NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F105200

Metagenome / Metatranscriptome Family F105200

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105200
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 108 residues
Representative Sequence VPDSFDRKLEQLLEYTEAPQPEAFTMDVMRGVRREQRTRKIILWAFGLVGALFGLSGALMLTGPVSELFTFSLAMPAMQTMQATLFIVGAAAFYLWFMNDDFSLGG
Number of Associated Samples 63
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 56
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands
(17.000 % of family members)
Environment Ontology (ENVO) Unclassified
(33.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(31.000 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 57.46%    β-sheet: 0.00%    Coil/Unstructured: 42.54%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF08281Sigma70_r4_2 55.00
PF00144Beta-lactamase 17.00
PF13502AsmA_2 2.00
PF13432TPR_16 2.00
PF14559TPR_19 2.00
PF01863YgjP-like 2.00
PF00753Lactamase_B 2.00
PF05170AsmA 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 17.00
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 17.00
COG2367Beta-lactamase class ADefense mechanisms [V] 17.00
COG1451UTP pyrophosphatase, metal-dependent hydrolase familyGeneral function prediction only [R] 2.00
COG2982Uncharacterized conserved protein AsmA involved in outer membrane biogenesisCell wall/membrane/envelope biogenesis [M] 1.00

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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands17.00%
SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Sediment11.00%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine10.00%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment10.00%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater9.00%
Mangrove SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment7.00%
Worm BurrowEnvironmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow6.00%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine4.00%
MarineEnvironmental → Aquatic → Marine → Oil Seeps → Unclassified → Marine4.00%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands4.00%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine3.00%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment2.00%
MarineEnvironmental → Aquatic → Marine → Wetlands → Sediment → Marine2.00%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment2.00%
SedimentEnvironmental → Aquatic → Marine → Subtidal Zone → Sediment → Sediment2.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.00%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.00%
Hydrothermal Vent Microbial MatEnvironmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Hydrothermal Vent Microbial Mat1.00%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)1.00%
SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sand1.00%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.00%

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000124Marine microbial communities from chronically polluted sediments in the Baltic Sea - site KBA sample SWE 12_21mEnvironmentalOpen in IMG/M
3300000134Marine microbial communities from chronically polluted sediments in the Baltic Sea - site KBA sample SWE 07_21mEnvironmentalOpen in IMG/M
3300004001Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWC_D1EnvironmentalOpen in IMG/M
3300004003Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWA_D1EnvironmentalOpen in IMG/M
3300004028Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordC_D2EnvironmentalOpen in IMG/M
3300004030Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordA_D2EnvironmentalOpen in IMG/M
3300004056Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWB_D1EnvironmentalOpen in IMG/M
3300004074Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300004113Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_12 (version 2)EnvironmentalOpen in IMG/M
3300004147Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_CordA_D2EnvironmentalOpen in IMG/M
3300004150Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqC_D1EnvironmentalOpen in IMG/M
3300005588Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.1EnvironmentalOpen in IMG/M
3300005590Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2EnvironmentalOpen in IMG/M
3300005612Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2EnvironmentalOpen in IMG/M
3300005828Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.182_BBIEnvironmentalOpen in IMG/M
3300005992Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_14-Oct-14EnvironmentalOpen in IMG/M
3300006467Coastal sediment microbial communities from Rhode Island, USA: Combined Assembly of Gp0121717, Gp0123912, Gp0123935EnvironmentalOpen in IMG/M
3300009033Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_D2_MGEnvironmentalOpen in IMG/M
3300009138Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_D2_MGEnvironmentalOpen in IMG/M
3300009509Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11EnvironmentalOpen in IMG/M
3300010392Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385EnvironmentalOpen in IMG/M
3300010412Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10EnvironmentalOpen in IMG/M
3300010430Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samplesEnvironmentalOpen in IMG/M
3300013101Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay4, Core 4569-4, 0-3 cmEnvironmentalOpen in IMG/M
3300014297Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLC_D1EnvironmentalOpen in IMG/M
3300014305Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D1EnvironmentalOpen in IMG/M
3300014312Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D1EnvironmentalOpen in IMG/M
3300014316Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D1EnvironmentalOpen in IMG/M
3300019699Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FRC_1-2_MGEnvironmentalOpen in IMG/M
3300019732Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_0-1_MGEnvironmentalOpen in IMG/M
3300021337Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.425 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021346Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.374 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021514Hydrothermal vent microbial mat bacterial communities from Southern Trench, Guaymas Basin, Mexico - 4869-30-0-1_MGEnvironmentalOpen in IMG/M
3300022384Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024059 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_2EnvironmentalOpen in IMG/M
3300024062 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_1EnvironmentalOpen in IMG/M
3300024528 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_23EnvironmentalOpen in IMG/M
3300024529 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_21EnvironmentalOpen in IMG/M
3300025599Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025895Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_12 (SPAdes)EnvironmentalOpen in IMG/M
3300025970Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqA_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026024Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqC_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027820Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2 (SPAdes)EnvironmentalOpen in IMG/M
3300027834Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Santa Barbara Oil Seep Sample 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027837 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_3EnvironmentalOpen in IMG/M
3300027845Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2 (SPAdes)EnvironmentalOpen in IMG/M
3300027852Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 7 (SPAdes)EnvironmentalOpen in IMG/M
3300027858Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 2 (SPAdes)EnvironmentalOpen in IMG/M
3300027996 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_6_MGEnvironmentalOpen in IMG/M
3300028598Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160420 (Illumina Assembly)EnvironmentalOpen in IMG/M
3300028600Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160317 (Illumina Assembly)EnvironmentalOpen in IMG/M
3300031728Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrCHost-AssociatedOpen in IMG/M
3300032136Coastal sediment microbial communities from Delaware Bay, Delaware, United States - CS-6 worm burrowEnvironmentalOpen in IMG/M
3300032231Coastal sediment microbial communities from Maine, United States - Cross River worm burrow 1EnvironmentalOpen in IMG/M
3300032251Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A anoxicEnvironmentalOpen in IMG/M
3300032252Coastal sediment microbial communities from Maine, United States - Eddy sediment 2 cmEnvironmentalOpen in IMG/M
3300032258Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2 cmEnvironmentalOpen in IMG/M
3300032259Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2EnvironmentalOpen in IMG/M
3300032262Coastal sediment microbial communities from Maine, United States - Cross River sediment 1EnvironmentalOpen in IMG/M
3300032263Coastal sediment microbial communities from Maine, United States - Phippsburg sediment 1EnvironmentalOpen in IMG/M
3300032273Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A oxicEnvironmentalOpen in IMG/M
3300033429Coastal sediment microbial communities from Maine, United States - Merrow Island sediment 2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
BS_KBA_SWE12_21mDRAFT_1000290753300000124MarineVPDTFDRELEQLLQYSETPQPEAFVMDVMRGVRREQRTRKIILWAFGLIGALFGLSGALMLAGPVSGLFTFSLALPAMETMQVTLFIVGAAAFYLWFMNDDFSLGN*
BS_KBA_SWE07_21mDRAFT_102191423300000134MarineVPDTFDRELEQLLQYSETPQPEAFVMDVMRGVRREQRTRKIILWAFGLIGALFGLSGAXMLXGPVSGLFTFSLALPAMETMQVTLFIVGAAAFYLWFMNDDFSLGN*
Ga0055450_1006364323300004001Natural And Restored WetlandsVPDSFDRKLEQLLKYSEAPQPEVFTMDVMRSVQRERRTRRIILWAFGLVGALFGLSGAFMLTGPVSELLTVSLQMPVMKTMQVTLFIVGAAAFYLWFMNDDFSLGG*
Ga0055445_1002808343300004003Natural And Restored WetlandsVPDSFDRKLEQLLKYSEAPQPEVFTMDVMRSVQRERRTRRIILWAFGLVGALFGLSGAFMLTGPVSELLTVSLQMPVMKTMQVTLFIVGAAAFYLWFMNDDFSL
Ga0055445_1023504723300004003Natural And Restored WetlandsVPDSLDRKLERLLEYSEYPQPEAFAMDVMRGIRSEQRTRKIILWAFGLVGALFGLSGALMLTGPVSGLLRFDLAMPATETMQATLFIVGAAAFYLWFMNDDFSLGG*
Ga0055447_1021415113300004028Natural And Restored WetlandsRLNPTFNGANRSCNDGWKTMIITFPKTMADPVAGRHRRRNVPDSFDRKLEQLLQYKEAPQPEAFTMDVMRGVRRGQRTRKIILWAFGLVGALFGLSGASMLAGPVSELFSFSLAMPAMQTMQATLFIVGAAAFYLWFMNDDFSLGD*
Ga0055444_1004248913300004030Natural And Restored WetlandsMIITFPRNNMKPVQDRHRRRNVPDSFERKLEQLLEYSEAPQAEAFTINVMRSIRREQRRRKIILWSFGLVGALFGLSGALMLTGPVSELLTFSLEMPVMKTMQVTLFVVGATAFYLWFMNDDFSLGS*
Ga0055444_1005124523300004030Natural And Restored WetlandsVPDSFDRKLEQLLEYTAAPQPEAFTLDVMRAVRREQRTRKIILWSFGLVGALFGLSGALMLTGPVNELLTFSLAMPAMQTMQATLFMVGAGAFYLWFMNDDFSLGG*
Ga0055444_1008191323300004030Natural And Restored WetlandsVPDSFDRKLEQLLEYTDAPQPEAFTMEVMSGVRREQRTRKIILWAFGLVGALFGLSGALMLTGPVSELFTFSLAMPAMQTMQATLFIVGAAAFYLWFMNDDFSLGD*
Ga0055478_1006745113300004056Natural And Restored WetlandsPVQDRHRRRNVPDSFERKLEQLLEYSEAPQAEAFTINVMRSIRREQRRRKIILWSFGLVGALFGLSGALMLTGPVSELLTFSLEMPVMKTMQVTLFVVGATAFYLWFMNDDFSLGS*
Ga0055518_1002026123300004074Natural And Restored WetlandsMKPVQGRHRRRNVPDSFERKLGQLLEYSDAPHAEAFTMNVMRSVRREQRRRKIILWSFGLVGALFGLSGALMLTGPVSELLTVSLQMPVMKTMQVTLFVVGATAFYLWFMNDDFSLGS*
Ga0055584_10014641643300004097Pelagic MarineVPDSPFDRELEALLEYTEPPQAEAFTMNVMRSVKREQRTRRLILWAFGLVGALFGLVGAFMLSGSIARLFTFTITMPATETMQVVLFIVAAAAFYTWFMNDDLPLNQ*
Ga0065183_1015296223300004113Pelagic MarineVPDSPFDQELEQLLAYPEEPQNQAFVAEVMQSVKREQHSRKVILWVFGLVGALFGLAGAIMLSDSITRLFTFSLSLPIMETMQAVLVIVAVAAFYTWFMNDDLSLGN*
Ga0065183_1047833113300004113Pelagic MarineVADSTFDRELEQLLGYPDSSQADAFVSNVMQRVKRERLRRRLILWTFGLVGALFGLAGAVMLSDSITRLFTFTLTLPVQETMQAVLFIVAAMAFYIWFMNDDLPLDH*
Ga0055515_1004359223300004147Natural And Restored WetlandsVPDSFDHELEQLLAYTGAPQPEAFVLDVMRSVKREQRIRKLILWVFGLVGAVFGLAGAVMLSGSISRLFTFTVDLPATETMQATLLIVGAAAFYLWFMNDDFSLDN*
Ga0055520_1008069423300004150Natural And Restored WetlandsSCNDGWKTMIITFPKTMADPVAGRHRRRNVPDSFDRKLEQLLQYKEAPQPEAFTMDVMRGVRRGQRTRKIILWAFGLVGALFGLSGASMLAGPVSELFSFSLAMPAMQTMQATLFIVGAAAFYLWFMNDDFSLGD*
Ga0055520_1018870513300004150Natural And Restored WetlandsNGWKTMIITFPRNNMKPVQGRHRRRNVPDSFERKLGQLLEYSDAPHAEAFTMNVMRSVRREQRRRKIILWSFGLVGALFGLSGALMLTGPVSELLTVSLQMPVIKTMQVTLFVVGATAFYLWFMNDDFSLGS*
Ga0070728_1049004013300005588Marine SedimentVPDSSFERELEALLEYTEPPQPEAFTMNVMRSVKREQRTRRLILWAFGLVGALFGLAGAVMLSGSIARLLTFTIKMPATETMQVALFIVAAAAFYTWFMNDDLPLNQ*
Ga0070727_1002082413300005590Marine SedimentVPEHGQELELERLLEYSDAPESGEFVVSVMNSVKREQRSRTLILWVFGLLGALFGLAGAVMLSDSIARLFSFTVYMPATETTQMVLFIVAAVAFYSWVMNDDLAVGG*
Ga0070723_1014404123300005612Marine SedimentVPDSSFDRELEALLEYSASPQPEAFTMDVMRGVKREQFTRKLILWAFGLVGALFGLAGAVMLSGSITRLLTFTVTMPATETMQVVLFIVATAAFYIWFMNDDLPLDN*
Ga0074475_1058607523300005828Sediment (Intertidal)VPDSFDRKLEQLLEYAEAPQPEAFTMDVMRGVRREQRTRKIILWAFGLVGALFGLSGALMLTGPVSELFTFSLAMPAMQTMQATLFIVGAAAFYLWFMNDDFSLGG*
Ga0073924_105200613300005992SandVPDPLDRELENLLQYTEAPQAGVFVTEMMRRVRREQRTRKVILWAFGAVGALFGLAGAVMLTGPVTKLLTVSLAIPGMEAMQASLLIVGVAAFYRWFMNDDLSLGG*
Ga0099972_1103564143300006467MarineVPDSSFDRELEALLGYSDSPQPEAFTMDVMRGVKREQLTRKLILWAFGLVGALFGLVGAVMLSDSITRLFTFTVAMPAMETMQVVLFIAAAAAFYIWFMND
Ga0099972_1340205223300006467MarineVPDSTFDRELEALLEYTEPPQPEAFTMNVMRSVKREQRTRRLILWAFGLVGALFGLAGAVMLSGSIAHLFTFTITMPATETMQVVLFIVAAAAFYTWFMNDDLPLNQ*
Ga0102956_102016823300009033SoilVPDSFDHELERLLAYTGAPKPEAFVLDVMRSVKREQRFRKLILWVFGLVGAVFGLAGAVMLSGSISRLFTFTVDLPATETMQATLFIVGAAAFYLWFMNDDFSLDN*
Ga0102959_104972323300009138SoilIPFPKKNPGPAPGRHRGPKVPDSFDHELERLLAYTGAPKPEAFVLDVMRSVKREQRFRKLILGVFGLVGAVFGLAGAVMLSGSISRLFTFTVDLPATETMQATLFIVGAAAFYLWFMNDDFSLDS*
Ga0123573_1002980943300009509Mangrove SedimentVTDSFDRELEKLLEYGEAPQTEAFVIDVMRHLRRERRVRRAVLWSFGGVGALFGLAGAAMLSGPLGRLFAFSLNLPATETMQVSLVIVAAAAFYLWFMNDDFSLGN*
Ga0123573_1010095833300009509Mangrove SedimentVPDSFDRELEQLLEYTKDKQPELFVMNVMRGVRREQRTRKVILWVCGLVGALFGLTGAVMLSGPISHLFTFNLDLPVTQIMQAVLFTVGAAAFYLWFMNDDFSLGG*
Ga0123573_1084085923300009509Mangrove SedimentTEAFVIDVMRHITRERRVRKAVLWSFGGVGALFGLAGAAMLSGPLGRLFAFSLNLPAIETMQVSLVIVAVAAFYLWFMNDDFSLGN*
Ga0123573_1098354523300009509Mangrove SedimentVPDSFDRKLEQLLQYAAAPQPEAFTMGVMRGVRREQRTRKIILWCFGLVGALFGVSGALMLSGPVSSLLSLNLVMPAMQTMQATLFAVGAGAFYLWFMNDDFSLGG*
Ga0118731_10141183813300010392MarineVPDSFDHELEQLLGYTQAPKPEAFVLDVMRSVKREQRTRKVILWFFGLVGALFGLAGAVMLSDSITRLFSFTVTMPAMQTMQMVLAIVA
Ga0118731_10307111013300010392MarineRELEALLEYTEPPQPEAFTMNVMRSVKREQRTRRLILWAFGLVGALFGLAGAVMLSGSIARLFTFTVAMPVTETMQVVLFIVAAAAFYIWFMNDDLPLDN*
Ga0118731_10355114223300010392MarineVPDSSFDRELEALLEYSESPQPGAFVMDVMRGVRRERRTRRLILWAFGLVGALFGLAGAVMLSGSIERLFTFTLNMPAMETMQATLFIVGAAAFYLWFMNDDFSLGN*
Ga0118731_10423811223300010392MarineVPDSSFDQELGQLLEYSRAPQADAFVVDVMRNVKREQRIRRVILWSFGLVGALFGLMGAVMLSDSITRLFSFTLSLPATETMQVVLFVVGAAAFYTWFMNDDLHVSN*
Ga0118731_10493256323300010392MarineVPDSSFDRELEALLEYSDSPQPEAFTMDVMRGVKREQFTRKLILWAFGLVGALFGLAGAVMLSGSITRLLTFTVTMPATETMQVVLFIVATAAFYIWFMNDDLPLDN*
Ga0118731_10908036723300010392MarineVPDSSIDQQLEQLLEYQEEPQATAFVADVMAGIKREQRTRRLILWAFGLVGALFGLAGAVMLSDSITRLFTFSVTMPATETMQVVLFIVGAAAFYTWFMNDDLSLGS*
Ga0118731_10962522433300010392MarineVPDSSFERELEALLEYTEPPQPEAFTMNVMRGVKREQRTRKLILWAFGLVGALFGLAGAVMLSGSIARLFTFTINMPATETMQVVLFIVAAAAFYTWFMNDDLPLNQ*
Ga0118731_10971771113300010392MarineLLEYTEPPQPEAFTMNVMRSVKREQRTRRLILWAFGLVGALFGLAGAVMLSGSIAHLFTFTITMPATETMQVVLFIVAAAAFYTWFMNDDLPLNQ*
Ga0136852_1001164583300010412Mangrove SedimentVPDSFDRKLEQLLQYAEAPQPEAFTMGVMRGVRREQRTRKIILWCFGLVGALFGVSGALMLSGPVSSLLSLNLVMPAMQTMQATLFAVGAGAFYLWFMNDDFSLGG*
Ga0136852_1066814823300010412Mangrove SedimentVTDPFDRELEKLLEYGDAPQTEAFVIDVMRHITRERRVRKAVLWSFGGVGALFGLAGAAMLSGPLGRLFAFSLNLPAIETMQVSLVIVAVAAFYLWFMNDDFSLGN*
Ga0136852_1147296323300010412Mangrove SedimentMPDAFDRELEQLLKYSDPAKAESFVMDVMRGVRRERFTRNAILWVFGLIGALFGLAGAVMLAGPLGSLLTFSLELPAMETMQISLALVGAAAFYLWFMNDDFSLGR*
Ga0118733_10057814943300010430Marine SedimentVPDSSFERELEQLLEYPEPSQSEAFVLNVMRGVRREQRTRRLILWSFGLVGAMFGLAGAVMLSDSITRLFSFTVTLPAAETMQAVLFIVAAVAFYIWFMNDDLPLETQL*
Ga0118733_10132962123300010430Marine SedimentVPDSFDHELEQLLGYTQAPKPEAFVLDVMRSVKREQRTRKVILWFFGLVGALFGLAGAVMLSDSITRLFSFTVTMPAMQTMQMVLAIVAAAAFYTWFMNDDLSLDN*
Ga0118733_10156796423300010430Marine SedimentVPDSPFDRELEALLEYTEPPQAEAFTMNVMRSVKREQRTRRLILWAFGLVGALFGLAGAVMLSGSIAHLFTFTITMPATETMQVVLFIVAAAAFYTWFMNDDLPLNQ*
Ga0118733_10159942423300010430Marine SedimentVPDSTFDRELEALLEYTEPPQPEAFTMNVMRSVKREQRTRRLILWAFGLVGALFGLAGAVMLSGSIARLFTFTVAMPVTETMQVVLFIVAAAAFYIWFMNDDLPLDN*
Ga0118733_10856047823300010430Marine SedimentIIQFPTVKLKPAQRRQWRRIVPDSSFERELEQLLEYTEPPQSEAFVLKVMRSVRREQRTRRLILWAFGLVGAMFGLAGAVMLSDSITRLFSFTVTLPAAETMQAVLFIVAAVAFYIWFMNDDLPLEH*
Ga0164313_1003653323300013101Marine SedimentVPDSSFDRKLENLLEYSESPQPETFTMDVMRRVQRERRTRKLILWAFGLVGALFGLAGAIMLSGSITRLFAFTVTMPVTETMQVVLFIVAAAAFYTWFMNDDLPLDS*
Ga0164313_1155104123300013101Marine SedimentVPDPSFDQKLETLLEYSESPQPEAFTMDVMRRVKREQRTRKMILWVFGLIGALFGLVGAVMLSGSTTRLFTFTVIIPATETMQVVLFIVAAAAFYIWFMNDDL
Ga0075306_111758013300014297Natural And Restored WetlandsNAANRSCNNGWKTMIITFPGNNMKPVQDRHRRRNVPDSFDRELEHLLKYSEAPQPEVFTMDVMRNVGREQRTRKIILWAFGLIGALFGLSGALMLTGPVSELLSFSLAMPVMKTMQATLLVACATAFYLWFMNDDFSLAS*
Ga0075349_118562413300014305Natural And Restored WetlandsVPDSFDRKLEQLLEYAEAPQSGAFTMNVMRGVRREQRKRKIILWAFGLVGALFVLSGALMLTGPVSELFTFSLAMPAMQTMQETLFIVGAAA
Ga0075345_102673923300014312Natural And Restored WetlandsVPDSFDRKLEQLLEYSEAPQAEAFTMDVMRSVHREQRTRKIILWVFGLVGALFGLSGALMLTGPVGELLTFNLAMPVMKTMQVTLFIVGATAFYLWFMNDDFSLAS*
Ga0075339_113914423300014316Natural And Restored WetlandsVPDSFDRKLEQLLEYTNAPQPEAFTMEVMSGVRREQRTRKIILWAFGLVGALFGLSGALMLTGPVSELFTFSLAMPAMQTMQATLFMVGAGAFYLWFMNDDFSLGG*
Ga0193985_103573013300019699SedimentMIIPFPKKNPGPAPGRHRGPKVPDSFDHELERLLAYTGAPKPEAFVLDVMRSVKREQRFRKLILWVFGLVGAVFGLAGAVMLSGSISRLFTFTVDLPATETMQATLFIVGAAAFYLWFMNDDFSLDN
Ga0194014_101643513300019732SedimentVPDSFDHELERLLAYTGAPQPEAFVLDVMRSVKREQRFRKLILWVFGLVGAVFGLAGAVMLSGSISRLFTFTVDLPATETMQATLFIVGAAAFYLWFMNDDFSLDN
Ga0210341_151127023300021337EstuarineIITFPKKITAPAQDRHRRRKVPDSFDRKLEQLLEYTEAPQPEAFTMGVMRGVRREQRTRKIILWAFGLVGALFGLSGALMLTGPVSELFTFSLAMPAMQTMQATLFIVGAAAFYLWFMNDDFSLGG
Ga0210335_168205033300021346EstuarineVPDSFDRKLEQLLEYTEAPQPEAFTMDVMRGVRREQRTRKIILWAFGLVGALFGLSGALMLTGPVSELFTFSLAMPAMQTMQATLFIVGAAAFYLWFMNDDFSLGG
Ga0190293_118097923300021514Hydrothermal Vent Microbial MatVPDSSFDRKLENLLEYSESPQPEAFTMDVMHSVQRERRTRKLILWAFGLVGALFGLAGVVMLSGSITRLFTFTVTIPATETMQVVLFIVAAAAFYTWFMNDDLPLDS
Ga0210321_100591933300022384EstuarineVPDSFDRKLEQLLEYAEAPQPEAFTMDVMRGVRREQRTRKIILWCFGLVGALFGITGALMLAGPLSELFTFSLAMPAMQTMQATLFIVGAAAFYLWFMNDDFSLGG
(restricted) Ga0255040_1004959423300024059SeawaterVPDSSFDRELEALLEYSESPQPGAFVMDVMRGVRRERRTRRLILWAFGLVGALFGLAGAVMLSGSIERLFTFTLNMPAMETMQATLFIVGAAAFYLWIMNDDFSLGS
(restricted) Ga0255040_1006677713300024059SeawaterVPDSTFDRELEALLEYTEPPQPEAFTMNVMRSVKREQRTRRVILWAFGLVGALFGLAGAVMLSGSIARLFAFTITMPATETMQVVLFIVAAAAFYTWFMNDDLPLNQ
(restricted) Ga0255040_1014178623300024059SeawaterVPDSSFDRELEALLEYSDSPQPEAFTMDVMRGVKREQFTRKLILWAFGLVGALFGLAGAAMLSGSIARLLTFTVTMPVTETMQVVLFIVATAAFYIWFMNDDLPLDN
(restricted) Ga0255039_1051095913300024062SeawaterVPDSPFDRELEVLLEYTESPQPEAFTINVMRSVRREQRTRRLILWAFGLVGALFGLAGAVMLSGSIARLFTFTITMPATETMQVVLFIVAAAAFYTWFMNDDLPLDS
(restricted) Ga0255045_1034838413300024528SeawaterVPDSTFDRELETLLEYTESPQPEAFTMEVMHSVKREQRIRKLILWAFGLVGALFGLAGAVILSDSITRLFTFTVAMPATETMQVVLFIVAASAFYIWFMNDDLPLDN
(restricted) Ga0255045_1040387513300024528SeawaterIVPDSTFDRELEALLEYTEPPQPEAFTMNVMRSVKREQRTRRLILWAFGLVGALFGLAGAVMLSGSIARLFAFTITMPATETMQVVLFIVAAAAFYTWFMNDDLPLNQ
(restricted) Ga0255044_1047782723300024529SeawaterVPDSSFDRELEALLEYSESPQPGAFIMDVMRGVRRERRTRRLILWAFGLVGALFGLAGAVMLSGSIERLFTFTLNMPAMETMQATLFIVGAAAFYLWIMNDDFSLGS
Ga0210074_100885053300025599Natural And Restored WetlandsMKPVQDRHRRRNVPDSFERKLEQLLEYSEAPQAEAFTINVMRSIRREQRRRKIILWSFGLVGALFGLSGALMLTGPVSELLTFSLEMPVMKTMQVTLFVVGATAFYLWFMNDDFSLGS
Ga0210074_101202423300025599Natural And Restored WetlandsVPDSFDRKLEQLLKYSEAPQPEVFTMDVMRSVQRERRTRRIILWAFGLVGALFGLSGAFMLTGPVSELLTVSLQMPVMKTMQVTLFIVGAAAFYLWFMNDDFSLGG
Ga0210074_108921613300025599Natural And Restored WetlandsVPDSFDRKLEQLLEYTAAPQPEAFTLDVMRAVRREQRTRKIILWSFGLVGALFGLSGALMLTGPVNELLTFSLAMPAMQTMQATLFMVGAGAFYLWFMNDDFSLGG
Ga0209567_1022458413300025895Pelagic MarineVADSTFDRELEQLLGYPDSSQADAFVSNVMQRVKRERLRRRLILWTFGLVGALFGLAGAVMLSDSITRLFTFTLTLPVQETMQAVLFIV
Ga0210081_101243633300025970Natural And Restored WetlandsMKPVQGRHRRRNVPDSFERKLGQLLEYSDAPHAEAFTMNVMRSVRREQRRRKIILWSFGLVGALFGLSGALMLTGPVSELLTFSLEMPVMKTMQVTLFVVGATA
Ga0210130_105779123300026024Natural And Restored WetlandsQPKAFTMDVMRGVRRGQRTRKIILWAFGLVGALFGLSGASMLAGPVSELFSFSLAMPAMQTMQATLFIVGAAAFYLWFMNDDFSLGD
Ga0209578_1006228943300027820Marine SedimentVPEHGQELELERLLEYSDAPESGEFVVSVMNSVKREQRSRTLILWVFGLLGALFGLAGAVMLSDSIARLFSFTVYMPATETTQMVLFIVAAVAFYSWVMNDDLAVGG
Ga0209344_1009777923300027834MarineVPDTPFDRELEALLEYTEPPQPEAFTMNVMRSVKREQRTRRLILWAFGLVGALFGLAGAVMLSGSIARLFTFTITMPATETMQVVLFIVAAAAFYIWFMNDDLPLNQ
(restricted) Ga0255041_1006926623300027837SeawaterVPDSSFDRELEALLEYSASPQPEAFTMDVMRGVKREQLTRKLILWAFGLVGALFGLAGAVMLSGSITRLLTFTVTMPATETMQVVLFIVAAAAFYIWFMNDDLPLDN
(restricted) Ga0255041_1009578133300027837SeawaterVPDSTFDRELEALLEYTEPPQPEAFTMNVMRSVKREQRTRRVILWAFGLVGALFGLAGAVMLSGSIARLFAFTITMPATETMQVVLFIVAAAAFYT
Ga0209271_1025399213300027845Marine SedimentVPDSSFDRELEALLEYSASPQPEAFTMDVMRGVKREQFTRKLILWAFGLVGALFGLAGAVMLSGSITRLLTFTVTMPATETMQVVLFIVATAAFYIWFMNDDLPLDN
Ga0209345_1023561923300027852MarineVPDTPFDRELEALLEYTEPPQPEAFTMNVMRSVKREQRTRRLILWAFGLVGALFGLAGAVMLSGSIARLFTFTITMPATETMQVALFIVAAAAFYIWFMNDDLPLNQ
Ga0209013_1000318473300027858MarineVPDSTFDRELETLLEYTESPQPEAFTMDVMRSVNREQRIRKLILWTFGLVGALFGLAGAVILSDSITRLFTFTVAMPATETMQVVLFIVATAAFYVWFMNDDLPLDN
Ga0209013_1041431023300027858MarineVPDSTFDRELETLLEYSESPQGEAFIMDVMRSVKRERRTRKLILWAFGLVGALFGLAGAVILSNSITRLFTFTISMPATETMQVVLFIVAAAAFYIWIMNDDLPLDN
(restricted) Ga0233413_1050657923300027996SeawaterVPDSTFDRELETLLEYTESPQPEAFTMEVMHSVKREQRIRKLILWAFGLVGALFGLAGAVILSDSITRLFTFTVAMPATETMQVVLFIVAASAFY
Ga0265306_1007165623300028598SedimentMGRQRRPDVPDSSFDRELEALLEYRELPRAETFVLDVMRGIKREQRTRKVILWAFGLVGALFGMAGAVMLSDSITQLFSFTITMPVTETMQVVLFIVGAAAFYNWIMNDDFSLGS
Ga0265303_1005747833300028600SedimentMGRQRRPDVPDSSFDRELEALLEYRELPRAETFVLDVMRGIKREQRTRKVILWAFGLVGALFGMVGAVMLSDSITQLFSFTITMPVTETMQVVLFIVGAAAFYTWFMNDDLSLGS
Ga0316578_1069983823300031728RhizosphereVPDAFDRNLEQLLEYPDVPGGEAFVMDVMQSVRRETRRRRLILWVFGLTGALFGLWGASILSGPVGEWLTGALSFPVTQTMQTSLFLVGAAAFYLWFMNDDFSLGDW
Ga0316201_1039876323300032136Worm BurrowVPDSFDHELERLLAYTGAPQPEAFVLDVMRSVKREQRFRKLILWVFGLVGAVFGLAGAVMLSGSISRLFTFTVDLPATETMQATLFVVGAAAFYLWFMNDDFSLDS
Ga0316201_1126823113300032136Worm BurrowVPDSFDHELERLLAYTGAPKPEAFVLDVMRSVKREQRFRKLILWVFGLVGAVFGLAGAVMLSGSISRLFTFTVDLPATETMQATLFIVGAAAFYLWFMNDDFSLDN
Ga0316187_1016350623300032231Worm BurrowVPDSLDRGLEQLLEYSEAPQADAFVMNVMDGVRREQRTRKIILWAFGLIGALFGLLGAVMLSGPIGHLLTFGQAIPVMELMQATLFVVAAAAFYLWFMNDDFSLGG
Ga0316198_1029449813300032251SedimentVPDSIDRELEQLLAYNEAPQPEAFVLDVMRSVKREQRIRKLILWVFGLVGAVFGVAGAVMLSGSISRLFTFTVELPAMETMQVTLFIVGAAAFYLWFMNDDFSLDS
Ga0316196_1001513633300032252SedimentVPDSFDHELKQLLAYTEAPQPEAFVLDVMRSVKREQRIRRVILWVFGLVGAVFGLAGAVMLSDSISRLFTFTVDLPAMETMQATLFIVGAAAFYLWFMNDDFSLGS
Ga0316196_1005441043300032252SedimentVPDSIDRELEQLLAYTEAPQPEAFVLDVMRSVKREQRIRKVILWVFGLVGAAFGLAGAVMLSGSISRLFTFTVELPAMETMQVTLFIVGAAAFYLWFMNDDFSLDS
Ga0316191_1082362513300032258Worm BurrowVPDSFDRELEQLLEYTEDKQPELFVMNVMRGVRREQRTRKVVLWVCGLVGALFGLAGAAMLSGPISHLFTFNLDLPVTQIMQGVLFTVGAAAFYLWIMNDDFSLGG
Ga0316191_1122329723300032258Worm BurrowVPDSLDRGLEQLLEYSEAPQADAFVMNVMDGVRREQRTRKIILWAFGLIGALFGLLGAVMLSGPIGHLLTFGQAMPVIELMQATLFVVAAAAFYLWFMNDDFSLGG
Ga0316190_1032998623300032259Worm BurrowVPDSFDHELKQLLAYTEAPQPEAFVLDVMRSVKREQRIRKLILWVFGLVGAVFGLAGAVMLSGSISRLFTFTVELPAMETMQVTLFIVGAAAFYLWFMNDDFSLDS
Ga0316194_1028898523300032262SedimentVPDSIDRELEQLLAYNEAPQPEAFVLDVMRSVKREQRIRKLILWVFGLVGAVFGLAGAVMLSGSISRLFTFTVELPAMETMQVTLFIVGAAAFYLWFMNDDFSLDS
Ga0316195_1010582123300032263SedimentRGPKVPDSFDHELKQLLAYTEAPQPEAFVLDVMRSVKREQRIRRVILWVFGLVGAVFGLAGAVMLSDSISRLFTFTVDLPAMETMQATLFIVGAAAFYLWFMNDDFSLGS
Ga0316195_1011482113300032263SedimentMKPVQDRHRRRNVPDSLDRKLEQLLEYGEAPLPETFTMNVMRGVRREQRTRKIILWCFGLVGALFGITGALMLAGPLSELFTFSLAMPAMQTMQATLFVVGAGAFYLWFMNDDFSLGS
Ga0316195_1020027323300032263SedimentVPDSFDRKLEQLLEYTEAPQPEAFTMGVMRGVRREQRTRKIILWAFGLVGALFGLSGALMLTGPVSELFTFSLALPAMETMQATLFIVGAAAFYLWFMNDDFSLGD
Ga0316197_1008891923300032273SedimentVPDSTDRELEQLLAYNEAPQPEAFVLDVMRSVKREQRIRKLILWVFGLVGAVFGVAGAVMLSGSISRLFTFTVELPAMETMQVTLFIVGAAAFYLWFMNDDFSLDS
Ga0316193_1008434123300033429SedimentVPDSIDRELEQLLAYTEAPQSEAFVLDVMRSVKREQRIRKVILWVFGLVGAAFGLAGAVMLSGSISRLFTFTVELPAMETMQVTLFIVGAAAFYLWFMNDDFSLDS
Ga0316193_1042407013300033429SedimentSFDRELEQLLEYSEAPHPETFVMDVMQGVRRQQRTRKIILWAFGLIGALFGLLGAVMLSGPIGHLLTFGQAMPVIELMQATLFVVAAAAFYLWFMNDDFSLGG
Ga0316193_1085424113300033429SedimentYGRHRRRKVPDSLDRGLEQLLEYSEAPQADAFVMNVMDGVRREQRTRKIILWAFGLIGALFGLLGAVMLSGPIGHLLTFGQAIPVMELMQATLFVVAAAAFYLWFMNDDFSLGG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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