NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F105511

Metagenome Family F105511

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105511
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 39 residues
Representative Sequence SAIKNMDASKFSKGVARIKENQDIKNNVLKIKDGEYKED
Number of Associated Samples 91
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 85.00 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (54.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(23.000 % of family members)
Environment Ontology (ENVO) Unclassified
(70.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(82.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 10.26%    β-sheet: 0.00%    Coil/Unstructured: 89.74%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF05050Methyltransf_21 2.00
PF04055Radical_SAM 1.00


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms80.00 %
UnclassifiedrootN/A20.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10240966All Organisms → cellular organisms → Bacteria → Proteobacteria576Open in IMG/M
3300000167|SI39nov09_120mDRAFT_c1030981All Organisms → Viruses → Predicted Viral1272Open in IMG/M
3300001419|JGI11705J14877_10068207All Organisms → Viruses → Predicted Viral1139Open in IMG/M
3300001460|JGI24003J15210_10176710All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37521Open in IMG/M
3300005521|Ga0066862_10149396Not Available785Open in IMG/M
3300005599|Ga0066841_10060004All Organisms → cellular organisms → Bacteria → Proteobacteria621Open in IMG/M
3300005913|Ga0075108_10195264Not Available705Open in IMG/M
3300005971|Ga0066370_10260814All Organisms → cellular organisms → Bacteria → Proteobacteria615Open in IMG/M
3300006190|Ga0075446_10055565All Organisms → Viruses → Predicted Viral1216Open in IMG/M
3300006327|Ga0068499_1247635All Organisms → cellular organisms → Bacteria → Proteobacteria706Open in IMG/M
3300006738|Ga0098035_1233579All Organisms → cellular organisms → Bacteria → Proteobacteria608Open in IMG/M
3300006749|Ga0098042_1141204All Organisms → cellular organisms → Bacteria → Proteobacteria593Open in IMG/M
3300006789|Ga0098054_1177270All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37781Open in IMG/M
3300006916|Ga0070750_10376657All Organisms → cellular organisms → Bacteria → Proteobacteria595Open in IMG/M
3300006924|Ga0098051_1210072All Organisms → cellular organisms → Bacteria → Proteobacteria506Open in IMG/M
3300006990|Ga0098046_1033899All Organisms → Viruses → Predicted Viral1238Open in IMG/M
3300007609|Ga0102945_1024243All Organisms → Viruses → Predicted Viral1312Open in IMG/M
3300007756|Ga0105664_1036727All Organisms → cellular organisms → Bacteria → Proteobacteria673Open in IMG/M
3300007960|Ga0099850_1270920All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37650Open in IMG/M
3300008012|Ga0075480_10128321All Organisms → Viruses → Predicted Viral1396Open in IMG/M
3300009000|Ga0102960_1251559All Organisms → cellular organisms → Bacteria → Proteobacteria626Open in IMG/M
3300009001|Ga0102963_1081990All Organisms → Viruses → Predicted Viral1321Open in IMG/M
3300009409|Ga0114993_11134390All Organisms → cellular organisms → Bacteria → Proteobacteria552Open in IMG/M
3300009433|Ga0115545_1207448All Organisms → cellular organisms → Bacteria → Proteobacteria666Open in IMG/M
3300009438|Ga0115559_1060335All Organisms → Viruses → Predicted Viral1591Open in IMG/M
3300009438|Ga0115559_1271336All Organisms → cellular organisms → Bacteria → Proteobacteria599Open in IMG/M
3300009449|Ga0115558_1384407All Organisms → cellular organisms → Bacteria → Proteobacteria549Open in IMG/M
3300009472|Ga0115554_1052910All Organisms → Viruses → Predicted Viral1832Open in IMG/M
3300009512|Ga0115003_10165615All Organisms → Viruses → Predicted Viral1338Open in IMG/M
3300009526|Ga0115004_10661793All Organisms → cellular organisms → Bacteria → Proteobacteria619Open in IMG/M
3300009786|Ga0114999_10570603Not Available863Open in IMG/M
3300010151|Ga0098061_1032065All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED372107Open in IMG/M
3300010297|Ga0129345_1130566Not Available915Open in IMG/M
3300011013|Ga0114934_10458642All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37565Open in IMG/M
3300012919|Ga0160422_10043311All Organisms → Viruses → Predicted Viral2610Open in IMG/M
3300012919|Ga0160422_10446496All Organisms → cellular organisms → Bacteria → Proteobacteria809Open in IMG/M
3300012953|Ga0163179_10014208All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED415219Open in IMG/M
3300012953|Ga0163179_10083635All Organisms → Viruses → Predicted Viral2271Open in IMG/M
3300012953|Ga0163179_10244508Not Available1395Open in IMG/M
3300012954|Ga0163111_10051614All Organisms → Viruses → Predicted Viral3204Open in IMG/M
3300017713|Ga0181391_1042193All Organisms → Viruses → Predicted Viral1091Open in IMG/M
3300017719|Ga0181390_1018014All Organisms → Viruses → Predicted Viral2346Open in IMG/M
3300017719|Ga0181390_1099957All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37777Open in IMG/M
3300017725|Ga0181398_1109099All Organisms → cellular organisms → Bacteria → Proteobacteria660Open in IMG/M
3300017751|Ga0187219_1034894All Organisms → Viruses → Predicted Viral1739Open in IMG/M
3300017759|Ga0181414_1009321All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED372711Open in IMG/M
3300017964|Ga0181589_10752542All Organisms → cellular organisms → Bacteria → Proteobacteria607Open in IMG/M
3300017967|Ga0181590_10036836All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED413934Open in IMG/M
3300017967|Ga0181590_10970614All Organisms → cellular organisms → Bacteria → Proteobacteria555Open in IMG/M
3300017986|Ga0181569_10877589All Organisms → cellular organisms → Bacteria → Proteobacteria584Open in IMG/M
3300017989|Ga0180432_10969450All Organisms → cellular organisms → Bacteria → Proteobacteria580Open in IMG/M
3300018415|Ga0181559_10492782All Organisms → cellular organisms → Bacteria → Proteobacteria667Open in IMG/M
3300018423|Ga0181593_10624567Not Available772Open in IMG/M
3300019459|Ga0181562_10320153All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37766Open in IMG/M
3300020175|Ga0206124_10082577All Organisms → Viruses → Predicted Viral1351Open in IMG/M
3300020382|Ga0211686_10093878All Organisms → Viruses → Predicted Viral1225Open in IMG/M
3300020400|Ga0211636_10180706Not Available825Open in IMG/M
3300020401|Ga0211617_10046900All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED371822Open in IMG/M
3300020428|Ga0211521_10110275All Organisms → Viruses → Predicted Viral1319Open in IMG/M
3300020447|Ga0211691_10158397Not Available860Open in IMG/M
3300020447|Ga0211691_10379805All Organisms → cellular organisms → Bacteria → Proteobacteria568Open in IMG/M
3300020457|Ga0211643_10087218All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED371541Open in IMG/M
3300020466|Ga0211714_10593876All Organisms → cellular organisms → Bacteria → Proteobacteria517Open in IMG/M
3300020469|Ga0211577_10893878All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37503Open in IMG/M
3300021958|Ga0222718_10473165All Organisms → cellular organisms → Bacteria → Proteobacteria611Open in IMG/M
3300021964|Ga0222719_10073837All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED372542Open in IMG/M
3300021964|Ga0222719_10572104All Organisms → cellular organisms → Bacteria → Proteobacteria663Open in IMG/M
3300022227|Ga0187827_10254448All Organisms → cellular organisms → Bacteria → Proteobacteria1156Open in IMG/M
3300022857|Ga0222653_1013977All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED371877Open in IMG/M
3300022905|Ga0255756_1184341Not Available777Open in IMG/M
3300023108|Ga0255784_10493432All Organisms → cellular organisms → Bacteria → Proteobacteria560Open in IMG/M
3300023110|Ga0255743_10521034All Organisms → cellular organisms → Bacteria → Proteobacteria558Open in IMG/M
3300023176|Ga0255772_10036915All Organisms → cellular organisms → Bacteria → Proteobacteria3563Open in IMG/M
3300023296|Ga0222664_1037559Not Available867Open in IMG/M
3300024297|Ga0228658_1028069All Organisms → Viruses → Predicted Viral1455Open in IMG/M
3300025137|Ga0209336_10098394Not Available830Open in IMG/M
3300025508|Ga0208148_1076608All Organisms → cellular organisms → Bacteria → Proteobacteria763Open in IMG/M
3300025759|Ga0208899_1096079All Organisms → Viruses → Predicted Viral1116Open in IMG/M
3300025803|Ga0208425_1052525All Organisms → Viruses → Predicted Viral1012Open in IMG/M
3300025821|Ga0209600_1108824Not Available818Open in IMG/M
3300026186|Ga0208128_1011546All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED372379Open in IMG/M
3300027686|Ga0209071_1039915All Organisms → Viruses → Predicted Viral1449Open in IMG/M
3300027752|Ga0209192_10013483All Organisms → Viruses → Predicted Viral4315Open in IMG/M
3300027779|Ga0209709_10035861All Organisms → Viruses → Predicted Viral3018Open in IMG/M
3300027838|Ga0209089_10349586Not Available830Open in IMG/M
3300027847|Ga0209402_10562873All Organisms → cellular organisms → Bacteria → Proteobacteria652Open in IMG/M
3300028115|Ga0233450_10342035Not Available617Open in IMG/M
3300028177|Ga0257122_1129946All Organisms → cellular organisms → Bacteria → Proteobacteria679Open in IMG/M
3300028190|Ga0257108_1148185All Organisms → cellular organisms → Bacteria → Proteobacteria682Open in IMG/M
3300028192|Ga0257107_1058119Not Available1187Open in IMG/M
3300028192|Ga0257107_1111419Not Available813Open in IMG/M
3300031510|Ga0308010_1011917All Organisms → Viruses → Predicted Viral3884Open in IMG/M
3300031519|Ga0307488_10105877All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED372042Open in IMG/M
3300031598|Ga0308019_10244254All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37682Open in IMG/M
3300031605|Ga0302132_10189932Not Available995Open in IMG/M
3300031623|Ga0302123_10293584Not Available785Open in IMG/M
3300031639|Ga0302117_10392597All Organisms → cellular organisms → Bacteria → Proteobacteria519Open in IMG/M
3300031757|Ga0315328_10177105Not Available1246Open in IMG/M
3300031800|Ga0310122_10442545All Organisms → cellular organisms → Bacteria → Proteobacteria548Open in IMG/M
3300031811|Ga0310125_10118062Not Available1391Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine23.00%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh12.00%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine11.00%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous6.00%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine6.00%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater6.00%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine5.00%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater3.00%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water3.00%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water3.00%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater2.00%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.00%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water2.00%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.00%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine1.00%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater1.00%
Background SeawaterEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater1.00%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine1.00%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.00%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine1.00%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.00%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine1.00%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater1.00%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.00%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.00%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface1.00%
Saline LakeEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake1.00%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment1.00%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000167Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 120mEnvironmentalOpen in IMG/M
3300001419Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline water (15 m)EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300005521Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255EnvironmentalOpen in IMG/M
3300005599Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF91AEnvironmentalOpen in IMG/M
3300005913Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK1EnvironmentalOpen in IMG/M
3300005971Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_SurfaceA_ad_5m_LV_AEnvironmentalOpen in IMG/M
3300006190Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNAEnvironmentalOpen in IMG/M
3300006327Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0125mEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006749Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300006990Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaGEnvironmentalOpen in IMG/M
3300007609Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MGEnvironmentalOpen in IMG/M
3300007756Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDBack_2015_DNA CLC_assemblyEnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300009438Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506EnvironmentalOpen in IMG/M
3300009449Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426EnvironmentalOpen in IMG/M
3300009472Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300009526Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300012919Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaGEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300012954Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaGEnvironmentalOpen in IMG/M
3300017713Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11EnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017725Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017759Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28EnvironmentalOpen in IMG/M
3300017964Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017986Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017989Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_2 metaGEnvironmentalOpen in IMG/M
3300018415Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018423Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019459Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020175Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2EnvironmentalOpen in IMG/M
3300020382Marine microbial communities from Tara Oceans - TARA_B100000780 (ERX556058-ERR599059)EnvironmentalOpen in IMG/M
3300020400Marine microbial communities from Tara Oceans - TARA_B100001115 (ERX555947-ERR598992)EnvironmentalOpen in IMG/M
3300020401Marine microbial communities from Tara Oceans - TARA_B100000212 (ERX555985-ERR599139)EnvironmentalOpen in IMG/M
3300020428Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)EnvironmentalOpen in IMG/M
3300020447Marine microbial communities from Tara Oceans - TARA_B100000745 (ERX556090-ERR599159)EnvironmentalOpen in IMG/M
3300020457Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)EnvironmentalOpen in IMG/M
3300020466Marine microbial communities from Tara Oceans - TARA_B100001540 (ERX556059-ERR598968)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022227Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300022857Saline water microbial communities from Ace Lake, Antarctica - #419EnvironmentalOpen in IMG/M
3300022905Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaGEnvironmentalOpen in IMG/M
3300023108Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaGEnvironmentalOpen in IMG/M
3300023110Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaGEnvironmentalOpen in IMG/M
3300023176Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaGEnvironmentalOpen in IMG/M
3300023296Saline water microbial communities from Ace Lake, Antarctica - #604EnvironmentalOpen in IMG/M
3300024297Seawater microbial communities from Monterey Bay, California, United States - 71DEnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025508Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025821Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421 (SPAdes)EnvironmentalOpen in IMG/M
3300026186Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF51B (SPAdes)EnvironmentalOpen in IMG/M
3300027686Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027752Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)EnvironmentalOpen in IMG/M
3300027779Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)EnvironmentalOpen in IMG/M
3300027838Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)EnvironmentalOpen in IMG/M
3300027847Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)EnvironmentalOpen in IMG/M
3300028115Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501CT (spades assembly)EnvironmentalOpen in IMG/M
3300028177Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_120EnvironmentalOpen in IMG/M
3300028190Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000mEnvironmentalOpen in IMG/M
3300028192Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500mEnvironmentalOpen in IMG/M
3300031510Marine microbial communities from water near the shore, Antarctic Ocean - #129EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031598Marine microbial communities from water near the shore, Antarctic Ocean - #284EnvironmentalOpen in IMG/M
3300031605Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1EnvironmentalOpen in IMG/M
3300031623Marine microbial communities from Western Arctic Ocean, Canada - CB21_32.1EnvironmentalOpen in IMG/M
3300031639Marine microbial communities from Western Arctic Ocean, Canada - AG5_32.2EnvironmentalOpen in IMG/M
3300031757Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315EnvironmentalOpen in IMG/M
3300031800Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051EnvironmentalOpen in IMG/M
3300031811Marine microbial communities from Western Arctic Ocean, Canada - CB11b_Tmax_Bot8EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1024096613300000101MarineKNMDASKFSKGVARIKENRDVKENVLKIKDGEYKED*
SI39nov09_120mDRAFT_103098113300000167MarineMDASKFSKGVARIKENRDVKENLLKIKDGDYKED*
JGI11705J14877_1006820723300001419Saline Water And SedimentNSALKNMDASKFSKGVARIKENRDIKQNVLKIRDGEYQED*
JGI24003J15210_1017671023300001460MarineFNSALKNMDASKFSKGVARIKENKDVKENVLKIKDGEYQED*
Ga0066862_1014939623300005521MarineHSSIKNMDAKKFARGVARIKENKDIKDNVLKIKDGEYKED*
Ga0066841_1006000423300005599MarineSIKNMDASKFSKGVARIKENKHIKDNVLKIKDGEYKED*
Ga0075108_1019526423300005913Saline LakeIKNMDASKFSRGVARIKENQDIKENVLKIKDGEYKED*
Ga0066370_1026081423300005971MarineKKFNSALKNMDASKFSKGVARIKENQDIKNNVLKIKDGEYKED*
Ga0075446_1005556523300006190MarineFNSAIKNMDASKFSKGVARIKENQDIKNNVLKIKDGEYKED*
Ga0068499_124763523300006327MarineIKNMDSNKFARGVARIKENKHIKDNVLKIKDGEYKED*
Ga0098035_123357913300006738MarineIKNMDASKFSKGVARIKENKHIKDNVLKIKEGEYKED*
Ga0098042_114120413300006749MarineNMDASKFTKGVARIKENRDVKENLLKIKDGEYKED*
Ga0098054_117727023300006789MarineFNSAIKNMDASKFSKGVARIKENKDIKDNILKIKDGEYKED*
Ga0070750_1037665723300006916AqueousALKNMDASKFSKGVARIKENRDVKENMLKIKDGEYKED*
Ga0098051_121007223300006924MarineKNMDASKFSKGVARIKENQDIKKNVLKIKDGEYKED*
Ga0098046_103389913300006990MarineNMDASRFSKGVARIKENRDVKENLLKIKDGEYKED*
Ga0102945_102424313300007609Pond WaterSAIKNMDASKFSKGVARIKENRDVKENLLKIRDGDYRED*
Ga0105664_103672723300007756Background SeawaterFHSSIKNMDSNKFARGVARIKENKHIKDNVLKIKDGDYKED*
Ga0099850_127092013300007960AqueousKKFNSALKNMDASKFSKGVARIKENRDIKENVLKIRDGEYQED*
Ga0075480_1012832123300008012AqueousAIKNMDASKFSKGVARIKENRDVKENLLKIKDGEYRED*
Ga0102960_125155913300009000Pond WaterKFNSAIKNMDASKFSRGVARIKENQDIKKNVLKIKDGEYRED*
Ga0102963_108199023300009001Pond WaterSALKNMDASKFSKGVARIKENRDIKENVLKIRDGEYQED*
Ga0114993_1113439013300009409MarineAIKNMDASKFSKGVARIKENQDIKNNVLKIKDGEYEED*
Ga0115545_120744823300009433Pelagic MarineALKNMDASKFSKGVARIKENRDVKQNLLKIKDGEYRED*
Ga0115559_106033513300009438Pelagic MarineEKKFNSALKNMDASKFSKGVARIKENRDVKENVLKIKDGEYKED*
Ga0115559_127133623300009438Pelagic MarineMDASKFSKGVARIKENQDIKANVLKIKDGEYKED*
Ga0115558_138440723300009449Pelagic MarineNSALKNMDASKFSKGVARIKENRDGKENVLKIKDGEYRED*
Ga0115554_105291013300009472Pelagic MarineSAIKNMDASKFSKGVARIKENRDVKENLLKIKDGEYKED*
Ga0115003_1016561523300009512MarineMDASKFSKGVARIKENQDIKNNVLKIKDGDYKED*
Ga0115004_1066179323300009526MarineFNSAIKNMDASKFSKGVARIKENQDIKKNVLKIKDGEYRED*
Ga0114999_1057060323300009786MarineFNSAIKNMDASKFSKGVARIKENQDIKNNVLKIKDGEYEED*
Ga0098061_103206513300010151MarineSAIKNMDASKFAKGVARIKENKDIKDNVLKIKDGDYKED*
Ga0129345_113056613300010297Freshwater To Marine Saline GradientKKFNSALKNMDASKFSKGVARIKENRDIKDNVLKTIDGEYQED*
Ga0114934_1045864213300011013Deep SubsurfaceMDASKFSKGVARIKENKDVKENVLKIKDGEYKDD*
Ga0160422_1004331113300012919SeawaterKNMDASKFTKGVARIKENKDIKNNVLKIKDGEYQEE*
Ga0160422_1044649613300012919SeawaterSAVKNMDASKFSKGVARIKENRDVKNNVLKIKDGEYKED*
Ga0163179_1001420813300012953SeawaterKFNSALKNMDASKFSKGVARIKENKDVKENVLKIKDGEYKED*
Ga0163179_1008363543300012953SeawaterNSAIKNMDASKFSKGVARIKENKDVKNNILKIKDGEYKED*
Ga0163179_1024450823300012953SeawaterAMDSKKFSKGVARIKEYKDIKENVLKTIDGEYKED*
Ga0163111_1005161413300012954Surface SeawaterNMDASKFSKGVARIKENKDVKNNVLKIKDGEYQED*
Ga0181391_104219313300017713SeawaterNMDASKFSKGVARIKENRDVKENVLKIKDGEYKED
Ga0181390_101801443300017719SeawaterFNSAIKNMDASKFSKGVARIKENKDVKENVLKIKDGEYKED
Ga0181390_109995713300017719SeawaterNSALKNMDASKFSKGVARIKENRDVKENVLKIKDGEYKED
Ga0181398_110909913300017725SeawaterKKFNSALKNMDASKFSKGVARIKENKDVKENVLKIKDGEYKED
Ga0187219_103489413300017751SeawaterNMDASKFSKGVARIKENQDIKKNVLKIKDGEYKED
Ga0181414_100932113300017759SeawaterNSAIKNMDASKFSKGVARIKENKDVKENVLKIKDGEYKED
Ga0181589_1075254213300017964Salt MarshALKNMDASKFSKGVARIKENRDIKQNVLKIRDGEYNED
Ga0181590_1003683613300017967Salt MarshEKKFNSALKNMDASKFSKGVARIKENRDIKQNVLKIRDGEYKED
Ga0181590_1097061413300017967Salt MarshEKKFNSALKNMDASKFSKGVARIKENRDIKQNVLKIRDGEYQED
Ga0181569_1087758923300017986Salt MarshSALKNMDASKFTKGVARLKENREIKQNVLKIKDGEYKED
Ga0180432_1096945013300017989Hypersaline Lake SedimentKKFNSALKNMDASKFSKGVARIKENKDIKQNVLKTIDGEYQED
Ga0181559_1049278213300018415Salt MarshKKFNSAIRNMDASKFSKSVARIKENKEVKNNLKTIDGEYKED
Ga0181593_1062456713300018423Salt MarshALKNMDASKFSKGVARIKENQDIKQNVLKIRDGEYQED
Ga0181562_1032015323300019459Salt MarshSALKNMDASKFSKGVARIKENRDIKNNVLKIKDGEYQED
Ga0206124_1008257713300020175SeawaterALKNMDASKFTKGVARIKENRDVKENVLKIKDGEYKED
Ga0211686_1009387823300020382MarineSAIKNMDASKFSKGVARIKENQDIKNNILKIKDGEYKED
Ga0211636_1018070623300020400MarineIKNMDASKFSKGVARIKENQDIKNNVLKIKDGEYKED
Ga0211617_1004690013300020401MarineSAIKNMDASKFSKGVARIKENRDVKENVLKIKDGEYKED
Ga0211521_1011027523300020428MarineKNMDASKFSKGVARIKENRDVKENVLKIKDGEYQED
Ga0211691_1015839723300020447MarineHSSIKNMDSNKFARGVARIKENKHIKDNVLKIKDGEYKED
Ga0211691_1037980523300020447MarineHSSIKNMDSNKFSKGVARIKENKDIKDNVLKIKDGEYKED
Ga0211643_1008721833300020457MarineALKNMDASKFSKGVARIKENKDVKNNVLKIKDGEYKED
Ga0211714_1059387623300020466MarineAIKNMDASKFSKGVNRIKENKDIKDNVLKIKDGEYKED
Ga0211577_1089387823300020469MarineLEKKFNSALKNMDASKFSKGVARIKENRDVKENVLKIKDGEYKED
Ga0222718_1047316513300021958Estuarine WaterSALKNMDASKFSKGVARIKENRDIKQNVLKTIDGEYQED
Ga0222719_1007383713300021964Estuarine WaterKKFNSALKNMDASKFSKGVARIKENRDIKQNVLKIKDGEYKED
Ga0222719_1057210423300021964Estuarine WaterEKKFNSALKNMDASKFSKGVARIKENKDIKQNVLKTVDGEYQED
Ga0187827_1025444833300022227SeawaterNMDASKFSKGVARIKENKHIKDNVLKIKDGEYKED
Ga0222653_101397733300022857Saline WaterAAIKNMDASKFSRGVARIKENQYIKKNVLKIKDGEYKED
Ga0255756_118434123300022905Salt MarshNMDASKFSKGVARIKENKDIKQNVLKIKDGEYKED
Ga0255784_1049343213300023108Salt MarshNSAIRNMDASKFSKSVARIKENKEVKNNLKTIDGEYKED
Ga0255743_1052103413300023110Salt MarshFNSALKNMDASKFSKGVARIKENKDIKQNVLKIKDGEYKED
Ga0255772_1003691513300023176Salt MarshLKNMDASKFSKGVARIKENKDIKQNVLKIRDGEYQED
Ga0222664_103755923300023296Saline WaterFNSAIKNMDASKFSRGVARIKENQDIKNNVLKIKDGEYRED
Ga0228658_102806933300024297SeawaterEKKFNSALKNMDASKFSKGVARIKENRDVKENVLKIKDGEYKED
Ga0209336_1009839413300025137MarineAIKNMDASKFSRGVARIKENQDIKNNVLKIKDGEYQED
Ga0208148_107660823300025508AqueousNSAIKNMDASKFSKGVARIKENRDVKENLLKIKDGEYKED
Ga0208899_109607913300025759AqueousLEKKFNSALKNMDASKFSKGVARIKENKDIKQNVLKIRDGEYQED
Ga0208425_105252523300025803AqueousKKFNSALKNMDASKFSKGVARIKENKDIKQNVLKIRDGEYQED
Ga0209600_110882413300025821Pelagic MarineIKNMDASKFSKGVARIKENRDVKENLLKIKDGEYKED
Ga0208128_101154613300026186MarineRFHSAIKNMDASKFSKGVARIKENKHIKDNVLKIKDGEYKED
Ga0209071_103991513300027686MarineAIKHMDASKFSKGVARIKENKDVKENVLKIKDGEYKED
Ga0209192_1001348353300027752MarineKFNSAIKNMDASKFSKGVARIKENQDIKNNVLKIKDGEYKED
Ga0209709_1003586143300027779MarineFNSAIKNMDASKFSKGVARIKENQDIKNNVLKIKDGEYKED
Ga0209089_1034958613300027838MarineAIKNMDASKFSKGVARIKENQDIKNNVLKIKDGEYEED
Ga0209402_1056287323300027847MarineSAIKNMDASKFSKGVARIKENQDIKNNVLKIKDGEYKED
Ga0233450_1034203513300028115Salt MarshEKKFNSALKNMDASKFSKGVARIRENRDVKENVLKIKDGEYKED
Ga0257122_112994613300028177MarineDTAFKLEKKFNSAIKNMDASKFSKGVARIKENRDVKENLLKIRDGDYRED
Ga0257108_114818523300028190MarineLEKRFHSSIKNMDAKKFSRGVARIKENKDIKDNILKIKDGEYKED
Ga0257107_105811913300028192MarineKNMDSNKFSKGVARIKENKDIKDNVLKIKDGEYKED
Ga0257107_111141913300028192MarineFHSSIKNMDSNKFSKGVARIKENKDIKDNVLKIKDGEYKED
Ga0308010_101191763300031510MarineKLEKRFNSAIKHMDASKFSKGVARIKENKDVKENVLKIKDGEYKED
Ga0307488_1010587733300031519Sackhole BrineKNMDASKFSRGVARIKENQDIKNNVLRIKDGEYKED
Ga0308019_1024425413300031598MarineSAIKHMDASKFSKGVARIKENKDVKENVLKIKDGEYKED
Ga0302132_1018993213300031605MarineNMDASKFSRGVARIKENQDIKDNVLKIKDGEYKED
Ga0302123_1029358413300031623MarineHSSIKNMDSNKFSKGVARIKENKDIKNNVLKIKDGEYKED
Ga0302117_1039259713300031639MarineNSAIKNMDASKFSRGVARIKENQDIKNNVLKIKDGEYRED
Ga0315328_1017710523300031757SeawaterKRFHSSIKNMDASKFSKGVARIKENKDIKNNVLKIKDGEYKED
Ga0310122_1044254523300031800MarineNMDGNKFTKGIARIKENKDVKDNVLKIKDGEYKED
Ga0310125_1011806213300031811MarineKRFHSSIKNMDSNKFARGVARIKENKHIKDNVLKIRDGEYKED

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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