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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F105578 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 100 |
| Average Sequence Length | 60 residues |
| Representative Sequence | DHDTILYTLTVVDPKAYTKPIEGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAAKPSK |
| Number of Associated Samples | 82 |
| Number of Associated Scaffolds | 100 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 0.00 % |
| % of genes near scaffold ends (potentially truncated) | 1.00 % |
| % of genes from short scaffolds (< 2000 bps) | 1.00 % |
| Associated GOLD sequencing projects | 76 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.27 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (99.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (35.000 % of family members) |
| Environment Ontology (ENVO) | Unclassified (36.000 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (42.000 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 16.48% β-sheet: 18.68% Coil/Unstructured: 64.84% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.27 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 100 Family Scaffolds |
|---|---|---|
| PF07676 | PD40 | 6.00 |
| PF00248 | Aldo_ket_red | 4.00 |
| PF01145 | Band_7 | 2.00 |
| PF00903 | Glyoxalase | 2.00 |
| PF00578 | AhpC-TSA | 2.00 |
| PF00080 | Sod_Cu | 2.00 |
| PF13620 | CarboxypepD_reg | 2.00 |
| PF13442 | Cytochrome_CBB3 | 2.00 |
| PF01925 | TauE | 1.00 |
| PF11008 | DUF2846 | 1.00 |
| PF02922 | CBM_48 | 1.00 |
| PF13545 | HTH_Crp_2 | 1.00 |
| PF11737 | DUF3300 | 1.00 |
| PF01494 | FAD_binding_3 | 1.00 |
| PF00266 | Aminotran_5 | 1.00 |
| PF01717 | Meth_synt_2 | 1.00 |
| PF03352 | Adenine_glyco | 1.00 |
| PF12681 | Glyoxalase_2 | 1.00 |
| PF13709 | DUF4159 | 1.00 |
| PF12838 | Fer4_7 | 1.00 |
| PF07690 | MFS_1 | 1.00 |
| PF01425 | Amidase | 1.00 |
| COG ID | Name | Functional Category | % Frequency in 100 Family Scaffolds |
|---|---|---|---|
| COG0654 | 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases | Energy production and conversion [C] | 2.00 |
| COG2032 | Cu/Zn superoxide dismutase | Inorganic ion transport and metabolism [P] | 2.00 |
| COG0154 | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase | Translation, ribosomal structure and biogenesis [J] | 1.00 |
| COG0578 | Glycerol-3-phosphate dehydrogenase | Energy production and conversion [C] | 1.00 |
| COG0620 | Methionine synthase II (cobalamin-independent) | Amino acid transport and metabolism [E] | 1.00 |
| COG0644 | Dehydrogenase (flavoprotein) | Energy production and conversion [C] | 1.00 |
| COG0665 | Glycine/D-amino acid oxidase (deaminating) | Amino acid transport and metabolism [E] | 1.00 |
| COG0730 | Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family | Inorganic ion transport and metabolism [P] | 1.00 |
| COG2818 | 3-methyladenine DNA glycosylase Tag | Replication, recombination and repair [L] | 1.00 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 99.00 % |
| All Organisms | root | All Organisms | 1.00 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300028047|Ga0209526_10279977 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1134 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 35.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 21.00% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 6.00% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 6.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 3.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 3.00% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 3.00% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 3.00% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 2.00% |
| Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 2.00% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.00% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 2.00% |
| Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 1.00% |
| Iron-Sulfur Acid Spring | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring | 1.00% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 1.00% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.00% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil | 1.00% |
| Permafrost | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost | 1.00% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 1.00% |
| Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 1.00% |
| Biofilm | Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm | 1.00% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 1.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.00% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300002245 | Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027) | Environmental | Open in IMG/M |
| 3300002907 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm | Environmental | Open in IMG/M |
| 3300005167 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 | Environmental | Open in IMG/M |
| 3300005534 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 | Environmental | Open in IMG/M |
| 3300005921 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 | Environmental | Open in IMG/M |
| 3300006176 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 | Environmental | Open in IMG/M |
| 3300006893 | Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG | Environmental | Open in IMG/M |
| 3300007255 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 | Environmental | Open in IMG/M |
| 3300007258 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 | Environmental | Open in IMG/M |
| 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Environmental | Open in IMG/M |
| 3300009088 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG | Environmental | Open in IMG/M |
| 3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
| 3300010401 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1 | Environmental | Open in IMG/M |
| 3300011269 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG | Environmental | Open in IMG/M |
| 3300012203 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG | Environmental | Open in IMG/M |
| 3300012205 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG | Environmental | Open in IMG/M |
| 3300012208 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG | Environmental | Open in IMG/M |
| 3300012211 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG | Environmental | Open in IMG/M |
| 3300012351 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG | Environmental | Open in IMG/M |
| 3300012361 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG | Environmental | Open in IMG/M |
| 3300012363 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG | Environmental | Open in IMG/M |
| 3300012917 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG | Environmental | Open in IMG/M |
| 3300012922 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG | Environmental | Open in IMG/M |
| 3300012923 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG | Environmental | Open in IMG/M |
| 3300012924 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012925 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012927 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012929 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
| 3300012986 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG | Environmental | Open in IMG/M |
| 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Host-Associated | Open in IMG/M |
| 3300014158 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG | Environmental | Open in IMG/M |
| 3300014501 | Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300015241 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300015245 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300015264 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300017823 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3 | Environmental | Open in IMG/M |
| 3300017943 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4 | Environmental | Open in IMG/M |
| 3300017955 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2 | Environmental | Open in IMG/M |
| 3300018012 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5 | Environmental | Open in IMG/M |
| 3300018468 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111 | Environmental | Open in IMG/M |
| 3300020170 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300020199 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300020580 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M | Environmental | Open in IMG/M |
| 3300021171 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M | Environmental | Open in IMG/M |
| 3300021178 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M | Environmental | Open in IMG/M |
| 3300021180 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O | Environmental | Open in IMG/M |
| 3300021401 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O | Environmental | Open in IMG/M |
| 3300021420 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M | Environmental | Open in IMG/M |
| 3300021432 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M | Environmental | Open in IMG/M |
| 3300021476 | Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2) | Environmental | Open in IMG/M |
| 3300021478 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M | Environmental | Open in IMG/M |
| 3300021479 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M | Environmental | Open in IMG/M |
| 3300021559 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M | Environmental | Open in IMG/M |
| 3300022722 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300024227 | Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 | Host-Associated | Open in IMG/M |
| 3300024330 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
| 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300026291 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes) | Environmental | Open in IMG/M |
| 3300026320 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes) | Environmental | Open in IMG/M |
| 3300026333 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes) | Environmental | Open in IMG/M |
| 3300026552 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes) | Environmental | Open in IMG/M |
| 3300026557 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal | Environmental | Open in IMG/M |
| 3300027570 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027660 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027842 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027894 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes) | Environmental | Open in IMG/M |
| 3300027905 | Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes) | Environmental | Open in IMG/M |
| 3300027908 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes) | Environmental | Open in IMG/M |
| 3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300028536 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300030862 | Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031234 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2 | Environmental | Open in IMG/M |
| 3300031679 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23 | Environmental | Open in IMG/M |
| 3300031715 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05 | Environmental | Open in IMG/M |
| 3300031833 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178 | Environmental | Open in IMG/M |
| 3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
| 3300032052 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19 | Environmental | Open in IMG/M |
| 3300032063 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17 | Environmental | Open in IMG/M |
| 3300032783 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3 | Environmental | Open in IMG/M |
| 3300033480 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B | Environmental | Open in IMG/M |
| 3300033486 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGIcombinedJ26739_1008998601 | 3300002245 | Forest Soil | DTIVYDITITDPMAYTKPIVAPQKTLKLKPHGEIDELPCVWSEENEFTQRIRNPATPKPAK* |
| JGIcombinedJ26739_1009124571 | 3300002245 | Forest Soil | HDTILYTLTVVDPKAYTKPIEGRHVTLKLRPHQEIEELPCVWSEENAFTRRIREPAAANPTK* |
| JGI25613J43889_100815352 | 3300002907 | Grasslands Soil | KPIEGRHVTFKLKPRVEIEELPCVWSEENAFTKRIREPAAAKPAK* |
| Ga0066672_107731831 | 3300005167 | Soil | MRVTERYQRVDHDTIRYNIRVEDPKAYTKPIIGPERAMKLRPGVQINELPCVWSEENSFTKRIREPAVRKPN* |
| Ga0070735_107030151 | 3300005534 | Surface Soil | RTDRDTVVYDMTIFDPIAYTKPIVGPQRILKLKPGEEIGEYPCVYTEEHEFTQRIREPATPKQTK* |
| Ga0070766_112568931 | 3300005921 | Soil | VTDPMAYTKPIVAPQRTMKLRPHEEIEEQPCVWSQENEFAKRIREPATRNPTK* |
| Ga0070765_1004049351 | 3300006176 | Soil | HSEDMRVTERYQRVDRNTILYNIRVDDPKAYTKPIIGPGRMMKLRSGVEIGELPCVWSEENSFTKRIREPAVGKPNR* |
| Ga0073928_107071431 | 3300006893 | Iron-Sulfur Acid Spring | RNTIVYNIRVDDPKAYTKPVVGPERAMKLRPGVQIGELPCVWSEENSFTKRIREPAVGKPNR* |
| Ga0099791_100268535 | 3300007255 | Vadose Zone Soil | MAYTKPIEGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAAKTTK* |
| Ga0099793_104712291 | 3300007258 | Vadose Zone Soil | DHDTILYTLTVVDPKAYTKPIEGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAAKPSK* |
| Ga0099794_107006941 | 3300007265 | Vadose Zone Soil | KPIEGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAAKATK* |
| Ga0099830_115572531 | 3300009088 | Vadose Zone Soil | VTERYHRVDHDTILYDMTVTDPMAYTKPIVAPQKTMKLKPHEQIEEQPCVWSQENEFAKRIREPATSNPAK* |
| Ga0126376_107130222 | 3300010359 | Tropical Forest Soil | KPIVGPQRTMKLRPKEEIEELVCVWSDETAFAKRIREPAAAKRK* |
| Ga0134121_128108642 | 3300010401 | Terrestrial Soil | VDSNTIRYNITVEDTKAYSKPIVAPERIMKLRPGAQIEELPCVWSEENAFTRRIRKPAVGPPNR* |
| Ga0137392_108783033 | 3300011269 | Vadose Zone Soil | TRPIIGPERIMKLRPGVEIGELPCVWSEENSFTKGIREPAVGKPNR* |
| Ga0137399_109170372 | 3300012203 | Vadose Zone Soil | HDTILYTLTVVDPMAYTKPIEGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAAKTTK* |
| Ga0137399_113088742 | 3300012203 | Vadose Zone Soil | VDPMAYTKPIEGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAAKTTK* |
| Ga0137362_100746892 | 3300012205 | Vadose Zone Soil | PMAYTKPIEGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAAKTTK* |
| Ga0137376_114257181 | 3300012208 | Vadose Zone Soil | ITERYQRVDHDTILYTLTVVDPKAYTKPIEGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAAKATK* |
| Ga0137377_100248311 | 3300012211 | Vadose Zone Soil | MAYTKPIEGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAAKATK* |
| Ga0137386_107959241 | 3300012351 | Vadose Zone Soil | YQRVDHDTILYTLTVVDPKAYTKPIEGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAAKTTR* |
| Ga0137360_100482611 | 3300012361 | Vadose Zone Soil | KPIEGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAKTTK* |
| Ga0137390_105082341 | 3300012363 | Vadose Zone Soil | DTILYDMTVTDPMAYTKPIVAPQKTMKLKPHEQIEEQPCVWSQENEFAKRIREPATSNPAK* |
| Ga0137395_100263452 | 3300012917 | Vadose Zone Soil | PHTEDMRITERYQRVDHDTILYSLTVVDPMAYTKPIEGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAAKTAK* |
| Ga0137394_100643922 | 3300012922 | Vadose Zone Soil | ILYTLTVVDPMAYTKPIEGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAAKTTK* |
| Ga0137359_109044021 | 3300012923 | Vadose Zone Soil | VVDPKAYTKPIDGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAAKTTK* |
| Ga0137413_101756751 | 3300012924 | Vadose Zone Soil | AKPIVGPQRIMKLKPGGEIDELPCVWSEENAFTHRIREPAASNPAK* |
| Ga0137419_109711312 | 3300012925 | Vadose Zone Soil | RYQRVDHDTILYTLTVVDPKAYTKPIEGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAAKTTK* |
| Ga0137419_115008231 | 3300012925 | Vadose Zone Soil | ILYYVTVVDPKAYAKPIEGRHVTLKLRPKLEIEELPCVWSEENAFTKRIREPAAAKTTK* |
| Ga0137419_115421661 | 3300012925 | Vadose Zone Soil | VIDPKAYTKPIEGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAAKTTK* |
| Ga0137416_100758861 | 3300012927 | Vadose Zone Soil | SPAGFPHTEDMRITERYQRVDHDTILYTLTVLDPMAYTKPIEGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAAKTTK* |
| Ga0137416_107527012 | 3300012927 | Vadose Zone Soil | ERYQRIDHDTILYNISVVDLKAYTKPIVGLQKTFKLRPHAEIEEFPCVWSEENSFTKRIREPAAAKPAK* |
| Ga0137416_109934301 | 3300012927 | Vadose Zone Soil | PMAYTKPIEGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAAKTSK* |
| Ga0137416_122405781 | 3300012927 | Vadose Zone Soil | ILYDMTVTDPKAYSKPIVAPQRTMKLKPHEEIEEQPCVWSQENEFAKRIREPATRNPTR* |
| Ga0137404_105454121 | 3300012929 | Vadose Zone Soil | HDTFLYNITVADPKAYSKPIEGRHVTFKLKTHVEIEELPCVWSEENAFTKRIREPAAAKPAK* |
| Ga0164298_113103231 | 3300012955 | Soil | HDTIIYDLTISDPKAYAKTIVTPHRTLKLKPTGEIAEYPCVWTEENSFTKRIREPATPKNNQ* |
| Ga0164304_104505682 | 3300012986 | Soil | YNRVDHDTIIYDLTISDPKAYAKTIVTPHRTLKLKPTGEIAEYPCVWTEENSFTKRIREPATPKNNQ* |
| Ga0157369_114346972 | 3300013105 | Corn Rhizosphere | DTILYDITVSDPKAYTRPVVAPQRIMKLRPHQEIEEFVCVASDEQAFSKRINEPATKTPGK* |
| Ga0181521_103618721 | 3300014158 | Bog | PKAYVKPIVAPERIMKLKPGAEMEELPCVWSEENSFTKRIRQPAVGKPNR* |
| Ga0182024_125944422 | 3300014501 | Permafrost | MRVTERYQRVDHDTLLYNITVDDPKAYTKSIVAPQKTMKLKPKEEIEELVCVWSEENSFAKRIREPASAKSTQ* |
| Ga0137418_101184072 | 3300015241 | Vadose Zone Soil | KPIEGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAAKTTK* |
| Ga0137409_108647191 | 3300015245 | Vadose Zone Soil | IERYHRLDHDTIQYNMTLTDPTAYSQPIVVPQKIMKLKPHGEIEEQPCVWSQENAFAKRIREPAAAKPAK* |
| Ga0137403_103218681 | 3300015264 | Vadose Zone Soil | ITVVDPKAYAKPIEGRHVTFKLKPRVEIEELPCVWSEENAFTKRIREPAAAKPAK* |
| Ga0187818_103912141 | 3300017823 | Freshwater Sediment | IAYDMTINDPKSYTKPIVTPHRFLKLKPGGEINEYPCVWSEENEFTQRIRNPATPKPAK |
| Ga0187819_106679942 | 3300017943 | Freshwater Sediment | AYDITITDPVAYTKPIVTPHRIMKLRPGVEIPESPCVWSQENEFTQRIRNPATPKPAK |
| Ga0187817_104588622 | 3300017955 | Freshwater Sediment | DPKAYTKPIVAPERIMKLKPGAEMEELPCVWSEENSFTKRIREPAVGKPNR |
| Ga0187817_105453271 | 3300017955 | Freshwater Sediment | TIDDPKAYVKPIVAPERIMKLKPGAEMEELPCVWSEENSFTKRIRQPAVGKPNH |
| Ga0187817_107481281 | 3300017955 | Freshwater Sediment | TIADPVAYTKPIVTPHRIMKLRPGVEIPESPCVWSQENEFTQRIRNPATPKPPK |
| Ga0187810_104336461 | 3300018012 | Freshwater Sediment | ITIDDPKAYVKPIVAPERIMKLKPGAEMEELPCVWSEENSFTRRIRQPAVGKPNH |
| Ga0066662_103146661 | 3300018468 | Grasslands Soil | QRVDGNTIVYNIRVDDPKAYTRPIIGPERIMKLRPGVEIGELPCVWSEENSFTKRIREPAVGKPNR |
| Ga0179594_103558631 | 3300020170 | Vadose Zone Soil | YTLSVVDPMAYTKPIEGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAAKTTK |
| Ga0179592_101267112 | 3300020199 | Vadose Zone Soil | DLKAYTKPIEGRHVTLKLRPKLEIEELPCVWSEENAFTKRIREPAAKTAK |
| Ga0210403_109217201 | 3300020580 | Soil | VDHDTILYDLTVTDPMAYTKPIVAPQRTMKLRPHEEIEEQPCVWSQENEFAKRIREPATPKLSK |
| Ga0210405_100510274 | 3300021171 | Soil | NIRVDDPKAYTKPVVGPERIMKLRPGQEIGELPCVWSEENSFTRRIREPAVGKPNR |
| Ga0210408_113079011 | 3300021178 | Soil | VTERYHRVDHDTILYDITVTDPMAYTKPIVALQKIMKLRPHAEIEEQPCVWSQENEFTQRIRNPATPKAAK |
| Ga0210408_114192481 | 3300021178 | Soil | QRVDRNTILYNIRVDDPKAYTKPIIGPERMMKLRPGVEIGELPCVWSEENSFTKRIREPAVGKPNR |
| Ga0210396_104243971 | 3300021180 | Soil | RVDHDTIAYDMTITDPKAYAKPVVTPHRVMKLKPNEEISEQPCVWSQENEFAQRIRNPATPQPAK |
| Ga0210396_108749312 | 3300021180 | Soil | YTRVDRDTISYDLTITDPTAYTKPVITPHRTLKLKTGVEVPESICVWSEENEFTQRIRNPATPKPAK |
| Ga0210393_107204622 | 3300021401 | Soil | TILYNITVDDPKAYAKAIVGPQRTMKLRPNAEIEELVCAWSEENAFTKRIREPAANKPTK |
| Ga0210394_108720241 | 3300021420 | Soil | DTILYNISVTDPMSYARPIPGPQRIMKLKPGAEIDELPCVWSDENEFTKRIREPAASKSA |
| Ga0210394_109685542 | 3300021420 | Soil | SEEMRTTERYHRVDHDTILYDLTVTDPMAYTKPIVAPQRTMKLRPHEEIEEQPCVWSQENEFAKRIREPATRNPTK |
| Ga0210384_115696821 | 3300021432 | Soil | YKRVDSNTIRYNITVEDTKAYSKPIVAPERTMKLRPGAQIEELPCVWSEENAFTRRIRKPAVGPPNR |
| Ga0187846_101404822 | 3300021476 | Biofilm | TERYQRVDRDTMRYNIRVDDPKAYTKPIIAPERIMKLRPGVELSELPCVWSEENSFTKRIREPAVRSPN |
| Ga0210402_113875611 | 3300021478 | Soil | NIRVDDPKAYTKPIIGPERMMKLRPGVEIGELPCVWSEENSFTKRIREPAVGKPNR |
| Ga0210410_106939031 | 3300021479 | Soil | YTRVDHDTISYDLTITDPTAYTKPIVTPHRTLKMKTGVEIPESICVWSEENEFTQRIRNPATPKPAK |
| Ga0210409_102849213 | 3300021559 | Soil | LYDMTVTDPMAYTKPIVAPQRTMKLKPREEIEEQPCVWSLENEFAKRIREPAAHNPAK |
| Ga0210409_105948922 | 3300021559 | Soil | VDHDTILYTLTVVDPKAYTKPIEGRHVTLKLRPHQEIEELPCVWSEENSFTKRIREPAASKPAK |
| Ga0210409_107923562 | 3300021559 | Soil | MRVTERYQRVDRDTIRYNITVVDPKAYTKPIVGPDRTMKLRPGAHVEELPCVWSEENSFTNRIRKPAVGQPAR |
| Ga0210409_108522203 | 3300021559 | Soil | SEDMRVTERYQRIDRNTIVYNIRVDDPKAYTKPIIGPERIMKLRTGVEIGELPCVWSEENSFTKRIREPAVGKPNR |
| Ga0242657_10429151 | 3300022722 | Soil | KPIIGPERMMKLRPGVEIGELPCVWSEENSFTKRIREPAVGKPNR |
| Ga0228598_10182331 | 3300024227 | Rhizosphere | TERYHRVDHDTILYDLTISDPTAYTKPIVTPRRTLKLKTGEEIAEYPCVWSEENSFTKRIREPATPKPAQ |
| Ga0137417_11603781 | 3300024330 | Vadose Zone Soil | DMHITERYQRVDHDTILYTLTVIDPKAYTKPIEPIEGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAAKTTK |
| Ga0207699_112278131 | 3300025906 | Corn, Switchgrass And Miscanthus Rhizosphere | RNTIVYNIRVDDPKAYTKPIVGPERMMKLRPGGEISELPCVWSDENSFTKRIREPAVGKPNR |
| Ga0209890_100231153 | 3300026291 | Soil | MTITDPKAYAKPVVTPHRTMKLKPNEEISEQPCVWSQENEFAQRIRNPATPKTTKQ |
| Ga0209131_13624651 | 3300026320 | Grasslands Soil | QRVDRDTFLYNITVVDPKAYTKPIEGRHVTFKLKPRVEIEELPCVWSEENAFTKRIREPAAAKPAK |
| Ga0209158_12707381 | 3300026333 | Soil | YQRVDGNTIVYNTRVEDPKAYTRPIIGSERIMKLRPGVEIGELPCVWSEENSFTKRIREPAVGKPNR |
| Ga0209577_103743351 | 3300026552 | Soil | YTKPVIGPERIMKLRPGVEIGELPCVWSEENSFTKRIREPAVGKPNR |
| Ga0179587_108343812 | 3300026557 | Vadose Zone Soil | LYNITIDDPKAYGKPIVGPPRTMKLRPNDELIESVCVMSEEKTFAKRIGEPAASKPVK |
| Ga0179587_108428672 | 3300026557 | Vadose Zone Soil | VDPMAYTKPIEGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAAKTTK |
| Ga0208043_11541592 | 3300027570 | Peatlands Soil | DTIVYDMTVTDPMAYTKPIVAPQRIMKLKPHEEIEEQPCVWSLENEFAKRIREPAAHNPA |
| Ga0209736_11845411 | 3300027660 | Forest Soil | YQRVDRNTILYNIRVDDAKAYTKPIIGPERMMKLRPGVEIGELPCVWSEENSFTKRIREPAVGKPNR |
| Ga0209580_104470562 | 3300027842 | Surface Soil | TDPMAYTKPIVAPQRIMKLKPHEEIEEQPCVWSLENEFAKRIREPAAHKPAK |
| Ga0209068_103399051 | 3300027894 | Watersheds | ITVTDPKAYTKPIAGPQRTMKLKPGAEIEEQPCVWSQENAFAKRIREPAASKPAK |
| Ga0209415_109435521 | 3300027905 | Peatlands Soil | DHDTIQYDITVTDPMAYTKPIVGPRRYLKLRPKAEIEELPCVWSEENSFAKRIREPAAAKPAK |
| Ga0209006_105097291 | 3300027908 | Forest Soil | TERYHRVDHDTIAYDLTISDPMAYTKPIVTPRRILKLKTGEEIGEYPCVWSEENSFTKRIREPATPKPAK |
| Ga0209006_105574403 | 3300027908 | Forest Soil | AYTKPIVAPQKTLKLKPHGEIDELPCVWSEENEFTQRIRNPATPKPAK |
| Ga0209526_102799773 | 3300028047 | Forest Soil | TILYYVTVVDPKAYTKPIEGRHVTLKLRPKLEIEELPCVWSEENAFTKRIREPAAAKPAK |
| Ga0137415_100890292 | 3300028536 | Vadose Zone Soil | KPIEGRHVTLKLRPHEEIEELPCVWSEENAFTKRIREPAAAKTTK |
| Ga0137415_103652561 | 3300028536 | Vadose Zone Soil | MRITERYQRIDHDTILYNISVVDLKAYTKPIVGLQKTFKLRPHAEIEEFPCVWSEENSFTKRIREPAAAKPAK |
| Ga0265753_10540491 | 3300030862 | Soil | MTVTDPMAYTKPIVAPQRIMKLKPHEEIEEQPCVWSLENEFAKRIREPAAHNPAK |
| Ga0302325_125441392 | 3300031234 | Palsa | ERYHRVDHDTIVYDLTITDPMAYTKPVVATQKILKLKPHQEIEELTCVWSEENEFTQRIRIPATPKPAK |
| Ga0318561_108165672 | 3300031679 | Soil | YSRPIVGPQRTFKLRPKAEIEELVCVWSEENAFAKRIREPAAAPPPK |
| Ga0307476_110570612 | 3300031715 | Hardwood Forest Soil | DMTVTDPKAYTKPIVAQQRIMKLKPHEEIEEQPCVWSLENEFAKRIREPAARNPAK |
| Ga0310917_109869511 | 3300031833 | Soil | QRVAHDTLLYNSTIDDPKAYSRPIVGPQRTFKLRPKAEIEELVCVWSEENAFAKRIREPAAAPPPK |
| Ga0307479_102675542 | 3300031962 | Hardwood Forest Soil | MRVTERYQRVDRNTIAYNIRVEDPKAYTRPVVGPERMMKLRPGVEIGELPCVWSEENSFTKRIREPAVGKPNR |
| Ga0318506_102243142 | 3300032052 | Soil | LYNSTIDDPKAYSRPIVGPQRTFKLRPKAEIEELVCVWSEENAFAKRIREPAAAPPPK |
| Ga0318504_105423771 | 3300032063 | Soil | PKAYSKPIVGPQRTFKLRPKAEIEELVCVWSEENAFAKRIREPAAAPPPK |
| Ga0335079_103362532 | 3300032783 | Soil | DQNTLLYSITVTDPKAYTKPVTSPQRTFKLRPGAEIEELPCVWSEENEFTKRIREPAAQKPAK |
| Ga0316620_101858643 | 3300033480 | Soil | KHIVGPQRTYKRRPGAEIAELPCVWSEENSFAKRIREPAASKPAK |
| Ga0316624_102222171 | 3300033486 | Soil | RIVERYRRVDLDTIHYNITVTDPKAYTKHIVGPQRTYKRRPGAEIAELPCVWSEENSFAKRIREPAASKPAK |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |