NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F105148

Metagenome / Metatranscriptome Family F105148

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105148
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 47 residues
Representative Sequence MEMIELTQKEIRALLTFMECRDVEEWSEVLDLPELLTLHSKLTSAQTY
Number of Associated Samples 60
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Viruses
% of genes with valid RBS motifs 8.00 %
% of genes near scaffold ends (potentially truncated) 43.00 %
% of genes from short scaffolds (< 2000 bps) 87.00 %
Associated GOLD sequencing projects 50
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Predicted Viral (38.000 % of family members)
NCBI Taxonomy ID 10239 (predicted)
Taxonomy All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(50.000 % of family members)
Environment Ontology (ENVO) Unclassified
(53.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(89.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 77.08%    β-sheet: 0.00%    Coil/Unstructured: 22.92%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF01555N6_N4_Mtase 2.00
PF136402OG-FeII_Oxy_3 1.00
PF02672CP12 1.00
PF136612OG-FeII_Oxy_4 1.00
PF137592OG-FeII_Oxy_5 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0863DNA modification methylaseReplication, recombination and repair [L] 2.00
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 2.00
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 2.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms78.00 %
UnclassifiedrootN/A22.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10220780All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → Acinetobacter baumannii594Open in IMG/M
3300000116|DelMOSpr2010_c10268203All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → Acinetobacter baumannii512Open in IMG/M
3300001831|ACM4_1023186Not Available773Open in IMG/M
3300006025|Ga0075474_10138766All Organisms → Viruses767Open in IMG/M
3300006026|Ga0075478_10006534All Organisms → Viruses → Predicted Viral4054Open in IMG/M
3300006026|Ga0075478_10204942All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae601Open in IMG/M
3300006561|Ga0101389_1005169Not Available624Open in IMG/M
3300006637|Ga0075461_10103387All Organisms → Viruses895Open in IMG/M
3300006637|Ga0075461_10253366All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae516Open in IMG/M
3300006802|Ga0070749_10032942All Organisms → Viruses → Predicted Viral3220Open in IMG/M
3300006802|Ga0070749_10115517All Organisms → Viruses → Predicted Viral1579Open in IMG/M
3300006802|Ga0070749_10174668All Organisms → Viruses → Predicted Viral1239Open in IMG/M
3300006802|Ga0070749_10212622All Organisms → Viruses → Predicted Viral1105Open in IMG/M
3300006867|Ga0075476_10065945All Organisms → Viruses → Predicted Viral1437Open in IMG/M
3300006867|Ga0075476_10108739All Organisms → Viruses → Predicted Viral1061Open in IMG/M
3300006868|Ga0075481_10066541All Organisms → Viruses → Predicted Viral1364Open in IMG/M
3300006868|Ga0075481_10302362Not Available557Open in IMG/M
3300006868|Ga0075481_10359070All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → Acinetobacter baumannii502Open in IMG/M
3300006869|Ga0075477_10090609All Organisms → Viruses → Predicted Viral1316Open in IMG/M
3300006870|Ga0075479_10374970All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → Acinetobacter baumannii551Open in IMG/M
3300006916|Ga0070750_10137282All Organisms → Viruses → Predicted Viral1113Open in IMG/M
3300006916|Ga0070750_10231511All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae808Open in IMG/M
3300006919|Ga0070746_10137089All Organisms → Viruses → Predicted Viral1199Open in IMG/M
3300006919|Ga0070746_10538194All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae508Open in IMG/M
3300007236|Ga0075463_10289199Not Available526Open in IMG/M
3300007345|Ga0070752_1392146Not Available514Open in IMG/M
3300007345|Ga0070752_1394180Not Available512Open in IMG/M
3300007346|Ga0070753_1091586All Organisms → Viruses → Predicted Viral1195Open in IMG/M
3300007346|Ga0070753_1204663All Organisms → Viruses729Open in IMG/M
3300007346|Ga0070753_1334536All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales536Open in IMG/M
3300007538|Ga0099851_1229520All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae669Open in IMG/M
3300007538|Ga0099851_1302855Not Available564Open in IMG/M
3300007539|Ga0099849_1032846All Organisms → Viruses → Predicted Viral2215Open in IMG/M
3300007539|Ga0099849_1295275Not Available586Open in IMG/M
3300007542|Ga0099846_1123536All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae944Open in IMG/M
3300008012|Ga0075480_10500298Not Available585Open in IMG/M
3300010296|Ga0129348_1303236Not Available533Open in IMG/M
3300010297|Ga0129345_1169725Not Available783Open in IMG/M
3300010389|Ga0136549_10110239All Organisms → Viruses → Predicted Viral1282Open in IMG/M
3300012967|Ga0129343_1348654Not Available583Open in IMG/M
3300017949|Ga0181584_10220901All Organisms → Viruses → Predicted Viral1238Open in IMG/M
3300017949|Ga0181584_10264453All Organisms → Viruses → Predicted Viral1110Open in IMG/M
3300017949|Ga0181584_10530978All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae720Open in IMG/M
3300017949|Ga0181584_10869666All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → Acinetobacter baumannii530Open in IMG/M
3300017949|Ga0181584_10923320All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → Acinetobacter baumannii511Open in IMG/M
3300017951|Ga0181577_10247090All Organisms → Viruses → Predicted Viral1174Open in IMG/M
3300017951|Ga0181577_10744358Not Available594Open in IMG/M
3300017956|Ga0181580_10704196All Organisms → Viruses642Open in IMG/M
3300017962|Ga0181581_10495841All Organisms → Viruses755Open in IMG/M
3300017962|Ga0181581_10580806Not Available684Open in IMG/M
3300017962|Ga0181581_10860818All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae537Open in IMG/M
3300017964|Ga0181589_10861689All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae558Open in IMG/M
3300017967|Ga0181590_10087364All Organisms → Viruses → Predicted Viral2449Open in IMG/M
3300017967|Ga0181590_10146367All Organisms → Viruses → Predicted Viral1811Open in IMG/M
3300017968|Ga0181587_10137040All Organisms → Viruses → Predicted Viral1735Open in IMG/M
3300017968|Ga0181587_10590907All Organisms → Viruses711Open in IMG/M
3300017969|Ga0181585_10525953All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae791Open in IMG/M
3300017969|Ga0181585_11056623All Organisms → Viruses516Open in IMG/M
3300018049|Ga0181572_10103554All Organisms → Viruses → Predicted Viral1877Open in IMG/M
3300018421|Ga0181592_10859566All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes593Open in IMG/M
3300018421|Ga0181592_11072436Not Available516Open in IMG/M
3300018424|Ga0181591_10352013All Organisms → Viruses → Predicted Viral1109Open in IMG/M
3300018424|Ga0181591_10360524All Organisms → Viruses → Predicted Viral1092Open in IMG/M
3300018424|Ga0181591_11160624Not Available517Open in IMG/M
3300019708|Ga0194016_1015667All Organisms → Viruses816Open in IMG/M
3300019726|Ga0193974_1066307All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae505Open in IMG/M
3300019751|Ga0194029_1005893All Organisms → Viruses → Predicted Viral1659Open in IMG/M
3300019756|Ga0194023_1014546All Organisms → Viruses → Predicted Viral1588Open in IMG/M
3300019756|Ga0194023_1069177All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae709Open in IMG/M
3300019765|Ga0194024_1004751All Organisms → Viruses → Predicted Viral2789Open in IMG/M
3300019765|Ga0194024_1023427All Organisms → Viruses → Predicted Viral1325Open in IMG/M
3300019765|Ga0194024_1135348All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → Acinetobacter baumannii574Open in IMG/M
3300021335|Ga0213867_1001374All Organisms → Viruses10844Open in IMG/M
3300021364|Ga0213859_10036624All Organisms → Viruses → Predicted Viral2324Open in IMG/M
3300021364|Ga0213859_10124812All Organisms → Viruses → Predicted Viral1217Open in IMG/M
3300021425|Ga0213866_10339037All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae745Open in IMG/M
3300021425|Ga0213866_10366264All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae709Open in IMG/M
3300022067|Ga0196895_1007272All Organisms → Viruses → Predicted Viral1176Open in IMG/M
3300022187|Ga0196899_1005032All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes5674Open in IMG/M
3300022187|Ga0196899_1048597All Organisms → Viruses → Predicted Viral1401Open in IMG/M
3300022187|Ga0196899_1130550All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → Acinetobacter baumannii715Open in IMG/M
3300022198|Ga0196905_1076072All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae919Open in IMG/M
3300022937|Ga0255770_10237449All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae885Open in IMG/M
3300023084|Ga0255778_10057677All Organisms → Viruses → Predicted Viral2393Open in IMG/M
3300023116|Ga0255751_10262671Not Available922Open in IMG/M
3300023173|Ga0255776_10037681All Organisms → Viruses → Predicted Viral3890Open in IMG/M
3300023180|Ga0255768_10046980All Organisms → Viruses → Predicted Viral3231Open in IMG/M
3300025653|Ga0208428_1033336All Organisms → Viruses → Predicted Viral1633Open in IMG/M
3300025674|Ga0208162_1157519All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae616Open in IMG/M
3300025674|Ga0208162_1204218Not Available500Open in IMG/M
3300025687|Ga0208019_1012802All Organisms → Viruses → Predicted Viral3500Open in IMG/M
3300025687|Ga0208019_1113166Not Available815Open in IMG/M
3300025687|Ga0208019_1123153All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae765Open in IMG/M
3300025771|Ga0208427_1279358All Organisms → Viruses505Open in IMG/M
3300025840|Ga0208917_1208015Not Available648Open in IMG/M
3300025840|Ga0208917_1208554Not Available647Open in IMG/M
3300025853|Ga0208645_1121340All Organisms → Viruses → Predicted Viral1042Open in IMG/M
3300025889|Ga0208644_1039234All Organisms → Viruses → Predicted Viral2738Open in IMG/M
3300027917|Ga0209536_102212552All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae655Open in IMG/M
3300034375|Ga0348336_157707Not Available664Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous50.00%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh29.00%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater6.00%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater5.00%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine3.00%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment2.00%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.00%
Marine PlanktonEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton1.00%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment1.00%
Marine Methane Seep SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300001831Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM4, ROCA_DNA074_0.2um_10lEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006561Marine microbial communities from the Black Sea in Odessa region - Od_1EnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006870Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007236Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010389Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsfEnvironmentalOpen in IMG/M
3300012967Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017956Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017962Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017964Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017968Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017969Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018049Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019708Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_2-3_MGEnvironmentalOpen in IMG/M
3300019726Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_10-11_MGEnvironmentalOpen in IMG/M
3300019751Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MGEnvironmentalOpen in IMG/M
3300019756Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MGEnvironmentalOpen in IMG/M
3300019765Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MGEnvironmentalOpen in IMG/M
3300021335Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540EnvironmentalOpen in IMG/M
3300021364Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304EnvironmentalOpen in IMG/M
3300021425Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284EnvironmentalOpen in IMG/M
3300022067Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v3)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022937Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaGEnvironmentalOpen in IMG/M
3300023084Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaGEnvironmentalOpen in IMG/M
3300023116Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaGEnvironmentalOpen in IMG/M
3300023173Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaGEnvironmentalOpen in IMG/M
3300023180Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaGEnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025687Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025771Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025840Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1022078033300000116MarineMEMIALTQKEIRALLTFMECRDVEEWSEVLDLPELLTLHSKLTSAQTY*
DelMOSpr2010_1026820323300000116MarineMEMIALTQKEIRALLTFMECRDVEEWSDVLDLPELLTLHSKLTSAQTY*
ACM4_102318643300001831Marine PlanktonMEMVELSQKEIRALLTFMECRDVEEWSEILDLPELLTLHSKLTSAQTY*
Ga0075474_1013876643300006025AqueousMEMIALTQKEIRALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY*
Ga0075478_1000653473300006026AqueousMEMIELTQKEIRALLTFMECRDVEEWSDVLDLPELLTLHSKLTSAQTY*
Ga0075478_1020494223300006026AqueousMEMIALTQKEIRALLTFMECRDVEEWSEVLDLPELLILHSKLSSAQTY*
Ga0101389_100516923300006561MarineMEMIELTQKEIGALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY*
Ga0075461_1010338713300006637AqueousMIALTQKEIEALLTFMECRDVEEWSEILDLPELLTLHSKLTSAQTY*
Ga0075461_1025336623300006637AqueousMEMVELSQKEIRALITFMESRDVEEWSEILDLPELITLHTKLHESQTY*
Ga0070749_1003294213300006802AqueousMEMIALTQKEIGALLTFMECHDVEEWFEVLDLPELLTLHSKLTSAQTY*
Ga0070749_1011551733300006802AqueousMEMVELSQKEIRALLTFMECRDVEEWSEVLDLPELLTLHSKLTNAQTY*
Ga0070749_1017466813300006802AqueousMEMIALTQKEIRALLTFMECRDVEEWSEVLDLPELLTLHSKLSSAQTY*
Ga0070749_1021262213300006802AqueousPTVFVLMEMIELTQKEIRALLTFMECRDVEEWSDVLDLPELLTLHSKLTSAQTY*
Ga0075476_1006594573300006867AqueousPTIQPTVFVLMEMIELTQKEIRALLTFMECRDVEEWSDVLDLPELLTLHSKLTSAQTY*
Ga0075476_1010873913300006867AqueousMEMIVLTQKEIKALLTFMECRDVEEWSEVLDLPELLTLHSKLTSAQTY*
Ga0075481_1006654153300006868AqueousMIALTQKEIRALLTFMECHDVEEWFEVLDLPELLTLHSKLTSAQTY*
Ga0075481_1030236213300006868AqueousPTIQPTVFVLMEMIALTQKEIRALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY*
Ga0075481_1035907023300006868AqueousMEMIALTQKEIGALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY*
Ga0075477_1009060973300006869AqueousLLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY*
Ga0075479_1037497033300006870AqueousMEMIELTQKEIRALLTFMECRDVEEWSEVLDLPELLTLHSKLTSAQTY*
Ga0070750_1013728233300006916AqueousMDPPTIQPTVFVLMEMIELTQKEIRALLTFMECRDVEEWSDVLDLPELLTLHSKLTSAQTY*
Ga0070750_1023151143300006916AqueousVFVLMEMIALTQKEIGALLTFMECHDVEEWSDILDVPELLTLHSKLTSAQTY*
Ga0070746_1013708913300006919AqueousMEMIALTQKEIGALLTFMECRDVEEWSEVLDLPELLTLHSKLTS
Ga0070746_1053819433300006919AqueousMEMIELTQKEIRALLTFMECRDVEEWSEVLDLPELLTL
Ga0075463_1028919933300007236AqueousIQPTVFVLMEMIALTQKEIRALLTFMECHDVEEWFEVLDLPELLTLHSKLTSAQTY*
Ga0070752_139214633300007345AqueousSSTIQPTVFVLMEMIELTQKEIGALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY*
Ga0070752_139418033300007345AqueousIQPTVFVLMEMIALTQKEIRALLTFMECRDVEEWSEVLDLPELLTLHSKLTSAQTY*
Ga0070753_109158613300007346AqueousTIQPTVFVLMEMIALTQKEIRALLTFMECRDVEEWSEVLDLPELLTLHSKLTSAQTY*
Ga0070753_120466313300007346AqueousMEMIELTQKEIEALLTFMECRDVEEWSEILDLPELLTLH
Ga0070753_133453613300007346AqueousMEMIALTQKEIEALLTFMECRDVEEWSEILDLPELLTLH
Ga0099851_122952033300007538AqueousMEMIELTQKEIKALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY*
Ga0099851_130285523300007538AqueousALTQKEIGALLTFMECRDVEEWSDILDVPELLTLHSKLTSAQTY*
Ga0099849_103284663300007539AqueousMEMIELTQKEIRALLTFMECRDVEEWSEVLDLPELLTLHSKLSSAQTY*
Ga0099849_129527533300007539AqueousMEMIELTQKEIKALLTFMECRDVEEWSEVLDLPELLTLHSKLTSAQTY*
Ga0099846_112353623300007542AqueousMIELTQKEIGALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY*
Ga0075480_1050029833300008012AqueousVLMEMVELSQKEIRALITFMESRDVEEWSEILDLPELITLHTKLHESQTY*
Ga0129348_130323633300010296Freshwater To Marine Saline GradientLMEMIELTQKEIGALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY*
Ga0129345_116972513300010297Freshwater To Marine Saline GradientFVLMEMIELTQKEIKALLTFMECRDVEEWSEVLDLPELLTLHSKLTSAQTY*
Ga0136549_1011023963300010389Marine Methane Seep SedimentMEMIALTQKEIGALLTFMECRDVEEWSDVLDLPELLTLHSKLTSAQTY*
Ga0129343_134865413300012967AqueousSLTIQPTVFVPMEMIELTQKEIGALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY*
Ga0181584_1022090143300017949Salt MarshMEMIALTQKEIEALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY
Ga0181584_1026445323300017949Salt MarshMEMIELTQKEIRALLTFMECRDVEEWSEVLDLPELLTLHSKLTNAQTY
Ga0181584_1053097833300017949Salt MarshMEMIALTQKEIRALLTFMECRDVEEWSDILDLPELLTLHSKLTNAQTY
Ga0181584_1086966623300017949Salt MarshMEMIELTQKEIRALLTFMECRDVEEWSEVLDLPELLTLHSKLSSAQTY
Ga0181584_1092332023300017949Salt MarshMEMVELSQKEIRALITFMESRDVEEWSEILDLPELITLHT
Ga0181577_1024709043300017951Salt MarshMEMVELSQKEISALLTFMECRDMEEWAEILDLPELITLHSKLTSAQTY
Ga0181577_1074435823300017951Salt MarshMEMVELSQKEIRALITFIENCDVEKLPAIIELPELITLHAKLRESQTY
Ga0181580_1070419633300017956Salt MarshMEMIALTQKEIRALLTFMECRDVEEWSEVLDLPELLT
Ga0181581_1049584113300017962Salt MarshMEMIALTQKEIEALLTFMEYRDVEEWSDILDLPELLTLHSKLTSAQTY
Ga0181581_1058080613300017962Salt MarshTVFVLMEMIALTQKEIEALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY
Ga0181581_1086081833300017962Salt MarshMEMIALTQKEIRALLTFMECRDVEEWSEVLDLPELLTLHSKL
Ga0181589_1086168923300017964Salt MarshMIELTQKEIGALLTFMECRDVEEWSDILDLPELLTLHSKLTNAQTY
Ga0181590_1008736463300017967Salt MarshMEMVELSQKEIRALITFMESRDVEEWSEILDLPELITLHTKLHESQTY
Ga0181590_1014636773300017967Salt MarshMEMIELSQKEIRALLTFMECRDVEEWSEVLDLPELLTLHSKLTNAQTY
Ga0181587_1013704013300017968Salt MarshLTQKEIEALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY
Ga0181587_1059090743300017968Salt MarshMEMIALTQKEIEALLTFMECRDVEEWSDILDLPELLTLHSKLTSA
Ga0181585_1052595323300017969Salt MarshMEMIALTQKEIRALLTFMECRDVEEWSEVLDLPELLTLHSKLSSAQTY
Ga0181585_1105662333300017969Salt MarshMEMIELTQKEIEALLTFMECRDVEEWSDILDLPELLTLHSKLTS
Ga0181572_1010355473300018049Salt MarshELSQKEIRALLVFMECRDVEEWSEILDLPELITLHSKLSSAQTY
Ga0181592_1085956623300018421Salt MarshMEMIELTQKEIGALLTFMECRDVEEWSEVLDLPELLTLHSKLTNAQTYXYE
Ga0181592_1107243633300018421Salt MarshALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY
Ga0181591_1035201353300018424Salt MarshALTQKEIKALLTFMECRDVEEWSEVLDLPELLTLHEKLSSSQTY
Ga0181591_1036052423300018424Salt MarshMEMIELTQKEIRALLTFMEGRDVEEWSEVLDLPELLTLHS
Ga0181591_1116062413300018424Salt MarshVLMEMIALTQKEIKALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY
Ga0194016_101566713300019708SedimentMEMIALTQKEIRALLTFMECRDVEEWSDVLDLPELLTLHS
Ga0193974_106630713300019726SedimentMEMIALTQKEIKALLTFMECRDVEEWSEVLDLPELLTLHSKLTSAQTY
Ga0194029_100589313300019751FreshwaterMEMIALTQKEIRALLTFMECRDVEEWSEVLDLPELLTLHSKLTSAQTY
Ga0194023_101454663300019756FreshwaterMEMVELSQKEIRALLTFMECRDVEEWSEVLDLPELLTLHSKLTNAQTY
Ga0194023_106917723300019756FreshwaterMEMIELTQKEIRALLTFMECRDVEEWSDVLDLPELLTLHSKLTSAQTY
Ga0194024_100475133300019765FreshwaterMEMIELTQKEIRALLTFMECRDVEEWSEVLDLPELITLHSKLTNAQTY
Ga0194024_102342713300019765FreshwaterMIALTQKEIRALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY
Ga0194024_113534813300019765FreshwaterMEMIALTQKEIRALLTFMECRDVEEWSEVLDLPELLTLHSKLTS
Ga0213867_1001374143300021335SeawaterMEMIELTQKEIGALLTFMECRDVEEWSEVLDLPELLTLHSKLTNAQTY
Ga0213859_1003662473300021364SeawaterMEMIELTQKEIGALLTFMECRDVEEWSEVLDLPELLTLHSKLSSAQTY
Ga0213859_1012481233300021364SeawaterMDPPTIQPTVFVLMEMIELTQKEIGALLTFMECRDVEEWSEVLDLPELLTLHSKLTSAQT
Ga0213866_1033903723300021425SeawaterMEMIELTQKEIRALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY
Ga0213866_1036626423300021425SeawaterMEMIALTQKEIKALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY
Ga0196895_100727243300022067AqueousMEMIALTQKEIRALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY
Ga0196899_100503233300022187AqueousMEMIALTQKEIRALLTFMECRDVEEWSEVLDLPELLILHSKLSSAQTY
Ga0196899_104859753300022187AqueousMIALTQKEIEALLTFMECRDVEEWSEILDLPELLTLHSKLTSAQTY
Ga0196899_113055033300022187AqueousMEMIALTQKEIGALLTFMECHDVEEWFEVLDLPELLTLHSKLTSAQTY
Ga0196905_107607233300022198AqueousMEMIELTQKEIRALLTFMECRDVEEWSEVLDLPELLTLHSKLTSAQTY
Ga0255770_1023744923300022937Salt MarshMEMIELTQKEIEALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY
Ga0255778_1005767793300023084Salt MarshLLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY
Ga0255751_1026267153300023116Salt MarshQKEIEALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY
Ga0255776_1003768113300023173Salt MarshSFAIQPTVFVLMEMIELTQKEIEALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY
Ga0255768_1004698063300023180Salt MarshMIELTQKEIRALLTFMECRDVEEWSDILDLPELLTLHSKLTNAQTY
Ga0208428_103333623300025653AqueousMEMIALTQKEIGALLTFMECRDVEEWSEVLDLPELLTLHSKLTSAQTY
Ga0208162_115751913300025674AqueousMEMIALTQKEIRALLTFMECRDVEEWSEVLDLPELLTL
Ga0208162_120421813300025674AqueousLMEMIELTQKEIKALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY
Ga0208019_101280233300025687AqueousMIELTQKEIGALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY
Ga0208019_111316633300025687AqueousMEMIELTQKEIKALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY
Ga0208019_112315333300025687AqueousMEMIELTQKEIRALLTFMECRDVEEWSDVLNLPELLTL
Ga0208427_127935813300025771AqueousMEMIVLTQKEIKALLTFMECRDVEEWSEVLDLPELLTLHSKLTSAQTY
Ga0208917_120801543300025840AqueousVFSTGDVLMEMVELSQKEIRALITFMESRDVEEWSEILDLPELITLHTKLHESQTY
Ga0208917_120855413300025840AqueousQKEIRALLTFMECRDVEEWSEVLDLPELLTLHSKLSSAQTY
Ga0208645_112134063300025853AqueousVLMEMIALTQKEIRALLTFMECRDVEEWSEVLDLPELLTLHSKLTSAQTY
Ga0208644_103923453300025889AqueousMEMIALTQKEIRALLTFMECHDVEEWFEVLDLPELLTLHSKLTSAQTY
Ga0209536_10221255233300027917Marine SedimentMEMIELTQKEIGALLTFMECRDVEEWSDILDLPELLTLHSKLTSAQTY
Ga0348336_157707_76_2223300034375AqueousMEMIALTQKEIEALLTFMECRDVEEWSEILDLPELLTLHSKLTSAQTY

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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