NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F104945

Metagenome / Metatranscriptome Family F104945

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F104945
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 79 residues
Representative Sequence MPPDAKKVRALQLNLEGLFKLAGGSSDDKQRFLEMIIGITTPIEVRLINGQIDAMAAHAKAIQAGAKALQNSAQQIAKRG
Number of Associated Samples 83
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 83.00 %
% of genes near scaffold ends (potentially truncated) 27.00 %
% of genes from short scaffolds (< 2000 bps) 80.00 %
Associated GOLD sequencing projects 71
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (75.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere
(12.000 % of family members)
Environment Ontology (ENVO) Unclassified
(62.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(79.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 62.96%    β-sheet: 0.00%    Coil/Unstructured: 37.04%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF02768DNA_pol3_beta_3 43.00
PF02624YcaO 10.00
PF00825Ribonuclease_P 2.00
PF02463SMC_N 2.00
PF02738MoCoBD_1 2.00
PF01656CbiA 1.00
PF00468Ribosomal_L34 1.00
PF13175AAA_15 1.00
PF13519VWA_2 1.00
PF08299Bac_DnaA_C 1.00
PF00082Peptidase_S8 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0592DNA polymerase III sliding clamp (beta) subunit, PCNA homologReplication, recombination and repair [L] 43.00
COG1944Ribosomal protein S12 methylthiotransferase accessory factor YcaOTranslation, ribosomal structure and biogenesis [J] 10.00
COG0594RNase P protein componentTranslation, ribosomal structure and biogenesis [J] 2.00
COG0230Ribosomal protein L34Translation, ribosomal structure and biogenesis [J] 1.00
COG0593Chromosomal replication initiation ATPase DnaAReplication, recombination and repair [L] 1.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms75.00 %
UnclassifiedrootN/A25.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001464|JGI12363J15224_100009All Organisms → cellular organisms → Bacteria42416Open in IMG/M
3300003267|soilL1_10075204All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1634Open in IMG/M
3300003322|rootL2_10301554All Organisms → cellular organisms → Bacteria1209Open in IMG/M
3300003324|soilH2_10109645All Organisms → cellular organisms → Bacteria1775Open in IMG/M
3300004114|Ga0062593_103412136Not Available510Open in IMG/M
3300004157|Ga0062590_102893550Not Available514Open in IMG/M
3300005289|Ga0065704_10357846All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300005290|Ga0065712_10071890All Organisms → cellular organisms → Bacteria → Acidobacteria5009Open in IMG/M
3300005293|Ga0065715_10850392Not Available592Open in IMG/M
3300005294|Ga0065705_10954220Not Available560Open in IMG/M
3300005330|Ga0070690_100547980All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300005331|Ga0070670_100035489All Organisms → cellular organisms → Bacteria4292Open in IMG/M
3300005338|Ga0068868_101819544Not Available576Open in IMG/M
3300005341|Ga0070691_10320856All Organisms → cellular organisms → Bacteria852Open in IMG/M
3300005344|Ga0070661_101271559Not Available617Open in IMG/M
3300005345|Ga0070692_10707336Not Available679Open in IMG/M
3300005353|Ga0070669_100022444All Organisms → cellular organisms → Bacteria4511Open in IMG/M
3300005353|Ga0070669_100547036All Organisms → cellular organisms → Bacteria965Open in IMG/M
3300005353|Ga0070669_101631778All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300005354|Ga0070675_100661729All Organisms → cellular organisms → Bacteria950Open in IMG/M
3300005365|Ga0070688_101287722Not Available590Open in IMG/M
3300005366|Ga0070659_100679922Not Available889Open in IMG/M
3300005440|Ga0070705_101086962Not Available654Open in IMG/M
3300005444|Ga0070694_100558214All Organisms → cellular organisms → Bacteria918Open in IMG/M
3300005455|Ga0070663_101757978All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300005468|Ga0070707_101560731All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300005539|Ga0068853_100172813All Organisms → cellular organisms → Bacteria1956Open in IMG/M
3300005543|Ga0070672_100355881All Organisms → cellular organisms → Bacteria1249Open in IMG/M
3300005544|Ga0070686_100135660All Organisms → cellular organisms → Bacteria1707Open in IMG/M
3300005546|Ga0070696_101093672Not Available670Open in IMG/M
3300005547|Ga0070693_101399902All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300005616|Ga0068852_100960642All Organisms → cellular organisms → Bacteria873Open in IMG/M
3300005618|Ga0068864_101783024All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300005718|Ga0068866_10138525All Organisms → cellular organisms → Bacteria1394Open in IMG/M
3300005844|Ga0068862_100768385Not Available939Open in IMG/M
3300006755|Ga0079222_10095377All Organisms → cellular organisms → Bacteria1546Open in IMG/M
3300006853|Ga0075420_100649948All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans910Open in IMG/M
3300009011|Ga0105251_10114735All Organisms → cellular organisms → Bacteria1225Open in IMG/M
3300009092|Ga0105250_10182245All Organisms → cellular organisms → Bacteria881Open in IMG/M
3300009093|Ga0105240_10919817All Organisms → cellular organisms → Bacteria940Open in IMG/M
3300009093|Ga0105240_12061778Not Available592Open in IMG/M
3300009148|Ga0105243_10051126All Organisms → cellular organisms → Bacteria3267Open in IMG/M
3300009148|Ga0105243_12180907All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300009174|Ga0105241_10099676All Organisms → cellular organisms → Bacteria2307Open in IMG/M
3300009174|Ga0105241_11402599All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300009174|Ga0105241_12345959Not Available532Open in IMG/M
3300009176|Ga0105242_12702640All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300009177|Ga0105248_11387642All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300009545|Ga0105237_11939213All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300010036|Ga0126305_10113733All Organisms → cellular organisms → Bacteria1643Open in IMG/M
3300010038|Ga0126315_10077942All Organisms → cellular organisms → Bacteria1861Open in IMG/M
3300010042|Ga0126314_10981986Not Available626Open in IMG/M
3300010045|Ga0126311_10000017All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes108459Open in IMG/M
3300010375|Ga0105239_12075468Not Available660Open in IMG/M
3300010375|Ga0105239_13173952All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300010397|Ga0134124_10854427All Organisms → cellular organisms → Bacteria → Acidobacteria913Open in IMG/M
3300010400|Ga0134122_10127439All Organisms → cellular organisms → Bacteria2048Open in IMG/M
3300010400|Ga0134122_10815423Not Available892Open in IMG/M
3300010401|Ga0134121_10030375All Organisms → cellular organisms → Bacteria4377Open in IMG/M
3300010403|Ga0134123_12610522Not Available572Open in IMG/M
3300011119|Ga0105246_10864763Not Available808Open in IMG/M
3300011119|Ga0105246_11396190Not Available653Open in IMG/M
3300011332|Ga0126317_10096084All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300013297|Ga0157378_10559253All Organisms → cellular organisms → Bacteria1150Open in IMG/M
3300013306|Ga0163162_10041725All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes4591Open in IMG/M
3300013306|Ga0163162_10259598All Organisms → cellular organisms → Bacteria1869Open in IMG/M
3300013306|Ga0163162_10430460All Organisms → cellular organisms → Bacteria1452Open in IMG/M
3300014325|Ga0163163_10536314All Organisms → cellular organisms → Bacteria1233Open in IMG/M
3300014325|Ga0163163_10621609Not Available1144Open in IMG/M
3300014745|Ga0157377_10206044All Organisms → cellular organisms → Bacteria1251Open in IMG/M
3300018476|Ga0190274_10795468Not Available1002Open in IMG/M
3300019487|Ga0187893_10480802All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300025899|Ga0207642_10347994All Organisms → cellular organisms → Bacteria873Open in IMG/M
3300025900|Ga0207710_10004285All Organisms → cellular organisms → Bacteria6246Open in IMG/M
3300025908|Ga0207643_10127981All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae1509Open in IMG/M
3300025911|Ga0207654_10053540All Organisms → cellular organisms → Bacteria2330Open in IMG/M
3300025911|Ga0207654_10443055All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300025911|Ga0207654_10469524All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300025918|Ga0207662_10643226Not Available740Open in IMG/M
3300025920|Ga0207649_10965326Not Available670Open in IMG/M
3300025922|Ga0207646_11199780All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300025923|Ga0207681_10018609All Organisms → cellular organisms → Bacteria4378Open in IMG/M
3300025924|Ga0207694_10865269All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300025925|Ga0207650_10000001All Organisms → cellular organisms → Bacteria → Acidobacteria1545726Open in IMG/M
3300025932|Ga0207690_10415769All Organisms → cellular organisms → Bacteria1075Open in IMG/M
3300025935|Ga0207709_10056332All Organisms → cellular organisms → Bacteria2433Open in IMG/M
3300025935|Ga0207709_11163435All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300025940|Ga0207691_10509994Not Available1021Open in IMG/M
3300025960|Ga0207651_10328027All Organisms → cellular organisms → Bacteria1282Open in IMG/M
3300025961|Ga0207712_10016105All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes4834Open in IMG/M
3300025981|Ga0207640_10079381All Organisms → cellular organisms → Bacteria2237Open in IMG/M
3300026075|Ga0207708_10512020All Organisms → cellular organisms → Bacteria1007Open in IMG/M
3300026095|Ga0207676_11229222All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300026095|Ga0207676_11326047All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300027514|Ga0208338_1000010All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes103680Open in IMG/M
3300028380|Ga0268265_10804595All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300028381|Ga0268264_10029334All Organisms → cellular organisms → Bacteria4504Open in IMG/M
3300028381|Ga0268264_10142050All Organisms → cellular organisms → Bacteria2142Open in IMG/M
3300031548|Ga0307408_101884460All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300031901|Ga0307406_11031995All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans707Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere12.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere9.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere7.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere7.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere7.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil5.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere5.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere5.00%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil4.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere4.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.00%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere2.00%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere2.00%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.00%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.00%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
Sugarcane Root And Bulk SoilHost-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil1.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001464Forest soil microbial communities from Browns Valley, California, USA, that are Nitrogen fertilized - NN91EnvironmentalOpen in IMG/M
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300003322Sugarcane root Sample L2Host-AssociatedOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011332Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019487White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaGEnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027514Forest soil microbial communities from Browns Valley, California, USA, that are Nitrogen fertilized - NN91 (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12363J15224_100009173300001464SoilMPPDVKKVKALQLNLEGLLRLLGGSSADKQKFLEMIIGITTPIEVKLINAQIEALSAHTKAVQGAAKSLQATAQQIAKRG*
soilL1_1007520413300003267Sugarcane Root And Bulk SoilMAGLDPKKIRALQLNLEGLFKLLGGSSDDKQRFLEMIIGITTPMEIKLINAQVDALAAHTKALQTGAKALQTSAQQIAKRG*
rootL2_1030155423300003322Sugarcane Root And Bulk SoilMPPDVKKVRALQLNLEGLFKLAGGSSEDKQRFLEMIIGITTPMEIKLINAQVDAMAAHAKAIQAGAKAIQTTAQQIARRG*
soilH2_1010964523300003324Sugarcane Root And Bulk SoilMPPDKKKVRALQLNLEGLLKLAGGSSDDKQRFLEMIIGITTPIEVRLVNAQVDAMAAHAKAITDGAKSLQATAQQIAKRG*
Ga0062593_10341213613300004114SoilMPPDVKKVKALQLNLEGLFRLLGGSSDDKQRFLEMIIGITTPMEVKLINAQVDALSAHTKALQTGAKALQTSAQQIAKRG*
Ga0062590_10289355013300004157SoilMPPDAKKVRALQLNLEGLFKLAGGSSNDKQRFLEMILGITTPIEVRLINAQVDAMAAHAKAIQDGAKALQSTAQQIAKGK*
Ga0065704_1035784623300005289Switchgrass RhizosphereMPPDSKKVRALQLNLEGLFKLLGGSSDDRQQFWEKIIGITTPVEVRLINAHLDTLAAQAKAMEAGAKSMQSSAQTIAKRG*
Ga0065712_1007189033300005290Miscanthus RhizosphereMPPDAKKVRALQLNLEGLFKLAGGSSDDKQRFLEMIIGITTPIEVKLINAQIDALSAHTKALQAGAKSLQATAQQIARRG*
Ga0065715_1085039213300005293Miscanthus RhizosphereMPPDPKKVKALQLNLEGLLRLLGGSSEDKQRFLEMIIGITTPMEVKLINAQVDALSAHTKAVQAGAKSLQTTAQQIAKRR*
Ga0065705_1095422013300005294Switchgrass RhizosphereERMPPDVKKVKALQLNIEGLLRLLGGSSDDKQRFLEMIIGITTPMEVKLINAQIDALAAHTKAVQTGAKALQSTAQQIAKRR*
Ga0070690_10054798023300005330Switchgrass RhizosphereMPPDAKKVRALQLNLEGLFKLAGGSSDDKQRFLEMILGITTPIEVRLVNGQIDAMAAHAKAIQDGAKALQSAAQQIAKRK*
Ga0070670_10003548913300005331Switchgrass RhizosphereMPPDVKKVKALQLNLEGLLRLLGGSSDDKQKFLEMIIGITTPMEVKLINGQIDALAAHTKAVQTGAKALQTTAQQIAKRR*
Ga0068868_10181954413300005338Miscanthus RhizosphereMPPDAKKVRALQLNLEGLFKLAGGSSEDKQRFLEMIIGITTPIEVRLINGQIDAMAAHAKAIQAGAKALQNSAQQIAKRG*
Ga0070691_1032085623300005341Corn, Switchgrass And Miscanthus RhizosphereMPPDKKKVRALQLNLEGIFKLAGGSSDDKQRFLEMIIGITTPIEVRLINAQVDAMAAHAKAIQDGAKSLQTAAQQIAKRG
Ga0070661_10127155913300005344Corn RhizosphereMPPDAKKVRALQLNLEGLFKLAGGSSDDKQRFLEMIIGITTPIEVRLINGQIDAMAAHAKAIQAGAKALQNSAQQIAKRG*
Ga0070692_1070733623300005345Corn, Switchgrass And Miscanthus RhizosphereLVQTEDLMPPDAKKVRALQLNLEGLFKLAGGSSDDKQRFLEMILGITTPIEVRLVNAQIDAMAAHAKAVQDGAKALQSASQQIAKRK*
Ga0070669_10002244423300005353Switchgrass RhizosphereMPPDKKKVRALQLNLEGIFKLAGGSSDDKQRFLELILGITTPIEIRLVNAQVDAMAAHAKAIQDGAKSLQTAAQQIAKRG*
Ga0070669_10054703623300005353Switchgrass RhizosphereMPPDVKKVRALQLNIEGLLKLAGGSSDDKQRFLEMIIGITTPIEVRLINAQVDAMAAHAKAIQDGAKSLQASAQQIAKRG*
Ga0070669_10163177823300005353Switchgrass RhizosphereMPPDAKKVRALQLNLEGLFKLAGGSSDDKQRFLEMILGITTPIEVRLVNGQIDAMAAHAKAIQDGAKALQSTAQQIAKRK*
Ga0070675_10066172923300005354Miscanthus RhizosphereMPPDVKKVRALQLNIEGLLKLAGGSSNDKERFLEMILGITTPIEVRLINGQIDAMAAHAKAIQAGAKALQNSAQQIAKRG*
Ga0070688_10128772213300005365Switchgrass RhizosphereNLEGLFKLAGGSSDDKQRFLEMIIGITTPIEVKLINAQIDALSAHTKALQAGAKSLQATAQQIARRG*
Ga0070659_10067992213300005366Corn RhizosphereMPPDRKKVRALQLNLEGLLKLAGGSSDDKQRFLEMIIGITTPTEVRLINAQVDAMAAHAKAIQDGAKSLQASAQQIAKRG*
Ga0070705_10108696223300005440Corn, Switchgrass And Miscanthus RhizosphereDVKKVRALQLNIEGLLKLAGGSSNDKERFLEMILGITTPIEVRLINGQIDAMAAHAKAIQAGAKALQNSAQQIAKRG*
Ga0070694_10055821423300005444Corn, Switchgrass And Miscanthus RhizosphereMPPDRKKVRALQLNLEGLLKLAGGSSDDKQRFLEMIIGITTPIEVRLINAQVDAMAAHAKAIQDGAKSLQASAQQIAKRG*
Ga0070663_10175797813300005455Corn RhizosphereMPPDKKKVRALQLNLEGIFKLAGGSSDDKQRFLEMIIGITTPIEVRLINAQVDAMAAHAKAIQDGAKSL
Ga0070707_10156073123300005468Corn, Switchgrass And Miscanthus RhizosphereMPPDPKKVRALQLNLEGLFKLLGGSSDDRQKFWEKIIGITTPVEIRLINAQLDALAAQAKAVQAGAKSMQSSAQQIAKRK*
Ga0068853_10017281323300005539Corn RhizosphereMPPDAKKVRALQLNLEGLFKLAGGSSDDKQRFLEMILGITTPIEVRLVNAQIDAMAAHAKAVQDGAKALQSASQQIAKRK*
Ga0070672_10035588123300005543Miscanthus RhizosphereMPPDAKKVRALQLNIEGLLKLAGGSSNDKERFLEMILGITTPIEVRLINGQIDAMAAHAKAIQAGAKALQNSAQQIAKRG*
Ga0070686_10013566013300005544Switchgrass RhizosphereMPPDPKKIKALQLNTEGLFRLLGGSADDREEFWGKIIGITTPVEVRLINAQVDALAAQAKSFGAAAKALQSTSQQIAKRG*
Ga0070696_10109367223300005546Corn, Switchgrass And Miscanthus RhizosphereMPPDAKKVRALQLNLEGLFKLAGGSADDKQRFLEMIIGITTPIEVRLINGQIDAMAAHAKAIQAGAKALQNSAQQIAKRG*
Ga0070693_10139990223300005547Corn, Switchgrass And Miscanthus RhizosphereMPPDRKKVRALQLNLEGLLKLAGGSSDDKQRFLEMILGITTPIEVRLVNGQIDAMAAHAKAIQDGAK
Ga0068852_10096064223300005616Corn RhizosphereMPPDKKKVRALQLNLEGIFKLAGGSSDDKQRFLEMIIGITTPMEVKLINAQVDALSAHTKAHQTGAKALQTSAQQIAKRG*
Ga0068864_10178302423300005618Switchgrass RhizosphereMPPDRKKVRALQLNLEGLLKLAGGSSDDKQRFLEMIIGITTPIEVRLINAQVDAMAAHAKAIQDGAKALQS
Ga0068866_1013852513300005718Miscanthus RhizosphereMPPDAKKVKALQLNLEGLLRLLGGSSDDKQRFLEMIIGITTPIEVRLINAQVDAMAAHAKAIQDGAKSLQASAQQIAKRG*
Ga0068862_10076838523300005844Switchgrass RhizospherePPDAKKVRALQLNLEGLFKLAGGSSDDKQRFLEMILGITTPIEVRLVNGQIDAMAAHAKAIQDGAKALQSTAQQIAKRK*
Ga0079222_1009537713300006755Agricultural SoilMPPDKKKVRALQLNLEGLFKLLGGSSDDKEQFLEKIIGITTPIEVKLINAQIDALSAHTKAVQAGAKALQNTAQQIAKRG*
Ga0075420_10064994823300006853Populus RhizosphereMPPDPKKVKAVQLNLEGLLRLLGGSSDDRQRFWEIHRGITTPIEVRLINSQLDSVANQAKALQNSAKALQDTAKQIARRG*
Ga0105251_1011473523300009011Switchgrass RhizosphereMPPDAKKVRALQLNLEGLFKLAGGSSDDKQKFLEMIIGITTPMEVKLINGQIDALAAHTKAVQTGAKALQTTAQQIAKRR*
Ga0105250_1018224523300009092Switchgrass RhizosphereMPPDPKKVKALQLNLEGLLRLLGGSRINKKKILEMIIGITTPMEVKLINAQVDALSAHTKAVQAGAKSLQTTAQQIAKRR*
Ga0105240_1091981723300009093Corn RhizosphereMPPDAKKVRALQLNLEGLFKLAGGSSDDKQRFLEMIIGITTPIEVRLVNAQIDAMTAHAKAVQDGVKALQGTAQQIAKRK*
Ga0105240_1206177823300009093Corn RhizosphereMPPDAKKVRALQLNLEGLFKLAGGSSDDKQRFLEMIIGITTPIEIRLINAQIDAMTAHAKAVQDGAKALQSTAHQIAKRR*
Ga0105243_1005112633300009148Miscanthus RhizosphereMPPDKKKVRALQLNLEGLLKLAGGSSDDKQRFLEMIIGITTPIEVRLINAQVDAMAAHAKAIQDGAKSLQASAQQIAKRG*
Ga0105243_1218090723300009148Miscanthus RhizosphereMPPDAKKVRALQLNLEGLFKLAGGSSDDKQRFLEMILGITTPIEVRLVNAQIDAMAAHAKAIQAGAKSLQASAQQIAKRG*
Ga0105241_1009967613300009174Corn RhizosphereMPPDVKKVKALQLNLEGLLRLLGGSSADKQKFLEMIIGITTPIEVKLINAQIDALSAHTKAVQGAAKSLQATAQQIAKRG*
Ga0105241_1140259913300009174Corn RhizosphereMPPDVKKVRALQLNIEGLLKLAGGSSNDKERFLEMIIGITTPIEVRLINGQIDAMAAHAKAIQAGAKALQNSAQQIAKRG*
Ga0105241_1234595913300009174Corn RhizosphereISTHIVQTEDLMPPDIKKLRALQLNIEGLFKLLGGSSDDRQRFLEIFISITTPIEIRLINAQVDALAVQAKALQTSAKALQTTAQQIARRG*
Ga0105242_1270264023300009176Miscanthus RhizosphereMPPDKKKVRALQLNLEGLLRLAGGSSDDKERFLEMIIGITTPIEVRLINAQVDAMAAHAKAIQDGAKALQASAQQIAKRG*
Ga0105248_1138764223300009177Switchgrass RhizosphereMPPDVKKVKALQLNLEGLLRLLGGSSADKQKFLEMIIGITTPIEVKLINAQIDALSAHTKAVQGAAKSLQATAQQ
Ga0105237_1193921323300009545Corn RhizosphereMPPDAKKVRALQLNLEGLFKLAGGSSDDKQRFLEMILGITTPIEVRLVNGQIDAMAAHAKAIQAGAKSLQ
Ga0126305_1011373323300010036Serpentine SoilMPPDAKKVRALQLNLEGLLRLLGGSADDKQKFLEMILGITTRIEVKLINAQVDALSAHTKAVQGAAKALQSTAQEIAKRG*
Ga0126315_1007794223300010038Serpentine SoilMPPDAKKVRALQLNLEGLLRLLGGSSDDKQRFLEMIIGITTPIEVKLINAQIEALSAHTKAVQTGAKALQATAQQIAKRG*
Ga0126314_1098198613300010042Serpentine SoilMPPDPKKVRALQLNLEGLLRLLGGSSEDKQRFLEMIIGITTPMEVKLINGQIDALAAHTKAVQAGAKALQSTAQQIARRG*
Ga0126311_10000017403300010045Serpentine SoilMPPDAKKVRALQLNLEGLLRLLGGSADDKQKFLETILGITTRMEVKLINAQVDALSAHTKAVQSAAKALQSTAQQIAKRG*
Ga0105239_1207546813300010375Corn RhizosphereMPPDAKKVRALQLNIEGLLKLAGGSSNDKERFLEMILGITTPMEVKLINGQIDALAAHTKAVQTGAKALQSTAQQIAKRR*
Ga0105239_1317395223300010375Corn RhizosphereMPPDAKKVRALQLNLEGLFKLAGGSSDDKQRFLEMILGITTPIEVRLVNGQIDAMAAHAKAIQDGAK
Ga0134124_1085442723300010397Terrestrial SoilMPPDAKKVRALQLNLEGLFKLAGGSSSDKERFLEMIIGITTPIEVRLINGQIDAMAAHAKAIQAGAKALQNSAQQIAKRG*
Ga0134122_1012743923300010400Terrestrial SoilMPPDPKKIRALQLNLEGLLRLAGGSSEDKQRFLEMIIGITTPMEVKLINAQVDALAAHTKAVQAGAKALQTTAQQIAKRG*
Ga0134122_1081542323300010400Terrestrial SoilMPPDAKKVRALQLNLEGLFKLAVGSADDKQRFLEMIIGITTPIEVRLINGQIDAMAAHAKAIQAGAKALQNSAQQIAKRG*
Ga0134121_1003037523300010401Terrestrial SoilMPPDVKKVRALQLNLEGLLKLLGGSSSDKEKFLEMILGITTPIEVKLINGQIEALSAHTKAIQAGAKSLQATAQQIAKRG*
Ga0134123_1261052213300010403Terrestrial SoilLEGLFRLLGGSSDDKQRFLEMIIGITTPMEVKLINAQVDALSAHTKALQTGAKALQTSAQQIAKRG*
Ga0105246_1086476323300011119Miscanthus RhizosphereALQLNLEGLFRLLGGSSDDKQRFLEMIIGITTPMEVKLINAQVDALSAHTKALQTGAKALQTSAQQIAKCG*
Ga0105246_1139619023300011119Miscanthus RhizosphereMPPDRKKVRALQLNLEGLLKLAAGSSDDKQRFLEMIIGITTPIEVRLINAQVDAMAAHAKAIQDGAKSLQASAQQIAKRG*
Ga0126317_1009608413300011332SoilMPPDAKKVKALQLNLEGLLRLLGGSSDDKQRFLEMIIGITTPIEVKLINAQIDALSAHTKAVQAGAKALQSTAQQIAKRG*
Ga0157378_1055925323300013297Miscanthus RhizosphereMPPDAKKVRALQLNLEGLFKLAGGSSDDKQRFLEMILGITTPIGVRLVKCQSDAMAAHAKAIQDGAKALQSAAQQIAKRK*
Ga0163162_1004172543300013306Switchgrass RhizosphereMPPDAKKVRALQLNLEGLLRLLGGSAEDKQKFLEMVLGITTRMEVKLINAQIDALSAHTKAVQAGAKSLQSTAQQIAKRG*
Ga0163162_1025959823300013306Switchgrass RhizosphereYPTCFQTEDLMPPDAKKVRALQLNLEGLFKLAGGSSDDKQRFLEMILGITTPIEVRLVNGQIDAMAAHAKAIQDGAKALQSAAQQIAKRK*
Ga0163162_1043046023300013306Switchgrass RhizosphereMPPDPKKVKALQLNLEGLLRLLGGSSEDKQRFLEMIIGITTPMEVKLINAQVDALSAHTIAVQAGAKSLQTTAQQI
Ga0163163_1053631413300014325Switchgrass RhizosphereEGLFKLAGGSSDDKQRFLEMILGITTPIEVRLVNAQIDAMAAHAKAVQDGAKALQSASQQIAKRK*
Ga0163163_1062160913300014325Switchgrass RhizosphereMPPDAKKVRALQLNIEGLLKLAGGSSNDKQRFLEMILGITTPIEVRLINAQVDAMAAHAKAIQDGAKALQTSAQQIAKRG*
Ga0157377_1020604413300014745Miscanthus RhizosphereMPPDRKKVRALQLNLEGLLKLAGGSSDDKQRFLEMIIGITTPMEVKLINGQIDALAAHTKAVQTGAKALQSTAQQIAKRR*
Ga0190274_1079546813300018476SoilMPPDAKKVRALQLNLEGLLRLLGGSAEDKQKFLETVLGITTRMEVKLINAQVDALTAHTKAVQTAAKALQSTAQQIAKRG
Ga0187893_1048080223300019487Microbial Mat On RocksNLEGLLRLLGGSADDRQRFWEIHRGITTPIEIRLINSQLDSVANQAKALQTSAKALQETAKQIARRG
Ga0207642_1034799423300025899Miscanthus RhizosphereMPPDRKKVRALQLNLEGLLKLAGGSSDDKQRFLEMIIGITTPIEVRLINAQVDAMAAHAKAIQDGAKSLQASAQQIAKRG
Ga0207710_1000428523300025900Switchgrass RhizosphereMPPDAKKVRALQLNLEGLFKLAGGSSDDKQRFLEMIIGITTPIEVKLINAQIDALSAHTKALQAGAKSLQATAQQIARRG
Ga0207643_1012798123300025908Miscanthus RhizosphereMPPDAKKVRALQLNLEGLFKLAGGSSEDKQRFLEMIIGITTPIEVRLINGQIDAMAAHAKAIQAGAKALQNSAQQIAKRG
Ga0207654_1005354013300025911Corn RhizosphereLMPPDAKKVRALQLNLEGLFKLAGGSSSDKERFLEMIIGITTPIEVRLINGQIDAMAAHAKAIQAGAKALQNSAQQIAKRG
Ga0207654_1044305523300025911Corn RhizosphereMPPDRKKVRALQLKLEGLLKLAGGSSDDKQRFLEMIIGITTPIEVRLINAQVDAMAAHAKAIQDGAKSLQASAQQIAKRG
Ga0207654_1046952413300025911Corn RhizosphereMPPDVKKVKALQLNLEGLFRLLGGSSDDKQRFLEMIIGITTPMEVKLINAQVDALSAHTKALQTGAKALQTSAQQIAKRG
Ga0207662_1064322623300025918Switchgrass RhizosphereMPPDRKKVRALQLNLEGLLKLAGGSSDDKQRFLEMIIGITTPIEVRLINGQIDAMAAHAKAIQAGAKALQNSAQQIAKRG
Ga0207649_1096532613300025920Corn RhizosphereMPPDAKKVRALQLNLEGLFKLAGGSSDDKQRFLEMIIGITTPIEVRLINGQIDAMAAHAKAIQAGAKALQNSAQQIAKRG
Ga0207646_1119978023300025922Corn, Switchgrass And Miscanthus RhizosphereMPPDPKKVRALQLNLEGLFKLLGGSSDDRQKFWEKIIGITTPVEIRLINAQLDALAAQAKAVQAGAKSMQSSAQQIAKRK
Ga0207681_1001860933300025923Switchgrass RhizosphereMPPDKKKVRALQLNLEGIFKLAGGSSDDKQRFLELILGITTPIEIRLVNAQVDAMAAHAKAIQDGAKSLQTAAQQIAKRG
Ga0207694_1086526923300025924Corn RhizosphereMPPDAKKVRALQLNLEGLFKLAGGSSDDKQRFLEMILGITTPIEVRLVNAQIDAMAAHAKAVQDGAKALQSASQQIAKRK
Ga0207650_100000013683300025925Switchgrass RhizosphereMPPDVKKVKALQLNLEGLLRLLGGSSDDKQKFLEMIIGITTPMEVKLINGQIDALAAHTKAVQTGAKALQTTAQQIAKRR
Ga0207690_1041576923300025932Corn RhizosphereMPPDAKKVRALQLNLEGLFKLAGGSSDDKQRFLEMIIGITTPTEVRLINAQVDAMAAHAKAIQDGAKSLQASAQQIAKRG
Ga0207709_1005633223300025935Miscanthus RhizosphereMPPDKKKVRALQLNLEGLLKLAGGSSDDKQRFLEMIIGITTPIEVRLINAQVDAMAAHAKAIQDGAKSLQASAQQIAKRG
Ga0207709_1116343513300025935Miscanthus RhizosphereMPPDAKKVRALQLNLEGLFKLAGGSSDDKQRFLEMILGITTPIEVRLVNGQIDAMAAHAKAIQAGAKSLQASAQQIAKRG
Ga0207691_1050999413300025940Miscanthus RhizosphereMPPDAKKVRALQLNIEGLLKLAGGSSNDKERFLEMILGITTPIEVRLINGQIDAMAAHAKAIQAGAKALQNSAQQIAKRG
Ga0207651_1032802713300025960Switchgrass RhizosphereEGLFKLAGGSSEDKQRFLEMIIGITTPIEVRLINGQIDAMAAHAKAIQAGAKALQNSAQQIAKRG
Ga0207712_1001610543300025961Switchgrass RhizosphereMPPDPKKVKALQLNLEGLLRLLGGSSEDKQRFLEMIIGITTPMEVKLINAQVDALSAHTKAVQAGAKSLQTTAQQIAKRR
Ga0207640_1007938123300025981Corn RhizosphereMPPDKKKVRALQLNLEGLLKLAGGSSDDKQRFLEMIIGITTPIEVRLINAQVDAMAAHAKAIQDGAKSLQTAAQQIAKRG
Ga0207708_1051202013300026075Corn, Switchgrass And Miscanthus RhizosphereMPPDPKKIRALQLNLEGLLRLAGGSSEDKQRFLEMIIGITTPIEVRLINGQIDAMAAHAKAIQAGAKALQNSAQQIAKRG
Ga0207676_1122922213300026095Switchgrass RhizosphereMPPDRKKVRALQLNLEGLLKLAGGSSDDKQRFLEMIIGITTPIEVRLINAQVDAMAAHAKAIQDGAKA
Ga0207676_1132604723300026095Switchgrass RhizosphereMPPDVKKVRALQLNLEGLFKLAGGSSDDKQRFLEMILGITTPIEVRLINAQVDAMAAHAKAIQDGAKALQTSAQQIAKRG
Ga0208338_1000010373300027514SoilMPPDVKKVKALQLNLEGLLRLLGGSSADKQKFLEMIIGITTPIEVKLINAQIEALSAHTKAVQGAAKSLQATAQQIAKRG
Ga0268265_1080459523300028380Switchgrass RhizosphereMPPDAKKVRALQLNLEGLFKLAGGSSDDKQRFLEMILGITTPIEVRLVNGQIDAMAAHAKAIQDGAKALQSTAQQIAKRK
Ga0268264_1002933433300028381Switchgrass RhizosphereMPPDAKKVRALQLNLEGLFKLAGGSSDDKQRFLEMILGITTPIEVRLVNGQIDAMAAHAKAIQDGAKALQSAAQQIAKRK
Ga0268264_1014205023300028381Switchgrass RhizosphereMPPDVKKVRALQLNIEGLLKLAGGSSNDKERFLEMILGITTPIEVRLINGQIDAMAAHAKAIQAGAKALQNSAQQIAKRG
Ga0307408_10188446023300031548RhizosphereMPPDPKKVKAVQLNLEGLLRLLGGSSDDRQRFWEIHRGITTPIEVRLINSQLDSVANQAKALQTSAKALQDTAKQIARRG
Ga0307406_1103199523300031901RhizosphereKAVQLNLEGLLRLLGGSSDDRQRFWEIHRGITTPIEVRLINSQLDSVANQAKALQTSAKALQDTAKQIARRG

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Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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