Metagenome / Metatranscriptome Family F105085

Basic Information
Family ID	F105085
Family Type	Metagenome / Metatranscriptome
Number of Sequences	100
Average Sequence Length	91 residues
Representative Sequence	MRKLLVITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEHPNMVHIDWHNGDWSELPLEKFERVELD
Number of Associated Samples	64
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	53
AlphaFold2 3D model prediction	No

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (72.000 % of family members)
Environment Ontology (ENVO)	Unclassified (72.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (100.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 47.42% β-sheet: 13.40% Coil/Unstructured: 39.18%
Feature Viewer

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Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF07087	DUF1353	19.00
PF00211	Guanylate_cyc	6.00
PF16473	Rv2179c-like	5.00
PF03104	DNA_pol_B_exo1	4.00
PF04055	Radical_SAM	2.00
PF07992	Pyr_redox_2	1.00
PF03721	UDPG_MGDP_dh_N	1.00
PF13192	Thioredoxin_3	1.00
PF09293	RNaseH_C	1.00
PF14743	DNA_ligase_OB_2	1.00
PF01764	Lipase_3	1.00
PF07642	BBP2	1.00
PF13661	2OG-FeII_Oxy_4	1.00
PF05226	CHASE2	1.00
PF01503	PRA-PH	1.00
PF03446	NAD_binding_2	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	6.00
COG0417	DNA polymerase B elongation subunit	Replication, recombination and repair [L]	4.00
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.00
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	1.00
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	1.00
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	1.00
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	1.00
COG4252	Extracytoplasmic sensor domain CHASE2 (specificity unknown)	Signal transduction mechanisms [T]	1.00

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Visualization

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Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	72.00%
Coastal	Environmental → Aquatic → Marine → Coastal	15.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified	11.00%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	2.00%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	72.00%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	15.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	11.00%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	2.00%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	72.00%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	15.00%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	11.00%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	2.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300007234	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA	Environmental	Open in IMG/M
3300007236	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300016734	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041410CS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016740	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041413YT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016766	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041409AS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016771	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071412BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016791	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041412BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016797	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041408BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017985	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018413	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019276	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101413AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019459	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020053	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)	Environmental	Open in IMG/M
3300020055	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020174	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041409US metaG (spades assembly)	Environmental	Open in IMG/M
3300020177	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041402US metaG (spades assembly)	Environmental	Open in IMG/M
3300020178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)	Environmental	Open in IMG/M
3300020188	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly)	Environmental	Open in IMG/M
3300020191	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)	Environmental	Open in IMG/M
3300020194	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)	Environmental	Open in IMG/M
3300020601	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011506CT metaG (spades assembly)	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022909	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG	Environmental	Open in IMG/M
3300022921	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG	Environmental	Open in IMG/M
3300022926	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG	Environmental	Open in IMG/M
3300022927	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG	Environmental	Open in IMG/M
3300022934	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG	Environmental	Open in IMG/M
3300023081	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG	Environmental	Open in IMG/M
3300023105	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M
3300024301	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504CT (spades assembly)	Environmental	Open in IMG/M
3300025630	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025818	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300028115	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501CT (spades assembly)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOWin2010_100083721	3300000117	Marine	MKKFLLILTLWSSTAMALDPLLVMHLWDNLRIVLSQETECVGKRYQFKASAQRMDGMYIPGCWYIMKEHPDMVHIDWHNGDYSELPLAKFEEVHLDK*
DelMOWin2010_102122682	3300000117	Marine	MRKLLVITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVEID*
Ga0075461_100197882	3300006637	Aqueous	MALDPLLVMHLWDNLRIVLSQETECVGKRYQFKASAQRMDGMYIPGCWYIMKEHPDMVHIDWHNGDYSELPLAKFEEIHLDK*
Ga0075461_102363182	3300006637	Aqueous	VITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVEID*
Ga0070749_1000098113	3300006802	Aqueous	MKKFLLILTLWSSTAMALDPLLVMHLWDNLRIVLSQETECVGKRYQFKASAQRMDGMYIPGCWYIMKEHPDMVHIDWHNGDYSELPLAKFEEIHLDK*
Ga0070749_101497012	3300006802	Aqueous	MRKLLLSFLIFWSFTAHALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEHPNMVHIDWHNGDWSELPLDKFEEFDVNQ*
Ga0070746_103924702	3300006919	Aqueous	MRKLLVITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFEEVGLD*
Ga0075460_101054693	3300007234	Aqueous	MRKLLLSFLIFWSFTAHALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVE
Ga0075460_101245612	3300007234	Aqueous	MASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVEID*
Ga0075463_101440351	3300007236	Aqueous	VMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVELD*
Ga0075463_101960912	3300007236	Aqueous	MASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEHPNMVHIDWHNGDWSELPLEKFEEFDVNQ*
Ga0099848_12507291	3300007541	Aqueous	MRKLLSSVLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGTKGQFKASAQRLDRLYIPGCWYVMKEHPNMVHIDWHNGDWSELPLEKFERFEID*
Ga0182092_10641383	3300016734	Salt Marsh	MRKLLVITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLFIPGCWYRMEEHPHMIHIDWHNGDWSELPLEQFEEVGLD
Ga0182092_15279122	3300016734	Salt Marsh	MRKLLVITLLLWTTMASALEPLLVMHLWQNLRVVLSQETQYDSKPGQFLASAQRMEGMYIPGCWYVMKEHPDMVHIDWHNGDWSELPLAKFEEVELD
Ga0182096_10523212	3300016740	Salt Marsh	MRKLLVITLLLWSTIASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEHPNMVHIDWHNGDWSELPLEKFEEVGLD
Ga0182091_15663852	3300016766	Salt Marsh	MRKLLVITLLLWTTMASALEPLLVMHLWQNLRVVLSQETQCDSKPGQFKASAQRMDGMYIPGCWYVMKEHPDMVHIDCHNGDWSELPLAKFEEVE
Ga0182082_14488602	3300016771	Salt Marsh	MRKLLVITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSE
Ga0182095_15617115	3300016791	Salt Marsh	SKMRKLLVITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLFIPGCWYRMEEHPHMIHIDWHNGDWSELPLEKFEEVGLD
Ga0182090_16673601	3300016797	Salt Marsh	MRKLLVITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLFIPGCWYRMEEHPHMIHIDWHNGDWSELPLEKFEEVELD
Ga0181565_102121032	3300017818	Salt Marsh	MKKILLILALWSSTAMALEPLLVMHLWDNLRIVLSQETECEGKRYQFKASAQRMDGMYIPGCWYVMKEHPEMIHIDWHNGDYSELPLAKFEEVQLDK
Ga0181565_104180521	3300017818	Salt Marsh	MKKFLLILTLWSSTAMALEPLLVMHLWQNLRVVLSQETQCDGKPGQFKASAQRLDGMYIPGCWYVMKEHSNMVHIDWHNGDWSELPLAKFEEVHLDK
Ga0181565_107045402	3300017818	Salt Marsh	MKKILLILALWSSTAMALEPLLVMHLWDNLRIVLSQETECEGKRYQFKASAQRMDGMYIPGCWHVMKEHPDMIHIDWHNGDYSELPLAKFEEVQLDK
Ga0181552_100787525	3300017824	Salt Marsh	MRKLLVITLFLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEHPNMVHIDWHNGDWSELPLEKFERVELD
Ga0181552_101059435	3300017824	Salt Marsh	IPYKQVGLQVHVQDLSKMRKLLVITLLLWTTMASALEPLLVMHLWQNLRVVLSQETQCDSKPGQFKASAQRMDGMYIPGCWYVMKEHPDMVHIDWHNGDWSELPLAKFEEVELD
Ga0181584_100497573	3300017949	Salt Marsh	MRKLLVITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEHPNMVHIDWHNGDWSELPLEKFERVELD
Ga0181584_100747254	3300017949	Salt Marsh	MRKLLVITLFLWTTMAHALEPLLVMHLWQNLRVVLSQETQCDSKPGQFKASAQRMDGMYIPGCWYVMKEHPDMVHIDWHNGDWSELPLAKFEEVELD
Ga0181607_100059479	3300017950	Salt Marsh	MANALEPLLVMHLWDNLRIVLSQETECEGKRYQFKASAQRMDGMYIPGCWYVMKEHPDMVHIDWHNGDYSELPLAKFDKVEIE
Ga0181607_100525905	3300017950	Salt Marsh	MRKLLVITLLLWTTMASALEPLLVMHLWQNLRVVLSQETQCDSKPGQFKASAQRMDGMYIPGCWYVMKEHPDMVHIDWHNGDWSELPLAKFEEVELD
Ga0181607_100580606	3300017950	Salt Marsh	RKLLVITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLFIPGCWYRMEEHPHMIHIDWHNGDWSELPLEKFEEVGLD
Ga0181607_104185382	3300017950	Salt Marsh	MKKFLLILTLWSSTVLALEPLLVMHLWDNLRIVLSQETECVGKRYQFKASAQRMDGMYIPGCWYIMKEHPDMVHIDWHNGDYSELPLAKFEEVHLEK
Ga0181607_107124912	3300017950	Salt Marsh	RKLLVITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVELD
Ga0181607_107202172	3300017950	Salt Marsh	KLLVITMLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVEID
Ga0181577_100269691	3300017951	Salt Marsh	MKKITLLILLFWTLTVNALEPLLVMYIYDGLRVVLSQETECEDKPKGYMKASAQRIDGLYIPGCWYFMKEYPNMIHIDWHNGDFSELPYDKFEQVELQ
Ga0181583_102805723	3300017952	Salt Marsh	MRKLLVITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFEEVGLD
Ga0181583_103389271	3300017952	Salt Marsh	KLLVITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEHPNMVHIDWHNGDWSELPLEKFERVELD
Ga0181571_100552214	3300017957	Salt Marsh	MALEPLLVMHLWQNLRVVLSQETQCDGKPGQFKASAQRLDGMYIPGCWYVMKEHSNMVHIDWHNGDWSELPLAKFEEVHLDK
Ga0181589_100980941	3300017964	Salt Marsh	VGLQVHDQDHSKMRKLLVITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVELD
Ga0181590_101678812	3300017967	Salt Marsh	MRKLLVITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVELD
Ga0181590_104969553	3300017967	Salt Marsh	ASALEPLLVMHLWQNLRVVLSQETQCDSKPGQFKASAQRMDGMYIPGCWYVMKEHPDMVHIDWHNGDWSELPLAKFEEVELD
Ga0181587_101915673	3300017968	Salt Marsh	MRKLLVITLFLWTTMAHALEPLLVMHLWQNLRVVLSQETQCDSKPGQFKASAQRMDGMYIPGCWYVMKEHPDMVHIDWHNGDYSELPLAKFEEVELD
Ga0181576_100645422	3300017985	Salt Marsh	HLWDNLRIVLSQETECEGKRYQFKASAQRMDGMYIPGCWYVMKEHPEMIHIDWHNGDYSELPLAKFEEVQLDK
Ga0181569_107396312	3300017986	Salt Marsh	MKKILLILALWSSTAMALEPLLVMHLWDNLRIVLSQETECEGKRYQFKASAQRMDGMYIPGCWYVMKEHPDMIHIDWHNGDYSELPLAKFEEVQLDK
Ga0181600_104598722	3300018036	Salt Marsh	LWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLFIPGCWYRMEEHPHMIHIDWHNGDWSELPYEKFEKVDSK
Ga0181600_105835502	3300018036	Salt Marsh	LEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVEID
Ga0181601_105712381	3300018041	Salt Marsh	LLVITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLFIPGCWYRMEEHPHMIHIDWHNGDWSELPLEKFEEVGLD
Ga0181601_106772802	3300018041	Salt Marsh	WSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVEID
Ga0181606_100668001	3300018048	Salt Marsh	HDQDHSKMRKLLVITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLFIPGCWYRMEEHPHMIHIDWHNGDWSELPLEKFEEVGLD
Ga0181606_104598681	3300018048	Salt Marsh	STAMALDPLLVMHLWDNLRIVLSQETECVGKRYQFKASAQRMDGMYIPGCWYIMKEHPDMVHIDWQNGDYSELPLAKFEEVHLEK
Ga0181560_102821512	3300018413	Salt Marsh	MAHALEPLLVMHLWQNLRVVLSQETQCDGKPGQFKASAQRLDGMYVPGCWYVMKEYPDMVHIDWHNGDYSELPLAKFEEVEIE
Ga0181553_100800384	3300018416	Salt Marsh	MRKLLVITLFLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVELD
Ga0181567_101634304	3300018418	Salt Marsh	MALEPLLVMHLWQNLRVVLSQETQCDGKPGQFKASAQRLDGMYVPGCWYVMKEYPDMVHIDWHNGDYSELPLAKFEEVHLDK
Ga0181563_106828782	3300018420	Salt Marsh	MRKLLVITLFLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEK
Ga0181593_100267831	3300018423	Salt Marsh	LVITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVELD
Ga0181591_104651582	3300018424	Salt Marsh	MLSWTTMANALEPLLVMHLWDNLRIVLSQETECEGKRYQFKASAQRMDGMYIPGCWYVMKEHPDMVHIDWHNGDYSELPLAKFDKVEIE
Ga0181568_108039162	3300018428	Salt Marsh	PLLVMHLWDNLRIVLSQETECEGKRYQFKASAQRMDGMYIPGCWYVMKEHPEMIHIDWHNGDYSELPLAKFEEVQLDK
Ga0181568_109742831	3300018428	Salt Marsh	MAHALEPLLVMHLWQNLRVVLSQETQCDGKLGQFKASAQRLDGMYVPGCWYVMKEYPDMVHIDWHNGDYSELPLAKFEEVEIE
Ga0182067_12699512	3300019276	Salt Marsh	MKKILLILALWSSTAMALEPLLVMHLWDNLRIVLSQETECEGKRYQFKASAQRMDGMYIPGCWHVMKEHPDMIHIDWHNGDYSELPLAKF
Ga0181562_100729943	3300019459	Salt Marsh	MASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVELD
Ga0181595_101353111	3300020053	Salt Marsh	SALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEHPNMVHIDWHNGDWSELPLEKFERVKID
Ga0181575_101902791	3300020055	Salt Marsh	LVMHLWDNLRIVLSQETECEGKRYQFKASAQRMDGMYIPGCWHVMKEHPDMIHIDWHNGDYSELPLAKFEEVQLDK
Ga0181603_100286934	3300020174	Salt Marsh	MRKLLVITMLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVEID
Ga0181603_100979612	3300020174	Salt Marsh	MRKLLVITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLFIPGCWYRMEEHPHMIHIDWHNGDWSELPLEKFEEVGLD
Ga0181603_101313873	3300020174	Salt Marsh	MRKLLVITLLLWSTIASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEHPNMVHIDWHNGDWSELPLEKFERVKID
Ga0181603_102373132	3300020174	Salt Marsh	ITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVELD
Ga0181596_101340833	3300020177	Salt Marsh	DQDHSKMRKLLVITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLFIPGCWYRMEEHPHMIHIDWHNGDWSELPLEKFEEVGLD
Ga0181596_101835281	3300020177	Salt Marsh	KKLLLITMLSWTTMANALEPLLVMHLWDNLRIVLSQETECEGKRYQFKASAQRMDGMYIPGCWYVMKEHPDMVHIDWHNGDYSELPLAKFDKVEIE
Ga0181599_12178384	3300020178	Salt Marsh	PYKQVGLQVHDQDHSKMRKLLVITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLFIPGCWYRMEEHPHMIHIDWHNGDWSELPLEKFEEVGLD
Ga0181605_101550893	3300020188	Salt Marsh	LVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEHPNMVHIDWHNGDWSELPLEKFERVKID
Ga0181605_103211401	3300020188	Salt Marsh	LVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVEID
Ga0181604_100855007	3300020191	Salt Marsh	LVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVELD
Ga0181604_101288901	3300020191	Salt Marsh	ASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLFIPGCWYRMEEHPHMIHIDWHNGDWSELPLEKFEEVGLD
Ga0181597_100925883	3300020194	Salt Marsh	MALDPLLVMHLWDNLRIVLSQETECVGKRYQFKASAQRMDGMYIPGCWYIMKEHPDMVHIDWQNGDYSELPLAKFEEVHLEK
Ga0181557_11002584	3300020601	Salt Marsh	LVITLFLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVELD
Ga0222716_1000060920	3300021959	Estuarine Water	MRKLLLTIVLLWTVSAQAALQPLLVLHLYDNLRIVLSQETECEGKKGVYKASAQRLDKKYIPGCWYVMKEYPNMIHIDWHNGDYSELPLEKFEEFDVNQ
Ga0222716_100844993	3300021959	Estuarine Water	MRKLLLSFLIFWSFTAHALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDKLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVELD
Ga0222715_101254433	3300021960	Estuarine Water	RIVLSQETECEGKKGVYKASAQRLDKKYIPGCWYVMKEYPNMIHIDWHNGDYSELPLDKFEAFDVNQ
Ga0222715_101334572	3300021960	Estuarine Water	MRKLLLSVLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVEID
Ga0222715_102520124	3300021960	Estuarine Water	ALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEHPNMVHIDWHNGDWSELPLDKFEEFDVNQ
Ga0222715_105117912	3300021960	Estuarine Water	MRKLLLSFLIFWSFTAHALEPLLVMHLYSNLRIVLSQETECEGQKGQFKASAQRLDRLYIPGCWYVMKEHPNMVHIDWHNGDWSELPLEKFEEFD
Ga0222715_107184662	3300021960	Estuarine Water	MKKLLIAIILFWSVTAQALQPLLVMHLYANLRIVLSQETECEGKKGQFKASAQRLDRLFIPGCWYVMKEYPNMIHIDWHNGDYS
Ga0222714_100398695	3300021961	Estuarine Water	MRKLLLSFLIFWSFTAHALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVELD
Ga0222714_100548554	3300021961	Estuarine Water	MRKLLLATLLIWTLSAQAALKPLLVMHLYDNLRIVLSQETECEGKKGVYKASAQRLDKKYIPGCWYVMKEYPNMIHIDWHNGDYSELPLDKFEAFDVNQ
Ga0222714_106121882	3300021961	Estuarine Water	MRKLLLSFLIFWSFTAHALEPLLVMHLYSNLRIVLSQETECEGQKGQFKASAQRLDRLYIPGCWYVMKEHPNMVHIDWHNGDWSELPLDKFEEFDVNQ
Ga0222719_106876372	3300021964	Estuarine Water	WTVSAQAALQPLLVMHLYDNLRIVLSQETECDGKKGVYKASAQRLDKKYIPGCWYVMKEYPNMIHIDWHNGDYSELPLAKFEEFDVNQ
Ga0255755_12900493	3300022909	Salt Marsh	NLRVVLSQETQCDSKPGQFKASAQRMDGMYIPGCWYVMKEHPDMVHIDWHNGDWSELPLAKFEEVELD
Ga0255765_11853261	3300022921	Salt Marsh	LWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVEID
Ga0255753_11752563	3300022926	Salt Marsh	MRKLLVITLLLWSTIASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEHPNMVHIDWHNGDWSELPLEKFE
Ga0255769_102258843	3300022927	Salt Marsh	IMKKLLLITMLSWTTMANALEPLLVMHLWDNLRIVLSQETECEGKRYQFKASAQRMDGMYIPGCWYVMKEHPDMVHIDWHNGDYSELPLAKFDKVEIE
Ga0255781_101943852	3300022934	Salt Marsh	MKKILLILALWSSTAMALEPLLVMHLWDNLRIVLSQETECEGKRYQFKASAQRMDGMYIPGCWYVMKEHPDMIHIDWHNGDYSELPLAKFEEVQLEK
Ga0255764_101750853	3300023081	Salt Marsh	ALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEHPNMVHIDWHNGDWSELPLEKFERVELD
Ga0255764_103101371	3300023081	Salt Marsh	MRKLLVITLFLWTTMAHALEPLLVMHLWQNLRVVLSQETECEGKRYQFKASAQRMDGMYIPGCWYVMKEHPDMVHIDWHNGDWSELPLA
Ga0255782_101440881	3300023105	Salt Marsh	MKKFLLILTLWSSTAMALEPLLVMHLWQNLRVVLSQETQCDGKPGQFKASAQRLDGMYIPGCWYVMKEHSNMVHIDWHNGDWS
Ga0255772_100456705	3300023176	Salt Marsh	MRKLLVITLFLWTTMAHALEPLLVMHLWQNLRVVLSQETQCDSKPGQFKASAQRMDGMYIPGCWYVMKEHPDMVHIDWHNGDW
Ga0233451_101738213	3300024301	Salt Marsh	MRKLLVITLLLWTTMASALEPLLVMHLWQNLRVVLSQETQCDSKPGQFKASAQRMDGMYIPGCWYVMKEHPDMVHIDWHNGDWSEL
Ga0208004_10123962	3300025630	Aqueous	MALDPLLVMHLWDNLRIVLSQETECVGKRYQFKASAQRMDGMYIPGCWYIMKEHPDMVHIDWHNGDYSELPLAKFEEIHLDK
Ga0208543_10638201	3300025810	Aqueous	LVITLLLWSTIASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEHPNMVHIDWHNGDWSELPLEKFERVEID
Ga0208542_12006042	3300025818	Aqueous	MRKLLVITLLLWSTMASALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEYPNMVHIDWHNGDWSELPLEKFERVEID
Ga0208644_10013696	3300025889	Aqueous	MKKFLLILTLWSSTAMALDPLLVMHLWDNLRIVLSQETECVGKRYQFKASAQRMDGMYIPGCWYIMKEHPDMVHIDWQNGDYSELPLAKFEEIHLDK
Ga0208644_13261291	3300025889	Aqueous	MRKLLLSFLIFWSFTAHALEPLLVMHLYSNLRIVLSQETECEGKKGQFKASAQRLDRLYIPGCWYVMKEHPNMVHIDWHNGDWSELPLDKFEEFDVNQ
Ga0233450_100722493	3300028115	Salt Marsh	MRKLLVITLLLWTTIASALEPLLVMHLWQNLRVVLSQETQCDSKPGQFKASAQRMDGMYIPGCWYVMKEHPDMVHIDWHNGDWSELPLAKFEEVELD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F105085

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences