHEGLTVGLRVESQGRRDVLDLARVLEIEPNGYAFSAWALLSPSREHPYRRLLLRVQFERPVSCSFVVRFDVRDHSSDPLRAALPLLLASDRFALAFDRVPEPDQPLVWVSAPAARECVLEVLTDAGI
Ga0183260_100581364	3300017787	Polar Desert Sand	VRGMLEDLTKLPPKRLERKLEELAREALPCVAVTVVDGNPSDGLTVGLQVESQGRRDVVDLARVLEIEPDGYVVSAWALLTPNRKHPHWRLLLRVEFERPARCSFAVRLDVGDRPSDPLRATLPLILAADRFALAFDGSPDRDRPRVWVAAPAARECVLEVLAAVGI
Ga0183260_100717153	3300017787	Polar Desert Sand	VRGILEDLTKLPPKRLERKLEELACGALPCVAVTVFDGNPSDGLTVGLHVESQGRRDVLDLARVLEIEPDGYVVSAWALLTPSRKHPHWRLLLRVEFERPVRCSFAVRLDVRDQPSDPLRATLPLILAAARFALAADGSPDRDRERPLVWVAAPAARERVFELLAAVGIA
Ga0183260_101421453	3300017787	Polar Desert Sand	VRGILEDLTKLPPKHLERKLEELAREALPCVSVTVFDGNPVDGLTVGLQVESQGRRDVLDLARVLEIEPDGFVVSAWALLTPSRKHPHWRLLLRIEFERPVRCSFAVRLDVGDEPRNPLRTALPLILAAGRFALAFDRAPVQDRPLVWVAAPAARECVFDVLAAVGI
Ga0183260_103247962	3300017787	Polar Desert Sand	VRGMLEDLTKLPPKRLERKLEELAREALPCVSVTVFDGNPADGLTVGLQVESQGRRDVLDLARVLEIEPDGYVVSAWALLTPSRKHPHWRLLLRVEFERPVRCSFAVRLDISDQQSDPLLTTLPLVLAAARFALAFDGSPDRDRPLVWVAAPAARECVLEVFVAVGI
Ga0183260_106125231	3300017787	Polar Desert Sand	VRGILEDLTQLPPKRLERKLEELAREALPCVSVTVFDGNPADGLTVGLHVESQGRRDVLDLARVLEIEPDGYVASAWALLTPSRKHPHWRLLLRAEFERPVRCSFAVRLDVRDQPSDPLRATLPLILAADRFALAFDGSPDRDRALIWIAAPAARECVFEVLTAV
Ga0183260_107510571	3300017787	Polar Desert Sand	VRDILEDLTKLPPKRLERKLEELAREALPCVSVTALDANPADGLTVGLQVESHGRRNVLDLARVLEIEPDGYVVSAWAFLTPGRKHPYWRLLLRVDFERPVRCSFAVRLDIRDQPSDPLRAALPLILAADRFALAFDGTPERDRQLVWVAAPAARECVFE
Ga0136617_100621132	3300017789	Polar Desert Sand	VRGILEDLTKLPPKRLERKLEELAREALPCVAVTVFDGNPSDGLTVGLHVESQGRRDVLDLARVLEIEPDGYVVSAWALLTPGRKYPYWRLLLRVDFERPVRCSFAVRLDVRDRPSDPLRITLPLILAADRFALAFDGSPDRERPLVWVAAPAARECVFEVLAAVCIA
Ga0136617_102654462	3300017789	Polar Desert Sand	VTVFDGNPSDGLTVGLHVESQGRRDVLDLARVLEIEPDGYVVSAWALLTPSRKHPHWRLLLRVEFERPVRCSFAVRLDVRDQPSDPLRATLPLILAAARFALAADGSPDRDRERPLVWVAAPAARERVFELLAAVGIA
Ga0136617_110090302	3300017789	Polar Desert Sand	VRAILEDLTQLPPKRLERRLEQFSREALPCVAVTVLDGNPTDGLTVGLRVESRGRRDVLDLARVLEIEPNGFVVSAWALLTPSRQHPPWRLLLRVEFERPVGCSFVVRMDIRDHPSDPLRAALPLLLAADRFALAFDGTVDPDRALLWVAAPAARECVLEVLNSVYG
Ga0184609_104166711	3300018076	Groundwater Sediment	LEDLTQLSPKRLERRLEQLAREGLPCGSAIVFDGSPSEGLTVGLRVESEGRRDVLDLARVLEEEPGGHVFSAWALLAPSRGHAFWRLLLRVHFERPVQCSFVVRLDVRAHPSDPLRAALPLILAADRFALAFDGPPEQDRPLVWVSAPAARECVLEVLADVGIA
Ga0187892_103466541	3300019458	Bio-Ooze	MVKIMVESLTQLKPKRLNRRLEELARNALPCVSAVVSHGDPEHGLTVALWVESQGRRDVLDLARVLESEPGGHVETGWSLLSPSRRHPEWRLLLHVSFERPVLCDFVIRFDITEHPSDELRGALPLLLAASGFALAFDGSPSSNRPITWVPAPTARDCVFEGLAAVGR
Ga0193751_10963872	3300019888	Soil	MSILEDLTRLTAKRLERRLEELAREALPCVSAVAFEASPEEGLTVGLWVESQGRRDVLDLARVLETERGGHVATGWSLLSPSRPHPYSRLLLRVHFERPVLCSFAVRFDIRDDASDAMRSSLPLLLAASGFALAFDQLPQTGQPLAWIPAPAVRDCVYDVLGAAGA
Ga0209474_104799371	3300026550	Soil	RATAYWCTGTCRPHESHCGRGSATVGSGGSQQAPPRNLSEWRGNVMSILEDLTRLTAKRLERRLEELAREALPCVSAVAFEASPEEGLTVGLWVESQGRRDVRDLARVLETEPGGHVATGWSLLSPSRPHPYWRLLLRVHFERPVLCSFVVRFDVRDGASDAMRSALPLLLAASGFALAFDQLPQTGRPLAWIPAPAVRDCMYEVLGAG
Ga0208736_10518512	3300027618	Polar Desert	RLEELACEGLPCASAMVFDGSPQEGLTVGLRVESQGRPDVRDLARVLEIEPNGYAFSAWALLSPNPEHSYWRLLLRVQFERPVSCSFVVRFDVREHPSDPLRAALPLLLASDRFALAFDGAPDPNRPLLWVAAPTARECVLEILTAVGI
Ga0208612_11370571	3300027638	Polar Desert	MVPRAATATTGGGGNVRGILEDLTKLPPKRLERKLEELAREALPCVAVTVFDGNPSDGLTVGLHVESQGRRDVLDLARVLEIEPDGYVVSAWALLTPSRKHPHWRLLLRVEFERPVRCSFAVRLDVRDQPSDPLRATLPLILAAARFALAADGSPDRDRERPLVWVAAPAARERVFELL
Ga0209810_11020702	3300027773	Surface Soil	VRGILEDLTNLPPKRLARRLDELAREALPCLATSVFDGNPQDGLTVGLRVESEGRRDVLDLARVLETEPNGHVSAGWSLLSPSRRHPSWRLLLRVHFERPVTCDFAIRFDVRDHPSDAMRAALPLLLAASGFALSFDRNPAPGRPLIWVEAPAARDCVFEALTAVGI
Ga0209853_10447692	3300027961	Groundwater Sand	VGSVLEDLTKLAPKPLERRLEQLAREALPCISANVFDGNPQDGLTVGLWVESQGRRDVLDLARVLEGEPGGHVATGWSLLSPKRGHPSSRVLLRVHFERPVKCSFVVRFDVGDDPSDPMRAVLPLLLAANGFALGFDGFPDAERPIAWVMAPSSRECVFEVLTTRVV
Ga0307278_1000000962	3300028878	Soil	VESDTVNAILEDLTQLSPKRLERRLEQLAREALPCGSAIVFDGSPREGLTVGLRVESEGRRDVLDLARVLEEEPGGQVFSAWALLAPSRGHPSWRLLLRIHFERPVKCSFIVRLDVRDHPSDPLRAALPLILAADRFALAFDGPPEHDRPLVWVYAPAARECVLEVLAAVGIA
Ga0268386_100580642	3300030619	Soil	VLEDLTTLAPKRLERRLEQLAHDALPCVSAMVLGGNPQEGLTVGLWVESQGRRDVLDLARVLETEPGGHVATGWSLLSPKRGHPSWRLLLRVHFERPVKCSFVVQFEIRDDVHDLMRTALPLFLAASGFALGFDGFPDAERPIAWIPAPTSRDCVFEALGATGV
Ga0299914_107347122	3300031228	Soil	VTAILEDLTQLSPKRLERRLEQLAREALPCRSAIVFDGSPSEGLTVGLSVESEGRRDVLDLARVLEEEPGGHVFSAWALLAPSRGHPSWRLLLRVHFERPVKCSFVVHLDVRDHPSDPLHAALPLILAADRFALAFDGPPEQDRPLVWVSAPAARDCVFEVLAAVGIADTTAA
Ga0299914_112321381	3300031228	Soil	GCANSHTPEPASSSRRRANVGVVLEDLTSLAPKRLERRLEQLAHDALPCVSAIVFSGDPQEGLTVGLWVESRGRRDVLDLARVVETEPGGHVATGWSLLSPKRGHPSWRLLLRVHFERPVKCSFVVQFEIRDDVHDLMRTALPLFLAASGFALGFDGFPDAERPIAWIPAPTSRDCVFEALGATGV
Ga0299914_114895701	3300031228	Soil	STTEGSGRSGPGPACPSASVRAATVTTILEDLANLSPKRLERRLEQLAREALPCGSATVFSGDPEEGLTAGLRVESQGRRDLLDLARVLEIEPDGYVFSAWALLAPNRSHPYHRLLLRIHFERPVRCSFVVRLDVRDHSSDPLRASLPLILAAERFVLALDSPPGPDRPLVWVSA
Ga0272433_1000024826	3300031450	Rock	MVEDLTSLSPKRLGRRLEKLAREGLPCASATVFDGSPQEGLTVGLQVESQGRRDVLDLARVLEIEPNGYAFSAWALLSPSREHLYWRLLLRVQFERPVICSFVVRFDVRDHPSDAMRGALPLLLASDRFALAFGGAPDPDRPLLWVASPTARECVLEVLTAVGI
Ga0335085_1000224715	3300032770	Soil	MSILEDLTRLTAKRLERRLEELAGEALPCVSAVPFEANPEEGLTVGLWIESQGRRDVLDLARVLETEPGGHVATGWSLLSPSRPHPYWRLLLRVHFERPVLCSFVVRFDIRDDASDAMRRSLPLLLAASGFALAFDRLPEADRPVAWVPAPAAHGCVYEVLGGASA
Ga0335078_1000672920	3300032805	Soil	VSLSEWRGNVNSIVEDLTRLSPKRLERRLEELAGEAMPCVSVVPLEANPGDGLTVGLWVESEGRRDVLDLARVLESEPGGHVVTGWSLLSPSRRHRYSRLLLRVHFERPVLCSFIVRFDVHDHQNDEMRLALPLLLAASGFALAFDRLPEAERPLTWVPAPTARECLYDVMGSTTT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F104617

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with PDB biological assemblies

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences