Metagenome / Metatranscriptome Family F105189

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Overview

Basic Information
Family ID	F105189
Family Type	Metagenome / Metatranscriptome
Number of Sequences	100
Average Sequence Length	49 residues
Representative Sequence	MAGIPKIKITFDADFDELKKGVKGAQNEVEGFGSKVGDFAKKAGAAFALA
Number of Associated Samples	81
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	71.67 %
% of genes near scaffold ends (potentially truncated)	58.00 %
% of genes from short scaffolds (< 2000 bps)	57.00 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Duplodnaviria (55.000 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (46.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (41.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.72% β-sheet: 0.00% Coil/Unstructured: 51.28%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF05065	Phage_capsid	2.00
PF03354	TerL_ATPase	1.00
PF04586	Peptidase_S78	1.00
PF04860	Phage_portal	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	2.00
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	1.00
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	1.00

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.00 %
Unclassified	root	N/A	40.00 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	59.00 %
Unclassified	root	N/A	40.00 %
cellular organisms	root	All Organisms → cellular organisms	1.00 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	55.00 %
Unclassified	root	N/A	40.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.00 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	55.00 %
Unclassified	root	N/A	40.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.00 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	55.00 %
Unclassified	root	N/A	40.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.00 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	55.00 %
Unclassified	root	N/A	40.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.00 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	55.00 %
Unclassified	root	N/A	40.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.00 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	55.00 %
Unclassified	root	N/A	40.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000756\|JGI12421J11937_10076027	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	987	Open in IMG/M
3300004282\|Ga0066599_100172534	All Organisms → Viruses → Predicted Viral	1142	Open in IMG/M
3300005582\|Ga0049080_10239881	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	593	Open in IMG/M
3300006484\|Ga0070744_10002938	All Organisms → cellular organisms → Bacteria	5139	Open in IMG/M
3300006802\|Ga0070749_10467911	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	689	Open in IMG/M
3300006802\|Ga0070749_10798256	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	501	Open in IMG/M
3300006803\|Ga0075467_10536736	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	600	Open in IMG/M
3300006805\|Ga0075464_10643052	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	654	Open in IMG/M
3300007708\|Ga0102859_1054433	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1113	Open in IMG/M
3300008107\|Ga0114340_1214149	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	629	Open in IMG/M
3300008450\|Ga0114880_1242684	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	568	Open in IMG/M
3300009082\|Ga0105099_10432565	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	789	Open in IMG/M
3300009085\|Ga0105103_10234244	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	989	Open in IMG/M
3300009157\|Ga0105092_10887421	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	526	Open in IMG/M
3300009170\|Ga0105096_10768845	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	514	Open in IMG/M
3300009181\|Ga0114969_10306358	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	935	Open in IMG/M
3300009181\|Ga0114969_10771142	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	512	Open in IMG/M
3300010885\|Ga0133913_12292804	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1326	Open in IMG/M
3300012709\|Ga0157608_1015108	All Organisms → Viruses → Predicted Viral	1999	Open in IMG/M
3300017723\|Ga0181362_1005697	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2646	Open in IMG/M
3300017761\|Ga0181356_1207145	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	577	Open in IMG/M
3300021963\|Ga0222712_10015561	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6579	Open in IMG/M
3300024509\|Ga0255175_1045944	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	826	Open in IMG/M
3300025896\|Ga0208916_10188712	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	891	Open in IMG/M
3300026459\|Ga0255170_1062597	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	636	Open in IMG/M
3300027721\|Ga0209492_1279768	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	559	Open in IMG/M
3300027732\|Ga0209442_1061034	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1599	Open in IMG/M
3300027754\|Ga0209596_1155246	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1014	Open in IMG/M
3300027772\|Ga0209768_10418573	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	528	Open in IMG/M
3300027785\|Ga0209246_10275114	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	649	Open in IMG/M
3300027792\|Ga0209287_10383607	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	540	Open in IMG/M
3300027798\|Ga0209353_10261476	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	742	Open in IMG/M
3300027798\|Ga0209353_10369599	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	595	Open in IMG/M
3300027805\|Ga0209229_10194721	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	908	Open in IMG/M
3300027808\|Ga0209354_10116879	All Organisms → Viruses → Predicted Viral	1089	Open in IMG/M
3300027892\|Ga0209550_10677915	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	596	Open in IMG/M
3300027900\|Ga0209253_10782979	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	680	Open in IMG/M
3300027971\|Ga0209401_1118432	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1070	Open in IMG/M
3300028091\|Ga0255184_1103260	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	526	Open in IMG/M
3300031673\|Ga0307377_11065546	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	538	Open in IMG/M
3300031707\|Ga0315291_10940421	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	734	Open in IMG/M
3300031857\|Ga0315909_10962859	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	520	Open in IMG/M
3300031885\|Ga0315285_10951756	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	520	Open in IMG/M
3300031952\|Ga0315294_10971754	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	711	Open in IMG/M
3300031963\|Ga0315901_11208783	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	511	Open in IMG/M
3300031999\|Ga0315274_10575455	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1251	Open in IMG/M
3300031999\|Ga0315274_10775064	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1022	Open in IMG/M
3300032046\|Ga0315289_10868378	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	781	Open in IMG/M
3300032053\|Ga0315284_11984514	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	591	Open in IMG/M
3300032156\|Ga0315295_10610850	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1104	Open in IMG/M
3300032342\|Ga0315286_10899823	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	888	Open in IMG/M
3300032516\|Ga0315273_11740272	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	753	Open in IMG/M
3300033993\|Ga0334994_0552086	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	525	Open in IMG/M
3300034012\|Ga0334986_0104386	All Organisms → Viruses → Predicted Viral	1694	Open in IMG/M
3300034062\|Ga0334995_0710274	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	564	Open in IMG/M
3300034068\|Ga0334990_0576679	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	593	Open in IMG/M
3300034102\|Ga0335029_0779430	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	507	Open in IMG/M
3300034104\|Ga0335031_0788611	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	533	Open in IMG/M
3300034106\|Ga0335036_0395960	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	889	Open in IMG/M
3300034272\|Ga0335049_0801744	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	557	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.00%
Terrestrial	Environmental → Terrestrial	1.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	87.00%
Marine	Environmental → Aquatic → Marine	12.00%
Soil	Environmental → Terrestrial → Soil	1.00%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	44.00%
Lentic	Environmental → Aquatic → Freshwater → Lentic	21.00%
Coastal	Environmental → Aquatic → Marine → Coastal	9.00%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	8.00%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.00%
River	Environmental → Aquatic → Freshwater → River	5.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.00%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.00%
Pond	Environmental → Aquatic → Freshwater → Pond	1.00%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.00%
Clay	Environmental → Terrestrial → Soil → Clay	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	32.00%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	17.00%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	12.00%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	9.00%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	8.00%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.00%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	5.00%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	3.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.00%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.00%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.00%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	1.00%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.00%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	20.00%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	15.00%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	12.00%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	8.00%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	8.00%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	6.00%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	6.00%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	5.00%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	3.00%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	3.00%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.00%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	1.00%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	1.00%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.00%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	1.00%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.00%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.00%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	1.00%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.00%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.00%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.00%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.00%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300007363	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009170	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300012709	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES134 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012970	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300024505	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepA_8h	Environmental	Open in IMG/M
3300024509	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepC_8d	Environmental	Open in IMG/M
3300025635	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300026459	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepA_8d	Environmental	Open in IMG/M
3300026473	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepC_8d	Environmental	Open in IMG/M
3300027563	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027772	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027792	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027971	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028091	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepA_0h	Environmental	Open in IMG/M
3300031673	Soil microbial communities from Risofladan, Vaasa, Finland - TR-3	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033992	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034068	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031	Environmental	Open in IMG/M
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental	Open in IMG/M
3300034120	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172	Environmental	Open in IMG/M
3300034272	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2017-rr0156	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_100760271	3300000756	Freshwater And Sediment	MASIPKVKITFDADFDDLKKGIKGGQAEVESFADKVGDFGKKAAAAFAV
Ga0066599_1001725343	3300004282	Freshwater	MAGIPKVKITFDADFDELKKGVKGAQGQVEGFSDKIGKFGKVAAAAFAAATV
Ga0069718_160897791	3300004481	Sediment	MAIPKVKITFDADLDGLRKGVNGASSEVEGFGGKVAKFGKMAGAAFAA
Ga0049080_102398812	3300005582	Freshwater Lentic	MAGIPKVKITFDADFDELKRGVKGAEQEVQGFGDKM
Ga0070744_100029381	3300006484	Estuarine	MAGIPKVKITFDADFDDLKKGISGAQNEVEGFGSKVSAFGKKAAAGFALAAAAAVAY
Ga0070749_104679111	3300006802	Aqueous	MAGIPKVKITFDADFDELKRGVKGATDEVEGFGTKIGKFGKAAGAAFAVAGAAA
Ga0070749_107982562	3300006802	Aqueous	MAGIPKVKITFDADFDELKRGVKGAEQEVQGFGDK
Ga0075467_105367361	3300006803	Aqueous	MAGIPKVKITFDADFDELKRGVAGAQNEVQSFGDKMGKFGKMAGAAFAVASAAAL
Ga0075464_106430522	3300006805	Aqueous	MAIPKVKITFDADLDGLRKGVNGASNEVQGFGDKDA*
Ga0075458_100202331	3300007363	Aqueous	MAGIPKVKIQFDADLDGLKKGTSDADKEVGGFADRVGEFGKK
Ga0102859_10544333	3300007708	Estuarine	MAGIPKVKITFDADFDDLKKGIKGSQAEVETFADKVGDFGKKAAVAFGIAGVAIGAFALAADKAAAED*
Ga0114340_12141492	3300008107	Freshwater, Plankton	MAGIPKVKITFDADLDELKKGVKSATSEVQSFGDRAADFGKKAALAFAVAGAAVTAF
Ga0114363_10941901	3300008266	Freshwater, Plankton	MAIPKVKITFDADLDGLRKGVNGASNEVEGFGSKVAKFGKMAGAAFAAAGVAAAAY
Ga0114363_10997973	3300008266	Freshwater, Plankton	MAIPKVKISFDADLDGLRKGVNGASDEVEGFGAKVGKFGKMA
Ga0114880_11044713	3300008450	Freshwater Lake	MAGIPKIKITFDADFDQLKAGVKGAQNEVEGFGSKMGGFAKKAG
Ga0114880_12426841	3300008450	Freshwater Lake	MAIPKVKITFDADLDGLRKGVNGASNEVEGFGSKVSKFGKMAGAAFAAAG
Ga0105099_104325651	3300009082	Freshwater Sediment	MAGIPKVKITFDADFDDLKKGISGAQTEVSGFSDKLGKFAK
Ga0105103_102342443	3300009085	Freshwater Sediment	MAGIPKVKITFDADFDELKKGVKGAQNEVEGFSSKIGKFGKVAAAAFAAA
Ga0105092_108874212	3300009157	Freshwater Sediment	MAGIPKIKITFDADFDQLKSGVKGAQNEVEGFGSKLGGFAKKAGKAFAVAGAAAAAYAGVLLVDGV
Ga0105096_107688452	3300009170	Freshwater Sediment	MAGISKIKITFDADFDELKKGVKGAQNEVEGFGSKLGGFAKKAGK
Ga0114969_103063583	3300009181	Freshwater Lake	MAGIPKVKITFDADFDELKRGVTGATNEVQSFGDKMG
Ga0114969_105860072	3300009181	Freshwater Lake	MAGIPKVKIQFDADFDDLKKGVKGATDEIEGFGSRVGDFAKKAGVAFAIAGAAAAAYAG
Ga0114969_107711421	3300009181	Freshwater Lake	MAGIPKVKITFYADFDELKKGIKGGQDEIETFGSKVGDFGKKAGLAFAAAGIAAAAYASKLLIDGVKSAIADE
Ga0129333_109628821	3300010354	Freshwater To Marine Saline Gradient	MAGIPKVKIQFDADLDGLKKGSKDAEDQVEGFAGKVGEF
Ga0133913_122928041	3300010885	Freshwater Lake	MAGIPKVKITFDADFDDLKKGIKGSQAEVETFSDKVGDFGQKAAIAFAAAG
Ga0157210_10363361	3300012665	Freshwater	MAGIPKVKITFDADFDELKRGVKGAEQEVQSFGDKMGKFGKMAGAAFAVA
Ga0157608_10151086	3300012709	Freshwater	MAGIPKIKITFDADFDELKKGVKGAQNEVEGFGSKMGGFAKKAGAAFAV
Ga0129338_13703582	3300012970	Aqueous	MAGIPKVKIQFDADLDGLKKGSKDAEDQVEGFAGKVGEFGKKAAA
Ga0181362_10056977	3300017723	Freshwater Lake	MAGIPKVKITFDADFDELKKGIAGGQKEIESFGSRVSDFGKKAGLAFAVAGAA
Ga0181365_10014909	3300017736	Freshwater Lake	MAGIPKVKITFDADFDELKRGVKGAEAEVQGFGDKV
Ga0181365_10611653	3300017736	Freshwater Lake	MAGIPKVKITFDADFDDLKKGIKGGQAEVEGFSSKVGE
Ga0181356_12071452	3300017761	Freshwater Lake	MAGIPKVKITFDADFDELKKGIAGGQKEIESFGSRVSDFGKKAGLAFAVAGAAAAAYAGKLLIDGV
Ga0181357_11168053	3300017777	Freshwater Lake	MAGIPKVKITFDADFDDLKKGIRGGQAEVETFASKVGDFGKKAAV
Ga0181355_11985961	3300017785	Freshwater Lake	MAGIPKVKIQFDADLDGLKKGSKDAEDQVEGFAGKVGEFGKKAAAA
Ga0211734_102158702	3300020159	Freshwater	MAGIPKIKITFDADFDELRRGVKGATDEVEGFGDRAKKFGKVAGLAFAAAGAAAVA
Ga0222712_100155611	3300021963	Estuarine Water	MAGIPKVKIQFDADFSDLQKGLKSTEGEIEGFGSKVGDFGKKAGVAFGVAAVAAAAYATTLLIDGVQS
Ga0255150_10161451	3300024505	Freshwater	MAGIPKVKITFDADFDELKRGVKGAENEVTSFGDRM
Ga0255175_10459443	3300024509	Freshwater	MAGIPKVKITFDADFDELKRGITGATNEVEGFGSKMGKFGKIAGAAFAAAGAAALAYAGVLLKQGVES
Ga0208147_10148441	3300025635	Aqueous	MAGIPKVKIQFDADLDGLKKGTSDADKEVGGFADRVGEFGKKA
Ga0208916_101887121	3300025896	Aqueous	MAGIPKVKITFDADFDELKRGVAGAQNEVQNFGDKMGKFGKMAGAAFAVASAAALAYAGVLLKQGV
Ga0255170_10625972	3300026459	Freshwater	MAGIPKVKITFDADFDELKRGITGATNEVEGFGSK
Ga0255166_10290183	3300026473	Freshwater	MAGIPKVKITFDADFDELKRGVKGAENEVTSFGDRMSKFGKIAGAAFAAAGAAAIAYGAVLLKQ
Ga0209552_10358484	3300027563	Freshwater Lake	MAGIPKVKITFDADFDDLKKGIKGGQAEVEGFGAK
Ga0209492_12797681	3300027721	Freshwater Sediment	MAGIPKIKISFDADFDELKKGVKGAQNEVQGFGSKMGDFAKKAGKAFAVAGAAAAAYAGVLLVDGVKSAIEDE
Ga0209442_10610344	3300027732	Freshwater Lake	MAGIPKVKITFDADFDELKRGVKGAEAEVQGFGDKVGKFGKMAGAAFAVAGAAALAYGAVLLKQGVESAIA
Ga0209596_11552463	3300027754	Freshwater Lake	MAGIPKVKITFDADFDELKRGVAGAENEVQSFGDKMGKFGKMAGAAFA
Ga0209768_104185732	3300027772	Freshwater Lake	MAGIPKVKITFDADFDELKRGVKGAEAEVQGFGDKVGKFGKMAGA
Ga0209246_102751142	3300027785	Freshwater Lake	MAGIPKVKITFDADFDELKKGIKGGQNEIESFGSKVGDFGKKAGLAFA
Ga0209287_103836072	3300027792	Freshwater Sediment	MAGIPKVKITFDADFDELKRGVKGAQTEVEGFSDKIGKFGKV
Ga0209353_102614762	3300027798	Freshwater Lake	MAGIPKVKITFDADFDDLKKGIRGGQAEVETFASKVGDFGKKA
Ga0209353_103695991	3300027798	Freshwater Lake	MAGIPKVKITFDADFDDLKKGIKGGQGEIESFSDKVTDFGKKAGLA
Ga0209353_104460821	3300027798	Freshwater Lake	MAGIPKVKITFDADFDDLKKGIKGSQAEVETFADKVGDFGKKAAIAFGIAG
Ga0209229_101947213	3300027805	Freshwater And Sediment	MAGIPKIKITFDADFDELKKGVKGAQNEVEGFGSKMGDFAK
Ga0209354_101168793	3300027808	Freshwater Lake	MAGIPKIKITFDADFDELKKGVKGAQNEVQGFGSKVG
Ga0209550_106779152	3300027892	Freshwater Lake	MAGIPKIKITFDADFDELKKGVKGAQNEVEGFGSKVGDFAKKAGAAFALA
Ga0209253_104916243	3300027900	Freshwater Lake Sediment	MAGIPKIKITFDADFDELKKGVKGAQNEVEGFGSK
Ga0209253_107829792	3300027900	Freshwater Lake Sediment	MAGIPKIKITFDADFDELKKGVKGAQNEVEGFGSKVGDFA
Ga0209253_108863911	3300027900	Freshwater Lake Sediment	MAIPKVKITFDADLDGLRKGVNGASSEVEGFGGKVAKFGKMA
Ga0209401_11184321	3300027971	Freshwater Lake	MAGIPKVKITFDADFDELKRGVKGAEQEVQGFGDKMGKFGKMAGAAFAIAGAAALAYAGVLLKQGVE
Ga0255184_11032601	3300028091	Freshwater	MAGIPKVKITFDADFDELKRGVKGAENEVTSFGDRMSKFGKIAGAAFAAAGAAAIAYGAVLL
Ga0307377_110655462	3300031673	Soil	MAGIPKVRVQFDADFDQLKKGVKGATNEVESFGSKVGDFSKKAGQAFALVGA
Ga0315291_109404212	3300031707	Sediment	MAGIPKVKITFDADFDDLKKGIKGGQDEVEGFSSKVGEFGKKAAA
Ga0315900_106856291	3300031787	Freshwater	MAIPKVKITFDADLDGLRKGVNGASNEVQGFGDRVAKFGKMAGAAFAAAGV
Ga0315909_103507853	3300031857	Freshwater	MAGIPKVKIQFDADLDGLKKGTASADKEVAGFADKVGEFGKKAAAAFAVAAAA
Ga0315909_109628591	3300031857	Freshwater	MAGIPKIKITFDADFDQLKAGVKGAQNEVEGFGSKMGGFAKKAGAAFA
Ga0315285_109517562	3300031885	Sediment	MAGIPKVKITFDADFDELKKGIKGGQNEIESFGSKVGDFGKKAGLAFAAAGIAAAAYASKLLIDGVKSAIADE
Ga0315904_107088821	3300031951	Freshwater	MAIPKVKITFDADLDGLKKGTKGAEDELTGFSGKVAEFGKKAAAAFA
Ga0315294_109717542	3300031952	Sediment	MAGIPKVKITFDADFDDLKKGIKGGQAEVESFADKVGDFGKKAAAAFAVA
Ga0315901_101085566	3300031963	Freshwater	MAGIPKVKIQFDADLDGLKKGSKDAEDQVDGFAGKVSEFGKKAAAAFAVAAAAKPST
Ga0315901_112087832	3300031963	Freshwater	MAIPKVKITFDADLDGLRRGVNGASNEVQGFGDRV
Ga0315274_105754554	3300031999	Sediment	MAGIPKVKITFDADFDDLKKGIKGGQDEIEGFGSKVGEFGKKAAVAFAVA
Ga0315274_107750643	3300031999	Sediment	MAGIPKVKITFDADFDDLKKGIKGGQGEIESFSDKVTEFGKKA
Ga0315289_104835451	3300032046	Sediment	MAGIPKVRVQFDADFDELKKGVRGATNEVEGFGSKVGDFAKKAGAAFAIAGVAAAVYAGKLL
Ga0315289_108683783	3300032046	Sediment	MAGIPKVKITFDADFDELKKGVKGATDEVEGFGGKIADFGKKAAVA
Ga0315906_108423812	3300032050	Freshwater	MAGIPKVKIQFDADLDGLKKGTASADKEVAGFADKVGEFGK
Ga0315284_119845142	3300032053	Sediment	MAGIPKVKITFDADFDDLKKGISGAQNEVEGFGSK
Ga0315903_100638597	3300032116	Freshwater	MAGIPKVKITFDADFDELKRGVKGATDEVEGFGSKVGKFGKAAG
Ga0315277_116581671	3300032118	Sediment	MAGIPKVKITFDADFDELKKGIKGGQNEIESFGSKVGDFGKKAGLAFAAAGIAAAAYASKLL
Ga0315295_106108503	3300032156	Sediment	MAGIPKVKITFDADFDDLKKGIKGGQDEVEGFSSKVGEFGKKAAAAFALAAA
Ga0315286_108998233	3300032342	Sediment	MAGIPKVKITFDADFDDLKKGIKGGQDEIEGFGSKVGEF
Ga0315273_117402721	3300032516	Sediment	MAGIPKVKITFDADFDDLKKGIKGGQAEVESFADKVGDFGKKAAAAFAVAAVAA
Ga0334992_0429256_2_172	3300033992	Freshwater	MAGIPKVKITFDADFDDLKKGIKGSQAEVETFADKVGDFGKKAAVAFGIAGAAIGAF
Ga0334994_0552086_401_523	3300033993	Freshwater	MAGIPKVKITFDADFDELKKGVKGAQKEVEGFSDKIGKFGK
Ga0334986_0104386_1523_1693	3300034012	Freshwater	MAGIPKVKITFDADFDELKKGVKGAQNEVEGFSDRIGKFGKVAAAAFAAATVAAVAY
Ga0334987_0133382_1_165	3300034061	Freshwater	MAGIPKVKITFDADLDGLRKGVNGASTEVSGFGDKVKKFGKMAAAAFAAAGVAAL
Ga0334987_0659366_1_153	3300034061	Freshwater	MAGIPKVKITFDADFDDLKKGIKGSQAEIETFSDKVGDFGKKAAVAFGVAA
Ga0334995_0279220_2_106	3300034062	Freshwater	MAIPKVKITFDADLDGLRRGVNGASNEVSGFGDKV
Ga0334995_0710274_1_159	3300034062	Freshwater	MAGIPKIKITFDADFDELKKGVKGAQNEVEGFGSKVGDFAKKAGAAFALAGAA
Ga0334990_0576679_3_155	3300034068	Freshwater	MAGIPKIKITFDADFDELKKGVKGAQNEVEGFGSKVGDFAKKAGAAFALAG
Ga0335010_0235781_1_162	3300034092	Freshwater	MAGIPKVKITFDADFDELKKGVKGAQNEVEGFSSKIGKFGKVAAAAFAAATVAA
Ga0335010_0659241_355_519	3300034092	Freshwater	MAGIPKVKITFDADFDDLKKGIKGSQAEVETFADKVGDFGKKAAVAFGIAGAAIG
Ga0335029_0269941_1_162	3300034102	Freshwater	MAGIPKVKIQFDADLDGLKKGTQDADQEIGGFAGKVEEFGKRAAAAFALAAAAA
Ga0335029_0779430_2_136	3300034102	Freshwater	MAGIPKVKITFDADLDELKKGVKSATGEVQSFSDRAADFGKKAAL
Ga0335031_0038762_2_115	3300034104	Freshwater	MAGIPKVKITFDADFDELKKGVKGAQNEVEGFSSKIGK
Ga0335031_0788611_388_531	3300034104	Freshwater	MAGIPKVKITFDADFDELRKGVKGAEKEVEGFGSKVADFGKKMAAAFA
Ga0335036_0395960_683_889	3300034106	Freshwater	MAIPKVKITFDADLDGLRRGVNGASNEVQGFGDRVAKFGKMAGAAFAAAGVAATAYAGKLLVDGVKSAI
Ga0335053_0117092_1684_1827	3300034118	Freshwater	MAGIPKVKITFDADFDELKRGVKGAENEVKGFGDKMGKFGKIAGTAFA
Ga0335056_0046113_2_163	3300034120	Freshwater	MAIPKVKITFDADLDGLRKGVNGASNEVQGFGDRVAKFGKMAGAAFAAAGVAAA
Ga0335049_0801744_3_170	3300034272	Freshwater	MAGIPKVKITFDADFDELKRGVKGATDEVEGFGSKVGKFGKAAGAAFAVAGAAALA
Ga0335013_0603199_507_641	3300034284	Freshwater	MAIPKVKITFDADLDGLRKGTKGASDEVEGFGAKLGKFGKIAGAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F105189

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences