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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F104751 |
| Family Type | Metagenome |
| Number of Sequences | 100 |
| Average Sequence Length | 64 residues |
| Representative Sequence | MSFQTIFDIQQSMTVNNRRMVGQQVARSGYITVAQYLTAVPWVFTITPHAYLYYPQVRDVIQ |
| Number of Associated Samples | 88 |
| Number of Associated Scaffolds | 100 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 100.00 % |
| % of genes near scaffold ends (potentially truncated) | 17.00 % |
| % of genes from short scaffolds (< 2000 bps) | 14.00 % |
| Associated GOLD sequencing projects | 85 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.17 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (82.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (17.000 % of family members) |
| Environment Ontology (ENVO) | Unclassified (65.000 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (63.000 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 23.33% Coil/Unstructured: 76.67% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.17 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 100 Family Scaffolds |
|---|---|---|
| PF09718 | Tape_meas_lam_C | 68.00 |
| PF07460 | NUMOD3 | 1.00 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 82.00 % |
| All Organisms | root | All Organisms | 18.00 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300001850|RCM37_1054746 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 1459 | Open in IMG/M |
| 3300003809|Ga0007869_1000295 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 8322 | Open in IMG/M |
| 3300004690|Ga0065175_1020931 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 521 | Open in IMG/M |
| 3300006121|Ga0007824_1001669 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 5548 | Open in IMG/M |
| 3300006802|Ga0070749_10453833 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 702 | Open in IMG/M |
| 3300008266|Ga0114363_1153475 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 761 | Open in IMG/M |
| 3300008448|Ga0114876_1132962 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 935 | Open in IMG/M |
| 3300009159|Ga0114978_10347187 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 898 | Open in IMG/M |
| 3300009160|Ga0114981_10534027 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 626 | Open in IMG/M |
| 3300020548|Ga0208856_1023493 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 883 | Open in IMG/M |
| 3300021138|Ga0214164_1111399 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 503 | Open in IMG/M |
| 3300021952|Ga0213921_1001529 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 5930 | Open in IMG/M |
| 3300027782|Ga0209500_10200338 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 901 | Open in IMG/M |
| 3300027797|Ga0209107_10002868 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 9580 | Open in IMG/M |
| 3300031951|Ga0315904_11278834 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 557 | Open in IMG/M |
| 3300034106|Ga0335036_0553726 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 707 | Open in IMG/M |
| 3300034118|Ga0335053_0189068 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 1361 | Open in IMG/M |
| 3300034166|Ga0335016_0474223 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 711 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Freshwater | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater | 17.00% |
| Freshwater Lake | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake | 12.00% |
| Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 11.00% |
| Freshwater | Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater | 7.00% |
| Freshwater | Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater | 6.00% |
| Freshwater Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake | 6.00% |
| Freshwater Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake | 5.00% |
| Freshwater | Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater | 5.00% |
| Freshwater, Plankton | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton | 4.00% |
| Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 4.00% |
| Marine Plankton | Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton | 3.00% |
| Freshwater | Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater | 3.00% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment | 2.00% |
| Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine | 2.00% |
| Estuarine Water | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water | 2.00% |
| Deep Subsurface | Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface | 2.00% |
| Freshwater And Sediment | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment | 1.00% |
| Freshwater And Sediment | Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment | 1.00% |
| Freshwater Lake Sediment | Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment | 1.00% |
| Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake | 1.00% |
| Freshwater | Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater | 1.00% |
| Freshwater | Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater | 1.00% |
| Freshwater | Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater | 1.00% |
| Estuarine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine | 1.00% |
| Deep Subsurface Sediment | Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment | 1.00% |
| Visualization |
|---|
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000203 | Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion | Environmental | Open in IMG/M |
| 3300001836 | Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM27, ROCA_DNA191_0.2um_MCP-N_C_3a | Environmental | Open in IMG/M |
| 3300001848 | Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM47, ROCA_DNA265_0.2um_TAP-S_3a | Environmental | Open in IMG/M |
| 3300001850 | Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM37, ROCA_DNA234_0.2um_Ob_C_2a | Environmental | Open in IMG/M |
| 3300002161 | Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA | Environmental | Open in IMG/M |
| 3300002408 | Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123) | Environmental | Open in IMG/M |
| 3300003394 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN | Environmental | Open in IMG/M |
| 3300003809 | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH03Jun09 | Environmental | Open in IMG/M |
| 3300003813 | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jun09 | Environmental | Open in IMG/M |
| 3300003852 | Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB | Environmental | Open in IMG/M |
| 3300004096 | Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2) | Environmental | Open in IMG/M |
| 3300004282 | Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment | Environmental | Open in IMG/M |
| 3300004685 | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul08 (version 2) | Environmental | Open in IMG/M |
| 3300004690 | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Jul07 (version 2) | Environmental | Open in IMG/M |
| 3300005527 | Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG | Environmental | Open in IMG/M |
| 3300005805 | Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA | Environmental | Open in IMG/M |
| 3300006101 | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE15Jun09 | Environmental | Open in IMG/M |
| 3300006106 | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul07 | Environmental | Open in IMG/M |
| 3300006110 | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Jun09 | Environmental | Open in IMG/M |
| 3300006121 | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE05Oct08 | Environmental | Open in IMG/M |
| 3300006802 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 | Environmental | Open in IMG/M |
| 3300006805 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA | Environmental | Open in IMG/M |
| 3300006875 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA | Environmental | Open in IMG/M |
| 3300008110 | Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA | Environmental | Open in IMG/M |
| 3300008266 | Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA | Environmental | Open in IMG/M |
| 3300008448 | Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs | Environmental | Open in IMG/M |
| 3300009159 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG | Environmental | Open in IMG/M |
| 3300009160 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG | Environmental | Open in IMG/M |
| 3300010374 | Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S-1-Day17 | Environmental | Open in IMG/M |
| 3300011268 | Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555 | Environmental | Open in IMG/M |
| 3300013005 | Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG | Environmental | Open in IMG/M |
| 3300013094 | Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES058 metaG | Environmental | Open in IMG/M |
| 3300017722 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N | Environmental | Open in IMG/M |
| 3300017747 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N | Environmental | Open in IMG/M |
| 3300017777 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N | Environmental | Open in IMG/M |
| 3300017785 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N | Environmental | Open in IMG/M |
| 3300019784 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D | Environmental | Open in IMG/M |
| 3300020190 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015013 Mahale N5 surface | Environmental | Open in IMG/M |
| 3300020196 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015031 Kigoma Deep Cast 0m | Environmental | Open in IMG/M |
| 3300020548 | Freshwater microbial communities from Lake Mendota, WI - 13JUL2012 deep hole epilimnion (SPAdes) | Environmental | Open in IMG/M |
| 3300020694 | Freshwater microbial communities from Trout Bog Lake, WI - 09SEP2008 epilimnion | Environmental | Open in IMG/M |
| 3300020728 | Freshwater microbial communities from Trout Bog Lake, WI - 03JUN2009 epilimnion | Environmental | Open in IMG/M |
| 3300020732 | Freshwater microbial communities from Trout Bog Lake, WI - 29MAY2009 epilimnion | Environmental | Open in IMG/M |
| 3300021092 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015021 Mahale Deep Cast 10m | Environmental | Open in IMG/M |
| 3300021125 | Freshwater microbial communities from Trout Bog Lake, WI - 11AUG2009 epilimnion | Environmental | Open in IMG/M |
| 3300021138 | Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion | Environmental | Open in IMG/M |
| 3300021424 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015009 Mahale N1 surface | Environmental | Open in IMG/M |
| 3300021952 | Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17 MG | Environmental | Open in IMG/M |
| 3300021962 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D | Environmental | Open in IMG/M |
| 3300021963 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D | Environmental | Open in IMG/M |
| 3300022179 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N | Environmental | Open in IMG/M |
| 3300022407 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D | Environmental | Open in IMG/M |
| 3300024346 | Whole water sample coassembly | Environmental | Open in IMG/M |
| 3300024495 | Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_8d | Environmental | Open in IMG/M |
| 3300025353 | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH06Jun08 (SPAdes) | Environmental | Open in IMG/M |
| 3300025383 | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09 (SPAdes) | Environmental | Open in IMG/M |
| 3300025423 | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jun09 (SPAdes) | Environmental | Open in IMG/M |
| 3300025449 | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul08 (SPAdes) | Environmental | Open in IMG/M |
| 3300025466 | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07 (SPAdes) | Environmental | Open in IMG/M |
| 3300025648 | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09.1 (SPAdes) | Environmental | Open in IMG/M |
| 3300025779 | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun08 (SPAdes) | Environmental | Open in IMG/M |
| 3300026457 | Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepB_8h | Environmental | Open in IMG/M |
| 3300027193 | Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 (SPAdes) | Environmental | Open in IMG/M |
| 3300027492 | Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepA_8d | Environmental | Open in IMG/M |
| 3300027733 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027762 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 (SPAdes) | Environmental | Open in IMG/M |
| 3300027764 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes) | Environmental | Open in IMG/M |
| 3300027782 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027792 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes) | Environmental | Open in IMG/M |
| 3300027797 | Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes) | Environmental | Open in IMG/M |
| 3300027974 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG (SPAdes) | Environmental | Open in IMG/M |
| 3300028025 | Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC | Environmental | Open in IMG/M |
| 3300031759 | Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P | Environmental | Open in IMG/M |
| 3300031884 | Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18005 | Environmental | Open in IMG/M |
| 3300031951 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120 | Environmental | Open in IMG/M |
| 3300032093 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117 | Environmental | Open in IMG/M |
| 3300032560 | Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18009 | Environmental | Open in IMG/M |
| 3300032605 | Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025_13 | Environmental | Open in IMG/M |
| 3300032665 | Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18007 | Environmental | Open in IMG/M |
| 3300032722 | Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18027 | Environmental | Open in IMG/M |
| 3300034020 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2015-rr0055 | Environmental | Open in IMG/M |
| 3300034061 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028 | Environmental | Open in IMG/M |
| 3300034106 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131 | Environmental | Open in IMG/M |
| 3300034107 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133 | Environmental | Open in IMG/M |
| 3300034109 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME26Aug2009-rr0158 | Environmental | Open in IMG/M |
| 3300034118 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165 | Environmental | Open in IMG/M |
| 3300034166 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Sep2012-rr0079 | Environmental | Open in IMG/M |
| 3300034283 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| TB18AUG2009E_0365552 | 3300000203 | Freshwater | MAGFQNIVDIQQKMTVNNRRMIGQQVSRSGQVTVAQYLTSVPWVFTVVPHNFLYYPQTRDIIQAIDNLDRQLPDYIT |
| RCM27_10175722 | 3300001836 | Marine Plankton | MAGFQTIIDIQQKMNVNNRRVVGQQVSRGGQITTAQYLNAVPWVFTITPHNFLYYPQVREVIQSIDNAD |
| RCM47_11656331 | 3300001848 | Marine Plankton | MAGFQNIFEIQQKMTVNNRRVVGQQVARSGYITVAQYLTAVPWVFTVIPHN |
| RCM37_10547462 | 3300001850 | Marine Plankton | MAFQDIFEIQQSMTVNTRRVIGQQVARSGYITVAQYLTAVPWVFTVQPHSFLYYPTARQLIQ |
| JGI24766J26685_100086551 | 3300002161 | Freshwater And Sediment | MSFQSIVDIQQSMTVNNRRTVGQQVSRGGQIRTAQYLTAVPWVFTIVPHNYLYYPQ |
| B570J29032_1089114321 | 3300002408 | Freshwater | MSLQTIFDIQQSMTVNNRRTVGQQVSRSGQVRVAQYLTSVPWVFTVTPHNYLYYPQ |
| JGI25907J50239_10940792 | 3300003394 | Freshwater Lake | MSFQTIVDIQTSMTVNNRRTVGQQVSRSGQLRVAQYLTSVPWVFTVVPHNYLYYPQVRAVIQAIDNADRQIA |
| Ga0007869_10002951 | 3300003809 | Freshwater | MAGFQNIVEIQQKMNVNNRRTVGQQVSRSGQMTVAQYLTTVPWVFTITPHNFLYYPQVR |
| Ga0007879_10203282 | 3300003813 | Freshwater | MAGFQNIVDIQQKMTVNNRRMIGQQVSRSGQVTVAQYLTSVPWVFTIIPHNFLYYPQTRDIIQAIDN |
| Ga0031655_103983301 | 3300003852 | Freshwater Lake Sediment | MAGFQNIVEIQQKMNVNNRRTVGQQVSRSGQITVAQYLTTVPWVFTITPHNFLYYPQVRDVIQA |
| Ga0066177_100712161 | 3300004096 | Freshwater Lake | MSFQTIFEIQQSMNVQNRRMIGQQVTRAGYMTVAQYLTAVPWMFTVTPHNYLYY |
| Ga0066599_1003369041 | 3300004282 | Freshwater | MSFQTIFSIQQSMTVNNRRTVGQQVARSGYITVAQYLTAVPWVFTIQPHAYLYYPQVRDVIQSI |
| Ga0065177_10185862 | 3300004685 | Freshwater | MAGFQNIVDIQQKMTVNNRRMIGQQVSRSGQVTVAQYLTSVPWVFTIVPHNFLYY |
| Ga0065175_10209312 | 3300004690 | Freshwater | MAGFQNIVDIQQKMTVNNRRTVGQQVSRSGQMTVAQYLTSVPWVFTIVPHNFLYYPQVRNIIQAIDNLDRQLPDYI |
| Ga0068876_101803932 | 3300005527 | Freshwater Lake | MSFQSIVDIQQSMTVNNRRMVGQQTSRGGQIRTAQYLTAVPWVFTIVPHNYLYYPQVRDVIQTIDNL |
| Ga0079957_13077441 | 3300005805 | Lake | MSFQTILDISQSITVNNRRMVGQQYSRSGQVRTALYVTAVPWVFTVKPHSYLYYPQVRDVIQTIDN |
| Ga0007810_10920592 | 3300006101 | Freshwater | MAGFQNIVDIQQKMTVNNRRMIGQQVSRSGQVTVAQYLTSVPWVFTIIPHNFLYYPQTRDIIQAIDNLDR |
| Ga0007833_10419781 | 3300006106 | Freshwater | MAGFQNIVDIQQKMTVNNRRTVGQQVSRSGQMTVAQYLTSVPWVFTIVPHNFLYYPQVRDIIQAIDNLDRQLPDY |
| Ga0007871_10029276 | 3300006110 | Freshwater | MAGFQNIVEIQQKMNVNNRRTVGQQVSRSGQMTVAQYLTTVPWVFTITPHNFLYYPQVRNVIQAIDNLDRQL |
| Ga0007824_100166911 | 3300006121 | Freshwater | MAGFQNIVDIQQKMTVNNRRMIGQQVSRSGQVTVAQYLTSVPWVFTVVPHNFLYYPQVRDIIQAIDNLDRQLPDYITF |
| Ga0070749_104111572 | 3300006802 | Aqueous | MSFQTIFEIQQSMTVNNRRTVGQQVARSGYITVAQYLTAVPWVFTVVPHNYLF |
| Ga0070749_104538332 | 3300006802 | Aqueous | MSFQTIVDIQQSMTVNNRRTVGQQVTRGGQIRTAQYLTSVPWVFTIVPHNYLYYPQVRDVIQTIDNLDRQTAANI |
| Ga0075464_106484932 | 3300006805 | Aqueous | MSGFQTIFEIQQSMTVNNRRTVGQQVSRSGQVRVAQYLTSVPWVFTVVPHNYLPYATSRDIIQTIDNLDRQLP |
| Ga0075473_100148175 | 3300006875 | Aqueous | MSFQTILDISQTITVNNRRMVGQQYSRSGQVRTALYVTSVPWVFTVKPHSFLYYPQVRDVIQ |
| Ga0114343_10302252 | 3300008110 | Freshwater, Plankton | MSFQTIFEIQQSMTVNNRRMVGQQVARSGYITVAQYLTAVPWVFTITPHAYLYYPQVRDV |
| Ga0114343_10916481 | 3300008110 | Freshwater, Plankton | MSFQTIFDIQQSMTVNNRRMVGQQVARSGYITVAQYLTAVPWVFTITPHAYLYYPQVRDVIQ |
| Ga0114343_10924822 | 3300008110 | Freshwater, Plankton | MSFQTIFDIQQSMTVNNRRMVGQQVARSGYITVAQYLTAVPWVFTITPHAYLYYPQVRDV |
| Ga0114363_11534752 | 3300008266 | Freshwater, Plankton | MSFQSIVDIQQSMTVNNRRMVGQQTSRGGQIRTAQYLTAVPWVFTIVPHNYLYYPQVRDVIQTIDNLDRQTAANI |
| Ga0114876_11329622 | 3300008448 | Freshwater Lake | MSFQTILNISQSITVNNRRMVGQQYSRSGQVRTAQYVTSVPWVFTVKPHAFLYYPQVRDVIQTIDNLDRQTAATI |
| Ga0114978_103471871 | 3300009159 | Freshwater Lake | MSFQTIIDISQNIEVNNRRTIGQQYSRSGQVRVAQYLTAVPWVFTVKPHNFLYYPQVRNVIQAIDNADRQIPELIN |
| Ga0114981_105340271 | 3300009160 | Freshwater Lake | MSFQKIIDIHQSISVNNRRTVGQQYSRSGQITVAQYTTTVPWIFTVRPHNYLYYPQVRDVIQSIDNSDRQNPQYIN |
| Ga0114986_10124562 | 3300010374 | Deep Subsurface | MSFQTIFDIQQSLTVNNRRTVGQQVSRSGQVRVAQYLTSVPWVFTVQPHNYLYYPQVRNVIQAIDNK |
| Ga0114986_10592171 | 3300010374 | Deep Subsurface | MSFQTIFNIQQSMTVNNRRMVGQQVARSGYVTVAQYLTAVPWVFTVTPHSYLY |
| Ga0151620_12580611 | 3300011268 | Freshwater | MSLQTIFDIQQSMTVNNRRTVGQQVSRSGQVRVAQYLTSVPWVFTVTPHNYLYYPQVRNVIQAIEQQRPPVA* |
| Ga0164292_107072311 | 3300013005 | Freshwater | MSFQTIFEIQQSMSVNNRRMVGQQVARSGYITVAQYLTAVPWVFTIQPHAYLYYPQVRDIIQTIDIRDRQLPEQ |
| Ga0164297_101991562 | 3300013094 | Freshwater | MAGFQNIVDIQQKMTVNNRRMIGQQVSRSGQVTVAQYLTSVPWVFTIVPHNFLY |
| Ga0181347_11316752 | 3300017722 | Freshwater Lake | MSFQTIFEIQQSMTVNNRRMVGQQVARSGYITVAQYLTAVPWVFTITPHAYLYYPQVRDIIQSIDNK |
| Ga0181352_11768842 | 3300017747 | Freshwater Lake | MSFQTIFENQESMTVNNRRMVGQQVARSGFITVAQYLTAVPWVFTVTPNNYLYYPTARAIIQA |
| Ga0181357_11218802 | 3300017777 | Freshwater Lake | MSFQTIVDISQNIAVNNRRTIGQQYSRSGQVQVAQYLTTVPWVFTITPHEYLYYPQARAIIQSIDNSDR |
| Ga0181355_10876011 | 3300017785 | Freshwater Lake | MSFQTILDISQTITVNNRRMVGQQYSRSGQVRTALYVTSVPWVFTVKPHSFLYYPQVRDVIQTIDNLDR |
| Ga0181359_10979172 | 3300019784 | Freshwater Lake | MSFQTILNISQSITVNNRRMVGQQYSRSGQVRTAQYVTSVPWVFTVKPHAYLYYPQVRDVIQTIDNLDR |
| Ga0181359_11158102 | 3300019784 | Freshwater Lake | MSFQSIVDIQQSMTVNNRRTVGQQVSRGGQIRTAQYLTAVPWVFTIVPHNYLYYPQVRD |
| Ga0194118_101749341 | 3300020190 | Freshwater Lake | MSFQTILDISQYIQVNTRKTVGQQYSRSGQVRTAQYLTTQPWIFTVKPHAYLYYPQVRSVIQTI |
| Ga0194124_102194741 | 3300020196 | Freshwater Lake | MSFQTILDISQYIQVNTRKTVGQQYSRSGQVRTAQYLTAQPWIFTVKPHAYLYYPQVRSVIQTIDNLDRLT |
| Ga0194124_102737362 | 3300020196 | Freshwater Lake | MSFQTILNISQYIQVNTRKTVGQQYSRSGQVRTAEYLTAQPWIFTVKPHAYLYYPQVR |
| Ga0208856_10234932 | 3300020548 | Freshwater | MSLQTIFDIQQSMTVNNRRTVGQQVSRSGQVRVAQYLTSVPWVFTVTPHNYLYYPQVRNVIQAIDNKDRQLPESI |
| Ga0214197_10054901 | 3300020694 | Freshwater | MAGFQDIFEIQQKMTVNNRRLIAQQVSRSGQLRIAQYLTSVPWVFSVTPHNYLYYPTARAIIQQIDNLDR |
| Ga0214202_10009901 | 3300020728 | Freshwater | MAGFQNIVDIQQKMTVNNRRMIGQQVSRSGQVTVAQYLTSVPWVFTIIPHNFLYYPQTRDIIQA |
| Ga0214201_10198621 | 3300020732 | Freshwater | MAGFQNIVDIQQKMTVNNRRMIGQQVSRSGQVTVAQYLTSVPWVFTIIPHNFLYY |
| Ga0194122_103534691 | 3300021092 | Freshwater Lake | MSFQTILDISQYIQVNTRKTVGQQYSRSGQVRTAEYLTAQPWIFTVKPHAYLYYPQVRSVIQAIDNLD |
| Ga0214211_10213561 | 3300021125 | Freshwater | MAGFQNIVDIQQKMTVNNRRMIGQQVSRSGQVTVAQYLTSVPWVFTIVPHNFLYYPQTRDIIQA |
| Ga0214164_10280221 | 3300021138 | Freshwater | MAGFQNIVDIQQKMTVNNRRMIGQQVSRSGQVTVAQYLTSVPWVFTIVPHNFLYYPQTRDIIQAIDNLDRQLP |
| Ga0214164_11113991 | 3300021138 | Freshwater | MAFQQIFEIQQKMTVNNRRMVGQQVTRAGYMTTAQYLTAVPWQFTVVPHNFLYYPKVRNIIQGIDNLDRQLPETII |
| Ga0194117_103633842 | 3300021424 | Freshwater Lake | MSFQTILDISQYIQVNTRKTVGQQYSRSGQVRTAQYLTAQPWIFTVKPHAYLYYPQVRSVIQTIP |
| Ga0213921_10015291 | 3300021952 | Freshwater | MAYQTIFEIQQSMTVNNRRMIGQQVTRAGYVTVAQYLTAVPWVFTITPHNYLYYPQVRDVIQAID |
| Ga0222713_100312677 | 3300021962 | Estuarine Water | MMSFQTIFEIQQSMSVNNRRTVGQQVSRSGQIRTAQYLTSVPWVFTITPHNFLYYPQVRDVIQSIDN |
| Ga0222712_100621071 | 3300021963 | Estuarine Water | MSFQTIFDIQQSMTVNTRRTIGQMFSRSGQATVAQYLTTVPWVFTVTPHNYLYYPQV |
| Ga0181353_10773971 | 3300022179 | Freshwater Lake | MTVNNRRMVGQQVARSGYITVAQYLTAVPWVFTITPHAYLYYPQVRDIIQSIDN |
| Ga0181351_11670962 | 3300022407 | Freshwater Lake | MSFQTIFEIQQSMNVQNRRMIGQQVTRAGYMTVAQYLTAVPWMFTVTPHNYLYYPTARTIIQTIDNK |
| Ga0244775_100704971 | 3300024346 | Estuarine | MSFQTIFEISQSISVQNRRTVGQQVSRSGQVRVAEYLTSVPWSFTVRPHSYLYYPQVRGVIQAIDNKGR |
| Ga0255164_10101981 | 3300024495 | Freshwater | MSFQTIFEIQQFMTVNNRRVVGQQVARSGYITVAQYLTAVPWVFTVMPHNYLYYPQVRDIIQTID |
| Ga0208255_1253431 | 3300025353 | Freshwater | MAGFQDIFEIQQKMTVNNRRLIAQQVSRSGQLRIAQYLTSVPWVFSVTPHNYLYYPTARAIIQQIDNLDRQLPQT |
| Ga0208250_10309972 | 3300025383 | Freshwater | MAGFQNIVEIQQKMNVNNRRTVGQQVSRSGQMTVAQYLTTVPWVFTITPHN |
| Ga0208746_10283012 | 3300025423 | Freshwater | MAGFQNIVDIQQKMTVNNRRTVGQQVSRSGQMTVAQYLTSVPWVFTIVPHNFLYYPQVRDIIQAIDNLDRQLP |
| Ga0208106_10334982 | 3300025449 | Freshwater | MAGFQNIVDIQQKMTVNNRRMIGQQVSRSGQVTVAQYLTSVPWVFTIVPHNFLYYPQVR |
| Ga0208497_10618741 | 3300025466 | Freshwater | MAGFQNIVDIQQKMTVNNRRTVGQQVSRSGQMTVAQYLTSVPWVFTIVPHNFLYYPQVRDIIQ |
| Ga0208507_11653501 | 3300025648 | Freshwater | MAGFQNIVEIQQKMNVNNRRTVGQQVSRSGQMTVAQYLTTVPWVFTITPHNFLYYPQVRN |
| Ga0208869_10236232 | 3300025779 | Freshwater | MAGFQNIVEIQQKMNVNNRRTVGQQVSRSGQITVAQYLTTVPWVFTITHTIFCIIHKSEM |
| Ga0255160_10023241 | 3300026457 | Freshwater | MSFQTIFEIQQFMTVNNRRVVGQQVARSGYITVAQYLTAVPWVFTVMPHNYLYYPQVRDIIQTIDNKDRQ |
| Ga0208800_10091302 | 3300027193 | Estuarine | MSFQTIFDISQSIGVQNRRTIGQQVSRSGQVRVAQYLTSVPWQFTVKPHNYL |
| Ga0208800_10436581 | 3300027193 | Estuarine | MSFQTIFDIQQSMTVNNRRMVGQQVARSGYITVAQYLTAVPWVFTVTPHNYLYYPQVRDI |
| Ga0255093_11000912 | 3300027492 | Freshwater | MSFQTIFEIQQSMTVDNRRMVGQQVARSGYITVAQYMTAVPWVFTITPHDYLYYPQVRDV |
| Ga0209297_12756501 | 3300027733 | Freshwater Lake | MSFQTIFEIQQSMTVNNRRMVGQQVARSGYITVAQYLTAVPWVFTIQPHAYL |
| Ga0209288_101268951 | 3300027762 | Freshwater Sediment | MSFQTVFENQESMTVNNRRMVGQQVARSGFITVAQYLTAVPWVFTVTPNNFLYYP |
| Ga0209134_103084862 | 3300027764 | Freshwater Lake | MSFQTVFEIQQSMSVQNRRTVGQQVSRSGQMRVAQYLTAVPWVFTVTPHNYLYYPQV |
| Ga0209500_102003382 | 3300027782 | Freshwater Lake | MSFQTIIDISQNIEVNNRRTIGQQYSRSGQVRVAQYLTAVPWVFTVKPHNFLYYPQVRNVIQAIDNADRQIPELINF |
| Ga0209287_100447992 | 3300027792 | Freshwater Sediment | MSFQTIFENQESMTVNNRRMVGQQVARSGFITVAQYLTAVPWVFTVTPNNYLYYPTARAIIQAIDNKDRQL |
| Ga0209107_100028681 | 3300027797 | Freshwater And Sediment | MSFQTIFENQESMTVNNRRMVGQQVARSGFITVAQYLTAVPWVFTVSPNNYLY |
| Ga0209299_12675002 | 3300027974 | Freshwater Lake | MSFQTIFDIQQSMTVNNRRMVGQQVARSGYITVAQYLTAVPWVFTITPHAYLYYP |
| Ga0247723_10654911 | 3300028025 | Deep Subsurface Sediment | MSFQTIFEIQQSMTVNNRRVVGQQVARSGFITVAQYLTAVPWVFTIQPHAYLYYPQVRAI |
| Ga0316219_11259481 | 3300031759 | Freshwater | MAGFQNIVEIQQKMNVNNRRTVGQQVSRSGQMTVAQYLTTVPWVFTITPHNFLYYPQVRDVI |
| Ga0316220_11447022 | 3300031884 | Freshwater | MAGFQNIVDIQQKMTVNNRRMIGQQVSRSGQVTVAQYLTSVPWVFTIVPHNFLYYPQVRNIIQAIDNLD |
| Ga0315904_107352682 | 3300031951 | Freshwater | MSFQSIVDIQQSMTVNNRRTVGQQVSRGGQIRTAQYLTAVPWVFTIVPHNYLYYPQVRDVIQTID |
| Ga0315904_109074261 | 3300031951 | Freshwater | MSFQTIVDIQQSMTVNNRRTVGQQVTRGGQIRTAQYLTSVPWVFTIVPHNYLYYPQVRDV |
| Ga0315904_112788342 | 3300031951 | Freshwater | MSFQTILDISQTITVNNRRMVGQQYSRSGQVRTALYVTSVPWVFTVKPHSFLYYPQVRDVIQTIDNLDRQTAATITFSS |
| Ga0315902_100681017 | 3300032093 | Freshwater | MSFQTIFDIQQSMTVNNRRMVGQQVARSGYITVAQYLTAVPWVFTITPHAYLYYPQVRDVIQSIDNLDRQ |
| Ga0315902_105818291 | 3300032093 | Freshwater | MSFQTIVDIQQSMTVNNRRTVGQQVTRGGQIRTAQYLTSVPWVFTIVPHNYLYYPQV |
| Ga0316223_11503601 | 3300032560 | Freshwater | MAGFQNIVEIQQKMNVNNRRTVGQQVSRSGQMTVAQYLTTVPWVFTITPHNFLYYPQ |
| Ga0316232_12190761 | 3300032605 | Freshwater | MAGFQNIVEIQQKMNVNNRRTVGQQVSRSGQMTVAQYLTTVPWVFTITPHNFLY |
| Ga0316221_10993571 | 3300032665 | Freshwater | MAFQQIFEIQQKMTVNNRRMVGQQVTRAGYMTTAQYLTAVPWQFTVVPHNFLYYPKVRNIIQGIDNLD |
| Ga0316231_12369142 | 3300032722 | Freshwater | MAGFQNIVEIQQKMNVNNRRTVGQQVSRSGQITVAQYLTTVPWVFTITPHNFL |
| Ga0335002_0071543_2238_2432 | 3300034020 | Freshwater | MSFQTIVDIQQSMTVNNRRTIGQQVTRGGQIRTAQYLTSVPWVFTIVPHNYLYYPQVRDVIQTID |
| Ga0334987_0028326_1_192 | 3300034061 | Freshwater | MSFQTIFEIQQSMTVNNRRMVGQQVARSGYITVAQYITSVPWLFTIQPHAYLYYPQVRDVIQSI |
| Ga0335036_0151737_1466_1648 | 3300034106 | Freshwater | MSFQTIVDIQQSMTVQNRRMVGQQVTRGGQIRTAQYLNAVPWVFTIVPHNYLYYPQVRDV |
| Ga0335036_0553726_473_706 | 3300034106 | Freshwater | MSFQTILDISQSITVNNRRMVGQQYSRSGQVRTAQYVTAVPWVFTVKPHSFLYYPQVRDVIQTIDNLDRQTAATITFS |
| Ga0335037_0550236_1_165 | 3300034107 | Freshwater | MSFQTIFEIQQSMTVNNRRVVGQQVARSGYITVAQYLTAVPWVFTIQPHAYLYYP |
| Ga0335051_0553203_338_529 | 3300034109 | Freshwater | MSLQTIFDIQQSITVNNRRTVGQQVSRSGQVRVAQYLTSVPWVFTVTPHNYLYYPQVRNVIQAI |
| Ga0335053_0189068_1136_1360 | 3300034118 | Freshwater | MSFQTILNISQSITVNNRRMVGQQYSRSGQVRTAQYVTSVPWVFTVKPHAYLYYPQVRDVIQTIDNLDRQNAATI |
| Ga0335016_0474223_1_240 | 3300034166 | Freshwater | MSFQTILDISQTITVNNRRMVGQQYSRSGQVRTALYVTSVPWVFTVKPHSFLYYPQVRDVIQTIDNLDRQTAATITFSST |
| Ga0335007_0091175_3_209 | 3300034283 | Freshwater | MSLQTIFDIQQSMTVNNRRTVGQQVSRSGQVRVAQYLTSVPWVFTVTPHNYLYYPQVRNVIQAIDNKDR |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |