NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F105539

Metagenome / Metatranscriptome Family F105539

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F105539
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 44 residues
Representative Sequence MDAALEDVQRQHPGAEVEEPFTRGYQRGREYYQRLCDQTKKAA
Number of Associated Samples 89
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 4.00 %
% of genes near scaffold ends (potentially truncated) 95.00 %
% of genes from short scaffolds (< 2000 bps) 90.00 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(23.000 % of family members)
Environment Ontology (ENVO) Unclassified
(35.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(56.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 49.30%    β-sheet: 0.00%    Coil/Unstructured: 50.70%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.64
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF01553Acyltransferase 40.00
PF12833HTH_18 8.00
PF03544TonB_C 7.00
PF03412Peptidase_C39 6.00
PF07244POTRA 3.00
PF04185Phosphoesterase 3.00
PF08245Mur_ligase_M 3.00
PF01546Peptidase_M20 2.00
PF02371Transposase_20 2.00
PF09335SNARE_assoc 2.00
PF13442Cytochrome_CBB3 2.00
PF00034Cytochrom_C 1.00
PF13483Lactamase_B_3 1.00
PF00903Glyoxalase 1.00
PF02590SPOUT_MTase 1.00
PF02875Mur_ligase_C 1.00
PF09970DUF2204 1.00
PF00882Zn_dep_PLPC 1.00
PF00884Sulfatase 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 7.00
COG3511Phospholipase CCell wall/membrane/envelope biogenesis [M] 3.00
COG0398Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 familyFunction unknown [S] 2.00
COG0586Membrane integrity protein DedA, putative transporter, DedA/Tvp38 familyCell wall/membrane/envelope biogenesis [M] 2.00
COG1238Uncharacterized membrane protein YqaA, VTT domainFunction unknown [S] 2.00
COG3547TransposaseMobilome: prophages, transposons [X] 2.00
COG157623S rRNA pseudoU1915 N3-methylase RlmHTranslation, ribosomal structure and biogenesis [J] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.00 %
UnclassifiedrootN/A5.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005364|Ga0070673_100909379All Organisms → cellular organisms → Bacteria → Acidobacteria816Open in IMG/M
3300005456|Ga0070678_100163415All Organisms → cellular organisms → Bacteria1806Open in IMG/M
3300005542|Ga0070732_10768315All Organisms → cellular organisms → Bacteria → Proteobacteria587Open in IMG/M
3300005542|Ga0070732_11006637All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium510Open in IMG/M
3300005568|Ga0066703_10541660All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300005598|Ga0066706_10990275All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium649Open in IMG/M
3300005602|Ga0070762_10542459All Organisms → cellular organisms → Bacteria → Acidobacteria767Open in IMG/M
3300005764|Ga0066903_100184962All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter3082Open in IMG/M
3300005764|Ga0066903_104756292All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria722Open in IMG/M
3300005952|Ga0080026_10027000All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1427Open in IMG/M
3300006028|Ga0070717_10576972All Organisms → cellular organisms → Bacteria → Acidobacteria1019Open in IMG/M
3300006028|Ga0070717_11631691All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium584Open in IMG/M
3300006059|Ga0075017_101618282All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300006176|Ga0070765_102006394All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium541Open in IMG/M
3300006893|Ga0073928_11143322All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium526Open in IMG/M
3300009177|Ga0105248_10303809All Organisms → cellular organisms → Bacteria → Acidobacteria1797Open in IMG/M
3300009523|Ga0116221_1322648All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus669Open in IMG/M
3300009553|Ga0105249_10460157All Organisms → cellular organisms → Bacteria → Acidobacteria1312Open in IMG/M
3300009792|Ga0126374_10798953All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium721Open in IMG/M
3300010048|Ga0126373_12919547All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300010358|Ga0126370_10793103All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117844Open in IMG/M
3300010361|Ga0126378_11086717All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117901Open in IMG/M
3300010361|Ga0126378_12492959All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium591Open in IMG/M
3300010937|Ga0137776_1793824All Organisms → cellular organisms → Bacteria → Acidobacteria1146Open in IMG/M
3300011271|Ga0137393_11585067All Organisms → cellular organisms → Bacteria → Acidobacteria544Open in IMG/M
3300012202|Ga0137363_11757528All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium513Open in IMG/M
3300012211|Ga0137377_11148311All Organisms → cellular organisms → Bacteria → Acidobacteria707Open in IMG/M
3300012354|Ga0137366_10459816All Organisms → cellular organisms → Bacteria → Acidobacteria922Open in IMG/M
3300012469|Ga0150984_110989912All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales782Open in IMG/M
3300012923|Ga0137359_10294346All Organisms → cellular organisms → Bacteria1446Open in IMG/M
3300014165|Ga0181523_10197260All Organisms → cellular organisms → Bacteria → Acidobacteria1167Open in IMG/M
3300014745|Ga0157377_10135738All Organisms → cellular organisms → Bacteria → Acidobacteria1507Open in IMG/M
3300016319|Ga0182033_10051574All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui2790Open in IMG/M
3300017948|Ga0187847_10291926Not Available891Open in IMG/M
3300017972|Ga0187781_10090411All Organisms → cellular organisms → Bacteria2119Open in IMG/M
3300017995|Ga0187816_10189446All Organisms → cellular organisms → Bacteria → Acidobacteria894Open in IMG/M
3300018006|Ga0187804_10105905All Organisms → cellular organisms → Bacteria → Acidobacteria1159Open in IMG/M
3300018058|Ga0187766_10847514All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300018062|Ga0187784_10013065All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis6706Open in IMG/M
3300018482|Ga0066669_10425799All Organisms → cellular organisms → Bacteria → Acidobacteria1132Open in IMG/M
3300020078|Ga0206352_10302100All Organisms → cellular organisms → Bacteria → Acidobacteria664Open in IMG/M
3300020579|Ga0210407_10375290Not Available1113Open in IMG/M
3300020580|Ga0210403_10022514All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis5031Open in IMG/M
3300020581|Ga0210399_10088246All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2524Open in IMG/M
3300020582|Ga0210395_11106489All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium585Open in IMG/M
3300020583|Ga0210401_10230557All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1710Open in IMG/M
3300021168|Ga0210406_11055083All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium601Open in IMG/M
3300021178|Ga0210408_11100297All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium611Open in IMG/M
3300021180|Ga0210396_10602355All Organisms → cellular organisms → Bacteria955Open in IMG/M
3300021181|Ga0210388_10328944Not Available1343Open in IMG/M
3300021401|Ga0210393_10691576All Organisms → cellular organisms → Bacteria → Acidobacteria832Open in IMG/M
3300021404|Ga0210389_11525845All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium507Open in IMG/M
3300021406|Ga0210386_10086546All Organisms → cellular organisms → Bacteria → Acidobacteria2548Open in IMG/M
3300021407|Ga0210383_10152718All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1963Open in IMG/M
3300021432|Ga0210384_10843062All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300021432|Ga0210384_11184694All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium668Open in IMG/M
3300021478|Ga0210402_10256252All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1616Open in IMG/M
3300021478|Ga0210402_10865237All Organisms → cellular organisms → Bacteria → Acidobacteria830Open in IMG/M
3300021559|Ga0210409_10720179All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus869Open in IMG/M
3300022557|Ga0212123_10086719All Organisms → cellular organisms → Bacteria2614Open in IMG/M
3300022557|Ga0212123_10432737All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300022724|Ga0242665_10261332All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium592Open in IMG/M
3300025711|Ga0207696_1175035All Organisms → cellular organisms → Bacteria → Acidobacteria568Open in IMG/M
3300026329|Ga0209375_1241122All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium616Open in IMG/M
3300026334|Ga0209377_1326890All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium514Open in IMG/M
3300026552|Ga0209577_10176218All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1661Open in IMG/M
3300027070|Ga0208365_1019432All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium871Open in IMG/M
3300027073|Ga0208366_1022270All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium697Open in IMG/M
3300027502|Ga0209622_1110574All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium504Open in IMG/M
3300027575|Ga0209525_1082260All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium770Open in IMG/M
3300027633|Ga0208988_1093819All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300027842|Ga0209580_10694709All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium502Open in IMG/M
3300027884|Ga0209275_10073558All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1697Open in IMG/M
3300027884|Ga0209275_10266087Not Available944Open in IMG/M
3300028379|Ga0268266_11263086Not Available714Open in IMG/M
3300028906|Ga0308309_10627553All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300028906|Ga0308309_11616125All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium551Open in IMG/M
3300029636|Ga0222749_10307911All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium821Open in IMG/M
3300029951|Ga0311371_10721756All Organisms → cellular organisms → Bacteria → Acidobacteria1247Open in IMG/M
3300030053|Ga0302177_10097972All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1700Open in IMG/M
3300030878|Ga0265770_1148208All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium513Open in IMG/M
3300031057|Ga0170834_101009011All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium582Open in IMG/M
3300031128|Ga0170823_13387888All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium527Open in IMG/M
3300031469|Ga0170819_15949661All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium556Open in IMG/M
3300031573|Ga0310915_11235482All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300031668|Ga0318542_10408596All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117701Open in IMG/M
3300031715|Ga0307476_11148313All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium569Open in IMG/M
3300031718|Ga0307474_10614512All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117857Open in IMG/M
3300031720|Ga0307469_11632072All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium620Open in IMG/M
3300031753|Ga0307477_10072642All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2379Open in IMG/M
3300031754|Ga0307475_10024980All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4257Open in IMG/M
3300031754|Ga0307475_11395017All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae540Open in IMG/M
3300031833|Ga0310917_10937218All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300031954|Ga0306926_10333533All Organisms → cellular organisms → Bacteria → Acidobacteria1876Open in IMG/M
3300031954|Ga0306926_12585519All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium554Open in IMG/M
3300031962|Ga0307479_11720141All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium580Open in IMG/M
3300032174|Ga0307470_11234135All Organisms → cellular organisms → Bacteria → Acidobacteria609Open in IMG/M
3300032515|Ga0348332_10334023All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium871Open in IMG/M
3300032756|Ga0315742_11557950All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium710Open in IMG/M
3300032896|Ga0335075_10941858All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium785Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil23.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil8.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil6.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.00%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil4.00%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring3.00%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.00%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.00%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.00%
SedimentEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment1.00%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.00%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.00%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil1.00%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005952Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009523Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaGEnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010937Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139EnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025711Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027070Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)EnvironmentalOpen in IMG/M
3300027073Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF010 (SPAdes)EnvironmentalOpen in IMG/M
3300027502Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027575Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027633Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030053Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2EnvironmentalOpen in IMG/M
3300030878Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032756Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined AssemblyEnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0070673_10090937923300005364Switchgrass RhizosphereFDQVSAEMSATLEDVQRQYPNAKVEEPFTRGYQRGREYYQQLCDESKAA*
Ga0070678_10016341543300005456Miscanthus RhizosphereMNSSLEDVQKQYPNVDVSDAFLAGYQRGRDYYQRVCDESKAA*
Ga0070732_1076831513300005542Surface SoilDQVSAAMDAALEDVKQQYPGAKVEEPFLRGYQRGRDHYQQLCDEHRQAA*
Ga0070732_1100663723300005542Surface SoilFDQVSAEMDAALEDVKGRYPNSDVEEPFLQGYRRGREHYQQLCDENRRAA*
Ga0066703_1054166013300005568SoilFDQISGEMNAALDDVKAQYPGANVEEPFLAGYQRGREHYQQLCDETEQLVRE*
Ga0066706_1099027523300005598SoilEFDQVSGEMNAALEDVQRQYPGKQVEEPFTRGFRRGREHYQQLCDEQSRAA*
Ga0070762_1054245923300005602SoilVEFDQVSGEMNAALEDAQREHPGVQLEAAFTRGYQRGRDYYQQRCDETGKAA*
Ga0066903_10018496243300005764Tropical Forest SoilEDVEHRFPGKDVEEPFTRGYQRGREHYQQLCDEDTKAA*
Ga0066903_10475629213300005764Tropical Forest SoilMEFDQVSAAMDAALEDVKQQYPGSNVEEPFVRGYQRGREHYQQLCDEHRQAA*
Ga0080026_1002700033300005952Permafrost SoilRQHPGEDVEEAFTRGYQRGRDYYQQLCDENKRAA*
Ga0070717_1057697223300006028Corn, Switchgrass And Miscanthus RhizosphereDQVSAEMEATLEDVRRQFPGENVEEPFTRGYQRGREHYQKLCDEAPKAA*
Ga0070717_1163169113300006028Corn, Switchgrass And Miscanthus RhizosphereFDQISAEMDAALQDVERQFPGKDVEEPFIRGYQRGREHYQQLCDEGTKAA*
Ga0075017_10161828223300006059WatershedsLEDVKRQYPGHNVEEPFTQGYQRGREHYQQLCDEGKRAA*
Ga0070765_10200639413300006176SoilQHQYPGIDLEEAFTTGYQRGREYYQRVCDESQKAA*
Ga0073928_1114332213300006893Iron-Sulfur Acid SpringCMEFDQVSGEMNAALEDVQRENPGVDVEEAFTRGYQRGRDHYQQLCDQDKKAA*
Ga0105248_1030380923300009177Switchgrass RhizosphereLEDVQRQYPNAKVEEPFTRGYQRGREYYQQLCDESKAA*
Ga0116221_132264813300009523Peatlands SoilVSAAMDAALEDVQREHPGAEVEEAFTRGYQRGREYYQRLCDETSKAA*
Ga0105249_1046015713300009553Switchgrass RhizosphereDVQRQYPNAKVEEPFTRGYQRGREYYQQLCDESKAA*
Ga0126374_1079895323300009792Tropical Forest SoilLEDIEHRFPGKDVEEPFTRGYQRGREHYQQLCDEGSKAA*
Ga0126373_1291954723300010048Tropical Forest SoilDVQRRFPGKNVEEPFTRGYQRGREHYQQLCDENKRAA*
Ga0126370_1079310313300010358Tropical Forest SoilMDAVLEDVKRQHPGASVEGPFTRGYQRGREYYQRTCDENPKAA*
Ga0126378_1108671723300010361Tropical Forest SoilFDQISAEMDAALEDVERQFPGKDVEEPFIRGYQRGREHYQQLCDEGTKAA*
Ga0126378_1249295913300010361Tropical Forest SoilEFDQVSTAMNSALEDVERQYPGEQVEEPFTRGYRRGREHYQSLCDEGERKAS*
Ga0137776_179382433300010937SedimentSAAMDAALEDVQREHPGKEVEEAFTRGYQRGREYYQQRCEETKKAA*
Ga0137393_1158506713300011271Vadose Zone SoilLEDLKRQYPDVDVAEPYTRGYQRGRSYYQQLCQGSKAA*
Ga0137363_1175752823300012202Vadose Zone SoilSDLEELERQHPGAEVADPFTRGYQRGREYYQRLCEEEKAA*
Ga0137377_1114831123300012211Vadose Zone SoilEFDQVSSAMSAALEDVQRQYPGAEVEEAFTQGYQRGRDYYQRLCDENKRAA*
Ga0137366_1045981623300012354Vadose Zone SoilFDQVSAAMTAALEDVQRDHPGKDVEAAFIRGYERGREHYQRLCDEGKRAA*
Ga0150984_11098991233300012469Avena Fatua RhizosphereEMNAALEDAQEQYPGANVEEPFTRGYRRGREHYQTLCEQSKAA*
Ga0137359_1029434613300012923Vadose Zone SoilDVKAQYPGANVEEPFLAGYQRGREHYQQLCDETEQLVRE*
Ga0181523_1019726033300014165BogMDAALEDVQRQHPGAEVEEPFTRGYQRGREYYQRLCDQTKKAA*
Ga0157377_1013573813300014745Miscanthus RhizosphereKEFDQVSAEMSATLEDVQRQYPNAKVEEPFTRGYQRGREYYQQLCDESKAA*
Ga0182033_1005157413300016319SoilAEMDSQLEDLERQYPDTDIEEPFTRGYRRGREYFQALCDERAA
Ga0187847_1029192613300017948PeatlandSRLEDLQRQYPKLDVEKPFTRGYQRGRDYYQRLCNESKAA
Ga0187781_1009041113300017972Tropical PeatlandKLEDLEEQYPGAQIEEPFTRGYQRGREHFQALCDERAA
Ga0187816_1018944613300017995Freshwater SedimentVQQKYPGTAVEEPFTRGYQRGREHYQQLCDEKSKAA
Ga0187804_1010590523300018006Freshwater SedimentFDQVSGEMNAALEDVQRQFPGAQVEEPFTRGYQRGREHYQRLCDENKAA
Ga0187766_1084751423300018058Tropical PeatlandMDSRLEDLERQYPDTDIEEPFTRGYRRGREYFQALCDERAA
Ga0187784_10013065103300018062Tropical PeatlandDQVSAEMDATLEDAQERFPGVDIEEPFTRGYQRGREHYQQLCDERNKAA
Ga0066669_1042579923300018482Grasslands SoilMAATLEDVQRQYPDAKVEEPFTRGYQRGRKYYQQLCDESKAA
Ga0206352_1030210013300020078Corn, Switchgrass And Miscanthus RhizosphereATLEDVQRQYPNAKVEEPFTRGYQRGREYYQQLCDESKAA
Ga0210407_1037529023300020579SoilAQREHPGVQLEAAFTRGYQRGRDYYQQRCDETGKAA
Ga0210403_1002251463300020580SoilDAALEDVQREHPGAEVEEAFTRGYQRGREYYQRLCDETRKAA
Ga0210399_1008824633300020581SoilLEDVQSRYPGKQVEEPFTRGYRRGREHYQQLCDENKKAA
Ga0210395_1110648923300020582SoilRCVEFDQVSGEMNAALEDAQRQHPGVQLEAAFTRGYQRGRDYYQQRCDETGKAA
Ga0210401_1023055723300020583SoilCLEFDQVSGEMNAALEDLQREYPGVDLEEPFTTGYQRGREYYQRVCDESPKAA
Ga0210406_1105508323300021168SoilFDQVSGAMNAALEDVQRQHPGAEVESAFTRGYQRGREYYQHLCDDKKAA
Ga0210408_1110029723300021178SoilQRQNPGVEVEEAFTRGYQRGRDYYQQLCDENQQAA
Ga0210396_1060235513300021180SoilVALDDVKAQYPGANVEEPFLAGYQRGREHYQQLCDETEQLVKE
Ga0210388_1032894413300021181SoilMESNLKELQKQYPGVDLEEAYTRGYERGREYYQRLCDERKAA
Ga0210393_1069157623300021401SoilVSGEMNAALEDVQAQYPGADVEEPFSRGYQRGREHYQKLCDDKSQAA
Ga0210389_1152584513300021404SoilEFDQVSGEMNAALEDVQKQYPDAKVEEPFTRGYQRGREHYQQLCDEGKKAA
Ga0210386_1008654643300021406SoilALEDVQREHPGADVEEPFTHGYQRGREYYQRRCDETSKAA
Ga0210383_1015271813300021407SoilEDVQRQYPGAEVEEAFTRGYQRGREHYQQLCDQNSKAA
Ga0210384_1084306213300021432SoilNAALDDVKAQYPGANVEEPFLAGYQRGREHYQQLCDETEQLVKE
Ga0210384_1118469423300021432SoilSGAMNAALEDVQRQHPGEDGEEAFTRGYQRGRDYYQQLCDENKRAA
Ga0210402_1025625213300021478SoilDVQRQHPGEDVEEAFTRGYQRGRDYYQQLCDENKRAA
Ga0210402_1086523713300021478SoilVQKEYPDADVEGPFVRGYQRGREHYQQLCDDTKKAA
Ga0210409_1072017923300021559SoilLEDVQREHPDAEVEEAFTRGYQRGREYYQRLCDETRKAA
Ga0212123_1008671943300022557Iron-Sulfur Acid SpringVSGEMNAALEDVQRENPGMNVEEAFTRGYQRGRDHYQQLCDEKKAA
Ga0212123_1043273713300022557Iron-Sulfur Acid SpringNAALEDAQREHPGVQLEAAFTRGYQRGRDYYQQRCDETGKAA
Ga0242665_1026133213300022724SoilTRCMEFDQVSGEMNAALEDVQSRYPGKQVEEPFTQGYRRGREHYQQLCDERSRAA
Ga0207696_117503523300025711Switchgrass RhizosphereEDVQKQYPNVDVSDAFLAGYQRGRDYYQRVCDESKAA
Ga0209375_124112213300026329SoilVSGEMNAALEDVQRQYPGKQVEEPFTRGFRRGREHYQQLCDEQSRAA
Ga0209377_132689023300026334SoilQVSGEMNAALEDVQRQYPGKQVEEPFTRGFRRGREHYQQLCDEQSRAA
Ga0209577_1017621833300026552SoilDQVSAEMDASLEDVRRQYPGENVDEPFTRGYQRGREHYQKLCDEAPKAA
Ga0208365_101943223300027070Forest SoilAEMANRVEELEREYPNASVEGPFTRGYQRGREYYQRLCDECRAA
Ga0208366_102227013300027073Forest SoilRVEELEREYPGANVEGPFTRGYQRGREYYQRLCDESRAA
Ga0209622_111057413300027502Forest SoilDVQREHPGVDVEEAFTRGYQRGRDYYQQLCNENKQAA
Ga0209525_108226013300027575Forest SoilFDQVSGAMNAALEDVQRQHPGEDVEEAFTRGYQRGRDYYQQLCDENKRAA
Ga0208988_109381913300027633Forest SoilQISGEMNAALDDVKAQYPGANVEEPFLAGYQRGREHYQQLCDETEQLVRE
Ga0209580_1069470913300027842Surface SoilSGEMNAALEDVQSRYPGKQVEEPFTQGYRRGREHYQQLCDERSRAA
Ga0209275_1007355833300027884SoilQVSAAMDAALEEVQREHPGGDVEEPFTRGYQRGREYYQRICDETSKAA
Ga0209275_1026608713300027884SoilMNAALEDAQREHPGVQLEAAFTRGYQRGRDYYQQRCDETGKAA
Ga0268266_1126308613300028379Switchgrass RhizosphereMNSRLEEVQEQHPGADVSEPFLKGYQRGRDYYQRICEESKAA
Ga0308309_1062755313300028906SoilDVKAQYPGANVEEPFLAGYQRGREHYQQLCDETEQLVKE
Ga0308309_1161612523300028906SoilQHQYPGIDLEEAFTTGYQRGREYYQRVCDESQKAA
Ga0222749_1030791113300029636SoilSAAMNAALEEAQRENPGADVEEAFTRGYQRGREHYQQLCDETKKAA
Ga0311371_1072175633300029951PalsaASGQMNAALEDAQRQHPGVQLEEAFTRGYQRGRDHYQQRCNEAGKAA
Ga0302177_1009797223300030053PalsaCLEFDQVSGEMNAALEDVQRQHPGVDLEEPFTTGYQRGREYYQQVCDEGQKAV
Ga0265770_114820813300030878SoilEDVQRQHPGAEVEPAFTRGYQRGREYYQHLCDDKKAA
Ga0170834_10100901113300031057Forest SoilALEDLQREYPGKDVEAAFTRGYERGREHYQRLCDESKKAA
Ga0170823_1338788823300031128Forest SoilAAMDAALEDVQRQHPGKEVEAAFTRGYQRGREHYQQLCDETKKAA
Ga0170819_1594966123300031469Forest SoilGAMNAALEDVQREHPGAQVEEPFTRGYERGREYYQRLCDRENAA
Ga0310915_1123548223300031573SoilMEFDQVSAEMDSQLEDLERQYPDTDIEEPFTRGYRRGREYFQALCDERAA
Ga0318542_1040859613300031668SoilDAALEDVERQFPGKDVEEPFIRGYQRGREHYQQLCDEGTKAA
Ga0307476_1114831313300031715Hardwood Forest SoilEMESNLEDLQKQYPNRDVAEPYTRGYRRGRDYYQRLCDESKAA
Ga0307474_1061451213300031718Hardwood Forest SoilQRKYPGVDLEEAFTTGYQRGREYYQRVCDEGQKAA
Ga0307469_1163207223300031720Hardwood Forest SoilQVSAAMDAALQDVQARYPGKDVEEPFTRGYSRGREHYQQLCDEKKTAA
Ga0307477_1007264213300031753Hardwood Forest SoilFDQVSGEMNAALEDVKREHPGEDVEEAFLRGYERGRDYYQQLCDEKKAA
Ga0307475_1002498063300031754Hardwood Forest SoilNAALDDVKAHYPGANVEEPFLAGYQRGREHYQQLCDETEQLVKE
Ga0307475_1139501723300031754Hardwood Forest SoilLGEMNAALEDVKAQYPGVNVEEPFLAGYQRGREHYQQLCDETEKLVSD
Ga0310917_1093721823300031833SoilDLERQYPDSDIEEPFTRGYRRGREYFQALCDERAA
Ga0306926_1033353333300031954SoilEMDAALEEVKRQYPGRDVEEPFLQGYQRGREHYQQLCDEDRKAA
Ga0306926_1258551913300031954SoilLEDVERQFPGKDVEEPFIRGYQRGREHYQQLCDEGTKAA
Ga0307479_1172014123300031962Hardwood Forest SoilVQRQYPGKQVEEPFTRGYRRGREHYQQLCDENKKAA
Ga0307470_1123413513300032174Hardwood Forest SoilEMNSSLEDVQKQYPNVDVSDAFLAGYQRGRDYYQRVCDESKAA
Ga0348332_1033402333300032515Plant LitterAEMTSKLEDLQREYPGVKIEEPYTRGYQRGREYYQRLCDEKKAA
Ga0315742_1155795023300032756Forest SoilEDVQRENPGMNVEEAFTRGYQRGRDHYQQLCDEKKAA
Ga0335075_1094185823300032896SoilDLEDVKRQYPGRNVEEPFLRGYQRGREHYQQLCDESKKAA

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.