Metagenome Family F104843

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F104843
Family Type	Metagenome
Number of Sequences	100
Average Sequence Length	46 residues
Representative Sequence	MDSPIIPFQKKKKRNHDVAILLILLAVLLGTFLFVTVAVNLLLRSIPIP
Number of Associated Samples	78
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	74.00 %
% of genes near scaffold ends (potentially truncated)	40.00 %
% of genes from short scaffolds (< 2000 bps)	70.00 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (82.000 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (36.000 % of family members)
Environment Ontology (ENVO)	Unclassified (68.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.18% β-sheet: 0.00% Coil/Unstructured: 40.82%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF01037	AsnC_trans_reg	5.00
PF01243	Putative_PNPOx	5.00
PF00583	Acetyltransf_1	3.00
PF01546	Peptidase_M20	3.00
PF00589	Phage_integrase	3.00
PF00004	AAA	3.00
PF07687	M20_dimer	3.00
PF04930	FUN14	2.00
PF06745	ATPase	2.00
PF14528	LAGLIDADG_3	2.00
PF13091	PLDc_2	1.00
PF13432	TPR_16	1.00
PF01596	Methyltransf_3	1.00
PF00150	Cellulase	1.00
PF03600	CitMHS	1.00
PF03764	EFG_IV	1.00
PF13181	TPR_8	1.00
PF01053	Cys_Met_Meta_PP	1.00
PF00692	dUTPase	1.00
PF01022	HTH_5	1.00
PF09851	SHOCT	1.00
PF01428	zf-AN1	1.00
PF04185	Phosphoesterase	1.00
PF10604	Polyketide_cyc2	1.00
PF07732	Cu-oxidase_3	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG2383	Uncharacterized membrane protein, Fun14 family	Function unknown [S]	2.00
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	1.00
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	1.00
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	1.00
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	1.00
COG0480	Translation elongation factor EF-G, a GTPase	Translation, ribosomal structure and biogenesis [J]	1.00
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	1.00
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	1.00
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	1.00
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	1.00
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	1.00
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	1.00
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	1.00
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	1.00
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	1.00
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	1.00
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	1.00
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	1.00
COG3582	CDC48-associated ubiquitin-like protein CUZ1, contains AN1-type Zn-finger (protection from As/Sb toxicity)	Defense mechanisms [V]	1.00
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	1.00
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	1.00
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	1.00
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	1.00

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.00 %
Unclassified	root	N/A	10.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.00 %
Unclassified	root	N/A	10.00 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	82.00 %
Unclassified	root	N/A	10.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	8.00 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	44.00 %
Unclassified	root	N/A	10.00 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	5.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.00 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	1.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	41.00 %
Unclassified	root	N/A	10.00 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5.00 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	1.00 %
Crenarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	1.00 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1.00 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.00 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	41.00 %
Unclassified	root	N/A	10.00 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	5.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.00 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	1.00 %
unclassified Thermoproteota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota	1.00 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	1.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	41.00 %
Unclassified	root	N/A	10.00 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.00 %
Crenarchaeota archaeon 13_1_20CM_2_51_8	species	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	1.00 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	1.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.00 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	1.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	41.00 %
Unclassified	root	N/A	10.00 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.00 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	1.00 %
Crenarchaeota archaeon 13_1_20CM_2_51_8	species	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	1.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.00 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	1.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	41.00 %
Unclassified	root	N/A	10.00 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.00 %
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	1.00 %
Crenarchaeota archaeon 13_1_20CM_2_51_8	species	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	1.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.00 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	1.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	41.00 %
Unclassified	root	N/A	10.00 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.00 %
Candidatus Nitrososphaera evergladensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	1.00 %
Crenarchaeota archaeon 13_1_20CM_2_51_8	species	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	1.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.00 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	1.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10498464	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	501	Open in IMG/M
3300002558\|JGI25385J37094_10014252	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2850	Open in IMG/M
3300002560\|JGI25383J37093_10061675	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1185	Open in IMG/M
3300002911\|JGI25390J43892_10154202	Not Available	536	Open in IMG/M
3300002912\|JGI25386J43895_10000435	All Organisms → cellular organisms → Archaea	8253	Open in IMG/M
3300002916\|JGI25389J43894_1039016	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	817	Open in IMG/M
3300005166\|Ga0066674_10026989	All Organisms → cellular organisms → Archaea	2519	Open in IMG/M
3300005167\|Ga0066672_10076978	All Organisms → cellular organisms → Bacteria	1986	Open in IMG/M
3300005167\|Ga0066672_10513552	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	777	Open in IMG/M
3300005171\|Ga0066677_10359321	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	834	Open in IMG/M
3300005176\|Ga0066679_10950567	Not Available	538	Open in IMG/M
3300005178\|Ga0066688_10256232	Not Available	1121	Open in IMG/M
3300005180\|Ga0066685_10271080	All Organisms → cellular organisms → Archaea	1172	Open in IMG/M
3300005445\|Ga0070708_100209514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1826	Open in IMG/M
3300005445\|Ga0070708_101511936	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	625	Open in IMG/M
3300005451\|Ga0066681_10736009	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	598	Open in IMG/M
3300005536\|Ga0070697_100009717	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	7509	Open in IMG/M
3300005540\|Ga0066697_10051439	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2335	Open in IMG/M
3300005552\|Ga0066701_10582639	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	683	Open in IMG/M
3300005554\|Ga0066661_10036222	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2756	Open in IMG/M
3300005556\|Ga0066707_10548899	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	745	Open in IMG/M
3300005556\|Ga0066707_10823662	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	572	Open in IMG/M
3300005557\|Ga0066704_10136960	All Organisms → cellular organisms → Bacteria	1635	Open in IMG/M
3300005576\|Ga0066708_10352932	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	944	Open in IMG/M
3300005587\|Ga0066654_10055849	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1762	Open in IMG/M
3300006031\|Ga0066651_10756743	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	525	Open in IMG/M
3300006031\|Ga0066651_10760169	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	524	Open in IMG/M
3300006046\|Ga0066652_100772564	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	917	Open in IMG/M
3300006796\|Ga0066665_10489742	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1009	Open in IMG/M
3300006796\|Ga0066665_11045734	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	624	Open in IMG/M
3300006796\|Ga0066665_11327099	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	553	Open in IMG/M
3300006800\|Ga0066660_10038308	All Organisms → cellular organisms → Archaea	3022	Open in IMG/M
3300006800\|Ga0066660_10710812	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	824	Open in IMG/M
3300006806\|Ga0079220_10151006	All Organisms → cellular organisms → Archaea	1281	Open in IMG/M
3300007258\|Ga0099793_10056281	All Organisms → cellular organisms → Archaea	1749	Open in IMG/M
3300009012\|Ga0066710_102028116	All Organisms → cellular organisms → Archaea	851	Open in IMG/M
3300009012\|Ga0066710_103143006	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	637	Open in IMG/M
3300009012\|Ga0066710_103344959	All Organisms → cellular organisms → Archaea	611	Open in IMG/M
3300009137\|Ga0066709_101416037	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1010	Open in IMG/M
3300010303\|Ga0134082_10048300	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1629	Open in IMG/M
3300010323\|Ga0134086_10506071	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	501	Open in IMG/M
3300010325\|Ga0134064_10179812	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	748	Open in IMG/M
3300010329\|Ga0134111_10418269	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	576	Open in IMG/M
3300010333\|Ga0134080_10705586	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	501	Open in IMG/M
3300010335\|Ga0134063_10508988	All Organisms → cellular organisms → Archaea	603	Open in IMG/M
3300010335\|Ga0134063_10689733	Not Available	527	Open in IMG/M
3300010336\|Ga0134071_10063058	All Organisms → cellular organisms → Archaea	1706	Open in IMG/M
3300010337\|Ga0134062_10077133	All Organisms → cellular organisms → Archaea → TACK group	1399	Open in IMG/M
3300012199\|Ga0137383_10332145	All Organisms → cellular organisms → Archaea	1114	Open in IMG/M
3300012201\|Ga0137365_11184181	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	547	Open in IMG/M
3300012202\|Ga0137363_10068767	All Organisms → cellular organisms → Archaea	2599	Open in IMG/M
3300012203\|Ga0137399_10019565	Not Available	4395	Open in IMG/M
3300012204\|Ga0137374_10081098	All Organisms → cellular organisms → Archaea	3141	Open in IMG/M
3300012204\|Ga0137374_10383601	All Organisms → cellular organisms → Archaea	1123	Open in IMG/M
3300012206\|Ga0137380_10058302	All Organisms → cellular organisms → Archaea	3534	Open in IMG/M
3300012207\|Ga0137381_10036903	Not Available	3975	Open in IMG/M
3300012207\|Ga0137381_10037426	All Organisms → cellular organisms → Archaea	3949	Open in IMG/M
3300012207\|Ga0137381_10317442	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1357	Open in IMG/M
3300012209\|Ga0137379_11172994	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	674	Open in IMG/M
3300012210\|Ga0137378_10116896	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2459	Open in IMG/M
3300012210\|Ga0137378_11353048	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	627	Open in IMG/M
3300012211\|Ga0137377_10077540	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3121	Open in IMG/M
3300012349\|Ga0137387_10041148	All Organisms → cellular organisms → Archaea	3038	Open in IMG/M
3300012349\|Ga0137387_10087901	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2148	Open in IMG/M
3300012349\|Ga0137387_10266567	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	1236	Open in IMG/M
3300012356\|Ga0137371_10017984	All Organisms → cellular organisms → Archaea	5425	Open in IMG/M
3300012532\|Ga0137373_10986492	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	611	Open in IMG/M
3300012975\|Ga0134110_10373725	All Organisms → cellular organisms → Archaea	628	Open in IMG/M
3300012977\|Ga0134087_10074203	All Organisms → cellular organisms → Archaea	1384	Open in IMG/M
3300014150\|Ga0134081_10190197	All Organisms → cellular organisms → Archaea	693	Open in IMG/M
3300015241\|Ga0137418_10203150	All Organisms → cellular organisms → Archaea	1711	Open in IMG/M
3300017657\|Ga0134074_1229382	All Organisms → cellular organisms → Archaea	664	Open in IMG/M
3300017659\|Ga0134083_10312767	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	669	Open in IMG/M
3300018431\|Ga0066655_10040799	All Organisms → cellular organisms → Archaea	2335	Open in IMG/M
3300018431\|Ga0066655_11445415	Not Available	501	Open in IMG/M
3300018468\|Ga0066662_10015075	All Organisms → cellular organisms → Archaea	4161	Open in IMG/M
3300018468\|Ga0066662_10017414	Not Available	3934	Open in IMG/M
3300018482\|Ga0066669_11412560	All Organisms → cellular organisms → Archaea	631	Open in IMG/M
3300026277\|Ga0209350_1003021	All Organisms → cellular organisms → Archaea	6335	Open in IMG/M
3300026298\|Ga0209236_1004093	All Organisms → cellular organisms → Archaea	8907	Open in IMG/M
3300026298\|Ga0209236_1166690	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	902	Open in IMG/M
3300026307\|Ga0209469_1003033	Not Available	7777	Open in IMG/M
3300026307\|Ga0209469_1039394	All Organisms → cellular organisms → Archaea	1538	Open in IMG/M
3300026309\|Ga0209055_1000311	All Organisms → cellular organisms → Archaea	34734	Open in IMG/M
3300026313\|Ga0209761_1112803	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1335	Open in IMG/M
3300026328\|Ga0209802_1001871	All Organisms → cellular organisms → Archaea	15064	Open in IMG/M
3300026329\|Ga0209375_1013162	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	5057	Open in IMG/M
3300026329\|Ga0209375_1075052	All Organisms → cellular organisms → Archaea	1587	Open in IMG/M
3300026332\|Ga0209803_1204302	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	722	Open in IMG/M
3300026335\|Ga0209804_1148877	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1047	Open in IMG/M
3300026528\|Ga0209378_1151137	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	925	Open in IMG/M
3300026532\|Ga0209160_1030130	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3436	Open in IMG/M
3300026537\|Ga0209157_1042892	All Organisms → cellular organisms → Archaea	2475	Open in IMG/M
3300026538\|Ga0209056_10189817	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1517	Open in IMG/M
3300026540\|Ga0209376_1107804	Not Available	1411	Open in IMG/M
3300027655\|Ga0209388_1087628	All Organisms → cellular organisms → Archaea	895	Open in IMG/M
3300028536\|Ga0137415_10243002	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1610	Open in IMG/M
3300028536\|Ga0137415_10390208	All Organisms → cellular organisms → Archaea	1196	Open in IMG/M
3300031720\|Ga0307469_10055875	All Organisms → cellular organisms → Archaea	2515	Open in IMG/M
3300032180\|Ga0307471_100278844	All Organisms → cellular organisms → Archaea	1744	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.00%
Loam	Environmental → Terrestrial → Soil → Loam	5.00%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	54.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.00%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	36.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	18.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	14.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.00%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.00%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_104984642	3300001867	Forest Soil	KKRNHDVAYLLILLVILLGTFLFVTVAVNTLLRNIPIP*
JGI25385J37094_100142523	3300002558	Grasslands Soil	MDLPIIPFQKKKKRTHGVAILLILLAVLLGTFLFVSVAVNLLLRSIPIP*
JGI25383J37093_100616752	3300002560	Grasslands Soil	MDSPIIPFQKKKKRNHDVAILLILLAVLLGTFLFVTVAVNLLLRSIPIP*
JGI25390J43892_101542022	3300002911	Grasslands Soil	MDSPIVPFEKKKKWNHDMAYLLILLAILLGTFLFVTVAVNTLLRSIPIP*
JGI25386J43895_100004359	3300002912	Grasslands Soil	MDSPIIPFQKKKKRNHDVAILLILLAVLLGTFLFITVAVNLLLRSIPIP*
JGI25389J43894_10390162	3300002916	Grasslands Soil	MDSPIIPFQKKKKRNHDVAILLILLAVLLGTFFFVSVAVNLLLRSIPIP*
Ga0066674_100269893	3300005166	Soil	MDSPIISFQKKKKRNHDVAILLILLAVLLGTFLFVTVAVNLLLRGFPIP*
Ga0066672_100769781	3300005167	Soil	MDSPIVLFEKKKKRNHDVVYLLILLAILLGTFLFVTVAVKTLLRSLPIP*
Ga0066672_105135522	3300005167	Soil	MDSPIIPFQKKKKRNHDMAILLILLAVLLGTFLFVSVAVNLLLRSIPIP*
Ga0066677_103593212	3300005171	Soil	MDSPIIPFQKKKKRTHDVAVLLILLAVLLGTFLFVSVAVNLLLRSIPIP*
Ga0066679_109505672	3300005176	Soil	MDSPIVAFEKKKKRNHDMAYLLILLAVLLGTFLFVTVAVKT
Ga0066688_102562321	3300005178	Soil	MDSPIVPFEKKKKWNHDMAYLLILLAILLGTFLFVTVAVNTLLRS
Ga0066685_102710802	3300005180	Soil	MDSPIIPFQKKKKRNHDVAILLILLAVLLGTFLFVTVAVDLLLRGFPIP*
Ga0070708_1002095143	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGSPIVPFEKKKKRNHDVAYLLILLAILLGTFLFVTVAVNTLLRIIPIP*
Ga0070708_1015119363	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDSPFVPFEKKKKRNHDVAYLLLLLAILLGTFLFVTVAVNTLLRSIPIP*
Ga0066681_107360091	3300005451	Soil	TMDSPIIPFQKKKKRTHDVAILLILLAVLLGTFLFVSVAVNLLLRSIPIP*
Ga0070697_1000097172	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MDSPIVPFEKKKKRNHDVAYLLLLLAILLGTFLFVTVAVNTLLRSIPIP*
Ga0066697_100514393	3300005540	Soil	MDSPIIPFQKKKKRNHDVAILLILLAVLLGTFLFVSVAVNLLLRSIPIP*
Ga0066701_105826391	3300005552	Soil	MDSPIIPFQKKKKRTHDVAILLILLAVLLGTFLFVSVAVNLLLRSIPIP*
Ga0066661_100362222	3300005554	Soil	MDSPIIPFQKKKKRTHDVAILLILLAVLLGTFLFVSVAVNLFLRSIPIP*
Ga0066707_105488991	3300005556	Soil	MDSPIIPFQKKKKRTHDVAILLILLAVLLGTFLFVSVAVN
Ga0066707_108236622	3300005556	Soil	MDSPIIPFQKKKKRNHDVAILLILLAVLLGTFLFVSVA
Ga0066704_101369601	3300005557	Soil	MDSPIVPFEKKKKRNHDMAYLLILLAILLGTFLFVTVAVNTLLRSIPIP*
Ga0066708_103529321	3300005576	Soil	MDSPIIPFQKKKKRTHDVAILLILLAVLLGTFLFVSV
Ga0066654_100558491	3300005587	Soil	MDSPIIPFQKKRKRNHDVAILLILLAVLLGTFLFVSVAVNLLLRSIPIP*
Ga0066651_107567431	3300006031	Soil	MDSPIIPFQKKKKRTHDVAILLILLAVLLGTFLFV
Ga0066651_107601692	3300006031	Soil	VDSPIIPFQRKRKRNHDVAILLILLAVLLGTFLFVTVAVNLLLRSIPIP*
Ga0066652_1007725642	3300006046	Soil	MDSPIIPFQKKKKRTHDVAILLILLAVLLGTFLFVSVA
Ga0066665_104897422	3300006796	Soil	MDSSIIPFQKKKKRNHDVAILLILLAVLLGTFLFVSVAVNLLLR
Ga0066665_110457341	3300006796	Soil	MDSPIIPFQKKKKRTHDVAILLILLAVLLGTFLFVS
Ga0066665_113270992	3300006796	Soil	MDSPIIPFQKKKKRNHNVAILLILLAVLLGTFLFVTVAVNLLLRSIPIP*
Ga0066660_100383081	3300006800	Soil	KKRNHDLAILLILLAVLLGTFLFVSVAVNLLLRSIPIP*
Ga0066660_107108121	3300006800	Soil	MDSPIIPFQKKKKRNHDLAILLILLAVLLGTFLFVSVAVNLLLRSIPIP*
Ga0079220_101510063	3300006806	Agricultural Soil	MDSPIVPFEKKKKRNHDVAYLLLILAILLGTFLFVTVAVNTLLRSIPIP*
Ga0099793_100562813	3300007258	Vadose Zone Soil	MDSPIVPFEKKKKRNHDVAYVLILLAILLGTFLFVTFAVNTLLRSIPIP*
Ga0066710_1020281162	3300009012	Grasslands Soil	QKKKKRNHDVAILLILLAVLLGTFLFVTVAVDLLLRGFPIP
Ga0066710_1031430061	3300009012	Grasslands Soil	MHSPIIPFQKKKKRNHDGAILLILLAVLLGTFLFVSVAVNLL
Ga0066710_1033449592	3300009012	Grasslands Soil	RLSVYTMDSPIIPFQKKKKRNHDVAILLILLAVLLGTFLFVTVAVNLLLRSIPIP
Ga0066709_1014160371	3300009137	Grasslands Soil	KRTHDVAILLILLAVLLGTFLFVSVAVNLLLRSIPIP*
Ga0134082_100483002	3300010303	Grasslands Soil	MDSPIIPFQRKKKRNHDVAILLVLLAVLLGTFLFVTVAVNLLLRGFPIP*
Ga0134086_105060711	3300010323	Grasslands Soil	IIPFQKKKKRNHDVAILLILLAVLLGTFLFVTVAVNLLLRSIPIP*
Ga0134064_101798122	3300010325	Grasslands Soil	MDSPIIPFQKKKKRTHDVAILLILLAVLLGTFLFVTVAVNLLLRSIPIP*
Ga0134111_104182692	3300010329	Grasslands Soil	MDSPIISFQKKKKRNHDVAILLILLAVLLGTFLFVTVAVNLLLRSIPIP*
Ga0134080_107055861	3300010333	Grasslands Soil	MDSPIIPFQKKKKRNHDVAILLILLAVLLGTFLFVTVAV
Ga0134063_105089882	3300010335	Grasslands Soil	QKKKKRNHDVAILLILLAVLLGTFLFVTVAVDLLLRGFPIP*
Ga0134063_106897331	3300010335	Grasslands Soil	KRKRNHDVAILLILLAVLLGTFLFVTVAVNLLLRSIPIP*
Ga0134071_100630583	3300010336	Grasslands Soil	MDSPIVSFEKKKKRNHDLAYLLILLAILLGTFLFVTVAVNTLLRSIPIP*
Ga0134062_100771331	3300010337	Grasslands Soil	MDSPIIPFQKKRKRNHDVAILLILLAVLLGTFLFVTVAVNLLLRSIPIP*
Ga0137383_103321452	3300012199	Vadose Zone Soil	MDSPIIPFQKKKKRNHDVAILLILLAVLLGTFLFVTVAVNLLLRSFLIP*
Ga0137365_111841811	3300012201	Vadose Zone Soil	MVPFEKKKKRSHDVAYLIIILAMLIGTFLFVAVAVNMLLRSLPIP*
Ga0137363_100687674	3300012202	Vadose Zone Soil	MDFPIVPFEKKKKRNHDVTYVLILLAILLGTFLFVTVAVNTLLRSIPIP*
Ga0137399_100195653	3300012203	Vadose Zone Soil	MDSPIIPFQKKKKRNHDVAILLILPAVLLGTFLFVTVAVNLLLRSILIP*
Ga0137374_100810981	3300012204	Vadose Zone Soil	MDSPVIPFEKRKRRSHDVAIFLILMAVLLGTFLFVTVAVNLLLRSIPIP*
Ga0137374_103836011	3300012204	Vadose Zone Soil	MDSPLISFQRKKKRNHDVAILLVLLAVLLGTFLFVTVAVNLLLRGFPIP*
Ga0137380_100583024	3300012206	Vadose Zone Soil	MDSPIILFQKKKKRNHDVAILLILLAVLLGTFLFVTVAVNMLLRSIPIP*
Ga0137381_100369036	3300012207	Vadose Zone Soil	HDVAILLILLAVLLGTFLFVSVAVNLLLRSIPIP*
Ga0137381_100374263	3300012207	Vadose Zone Soil	MDSPIIPFQKKKTRNHDVAILLILLAVLLGTFLFVTVAVNLLLRSIPIP*
Ga0137381_103174422	3300012207	Vadose Zone Soil	MDSPIILFQKKKKRNHDVAILLILLAVLLGTFLFVTVAVNMLLRSIPTP*
Ga0137379_111729941	3300012209	Vadose Zone Soil	MDSSIIPFQKKKKRNHDVAILLILLAVLLGTFLFVSVAVNLLLRSIPIP*
Ga0137378_101168962	3300012210	Vadose Zone Soil	MDSPIVPFEKKKKRSHDVAYLIIILTMLIGTFLFVAVAVNLLLRSLPIP*
Ga0137378_113530481	3300012210	Vadose Zone Soil	MVPFEKKKKRNHDVAYLIIILAMLIGTFLFVAVAVNMLLRSLPIP*
Ga0137377_100775403	3300012211	Vadose Zone Soil	MDSPIIPFQKKKTRNHDVAILLILLAVLLGTFLFVTVAVNLLLRS
Ga0137387_100411481	3300012349	Vadose Zone Soil	NHDVAILLILLAVLLGTFLFVTVAVNLLLRSIPIP*
Ga0137387_100879015	3300012349	Vadose Zone Soil	FQKKKKRNHDVAILLILLAVLLGTFLFVTVAVNMLLRSIPTP*
Ga0137387_102665672	3300012349	Vadose Zone Soil	MDSPIILFQKKKKRNHDVAILLILLAVLLGTFLFVTVAVNMLLRSIP
Ga0137371_100179843	3300012356	Vadose Zone Soil	VPFEKKKKRNHDIAYLIIILAMLIGTFLFVAVAVNMLLRSLPIP*
Ga0137373_109864921	3300012532	Vadose Zone Soil	MDSPIIPFQKKKKRNHDVAILLILLAVLLGTFLFVTVAVNLLLRGFPIP*
Ga0134110_103737252	3300012975	Grasslands Soil	IPFQRKRKRNHDVAILLILLAVLLGTFLFVTVAVNLLLRSIPIP*
Ga0134087_100742033	3300012977	Grasslands Soil	HDVAILLILLAVLLGTFLFVTVAVNLLLRSIPIP*
Ga0134081_101901972	3300014150	Grasslands Soil	MDSPIIPFQKKKKRNHDVAILLILLAVLLGTFLFVTVAVDLLLRGLPIP*
Ga0137418_102031502	3300015241	Vadose Zone Soil	MDFPIVPFEKKKKRNHDVAYVLILLAILLGTFLFVTFAVNTLLRSIPIP*
Ga0134074_12293821	3300017657	Grasslands Soil	IIPFQKKRKRNHDVAILLILLAVLLGTFLFVTVAVNLLLRSIPIP
Ga0134083_103127671	3300017659	Grasslands Soil	MDSPIIPFQKKKKRNHDVAILLILLAVLLGTFLFVTVAVNLLLRGFPIP
Ga0066655_100407992	3300018431	Grasslands Soil	MDSPIIPFQKKKKRNHDVAILLILLAVLLGTFLFVTVAVDLLLRGFPIP
Ga0066655_114454151	3300018431	Grasslands Soil	KRNHDVAILLILLAVLLGTFLFVTVAVNLLLRSIPIP
Ga0066662_100150751	3300018468	Grasslands Soil	MDSPIVPFEKKKKWNHDMAYLLILLAILLGTFLFVTVA
Ga0066662_100174143	3300018468	Grasslands Soil	MDSPIIPFQKKKKRNHDMAILLILLAVLLGTFLFVSVAVNLLLRSIPIP
Ga0066669_114125601	3300018482	Grasslands Soil	YQMDSLIISFQKKKKRNHDVAILLILLAVLLGTFLFVTVAVNLLLRGFPIP
Ga0209350_10030219	3300026277	Grasslands Soil	MDSPIIPFQKKKKRNHDVAILLILLAVLLGTFLFVTVAVNLLLRSIPIP
Ga0209236_10040932	3300026298	Grasslands Soil	MDLPIIPFQKKKKRTHGVAILLILLAVLLGTFLFVSVAVNLLLRSIPIP
Ga0209236_11666901	3300026298	Grasslands Soil	MDSPIISFQKKKKRSHDVAILLTLLAILLGTFLFVTVAVNLLSRSIPIP
Ga0209469_10030335	3300026307	Soil	MDSPIISFQKKKKRNHDVAILLILLAVLLGTFLFVTVAVNLLLRGFPIP
Ga0209469_10393942	3300026307	Soil	MDSPIIPFQRKKKRNHDVAILLVLLAVLLGTFLFVTVAVNLLLRGFPIP
Ga0209055_100031120	3300026309	Soil	MDSPIVLFEKKKKRNHDVVYLLILLAILLGTFLFVTVAVKTLLRSLPIP
Ga0209761_11128031	3300026313	Grasslands Soil	KKRSHDVAILLTLLAILLGTFLFVTVAVNLLSRSIPIP
Ga0209802_10018713	3300026328	Soil	MDSPIIPFQKKKKRNHDVAILLILLAVLLGTFLFVSVAVNLLLRSIPIP
Ga0209375_10131626	3300026329	Soil	VDSPIIPFQRKRKRNHDVAILLILLAVLLGTFLFVTVAVNLLLRSIPIP
Ga0209375_10750523	3300026329	Soil	KKKKRNHDVAILLILLAVLLGTFLFVTVAVDLLLRGFPIP
Ga0209803_12043021	3300026332	Soil	MDSPIIPFQKKKKRNHNVAILLILLAVLLGTFLFVTVAVNLLLRSIPIP
Ga0209804_11488771	3300026335	Soil	MDSPIIPFQKKKKRNHDLAILLILLAVLLGTFLFVSVAVNLLLRSIPIP
Ga0209378_11511372	3300026528	Soil	MDSPIIPFQKKKKRTHDVAILLILLAVLLGTFLFVSVAVNLLLRSIPIP
Ga0209160_10301304	3300026532	Soil	MDSPIIPFQKKKKRNHDVAILLILLAVLLGTFLFVSVAINLLLRSIPIP
Ga0209157_10428924	3300026537	Soil	MDSPIIPFQKKKKRTHDVAILLILLAVLLGTFLFVSVAV
Ga0209056_101898172	3300026538	Soil	MDSSIIPFQKKKKRNHDVAILLILLAVLLGTFLFVSVAVNLLLRSIPIP
Ga0209376_11078041	3300026540	Soil	KKKKRNHDVAILLILLAVLLGTFLFVSVAVNLLLRSIPIP
Ga0209388_10876281	3300027655	Vadose Zone Soil	MDFPIVPFEKKKKRNHDVTYVLILLAILLGTFLFVTVAVNTLLRSIPIP
Ga0137415_102430023	3300028536	Vadose Zone Soil	MDSPIIPFQKKKKRNHDVAILLILPAVLLGTFLFVTVAVNLLLRSILIP
Ga0137415_103902081	3300028536	Vadose Zone Soil	MDFPIVPFEKKKKRNHDVAYLLILLAILLGTFLLATVAVNTLLRRIPIP
Ga0307469_100558751	3300031720	Hardwood Forest Soil	MDSPIVPFEKKKKRNHDVAYLLLLLAFLLGTFLFVTVAVNTLLRSIPIP
Ga0307471_1002788441	3300032180	Hardwood Forest Soil	SFEKKKKRNHDVAYLLLLLAILLGTFLFVTVAVNTLLRSIPIP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F104843

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences