Metagenome / Metatranscriptome Family F104845

Basic Information
Family ID	F104845
Family Type	Metagenome / Metatranscriptome
Number of Sequences	100
Average Sequence Length	94 residues
Representative Sequence	PPSGIERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLESCLGRVRAADGLSVRARAHLLADLAGVADAIDVALKGD
Number of Associated Samples	74
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.89 %
% of genes near scaffold ends (potentially truncated)	50.00 %
% of genes from short scaffolds (< 2000 bps)	44.00 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (53.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil (19.000 % of family members)
Environment Ontology (ENVO)	Unclassified (38.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 77.65% β-sheet: 0.00% Coil/Unstructured: 22.35%
Feature Viewer

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Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF04371	PAD_porph	56.00
PF01645	Glu_synthase	3.00
PF00795	CN_hydrolase	2.00
PF09694	Gcw_chp	2.00
PF01493	GXGXG	1.00
PF00593	TonB_dep_Rec	1.00
PF13431	TPR_17	1.00
PF00127	Copper-bind	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG2957	Agmatine/peptidylarginine deiminase	Amino acid transport and metabolism [E]	56.00
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	3.00
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	3.00

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.00 %
Unclassified	root	N/A	47.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.00 %
Unclassified	root	N/A	47.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.00 %
Unclassified	root	N/A	47.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.00 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	10.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.00 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	10.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.00 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	8.00 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	1.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.00 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.00 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1.00 %
Gemmatimonadetes bacterium GWC2_71_9	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium GWC2_71_9	1.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.00 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.00 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1.00 %
Gemmatimonadetes bacterium GWC2_71_9	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium GWC2_71_9	1.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1049169	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300002561\|JGI25384J37096_10061005	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300002561\|JGI25384J37096_10211024	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300002908\|JGI25382J43887_10087910	All Organisms → cellular organisms → Bacteria	1660	Open in IMG/M
3300002908\|JGI25382J43887_10183554	All Organisms → cellular organisms → Bacteria → Proteobacteria	1025	Open in IMG/M
3300002911\|JGI25390J43892_10036587	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300002912\|JGI25386J43895_10200346	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300005518\|Ga0070699_100150648	All Organisms → cellular organisms → Bacteria	2057	Open in IMG/M
3300005536\|Ga0070697_100911864	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	780	Open in IMG/M
3300005549\|Ga0070704_100322308	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300005557\|Ga0066704_10257623	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300006797\|Ga0066659_11075698	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300006853\|Ga0075420_100489774	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300006904\|Ga0075424_100024012	All Organisms → cellular organisms → Bacteria	6273	Open in IMG/M
3300006904\|Ga0075424_101765131	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300007255\|Ga0099791_10433728	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300009012\|Ga0066710_104401681	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300009137\|Ga0066709_101865714	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300009137\|Ga0066709_102941669	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300009162\|Ga0075423_11140096	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300009162\|Ga0075423_12995302	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300010304\|Ga0134088_10255038	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300011271\|Ga0137393_11058128	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	690	Open in IMG/M
3300012198\|Ga0137364_10509600	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300012208\|Ga0137376_11712366	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300012209\|Ga0137379_11094560	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300012349\|Ga0137387_10547572	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300012351\|Ga0137386_10800232	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	677	Open in IMG/M
3300012353\|Ga0137367_10192553	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300012356\|Ga0137371_10190048	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium GWC2_71_9	1609	Open in IMG/M
3300012357\|Ga0137384_10419577	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300012917\|Ga0137395_10688038	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	740	Open in IMG/M
3300015359\|Ga0134085_10427805	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	597	Open in IMG/M
3300018056\|Ga0184623_10030586	All Organisms → cellular organisms → Bacteria	2423	Open in IMG/M
3300019259\|Ga0184646_1285988	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300019259\|Ga0184646_1504418	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	801	Open in IMG/M
3300019998\|Ga0193710_1001725	All Organisms → cellular organisms → Bacteria	2267	Open in IMG/M
3300021080\|Ga0210382_10170080	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300022694\|Ga0222623_10000710	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	10934	Open in IMG/M
3300022756\|Ga0222622_10189153	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300025910\|Ga0207684_11651380	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300026297\|Ga0209237_1023003	All Organisms → cellular organisms → Bacteria	3521	Open in IMG/M
3300026297\|Ga0209237_1107744	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300026313\|Ga0209761_1019996	All Organisms → cellular organisms → Bacteria	4206	Open in IMG/M
3300026529\|Ga0209806_1122404	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300026548\|Ga0209161_10195980	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300027846\|Ga0209180_10492265	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300028884\|Ga0307308_10190504	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300031720\|Ga0307469_10028689	All Organisms → cellular organisms → Bacteria	3189	Open in IMG/M
3300031720\|Ga0307469_10061371	All Organisms → cellular organisms → Bacteria	2432	Open in IMG/M
3300031720\|Ga0307469_10555276	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1018	Open in IMG/M
3300031820\|Ga0307473_10934883	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	628	Open in IMG/M
3300032180\|Ga0307471_100738888	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.00%
Host-Associated	Host-Associated	11.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.00%
Aquatic	Environmental → Aquatic	13.00%
Plants	Host-Associated → Plants	11.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.00%
Sediment	Environmental → Aquatic → Sediment	10.00%
Freshwater	Environmental → Aquatic → Freshwater	3.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.00%
Loam	Environmental → Terrestrial → Soil → Loam	7.00%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.00%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	30.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.00%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.00%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	19.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.00%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.00%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.00%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.00%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.00%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.00%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019998	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m1	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10491692	3300002557	Grasslands Soil	GAHRWHVAPVRDDLPAPPPAAIERRSPERLTLELVGLSLGALERLWTAADQATVYLCAALDVLDGCLWHVREATGLSTVTRAHLLADLAAVATAIDDVLSPSP*
JGI25384J37096_100610053	3300002561	Grasslands Soil	GAHRWHVAPVRDDLPAPPPAAIERRSPERLTLELVGLSLGALERLWTAADQATVYLCAALDVLDGCLWHVREATGLSIVTRAHLLADLAAVATAIDDVLSPSA*
JGI25384J37096_102110242	3300002561	Grasslands Soil	ESRWVGCRTGAALWHIAPVRVDAPDPPPSGVERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALGVLETCLRRVRLADGLSVEARAHLLADLAGVADAIDVALKT*
JGI25382J37095_100460254	3300002562	Grasslands Soil	PERLTLELVGLSLGALERLWTAADQATVYLCAALDVLDGCLWHVREATGLSIVTRAHLLADLAAVATAIDDVLSPSA*
JGI25382J37095_102558082	3300002562	Grasslands Soil	ERLWTAADQATVYLCAALDVLDGCLWHVREATGLSIVTRAHLLADLAAVATAIDDVLSPSA*
JGI25382J37095_102646242	3300002562	Grasslands Soil	PERLVIELAGLSLGALERIWRAADQATVYLCAALEVLESCLGRVRVAEGLSVRARAHLLADLAGVADAIDVALKGD*
JGI25382J43887_100879101	3300002908	Grasslands Soil	VRSDVPAPPPDGVERRSPERLVLELAGLSLGALEQIWAVADQATVYLCGALALLEACLERVRAAHGLTTTTRAHLLADLAFVADAIQGGLDAA*
JGI25382J43887_101771613	3300002908	Grasslands Soil	ATVYLCAALDVLDGCLWHVREATGLSIVTRAHLLADLAAVATAIDDVLSPSA*
JGI25382J43887_101835542	3300002908	Grasslands Soil	VVEIVSPPDAPLQILDVDLGGLLHQWGRRVRPNSRWVGCRADGARWHIAPVRLDAPEPPPSGIERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLEGCLGRVRVAQGLSVRTRAHLLADLAGVADAIDVALKGD*
JGI25390J43892_100365871	3300002911	Grasslands Soil	AARWHIAPVRLDAPEPPPSGIERRSPERLVIELAGLSLGALERIWRAADQATVYLCAALEVLESCLGRVRVAEGLSVRARAHLLADLAGVADAIDVALKGD*
JGI25386J43895_102003461	3300002912	Grasslands Soil	LARPESRWVGCRTGAALWHIAPVRVDAPDPPPSGVERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALGVLETCLRRVRLADGLSVEARAHLLADLAGVADAIDVALKT*
Ga0066683_108753522	3300005172	Soil	GLSLGALERLWTAADQATVYLCAALDVLDGCLWHVREATGLSIVTRAHLLADLAAVATAIDDVLSPSA*
Ga0065707_104766061	3300005295	Switchgrass Rhizosphere	PPPSGIERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLENCLGRVRTTDGLSVHARAHLLADLAGVADAIDGALSM*
Ga0070705_1002569612	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	ERLVVELAALSLGALERIWRAADQETVFLCAALEALDTCLGRIRGADGLSVVARAHLLADLAGVAEAIDGALRG*
Ga0070705_1018667102	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	PSGIERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLETCLGRVRQTEGLSVGARAHLLADLAGVADAIDVALRT*
Ga0070708_1019805022	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	PPPAGIERRSPERLVLELAGLSLGALERIWAVADQATGYLCGALALLDACFERVRRVESLTPSARAHLLADLAVVEDAIEGALDAA*
Ga0066686_103541661	3300005446	Soil	GLSLGALERLWTAADQATVYLCAALDVLDGCLWHVREATGLSIVTRAHLLADLAAVATAIDDVLSPSP*
Ga0066689_105499912	3300005447	Soil	GLSLGALERLWTAADQATVYLCAALDVLDGCLWHVREATGLSTVTRAHLLADLAAVATAIDDVLSPSP*
Ga0070699_1001506483	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VVEIVSPSDPPPEMLQLDLGGLLHEWGRKPRPESRWVGTRAGSAVWHVAPVRLDTPAPPPSGIERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLENCLGRVRTTDGLSVHARAHLLADLAGVADAIDGAMRA*
Ga0070697_1009118642	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ADAPPQLLNLDLGGMLHTWGRLARPESRWVGCWTGGPIWHIAPVRLDPPDPPPSGIERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLDSCLGRVRQADGLSVGARAHLLADLAGVADAIDVALRT*
Ga0070704_1003223081	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	RPESRWVGCWTGGPIWHIAPVRLDPPDPPPSGIERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLDSCLGRVRQADGLSVGARAHLLADLAGVADAIDVALRT*
Ga0066692_106736571	3300005555	Soil	AIERRSPERLTLELVGLSLGALERLWTAADQATVYLCAALDVLDGCLWHVREATGLSIVTRAHLLADLAAVATAIDDVLSPSA*
Ga0066704_102576231	3300005557	Soil	LDAPEPPPSGIERRSPERLVIELAGLSLGALERIWRAADQATVYLCAALEVLESCLGRVRVAEGLSVRARAHLLADLAGVADAIDVALKGD*
Ga0066665_104239061	3300006796	Soil	LGALERIWQAADQATVYLCAALGVLETCLQRVRLADGLSVGARAHLLADLAGVADAIDVALKT*
Ga0066659_105285761	3300006797	Soil	PPAAIERRSPERLTLELVGLSLGALERLWTAADRATVYLCAALDVLDGCLWHVREATGLSTVTRAHLLADLAAVATAIDDVLSPSP*
Ga0066659_110756981	3300006797	Soil	PAPPPAAIERRSPERLTLELVGLSLGALERLWTAADQATVYLCAALDVLDGCLWHVREATGLSIVTRAHLLADLAAVATAIDDVLSPSA*
Ga0079220_121403623	3300006806	Agricultural Soil	VERRSPERLTLELASLSLGALERMWATADQATIYLCAARAMLDNCMGRVCGADGLSTTSRAHLLADLAGVADAIDGALKAA*
Ga0075433_103008631	3300006852	Populus Rhizosphere	PPSGIERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLESCLGRVRAADGLSVRARAHLLADLAGVADAIDVALKGD*
Ga0075420_1004897742	3300006853	Populus Rhizosphere	DLGGLLHQWGRKPRPESRWVGTRAGSAIWHVAPVRLDTPAPPPSGVERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLENCLGRVRTADGLSVHARAHLLADLAGVADAIDGALSS*
Ga0075424_1000240121	3300006904	Populus Rhizosphere	LTVVESVSPADAPPQLLNLDLGGMLHTWGRLARPESRWVGCWTGGPIWHIAPVRLDPPDPPPSGIERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLDTCLGRVRQADGLSVGARAHLLADLAGVADAIDVALRT*
Ga0075424_1007004502	3300006904	Populus Rhizosphere	ERLVIELAGLSLGALERIWQAADQATVYLCAALEVLESCLGRVRVAEGLSVRARAHLLADLAGVADAIDVALKGD*
Ga0075424_1017651312	3300006904	Populus Rhizosphere	GRTVVEIVSPPHPPREMLELDLGGMLRQWGRQVRPESRWVGCRTESAVWHIAPVRLNPPEPPPLGIERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLDECLGRVRTTDGLSVHARAHLLADLAGVADAIDGALRA*
Ga0075424_1025455202	3300006904	Populus Rhizosphere	SGIERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLESCLGRVRAADGLSVRARAHLLADLAGVADAIDVALKGD*
Ga0075436_1004490731	3300006914	Populus Rhizosphere	VERRSPERLTLELASLSLGALERIWATADQATIYLCAARAMLESCMGRVCGTEGLSTASRAHLLAELAGIADAIDGALKAA*
Ga0099791_104337282	3300007255	Vadose Zone Soil	PAPAVDPAGFDVIGLLQSWGRIAPRDSMWVGCRVNDDRWHVAPVRVHPPEGPPAGIERRSPERLVVELAGLCFGALEPVWIASDQTTVYLCAALESLERCLSRIRTTMGLSVAARAHLLADLARVADAVDRALQD*
Ga0066710_1044016811	3300009012	Grasslands Soil	HWHVAPVRSDPPEPPPTGIERRSPERLVMELAGFSLGALERISTAADQATVYLCSALCILDVCLGRIRTAQVLTPGVQAHLLSDLVGVADAIDNALSA
Ga0066709_1018657142	3300009137	Grasslands Soil	PVRLDAPEPPPAGIERRSPERLVIELAGLPLGALERIWRAADQATVYPCAAPEVLESCLGRVRVAEGLSVRARAHLLADLAGVTDAIDGALKGD*
Ga0066709_1029416692	3300009137	Grasslands Soil	PPQLLELDLGGLLHQWGRRAKPESRWVGCRTATTLWHVAPVRLDPPEPPPSGIERRSPERLVIGLAGLSLGALERIWQAADQATVYLCAALEVLEGCLGRVRLADGLSVGARAHLLADLAGVADAIDVALRT*
Ga0075423_111400962	3300009162	Populus Rhizosphere	RLDAPEPPPSGIERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLESCLGRVRVAEGLSVRARAHLLADLAGVADAIDVALKGD*
Ga0075423_112967672	3300009162	Populus Rhizosphere	RSPERLVMELAGFSLGALERIWTAADQATVYLCSALCILDVCLGRIRTAQVLTPGVQAHLLSDLVGVADAIDQALSA*
Ga0075423_120248971	3300009162	Populus Rhizosphere	RSPERLVMELAGFSLGALERIWTAADQATVYLCSALCILDVCLGRIRTAQVLTPGVQAHLLSDLVGVADAIDHALSA*
Ga0075423_129953021	3300009162	Populus Rhizosphere	GGRTVVEIVSPPNPPREMLELDLGGMLHQWGRKVRPESRWVGCRTENAVWHIAPVRLNPPEPPPLGVERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLEDCLGRVRTTDGLSVHARAHLLADLAGVADAIDGALRT*
Ga0134088_102550382	3300010304	Grasslands Soil	VDAPDPPPSGVERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALGVLETCLRRVRLADGLSVEARAHLLADLAGVADAIDVALRT*
Ga0134088_105557892	3300010304	Grasslands Soil	WTAADQATVYLCAALDVLDGCLWHVREATGLSIVTRAHLLADLAAVATAIDDVLSPSP*
Ga0134071_100910953	3300010336	Grasslands Soil	IERRSSERLVMELAGFALGALERIWTAADQATVYLCSALCILDVCLGRIRTAQVLTPGVQAHLLADLAGVADAIDNALSA*
Ga0134071_103606982	3300010336	Grasslands Soil	ERLWTAADQATVYLCAALDVLDGCLWHVREATGLSIVTRAHLLADLAAVATAIDDVLSPSP*
Ga0134122_127204662	3300010400	Terrestrial Soil	SLGALERIWQAADQATVYLCAALEVLESCLGRVRVAEGLSVRARAHLLADLAGVADAIDVALKGD*
Ga0137393_110581282	3300011271	Vadose Zone Soil	EAPEPPPSGIERRSPDRLVIELAGLSLGALERIWQAADQATVYLCAALEVLETCLGRVRQAEGLSVGARAHLLADLAGVADAIDVALRT*
Ga0137364_105096002	3300012198	Vadose Zone Soil	RVGDDRWHVAAVRGDSPPPPPAGLERRSPERLVIELGGLCLGAHERAWMAGDQATVYLCSALDLLETCLGRIRTADGLSAHGRAHILADLAGVADVINDALRA*
Ga0137376_117123662	3300012208	Vadose Zone Soil	WHVAPVRLDPPEPPPSGIERRSPERLVIGLAGLSLGALERIWQAADQATVYLCAALEVLEGCLGRVRLADGLSVGARAHLLADLAGVADAIDVALRT*
Ga0137379_110945601	3300012209	Vadose Zone Soil	APEPPPSGIERRSPERLVIALAGLSLGALERIWQAADQATVYLCAALEVLEGCLGRVRLADGLSVAARAHLLADLAGVADAIDVALRT*
Ga0137387_105475721	3300012349	Vadose Zone Soil	RTGAALWHIAPVRLDAPGPPPSGIERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLETCLGRVRQADGLSVGARAHLLADLAGVADAIDVALRT*
Ga0137386_102833802	3300012351	Vadose Zone Soil	VIELAGLSLGALEPIWQAADQATVYLCAALGVLETCLRRVRLADGLSVGARARLLADLASVADAIDVALRT*
Ga0137386_108002321	3300012351	Vadose Zone Soil	APDPPPSGVVRRSPERLVIELAGLSLGALERIWQAADQATVYLCAALGVLETCMRRVRLADGLSVGARAHLLADLAGVADAIDVALRT*
Ga0137367_101925533	3300012353	Vadose Zone Soil	RWVGCRTGAALWHIAPVRVDAPDPPPSGVERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLESCLGRVRVADGLSVRARAHLLADLAGVADAIDVALRT*
Ga0137371_101900481	3300012356	Vadose Zone Soil	RLARPESRWVGCWTGGTIWHIAPVRLDPPDPPPSGIERRSPERLVIGLAGLSLGALERIWQAADQATVYLCAALEVLETCLGRVRQADGLSVGARAHLLADLAGVADAIDVALRT*
Ga0137384_104195772	3300012357	Vadose Zone Soil	VRLDPPEPPPSGIERRSPERLVIGLAGLSLGALERIWQAADQATVYLCAALEVLEGCLGRVRLADGLSVAARAHLLADLAGVADAIDVALRT*
Ga0137368_104024531	3300012358	Vadose Zone Soil	PERLVVELTGLCCGALEPTWVASDQATVYLCAALEVLERCLRRIRITDGLSLHARAHLLADLAGVADAIDGALRA*
Ga0137360_106628512	3300012361	Vadose Zone Soil	LGALERIWQAADQATVYLCAALEVLETCLGRVRQADGLSVGARAHLLADLAGVADAIDVALRT*
Ga0137390_104829011	3300012363	Vadose Zone Soil	PDRLVIELAGLSLGALERIWQAADQATVYLCAALEVLETCLGRVRQAEGLSVGARAHLLADLAGVADAIDVALRT*
Ga0137395_106880381	3300012917	Vadose Zone Soil	ILDVDLGGLLHQWGRQVRPDSRWVGCRADGARWHIAPVRLDAPEPPPSGIERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLESCLGRGRVAEGLSVRARAHLLADLAGVVDAIDVALKGD*
Ga0134075_101236891	3300014154	Grasslands Soil	ELVGLSLGALERLWTAADQATVYLCAALDVLDGCLWHVREATGLSIVTRAHLLADLAAVATAIDDVLSPSP*
Ga0134085_104278052	3300015359	Grasslands Soil	VPAPPPAGVERRSPERLVLELAGLSLGALEQIWAVADQATVYLCGALALLEACLERVRAAHGLTTPTRAHLLADLAFVADAIQGGLDAA*
Ga0134083_101151533	3300017659	Grasslands Soil	ELVGLSLGALERLWTAADQATVYLCAALDVLDGCLWHVREATGLSIVTRAHLLADLAAVATAIDDVLSPSP
Ga0134083_103226371	3300017659	Grasslands Soil	ELVGLSLGALERLWTAADQATVYLCAALDVLDGCLWHVREATGLSIVTRAHLLADLAAVATAIDDVLSPSA
Ga0184610_10623721	3300017997	Groundwater Sediment	IERRSPERLVIELAGLSLGALERIWRAADQATVYLCAALEVLENCLGRVRNADGLSVGARAHLLADLAGVVDAIDGALST
Ga0184626_101051701	3300018053	Groundwater Sediment	PPGPPPSGIERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLEDCLGRVRTTDGLSVHARAHLLADLAGVADAIDGALRS
Ga0184621_103163182	3300018054	Groundwater Sediment	VRSDPPEPPPTGIERRSSERLVMELAGFSLGALERIWTAADQATVYLCSALCIPDVCLGRIRTAQVLTPGVQAHLLSDLAGVADAIDNALST
Ga0184623_100305863	3300018056	Groundwater Sediment	RWIGCHSGTAIWHVAPVRLDTPGPPPSGIERRSPERLVIELAGLSLGALERIWRAADQATVYLCAALEVLENCLGRVRNADGLSVGARAHLLADLAGVVDAIDGALST
Ga0184609_100335243	3300018076	Groundwater Sediment	AGLSLGALERIWRAADQATVYLCAALEVLEGCLGRVRTTDGLSVHARAHLLADLAGVADAIDGALSA
Ga0184629_106356711	3300018084	Groundwater Sediment	ERLVLELAGLSLGALERIWRAADQATVFLCAALGVLETCLGRVCVADGLSVVARAHLLADLAGVADAIDGALSA
Ga0066662_129025831	3300018468	Grasslands Soil	RLVIELAGLSLGALERIWQAADQATVYLCAALGVLETCLQRVRLADGLSVGARAHLLADLAGVADAIDVALKT
Ga0184646_12859882	3300019259	Groundwater Sediment	VGCRTETALWHVAPVRLDPPGPPPSGIERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLEACLGRVRTTDGLSVRARAHLLADLAGVADAIDGALSA
Ga0184646_15044181	3300019259	Groundwater Sediment	PESRWVGCRTQMEIWHIAPVRLDPPGPPPSGIERRSPERLVIELAGLSLGALERIWRAADQATVYLCAALEVLENCLGRVRNADGLSVGARAHLLADLAGVVDAIDGALST
Ga0193710_10017253	3300019998	Soil	WQVAPVRSDPPEPPPTGIERRSSERLVMELAGFSLGALERIWTAADQATVYLCSALCILDVCLGRIRTAQVLTPGVQAHLLSDLAGVADAIDNALSA
Ga0210382_101700801	3300021080	Groundwater Sediment	LGGLLHQWGRRAKPESRWVGCRTATATALWHVAPVRLDPPEPPPSGIERRSPERLVIGLAGLSLGALERIWQAADQATVYLCAALEVLESCLGRVRLADGLSIGARAHLLADLAGVADAIDVALRT
Ga0193719_103529782	3300021344	Soil	RRSPERLVIELAGLSLGALERFWTAADQATVYLCAALEVLDSCLGRVRMTDGLSVHARAHLLADLAGVADAIDGALSA
Ga0224452_10040715	3300022534	Groundwater Sediment	RRSPERLVIGLAGLSLGALERIWQAADQATVYLCAALEVLESCLGRVRLADGLSIGARAHLLADLAGVADAIDVALRT
Ga0222623_100007101	3300022694	Groundwater Sediment	PVRLDPPEPPPSGIERRSPERLVIGLAGLSLGALERIWQAADQATVYLCAALEVLESCLGRVRLADGLSIGARAHLLADLAGVADAIDVALRT
Ga0222622_101891532	3300022756	Groundwater Sediment	RFSSDGHTVLEIVSRPDPPRALLDLDLGRLLRQWGRRARPESRWIGCHSGTAIWHVAPVRLDTPGPPPSGIERRSPERLVIELAGLSLGALERIWRAADQATVYLCAALEVLENCLGRVRNADGLSVGARAHLLADLAGVVDAIDGALST
Ga0222622_107668881	3300022756	Groundwater Sediment	PERLVIELAGLSLGALERIWQAADQATVYLCAALEVLEGCLGRVRTTDGLSVHARAHLLADLAGVADAIDGALRT
Ga0207684_116513802	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	RLLREWGRRPRPESRWVGCRADATRWHIAPVRLEAPEPPPSGIERRSPDRLVIELAGLSLGALERIWRAADQATVYLCAALEVLETCLGRVRQTEGLSVGARAHLLADLAGVADAIDVALRT
Ga0209237_10230031	3300026297	Grasslands Soil	RWHIAPVRLDAPEPPPSGIERRSPERLVIELAGLSLGALERIWRAADQATVYLCAALEVLESCLGRVRVAEGLSVRARAHLLADLAGVADAIDVALKGD
Ga0209237_11077442	3300026297	Grasslands Soil	PGAPAQILELDLGGLLHQWGRLARPESRWVGCRTGAALWHIAPVRVDAPDPPPSGVERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALGVLETCLQRVRLADGLSVGARAHLLADLAGVADAIDVALKT
Ga0209238_11299301	3300026301	Grasslands Soil	VGLSLGALERLWTAADQATVYLCAALDVLDGCLWHVREATGLSTVTRAHLLADLAAVATAIDDVLSPSP
Ga0209761_10199961	3300026313	Grasslands Soil	VDLGGLLHQWGRQVRPDSRWVGCRADAARWHIAPVRLDAPEPPPSGIERRSPERLVIELAGLSLGALERIWRAADQATVYLCAALEVLESCLGRVRVAEGLSVRARAHLLADLAGVADAIDVALKGD
Ga0209806_11224042	3300026529	Soil	AHRWHVAPVRDDLPAPPPAAIERRSPERLTLELVGLSLGALERLWTAADQATVYLCAALDVLDGCLWHVREATGLSTVTRAHLLADLAAVATAIDDVLSPSP
Ga0209056_101233373	3300026538	Soil	LGALERIWQAADQATVYLCAALGVLETCLQRVRLADGLSVGARAHLLADLAGVADAIDVALKT
Ga0209161_101959802	3300026548	Soil	HIAPVRVDAPDPPPSGVERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALRVLETCLRRVRLAEGLSVGARAHLLADLAGVADAIDVALRT
Ga0209073_100212501	3300027765	Agricultural Soil	RLTLELASLSLGALERMWATADQATIYLCAARAMLDNCMGRVCGADGLSTTSRAHLLADLAGVAEAIDGALRAA
Ga0209180_104922651	3300027846	Vadose Zone Soil	LWLGCRLGAHRWHVAPVRDDLPTPPPASIERRSPERLTLELVGLSLGALERLWTAADQATVYLCAALDVLDGCLWHVREATGLSIVTRAHLLADLAAVATAIDDVLSPSA
Ga0307308_101905041	3300028884	Soil	MATATALWHVAPVRLDPPEPPPSGIERRSPERLVIGLAGLSLGALERIWQAADQATVYLCAALEVLESCLGRVRLADGLSIGARAHLLADLAGVADAIDVALRT
Ga0307469_100286891	3300031720	Hardwood Forest Soil	LDVDLGVLLHQWGRRVRPDSRWVGCRADGARWHVAPVRLDAPEPPPSGIERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLESCLGRVRVADGLSVRARAHLLADLAGVADAIDVALKGD
Ga0307469_100613714	3300031720	Hardwood Forest Soil	APVRLDAPEPPPSGIERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLESCLGRVRVAEGLSVRARAHLLADLAGVADAIDVALKGD
Ga0307469_105552762	3300031720	Hardwood Forest Soil	MRNPELLELDLGRLLHEWGRRPRPESRWVGCRADATRWHIAPVRLDAPEPPPSGIERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLETCLGRVRQTEGLSVGARA
Ga0307473_104858901	3300031820	Hardwood Forest Soil	DPPPTGIERRSPERLVMELAGFSLGALERIWTAADQATVYLCSALCILDVCLGRIRTAQVLTPGVQAHLLSDLVGVADAIDHALSA
Ga0307473_109348832	3300031820	Hardwood Forest Soil	RPDSRWVGCRADGARWHIAPVRLDAPEPPPSGIERRSPERLVIELAGLSLGALERIWQAADQATVYLCAALEVLESCLGRVRVADGLSVRARAHLLADLAGVADAIDVALKGD
Ga0307473_112245001	3300031820	Hardwood Forest Soil	RLVIELAGLSLGALERIWQAADQATVYLCAALEVLETCLGRVRQTEGLSVGARAHLLADLAGVADAIDVALRT
Ga0307471_1002565051	3300032180	Hardwood Forest Soil	VERRSPERLTLELASLSLGALERMWATTDQATIYLCAARAMLDNCMGRVCGADGLSTTSRAHLLADLAGVAEAIDGALKAA
Ga0307471_1007388881	3300032180	Hardwood Forest Soil	VGCRTETALWHIAPVRTDPPGPPPSGIERRSPERLVVELAALSLGALERIWRAADQETVFLCAALEALDTCLGRIRGADGLSVVARAHLLADLAGVAEAIDGALRG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F104845

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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