Metagenome / Metatranscriptome Family F105456

Basic Information
Family ID	F105456
Family Type	Metagenome / Metatranscriptome
Number of Sequences	100
Average Sequence Length	93 residues
Representative Sequence	FVDAREQALALAEPALRARWESLSVNEQRVSVALAASARTLYADETLRFLGLRRGSVGRALSGLIGKAEARMTEAGPELTDPLLEHWLAERGVF
Number of Associated Samples	90
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (29.000 % of family members)
Environment Ontology (ENVO)	Unclassified (40.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 85.11% β-sheet: 0.00% Coil/Unstructured: 14.89%
Feature Viewer

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Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF03466	LysR_substrate	49.00
PF00126	HTH_1	36.00
PF00465	Fe-ADH	10.00
PF05683	Fumerase_C	2.00
PF04007	DUF354	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG0337	3-dehydroquinate synthetase	Amino acid transport and metabolism [E]	10.00
COG0371	Glycerol dehydrogenase or related enzyme, iron-containing ADH family	Energy production and conversion [C]	10.00
COG1454	Alcohol dehydrogenase, class IV	Energy production and conversion [C]	10.00
COG1979	Alcohol dehydrogenase YqhD, Fe-dependent ADH family	Energy production and conversion [C]	10.00
COG1838	Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain	Energy production and conversion [C]	2.00
COG0381	UDP-N-acetylglucosamine 2-epimerase	Cell wall/membrane/envelope biogenesis [M]	1.00
COG1817	Predicted glycosyltransferase	General function prediction only [R]	1.00

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.00%
Host-Associated	Host-Associated	31.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.00%
Plants	Host-Associated → Plants	31.00%
Aquatic	Environmental → Aquatic	9.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.00%
Marine	Environmental → Aquatic → Marine	5.00%
Freshwater	Environmental → Aquatic → Freshwater	3.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.00%
Sediment	Environmental → Aquatic → Sediment	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.00%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.00%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.00%
Ice	Environmental → Aquatic → Freshwater → Ice	2.00%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.00%
Sediment	Environmental → Aquatic → Marine → Sediment	1.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.00%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.00%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.00%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	2.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.00%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.00%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	1.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.00%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	29.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.00%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	5.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.00%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.00%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	2.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.00%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.00%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.00%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	1.00%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.00%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.00%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.00%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002124	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300012527	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014259	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1	Environmental	Open in IMG/M
3300014267	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1	Environmental	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300022226	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_13	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026062	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026090	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027657	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125 HiSeq	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_116812372	3300000891	Soil	DLVPRGSVADEAAWVDARDRALAQAESALRARWQSLAVNEQRVSLALATRARNLYAEETVRFLGLKKGSVDRALAGLVGKAEARQTPAGPELTDPLLEHWLAERGLF*
JGI10216J12902_1268442282	3300000956	Soil	VDARERALALAEPALRARWESFSVNEQRVSVALAASSRTLYAEETLRFLGLRRGSVGRALSGLVGKAEVRLTDAGPELTDPLLDHWLSERGVF*
C687J26631_100991731	3300002124	Soil	AHHLWELVPAGSVADESAFVEARERALAQADPALRARWESLAVNEQRVSVALATRTGGLYAEETLRFLGLKKGSIDRALAGLVGKAEARITPAGPELTDPLLELWLAERGVF*
soilL2_101253163	3300003319	Sugarcane Root And Bulk Soil	ALAEPALRARWESFSVNEQRVSVALAASQRTLYAEETLRFLGLRRGSVGRALSGLIGKAEVRMTEAGPELTDPLLEHWLAERGVF*
Ga0055471_100412901	3300003987	Natural And Restored Wetlands	LWELVPPGSTADEAAFVDAREQALALAEPALRARWESFSVNEQRVSVALAASSRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMTEGGPELTDPLLEHWLAERGVF*
Ga0055468_102520392	3300003993	Natural And Restored Wetlands	PRGSVADEAAWVDARDRALAQAEPALRARWQSLAVNEQRVSLALATRARNLYAEETVRFLGLKKGSVDRALAGLVGKAEARQTPAGPELTDPLLEHWLAERGLF*
Ga0055469_102962732	3300003999	Natural And Restored Wetlands	RERALSQAEAALRARWQSLAVNEQRVSLALATRARNLYAEETGRFVGLKKGSVDRALAGLVGKAEARVGAAGPELTDPLLEHWLAERGLF*
Ga0066807_10189572	3300005161	Soil	VDARERSLALTEPALRARWESLSVNEQRVSVALAIPSRSLYAEETLRFLGLRKGSVDRALSGLIGKAEVRLTGAGAQLTDPLLEHWLAERGLF*
Ga0066388_1060915992	3300005332	Tropical Forest Soil	SVNEQRVTVALAVPSRSLYADETLRFLGLRKGSVDRALAGLVGKAEARVTDVGPVLTDPLLEHWLAERGWF*
Ga0070680_1015865762	3300005336	Corn Rhizosphere	ALAEPALRARWESLSVNEQRVSVALAASARTLYADETLRFLGLRRGSVGRALSGLIGKAEARMTEAGPELTDPLLEHWLAERGVF*
Ga0070687_1001418443	3300005343	Switchgrass Rhizosphere	QRVMLVAHHLWEILPRGSTADEAAFVDARERALALAEPALRARWESFSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMAGGGPELTDPLLEHWLAERGVF*
Ga0070668_1006569631	3300005347	Switchgrass Rhizosphere	RWESFSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMADRGPELTDPLLEHWLAERGVF*
Ga0070674_1008395251	3300005356	Miscanthus Rhizosphere	HLWEIVPPGSTADEAAFVDARERALALAEPALRARWESFSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMGAAGPELTDPLLEHWLAERGVF*
Ga0070673_1002870691	3300005364	Switchgrass Rhizosphere	ALRARWESFSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMAGGGPELTDPLLEHWLAERGVF*
Ga0070694_1008736641	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	ARERALGLAEPALRARWESFSVNEQRVSVALAASQRTLYAEETLRFLGLRRGSVGRALSGLIGKAEVRMTDAGPELTDPLLEHWLAERGVF*
Ga0068867_1001370811	3300005459	Miscanthus Rhizosphere	GSTADEAAFVDARERALALAEPALRARWESFSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMAGGGPELTDPLLEHWLAERGVF*
Ga0070664_1004679751	3300005564	Corn Rhizosphere	SVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMAGGGPELTDPLLEHWLAERGVF*
Ga0070702_1005266821	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	FVDAREQALALAEPALRARWESLSVNEQRVSVALAASARTLYADETLRFLGLRRGSVGRALSGLIGKAEARMTEAGPELTDPLLEHWLAERGVF*
Ga0075422_105507321	3300006196	Populus Rhizosphere	WESFSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMSAAGPELTDPLLQHWLAERGVF*
Ga0074051_100099682	3300006572	Soil	RWESLSVNEQRVSVALAIPSRSLYAEETLRFLGLRKGSVDRALSGLIGKAEVRLTGAGAQLTDPLLEHWLAERGLF*
Ga0074047_112771452	3300006576	Soil	ARERALALTEAALRARWESLSVNEQRVTVALAIPSRSLYSEETLRVLGLRKGSVDRALSGLVGKAEARVTGGRAQLTDPLLEHWLGERGLF*
Ga0075428_1024848131	3300006844	Populus Rhizosphere	ARERALALAEPALRARWESFSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMSAAGPELTDPLLQHWLAERGVF*
Ga0075421_1008801262	3300006845	Populus Rhizosphere	PGSTGDEAAFVDARERALALAEPALRARWESFSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMSAAGPELTDPLLQHWLAERGVF*
Ga0075431_1012456911	3300006847	Populus Rhizosphere	RARWESFSVNEQRVSVALAASARTLYAEETLRFLGLRRGSVGRALSGLVGKAEVRVTDTGPELTDPLLEYWLAERGVF*
Ga0075425_1001752411	3300006854	Populus Rhizosphere	VAHHLWELVPEGSVADEAAFLDARDAALAIAEPALRARWESLSVNEQRVTVALAVPSRSLYADETLRFLGLRKGSVDRALAGLVGKAEARATDAGPVLTDPLLEHWLAERGWF*
Ga0068865_1005835962	3300006881	Miscanthus Rhizosphere	AEPALRARWESFSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMAGGGPELTDPLLEHWLAERGVF*
Ga0075419_104125651	3300006969	Populus Rhizosphere	ADEEAFVDAREQALALAEPALRARWESFSVNEQRVSVALAASARTLYAEETLRFLGLRRGSVGRALSGLVGKAEVRVTDAGPELTDPLLEHWLAERGVF*
Ga0075419_115078881	3300006969	Populus Rhizosphere	AREQALALAEPALRARWESFSVNEQRVSVALAASARTLYAEETLRFLGLRRGSVGRALSGLVGKAEVRVTDAGPELTDPLLEYWLAERGVF*
Ga0111539_103854723	3300009094	Populus Rhizosphere	MLVAHHLWELVPPGSTADEAAFVDARERALALAEPALRARWESFSVNEQRVSVALAASARTLYAEETLRFLGLRRGSVGRALSGLVGKAEVRVTDAGPELTDPLLEHWLAERGVF*
Ga0105243_117619732	3300009148	Miscanthus Rhizosphere	LALAEPALRARWESFSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMGAAGPELTDPLLEHWLAERGVF*
Ga0105242_102045483	3300009176	Miscanthus Rhizosphere	SSADEAAFVDAREQALALAEPALRARWESLSVNEQRVSVALAASARTLYADETLRFLGLRRGSVGRALSGLIGKAEARMTEAGPELTDPLLEHWLAERGVF*
Ga0105249_120268172	3300009553	Switchgrass Rhizosphere	LMLVAHHLWELVPPGSTADEEAFVDARERALALAEPALRARWESFSVNEQRVSVVLAASARTLYAEETLRFLGLRRGSVGRALSGLVGKAEVRVTDTGPELTDPLLEYWLAERGVF*
Ga0126377_121634391	3300010362	Tropical Forest Soil	DEAAFLDARDAALTIAEPALRARWESLSVNEQRVTVALAVPSRSLYADETLRFLGLRKGSVDRALAGLVGKAEARLTESGPVLTDPLLEHWLAERGWF*
Ga0126377_134393942	3300010362	Tropical Forest Soil	EAAFVDAREAAVAIAEPALRARWEALSVNEQRVTVALAVPARSLYADETLRFLGLRKGSVDRALAGLVGKAEARVTEAGPALTDPLLEHWLAERGWF*
Ga0137428_10776092	3300011432	Soil	VADESAFADARSRALGHAEPALRSRWESFAVNEQRVSLALATHLRNLYSEETLRVLGLKKGSVDRALSGLVGKAEARLTAAGPELTDPLLEDWLAERGLF*
Ga0136633_12565351	3300012527	Polar Desert Sand	SLAVNEQRVSLALSTRSQTLDAEDTLRVLGLKKGSVARALAGLVGQAEAHRTPHGPELTDPMLEHWLAERGLY*
Ga0157291_100243182	3300012902	Soil	ADESAWVDGRDRALAQAEPALRARWGSLSVNEQRVSLALATRARNLYAEETVRFLGLKKGSVDRALAGLVGKAEARLTPAGPELTDPLLEHWLAERGLF*
Ga0157290_101772612	3300012909	Soil	ERALGLAEPALRARWESFSVNEQRVSVALAASQRTLYAEETLRFLGLRRGSVGRALSGLIGKAEVRMTDAGPELTDPLLEHWLAERGVF*
Ga0157301_100573472	3300012911	Soil	HLWEIVPPGSTAEEAAFVDARERALGLAEPALRARWESFSVNEQRVSVALAASQRTLYAEETLRFLGLRRGSVGRALSGLIGKAEVRMTDAGPELTDPLLEHWLAERGVF*
Ga0157306_104546402	3300012912	Soil	ARWQSLAVNEQRVSLALATRARNLYAEETVRFLGLKKGSVDRALAGLVGKAEARQTPAGPELTDPLLEHWLAERGLF*
Ga0157302_101477912	3300012915	Soil	EPALRARWESFSVNEQRVSVALAASQRTLYAEETLRFLGLRRGSVGRALSGLIGKAEVRMTEAGPELTDPLLEHWLAERGVF*
Ga0126369_124206202	3300012971	Tropical Forest Soil	LRARWEALSVNEQRVTVALAVPSRSLYADETLRFLGLRKGSVDRALAGLVGKAEARMTDAGPVLTDPLLEHWLAERGWF*
Ga0164309_105083241	3300012984	Soil	RDAALAIAEPALRARWESLSVNEQRVTVALAVPSRSLYADETLRFLGLRKGSVDRALAGLVGKAEARIADAGPVLTDPLLEHWLAERGWF*
Ga0157307_11129051	3300013096	Soil	AFVDARERALALAEPALRARWESFSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMGAAGPELTDPLLEHWLAERGVF*
Ga0157378_128320191	3300013297	Miscanthus Rhizosphere	LVPTGSSADEAAFVDAREQALALAEPALRARWESLSVNAQRVSVALAASARTLYADETLRFLGLRRGSVGRALSGLIGKAEARMTEAGPELTDPLLEHWLAERGVF*
Ga0157375_117893912	3300013308	Miscanthus Rhizosphere	STADEAAFVDAREQALALAEPALRARWESLSVNEQRVSVALAASARTLYADETLRFLGLRKGSVDRALAGLVGKADARATDAGPVLTDPLLEHWLAERGWF*
Ga0075311_11361831	3300014259	Natural And Restored Wetlands	LRARWESLAVNEQRVSLALATRTRNLYAEETIRFLGLKKGSVDRALAGLVGKAEARVGAAGPELTDPLLEHWLAERGLF*
Ga0075313_10212823	3300014267	Natural And Restored Wetlands	VADEGTFVEARTRALAHAEPALRARWEALTVNEQRVSVALATRRSGGLYSEETLRLLGLKKGSIDRALAGLLGKAEAYAGPAGPTLTDPLLEHWLAERGVF*
Ga0075326_10202343	3300014271	Natural And Restored Wetlands	MLLAHQLWDLVPRGSVADESAWVDARTRALAQAEPALRARWGSLSVNEQRVSLALATRARNLYAVETVRFLGLKKGSVDRALAGLVGKAEARVGAAGPELTDPLLEHWLAERGLF*
Ga0157380_100477996	3300014326	Switchgrass Rhizosphere	VNEQRVSVALAASARTLYADETLRFLGLRRGSVGRALSGLIGKAEARMTEAGPELTDPLLEHWLAERGVF*
Ga0157376_103199831	3300014969	Miscanthus Rhizosphere	LAEPALRARWESLSVNEQRVSVALAASARTLYADETLRFLGLRRGSVGRALSGLIGKAEARMTEAGPELTDPLLEHWLAERGVF*
Ga0173478_103509181	3300015201	Soil	RARWQSLAVNEQRVSLALATRARNLYAEETVRFLGLKKGSVDRALAGLVGKAEARQTPAGPELTDPLLEHWLAERGLF*
Ga0173478_106641131	3300015201	Soil	HHLWEIVPPGSTGDEAAFVDARERALALAEPALRARWESFSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMSAAGPELTDPLLQHWLAERGVF*
Ga0136617_109357392	3300017789	Polar Desert Sand	EQRVSLALATRAQNLYAEDTLRVLGLKKGSVDRALAGLVGKAEAHRTSHGPELTDPLLEHWLAERGLY
Ga0190265_100747675	3300018422	Soil	VNEQRVSLALATRTRNLYAEETLRFLGLKKGSVDRALAGLVGKAEARATQSGPELTDPLLEHWLAERGLF
Ga0190265_105493502	3300018422	Soil	AFVDARGAALGHAETALRARWEALAVNEQRVSLALATRTRNLYAEETLRFLGLKKGSVDRALAGLVGKAEARQGPSGPELTDPLLEHWLGERGLF
Ga0173481_100653951	3300019356	Soil	HLWEIVPPRSTADEAAFVDARERALALAEPALRARWESFSVNEQRVSVALAASRRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMSAAGPELTDPLLQHWLAERGVF
Ga0210378_103160271	3300021073	Groundwater Sediment	FVDARARALAHAEIALRARWESLAVNEQRVSLALATRAQNLYAEDTLRVLGLKKGSVDRALAGLVGKAEARRTPYGPELTDPLLEHWLAERGLF
Ga0224512_100571883	3300022226	Sediment	HAAALAAAAPALRARWEALPVNEQRVAVALAMRPGGLYAEETLRPLGLKRGSVDRALAGLVGRGEALRLAAGPELTDPLLEAWLVDRGLF
Ga0247788_10003481	3300022901	Soil	HHLWDLVPRGSVADEAAWVDARNRALAQAEPALRARWGSLSVNEQRVSLALATRARNLYAVETVRFLGLKKGSVDRALAGLVGKAEARLTPAGPELTDPLLEHWLAERGLF
Ga0247790_100361652	3300022915	Soil	NRALAQAEPALRARWGSLSVNEQRVSLALATRARNLYAVETVRFLGLKKGSVDRALAGLVGKAEARLTPAGPELTDPLLEHWLAERGLF
Ga0247793_10132371	3300023066	Soil	SVNEQRVSVALAASQRTLYAEETLRFLGLRRGSVGRALSGLIGKAEVRMTEAGPELTDPLLEHWLAERGVF
Ga0210087_10005481	3300025559	Natural And Restored Wetlands	GSVADESAWVDARTRALAQAEPALRARWGSLSVNEQRVSLALATRARNLYAVETVRFLGLKKGSVDRALAGLVGKAEARLTAAGPELTDPLLEHWLAERGLF
Ga0207653_100995032	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	DARERALGLAEPALRARWESFSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMAGGGPELTDPLLEHWLAERGVF
Ga0207682_100580492	3300025893	Miscanthus Rhizosphere	LSGAGSFVAGSVTSSMSAPVPALRARWESFSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMAGGGPELTDPLLEHWLAERGVF
Ga0207681_110558821	3300025923	Switchgrass Rhizosphere	PVVKRVMLIAHHLWEIVPPGSTADEAAFVDARERALGLAEPALRARWESFSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMAGGGPELTDPLLEHWLAERGV
Ga0207686_102871821	3300025934	Miscanthus Rhizosphere	TGSSADEAAFVDAREQALALAEPALRARWESLSVNEQRVSVALAASARTLYADETLRFLGLRRGSVGRALSGLIGKAEARMTEAGPELTDPLLEHWLAERGVF
Ga0207709_105743562	3300025935	Miscanthus Rhizosphere	RALAQAESALRARWQSLAVNEQRVSLALATRARNLYAEETVRFLGLKKGSVDRALAGLVGKAEARQTPAGPELTDPLLEHWLAERGLF
Ga0207709_113129611	3300025935	Miscanthus Rhizosphere	FSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMGAAGPELTDPLLEHWLAERGVF
Ga0207670_105756652	3300025936	Switchgrass Rhizosphere	MLVAHHLWEILPRGSTADEAAFVDARERALALAEPALRARWESFSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMAGGGPELTDPLLEHWLAERGVF
Ga0207669_102737771	3300025937	Miscanthus Rhizosphere	AEPALRARWESLSVNEQRVSVALAASARTLYADETLRFLGLRRGSVGRALSGLIGKAEARMTEAGPELTDPLLEHWLAERGVF
Ga0207669_106006422	3300025937	Miscanthus Rhizosphere	EIVPPGSTADEAAFVDARERALALAEPALRARWESFSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMGAAGPELTDPLLEHWLAERGVF
Ga0207689_101286213	3300025942	Miscanthus Rhizosphere	STADEAAFVDARARALALAEPALRARWESFSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMAGGGPELTDPLLEHWLAERGVF
Ga0207712_112979271	3300025961	Switchgrass Rhizosphere	LMLVAHHLWELVPPGSTADEEAFVDARERALALAEPALRARWESFSVNEQRVSVVLAASARTLYAEETLRFLGLRRGSVGRALSGLVGKAEVRVTDTGPELTDPLLEYWLAERGVF
Ga0207668_101090771	3300025972	Switchgrass Rhizosphere	ALRARWESFSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMADRGPELTDPLLEHWLAERGVF
Ga0208654_10261812	3300026062	Natural And Restored Wetlands	LRQAEPALRARWQSLAVNEQRVSLALATRARNLYAEETVRFVGLKKGSVDRALAGLVGKAEARIGPAGPELTDPLLEHWLAERGLF
Ga0207708_101434993	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	ALRARWESLSVNEQRVSVALAASARTLYADETLRFLGLRRGSVGRALSGLIGKAEARMTEAGPELTDPLLEHWLAERGVF
Ga0207708_105371152	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	IVPPGSTADEAAFVDARERALALAEPALRARWESFSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMGAAGPELTDPLLEHWLAERGVF
Ga0208912_10699252	3300026090	Natural And Restored Wetlands	NQQRVSLALATRARNLYAEETGRFVGLKKGSVDRALAGLVGKAEARVGAAGPELTDPLLEHWLAERGLF
Ga0256867_101365761	3300026535	Soil	LRARWESLAVNEQRVSLALATRTRNLYAEETLRFLGLKKGSVDRALAGLVGKAEAYGTPRGPELTDPLLELWLAERGLF
Ga0256865_11858462	3300027657	Soil	ADESTFVDAREQALQHAQTAIRARWESLAVNEQRVSLALATRARNLYAEETLRFLGLKKGSVDRALAGLIGKAEAHQTGAGPELTDPLLEHWLAERGLF
Ga0307295_100542091	3300028708	Soil	LSVNEQRVSVALAIPSRSLYAEETLRFLGLRKGSVDRALSGLIGKAEVRLTGAGAQLTDPLLEHWLSERGLF
Ga0307319_103260702	3300028722	Soil	RALALTEPALRARWESLSVNEQRVSIALAVPSRSLYAEETLRFLGLRKGSVDRALSGLVGKAEVRSTAAGPQLTDPLLEHWLAERGLF
Ga0307280_100782302	3300028768	Soil	GSPADETAFVDARERSLALTEPALRARWESLSVNEQRVSVALAIPSRSLYAEETLRFLGLRKGSVDRALSGLIGKAEVRLTGAGAQLTDPLLEHWLSERGLF
Ga0307306_101424281	3300028782	Soil	ESLSVNEQRVSVALAIPSRSLYAEETLRFLGLRKGSVDRALSGLIGKAEVRLTGAGAQLTDPLLEHWLSERGLF
Ga0307323_103113931	3300028787	Soil	RARWESLSVNEQRVSVALAIPSRSLYADETLRFLGLRKGSVDRALSGLVGKAEARITSAGPELTDPLLEHWLAERGLF
Ga0307290_102931421	3300028791	Soil	LWELVPRGSPADETAFVDARERSLALTEPALRARWESLSVNEQRVSVALAIPSRSLYADETLRFLGLRKGSVDRALSGLVGKAEVRLTGAGAQLTDPLLEHWLAERGLF
Ga0307296_101908221	3300028819	Soil	ALTEPALRARWESLSVNEQRVSVALAIPSRSLYADETLRFLGLRKGSVDRALSGLVGKAEARITSAGPELTDPLLEHWLAERGLF
Ga0307289_100565241	3300028875	Soil	AHHLWEVLPAGSVADETAFVDARERSLALTEPALRARWESLSVNEQRVSVALAIPSRSLYADETLRFLGLRKGSVDRALSGLVGKAEARITSAGPELTDPLLEHWLAERGLF
Ga0307289_104793231	3300028875	Soil	DARERSLALTEPALRARWESLSVNEQRVSVALAIPSRSLYADETLRFLGLRKGSVDRALSGLVGKAEVRLTGAGAQLTDPLLEHWLAERGLF
Ga0307286_101141192	3300028876	Soil	RTMLVAHHLWEVVPAGSVADETAFVDARERSLALTEPALRARWESLSVNEQRVSVALAIPSRSLYADETLRFLGLRKGSVDRALSGLVGKAEARITSAGPELTDPLLEHWLAERGLF
Ga0307286_101252542	3300028876	Soil	TAFVDARERSLALTEPALRARWESLSVNEQRVSVALAIPSRSLYAEETLRFLGLRKGSVDRALSGLIGKAEVRLTGAGAQLTDPLLEHWLSERGLF
Ga0307308_102725921	3300028884	Soil	WELVPAGSPADETAFVDARERSLALTEPALRARWESLSVNEQRVSVALAIPSRSLYAEETLRFLGLRKGSVDRALSGLIGKAEVRLTGAGAQLTDPLLEHWLSERGLF
Ga0247826_103605991	3300030336	Soil	IMLIAHHLWEIVPPGSTADEAAFVDARERALALAEPALRARWESFSVNEQRVSVALAASRRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMSAAGPELTDPLLQHWLAERGVF
Ga0247826_104602222	3300030336	Soil	AGSTADEAAFVDAREQALALAEPALRARWESLSVNEQRVSVALAASARTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMTEAGPELTDPLLDHWLAERGVF
Ga0307498_104486632	3300031170	Soil	AALAIAEPALRARWEALSVNEQRVTVALAVPARSLYAEETLRFLGLRKGSVDRALAGLVGKAEVRVTNAGPVLTDPLVEHWLAERGWF
Ga0307497_100680713	3300031226	Soil	EPALRARWEALSVNEQRVTVALAVPARSLYAEETLRFLGLRKGSVDRALAGLVGKAEVRVTDAGPVLTDPLVEHWLAERGWF
Ga0310813_107805482	3300031716	Soil	AFVDARERALALAEPALRARWESFSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMAGGGPELTDPLLEHWLAERGVF
Ga0310907_105536491	3300031847	Soil	VSVNEQRVSVALAASQRTLYADETLRFLGLRRGSVGRALSGLIGKAEVRMGAAGPELTDPLLQHWLAERGVF
Ga0310906_105221011	3300032013	Soil	DARNRALAQAEPALRARWGSLSVNEQRVSLALATRARNLYAVETVRFLGLKKGSVDRALAGLVGKAEARLTPAGPELTDPLLEHWLAERGLF

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F105456

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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