NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F105584

Metagenome / Metatranscriptome Family F105584

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105584
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 79 residues
Representative Sequence MKYQSGEEIRKGDKVLFHGEPGEIEFVVDGLVGDPTMDWHMREQGPGVMVLEPKRFGRAYIRDTENAEDLEFVSRA
Number of Associated Samples 96
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 73.00 %
% of genes near scaffold ends (potentially truncated) 27.00 %
% of genes from short scaffolds (< 2000 bps) 79.00 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction Yes
3D model pTM-score0.80

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (91.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland
(10.000 % of family members)
Environment Ontology (ENVO) Unclassified
(19.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 11.54%    β-sheet: 29.81%    Coil/Unstructured: 58.65%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.80
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
b.172.1.1: YopX-liked2p84a12p840.58794
b.34.5.1: Ribosomal proteins L24p and L21ed1vq8t11vq80.57823
d.3.1.14: Phytochelatin synthased6thoa16tho0.5618
d.3.1.1: Papain-liked1pcia_1pci0.56085
d.3.1.1: Papain-liked3f5va_3f5v0.55886

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF09907HigB_toxin 3.00
PF03699UPF0182 3.00
PF13620CarboxypepD_reg 2.00
PF07676PD40 2.00
PF00920ILVD_EDD 2.00
PF01797Y1_Tnp 2.00
PF15529Ntox24 1.00
PF13662Toprim_4 1.00
PF00497SBP_bac_3 1.00
PF01794Ferric_reduct 1.00
PF14437MafB19-deam 1.00
PF05593RHS_repeat 1.00
PF03551PadR 1.00
PF16193AAA_assoc_2 1.00
PF13333rve_2 1.00
PF13177DNA_pol3_delta2 1.00
PF02636Methyltransf_28 1.00
PF00872Transposase_mut 1.00
PF06271RDD 1.00
PF00248Aldo_ket_red 1.00
PF01894UPF0047 1.00
PF00999Na_H_Exchanger 1.00
PF12850Metallophos_2 1.00
PF04073tRNA_edit 1.00
PF00009GTP_EFTU 1.00
PF04402SIMPL 1.00
PF10518TAT_signal 1.00
PF13419HAD_2 1.00
PF13490zf-HC2 1.00
PF030614HBT 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0129Dihydroxyacid dehydratase/phosphogluconate dehydrataseCarbohydrate transport and metabolism [G] 4.00
COG1615Uncharacterized membrane protein, UPF0182 familyFunction unknown [S] 3.00
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 2.00
COG0025NhaP-type Na+/H+ or K+/H+ antiporterInorganic ion transport and metabolism [P] 1.00
COG0432Thiamin phosphate synthase YjbQ, UPF0047 familyCoenzyme transport and metabolism [H] 1.00
COG0475Kef-type K+ transport system, membrane component KefBInorganic ion transport and metabolism [P] 1.00
COG1565SAM-dependent methyltransferase, MidA familyGeneral function prediction only [R] 1.00
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 1.00
COG1714Uncharacterized membrane protein YckC, RDD familyFunction unknown [S] 1.00
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 1.00
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 1.00
COG2859Outer membrane channel-forming protein BP26/OMP28, SIMPL familyCell wall/membrane/envelope biogenesis [M] 1.00
COG2968Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domainFunction unknown [S] 1.00
COG3004Na+/H+ antiporter NhaAEnergy production and conversion [C] 1.00
COG3209Uncharacterized conserved protein RhaS, contains 28 RHS repeatsGeneral function prediction only [R] 1.00
COG3263NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domainsEnergy production and conversion [C] 1.00
COG3328Transposase (or an inactivated derivative)Mobilome: prophages, transposons [X] 1.00
COG3471Predicted secreted (periplasmic) proteinFunction unknown [S] 1.00
COG4651Predicted Kef-type K+ transport protein, K+/H+ antiporter domainInorganic ion transport and metabolism [P] 1.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms91.00 %
UnclassifiedrootN/A9.00 %

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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664021|ICCgaii200_c0608748All Organisms → cellular organisms → Bacteria906Open in IMG/M
3300000363|ICChiseqgaiiFebDRAFT_11099171All Organisms → cellular organisms → Bacteria1067Open in IMG/M
3300001139|JGI10220J13317_10368908All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300003321|soilH1_10355407All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1186Open in IMG/M
3300004091|Ga0062387_100258061All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1095Open in IMG/M
3300005289|Ga0065704_10294662All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium889Open in IMG/M
3300005293|Ga0065715_10544159All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium746Open in IMG/M
3300005534|Ga0070735_10054078All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2643Open in IMG/M
3300005538|Ga0070731_10053823All Organisms → cellular organisms → Bacteria → Acidobacteria2680Open in IMG/M
3300005561|Ga0066699_11289955All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300005764|Ga0066903_103575079All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300005764|Ga0066903_108235138All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300005829|Ga0074479_10394727All Organisms → cellular organisms → Bacteria3508Open in IMG/M
3300005842|Ga0068858_100522868All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1147Open in IMG/M
3300005921|Ga0070766_10127553All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1535Open in IMG/M
3300006059|Ga0075017_101271865All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium577Open in IMG/M
3300006176|Ga0070765_100231121All Organisms → cellular organisms → Bacteria1690Open in IMG/M
3300006800|Ga0066660_10339942All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1215Open in IMG/M
3300006804|Ga0079221_10654917Not Available721Open in IMG/M
3300006844|Ga0075428_100002966All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae18502Open in IMG/M
3300006852|Ga0075433_11490106All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium584Open in IMG/M
3300007265|Ga0099794_10105723All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1408Open in IMG/M
3300009094|Ga0111539_12814034All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium563Open in IMG/M
3300009100|Ga0075418_10327077All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1636Open in IMG/M
3300009610|Ga0105340_1000852All Organisms → cellular organisms → Bacteria14148Open in IMG/M
3300009643|Ga0116110_1008118All Organisms → cellular organisms → Bacteria4507Open in IMG/M
3300009645|Ga0116106_1140936All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300010048|Ga0126373_10000075All Organisms → cellular organisms → Bacteria84264Open in IMG/M
3300010159|Ga0099796_10149416All Organisms → cellular organisms → Bacteria → Acidobacteria919Open in IMG/M
3300010339|Ga0074046_10164753All Organisms → cellular organisms → Bacteria → Acidobacteria1408Open in IMG/M
3300010361|Ga0126378_10077849All Organisms → cellular organisms → Bacteria → Acidobacteria3202Open in IMG/M
3300011120|Ga0150983_16228681All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium622Open in IMG/M
3300011425|Ga0137441_1018934All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1413Open in IMG/M
3300012203|Ga0137399_10538734All Organisms → cellular organisms → Bacteria → Acidobacteria980Open in IMG/M
3300012205|Ga0137362_10635124All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium920Open in IMG/M
3300012361|Ga0137360_10705592All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium866Open in IMG/M
3300012582|Ga0137358_10963442Not Available555Open in IMG/M
3300012683|Ga0137398_10386787All Organisms → cellular organisms → Bacteria → Acidobacteria951Open in IMG/M
3300012925|Ga0137419_11244025All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4624Open in IMG/M
3300012971|Ga0126369_10387858Not Available1431Open in IMG/M
3300014156|Ga0181518_10435433All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium629Open in IMG/M
3300014169|Ga0181531_10123893All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1554Open in IMG/M
3300015200|Ga0173480_10063119All Organisms → cellular organisms → Bacteria → Proteobacteria1701Open in IMG/M
3300015371|Ga0132258_13366058All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1099Open in IMG/M
3300015372|Ga0132256_100929067All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium986Open in IMG/M
3300015374|Ga0132255_100842107All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1369Open in IMG/M
3300016422|Ga0182039_11945545All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium540Open in IMG/M
3300017821|Ga0187812_1005813All Organisms → cellular organisms → Bacteria → Acidobacteria4256Open in IMG/M
3300017822|Ga0187802_10148486Not Available895Open in IMG/M
3300017939|Ga0187775_10318399All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300017939|Ga0187775_10458883All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium538Open in IMG/M
3300017940|Ga0187853_10119015All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1286Open in IMG/M
3300017966|Ga0187776_10361934All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium960Open in IMG/M
3300017970|Ga0187783_10538270All Organisms → cellular organisms → Bacteria846Open in IMG/M
3300018012|Ga0187810_10009006All Organisms → cellular organisms → Bacteria → Acidobacteria3485Open in IMG/M
3300018016|Ga0187880_1286898Not Available713Open in IMG/M
3300018062|Ga0187784_11213516Not Available598Open in IMG/M
3300018084|Ga0184629_10669925All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium524Open in IMG/M
3300018085|Ga0187772_10942744Not Available629Open in IMG/M
3300018086|Ga0187769_10252783All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1312Open in IMG/M
3300018086|Ga0187769_10927802Not Available659Open in IMG/M
3300018088|Ga0187771_10012604All Organisms → cellular organisms → Bacteria6169Open in IMG/M
3300018088|Ga0187771_11590959All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium555Open in IMG/M
3300018468|Ga0066662_10271481All Organisms → cellular organisms → Bacteria1403Open in IMG/M
3300021168|Ga0210406_10053442All Organisms → cellular organisms → Bacteria3525Open in IMG/M
3300021170|Ga0210400_10111792All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2172Open in IMG/M
3300021362|Ga0213882_10021571All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2445Open in IMG/M
3300021401|Ga0210393_11036555All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300021433|Ga0210391_10000007All Organisms → cellular organisms → Bacteria538221Open in IMG/M
3300021560|Ga0126371_10010215All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE00688454Open in IMG/M
3300025271|Ga0207666_1040230All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium730Open in IMG/M
3300025500|Ga0208686_1093185All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300025930|Ga0207701_10003667All Organisms → cellular organisms → Bacteria15725Open in IMG/M
3300026035|Ga0207703_11913461All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium569Open in IMG/M
3300026557|Ga0179587_10480387All Organisms → cellular organisms → Bacteria → Acidobacteria814Open in IMG/M
3300026928|Ga0207779_1004797All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1986Open in IMG/M
3300027533|Ga0208185_1001677All Organisms → cellular organisms → Bacteria6222Open in IMG/M
3300027671|Ga0209588_1227434All Organisms → cellular organisms → Bacteria575Open in IMG/M
(restricted) 3300027799|Ga0233416_10320733All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium534Open in IMG/M
3300027869|Ga0209579_10556713All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium622Open in IMG/M
3300027909|Ga0209382_10305865All Organisms → cellular organisms → Bacteria1792Open in IMG/M
(restricted) 3300027995|Ga0233418_10063110All Organisms → cellular organisms → Bacteria → Acidobacteria1056Open in IMG/M
3300030815|Ga0265746_1040752All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300031236|Ga0302324_103365587All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium522Open in IMG/M
3300031670|Ga0307374_10167941All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1653Open in IMG/M
3300031820|Ga0307473_11282967All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300031823|Ga0307478_10017474All Organisms → cellular organisms → Bacteria5020Open in IMG/M
3300031847|Ga0310907_10416028Not Available703Open in IMG/M
3300031890|Ga0306925_10591086All Organisms → cellular organisms → Bacteria1173Open in IMG/M
3300031912|Ga0306921_10699798All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales1165Open in IMG/M
3300031938|Ga0308175_101307187All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium808Open in IMG/M
3300031942|Ga0310916_10376545All Organisms → cellular organisms → Bacteria1207Open in IMG/M
3300031962|Ga0307479_10049227All Organisms → cellular organisms → Bacteria4050Open in IMG/M
3300032261|Ga0306920_100551065All Organisms → cellular organisms → Bacteria → Proteobacteria1709Open in IMG/M
3300032770|Ga0335085_10387291All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1627Open in IMG/M
3300032783|Ga0335079_11404361All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300032828|Ga0335080_10651792All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1102Open in IMG/M
3300032892|Ga0335081_11776090All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium668Open in IMG/M
3300033402|Ga0326728_10102445All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3442Open in IMG/M
3300034124|Ga0370483_0039335All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1463Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland10.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland3.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.00%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil3.00%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.00%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment2.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.00%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.00%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.00%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)1.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.00%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.00%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil1.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere1.00%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.00%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil1.00%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.00%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.00%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.00%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300001139Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soilEnvironmentalOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005829Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBCEnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300009643Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40EnvironmentalOpen in IMG/M
3300009645Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011425Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT244_2EnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014156Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaGEnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017821Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017939Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MGEnvironmentalOpen in IMG/M
3300017940Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100EnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300018016Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40EnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021362Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09EnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025271Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025500Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300026928Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 44 (SPAdes)EnvironmentalOpen in IMG/M
3300027533Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027799 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0_MGEnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027995 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_1_MGEnvironmentalOpen in IMG/M
3300030815Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031670Soil microbial communities from Risofladan, Vaasa, Finland - OX-3EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300034124Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
ICCgaii200_060874822228664021SoilMPLKYMSGEEIRKGDRVLFHGESGEIEYVVDGLIGDAKIDWHMREHGPGVLVSEPKHFGRAYIREMTHLVFVSRAEPN
ICChiseqgaiiFebDRAFT_1109917133300000363SoilMPLKYMSGEEIRKGDRVLFHGEPGEIECVVDGLIGDAKIDWHMREHGPGVLVSEPKHFGRAYIREMTHLVFVSRAEPN*
JGI10220J13317_1036890823300001139SoilMPLKYLSGEEVRKGDRVLFHGEPGEIEYVVDGFVGDPEIDWHMREHGPGVLIREPKYFGLVYTRGID
soilH1_1035540713300003321Sugarcane Root And Bulk SoilMKYRSGEEIRQGDKVRYDGELGEIEFVVEGLTGDPAMDCYIRELGPGVSVIEPQVFGRVYVSDTENAEDLILVSR*
Ga0062387_10025806123300004091Bog Forest SoilVRYRSGEGIRKGDQVLFHGEPGEIEFVVEALTGDPAMEWNLKENGPGAMILEPKFFGRVYLRDTETSDLVLVSRSA*
Ga0065704_1029466223300005289Switchgrass RhizosphereMPLKYLSGEEVRKGDRVLFHGEPGEIEYVVDGFVGDPEIDWHMREHGPGVLIREPKYFGLVYTRGIDDEDLVFVSRAAQ*
Ga0065715_1054415923300005293Miscanthus RhizosphereMPLKYLSGEEVRKGDRVLFHGEPGEIEYVVDGFVGDPEIDWHMREHGPGVLIREPKYFGLVYTRGIDDEDLMFVSRAAQ*
Ga0070735_1005407843300005534Surface SoilMSGNKLKYQSGEEIRKGDHVLFHGEPAEIEFVVSDPVTEPSLDWYLENEGPGVMVIEPKVFGRAYIQQTHKNEDLVFVSRAEVVHS*
Ga0070731_1005382343300005538Surface SoilSGEEIRKGDKVLFHGEPGKIEFVVDKLVGDPAMDWHMKEQGPGVMILEPKAFGRAYIRDTENAEDLVFVSRG*
Ga0066699_1128995513300005561SoilMKYQSGEEIRKGDKVLFHGEPGEIEFVVDKLVGDPAMDWYMKEEGPGVMVVEPKHFGRAFLRDTHNAEDLKFVSRAGTKR*
Ga0066903_10357507923300005764Tropical Forest SoilMSLKYHSGQVIMKGDRVLFHGEPGTIEFVIDGLVGDPAMDWHMKENGPGVMIIEPKAFGRVYTRETQDDEQLVFLGRTEGP*
Ga0066903_10823513813300005764Tropical Forest SoilMPLKYQSGEEIRKGDRVLFHGEPGEVEFVVDGFAGDPEMDWHMENHGRGVMILEPKCFGRAYISDTEDAEDLEFVSRG*
Ga0074479_1039472743300005829Sediment (Intertidal)MKYESGEEILKGDRILFHGEEAEIEFVVEETTGDLAQDWYIKEFGPGVMISEPKVFGRAYQRETEGAEYLVFVSRSSPPRTR*
Ga0068858_10052286813300005842Switchgrass RhizosphereAVPGPIAVATETRMPLTYRSGDEIREGDRVLFHGEPGEIEFVVDALAGDPARDWYMLELGPGVMVREPKHFGSAYLSDTTGADLILVSRKS*
Ga0070766_1012755323300005921SoilMKYTSGEEIRKGDKVLFHGEPGEIEFAVENLVGDPAMDWHMREQGPGVMVLEAKSFQRAYVCDTENAEDLQFVSRG*
Ga0075017_10127186513300006059WatershedsGEEIRKGDKVLFHGEPGEIEFIADKLIGDPAMDWHMNEQGPGVMVLEPKRYGHAYIRDTENAEDLVLVSRSEGD*
Ga0070765_10023112113300006176SoilVAMPVRYQSGEAIIKGDRVLFQGEPGEIEFVVDRIVGDPDLDWYMELGPGAMVLEPKFFGRAFITNTEKTEDLVFLARSAAS*
Ga0066660_1033994223300006800SoilVKYHSGEEIRKGDKVLFHGEPAEIEFIADSLTGDPAIDSHLKENGPGVMVLEPKYFGSAFIRDTENAEDLVLRSRKDEH*
Ga0079221_1065491723300006804Agricultural SoilRAREGLSAMRYKSGEEIRKGDKILFHGEPGEIEAIVDRLIGDPAMDWHMNEQGPGVMVRESKRFGHAYRRDTENAEDLILVSRSEGD*
Ga0075428_100002966143300006844Populus RhizosphereMPLKYMSGEEIRKGDRVLFHGEPGEIEYVVDGLIGDAKIDWHMREHGPGVLVSEPKHFGRAYIREMTHLVFVSRAEPN*
Ga0075433_1149010623300006852Populus RhizosphereMALKYESGDEIRPGDKVSFHGEPGEIEFVVDGLTGDPAHDWYVKEFGSGVMVLEPKVVGRAFISDTEGAEDLVLVSRRDNT*
Ga0099794_1010572313300007265Vadose Zone SoilMRYQSGDEIQKGDRVLFHGEPGEIEFVVDKLTGDPVLDWNMKENGPGVMILEPKLFGHVYMRDTENAEDLILVSRRDKG*
Ga0111539_1281403423300009094Populus RhizosphereMSLKYQTGEEIRKGDRVLFHGEPGEIEFVVDSLVVDPATDWYIRELGPGVMVLEPKYFGCAYVRDTTNLVFVSRDLSS*
Ga0075418_1032707723300009100Populus RhizosphereMPLKYLSGEEVRKGDRVLFHGEPGEIEYVVDGFVGDPEIDWHMREHGPGVLIREPKYFGLVYTRGIDDEDLVFVAGRLSDDSGS*
Ga0105340_1000852103300009610SoilMAMPLKYQSGEEIRKGDRVMFHGEPGEIEFVADRLVGDPALDWHVNESGPGVMVLEPKYFGRAYVSATHEAEDLVFVSRSLDPNH*
Ga0116110_100811823300009643PeatlandMKYQSGDEIRKGDRVLYHGEPGEIEIVVDRFVGDPAMDWYMKELGPGVMVAGLRSFGRVYTSDTENDEDLEFVSRG*
Ga0116106_114093613300009645PeatlandMKYQSGDEIRKGDRVLYHGEPGEIEIVVDRFVGDPAMDWYMKELGPGVMVAGLRSFGRVYTSDTENDEDLEFVSR
Ga0126373_1000007543300010048Tropical Forest SoilMLRYRTGEEIRKADRVLFHGRPGEIELVVADRTGDPAIDWYVENEGAGVMVLEPRVFGRAYVQHTEEAEDLVFVSRAVTD*
Ga0099796_1014941623300010159Vadose Zone SoilVKYQSGEEIRKGDRVLFHGEPGEIEFVAEKLVADPTVDWNIKENGPGVMIVEPKVFGHVYIRDTENNEDLEFVSRIGKM*
Ga0074046_1016475323300010339Bog Forest SoilMPIKYHLGEAIRKGDRVLFHGEPGEIEFVVDRLVGDPATDWYMEQGPGVMVIEPKHSGRVFIRDTENAEDLVLVSRTEAS*
Ga0126378_1007784923300010361Tropical Forest SoilMLRYRTGEEIRKADRVLFHGRPGEIELVVADRTGDPAIDWYVENEGAGVMVLEPRVFGRAYVQHTEEAEDLVFVS*
Ga0150983_1622868113300011120Forest SoilMNENIPKYQSGEEIKKGDRVLFHGEPGEIEFVVTRRSGDLAMDWYIENEGPGVMVLESKVFGRAYIQRTEIAEDLLFVSRAEMPSVTPSP*
Ga0137441_101893433300011425SoilMPLKYQSGEEIRKGDRVMFHGEPGEIEFVADRLVGDPALDWHVNESGPGVMVLEPKYFGRAYVSATHEAEDLVFVSRSLDPNH*
Ga0137399_1053873423300012203Vadose Zone SoilMKYQSGEEIRKGDRVLFHGEPGEIEFVAEKLVGDPIADWNIKENGPGVMIVEPKFFGHVYIRDTENNEDLEFVSRIGKT*
Ga0137362_1063512423300012205Vadose Zone SoilMKYQSGEEIRKGDKVLFHGEPGEIDFIVEALSGDTAMDWYVKEYGPGVMVVEPKAGRTFLTETEDAEDLVLVSRSNGK*
Ga0137360_1070559223300012361Vadose Zone SoilMKYQSGEEIRKGDKVLFHGEPGEIDFIVEALSGDTAMDWYVKEYGPGEMVVEPKAGRTFLTETEDAEDLVLVSRSNGK*
Ga0137358_1096344213300012582Vadose Zone SoilVKYQSGEEIRKGDRVLFHGEPGEIEFVAEKLVGDPIADWNIKENGPGVMIVEPKFFGHVHIRDTENNEDLEFVSRIGKM*
Ga0137398_1038678733300012683Vadose Zone SoilVKYQSGEEIRKGDRVLFHGEPGEIEFVAEKLVGDPIADWNIKENGPGVMIVEPKFFGHVYIRDTEDNEDLEFVSRIGKM*
Ga0137419_1124402523300012925Vadose Zone SoilMKYQSGEEIRKGDRVLFHGEPGEIEFVAEKLVGDPIADWNIKENGPGVMIVEPKVFGHVYIRDTENNEDLEFVSRIGKT*
Ga0126369_1038785823300012971Tropical Forest SoilMKYESGEEIRRGDKVLFHGEPGEIEFVVDALTGDPATDWYVKEHGPGAMVVERKTGRTFLTETEDAEDLVLVSRSN*
Ga0181518_1043543323300014156BogMKYKSGEEIRTGDRALFHGEPAEIAFVVERLTGDPAMDWYMSEQGPGIMVLEPKRFGHVFVRSTENREDLRLVARA*
Ga0181531_1012389333300014169BogMKYQSGEEIRKGDRVLFHGEPGEIELVVVELVGIPTADWHMTEHGPGVLIFEPKNFGHIYLRDTENAEDLVLVSRNM*
Ga0173480_1006311923300015200SoilMPLKYLSGEEVRKGDRVLFHGEPGEIEYVVDGFVGDPEIDWHMREHGPGVLIREPKYFGLVYTREGVRNSVCGA*
Ga0132258_1336605823300015371Arabidopsis RhizosphereMSLKYQTGEEIQKGDRVLFHREPGEIEFVVDSLVGDPATDWYFRELGPGVMILEPKYFGCAYVRDTENDEDLVFVCRGASEKRV*
Ga0132256_10092906713300015372Arabidopsis RhizosphereMPLTYRSGDEIREGDRVLFHGEPGEIEFVVDALTGDPARDWYMLELGPGVMVREPKHFGSAYISDTTGADLILVSRKS*
Ga0132255_10084210723300015374Arabidopsis RhizosphereMPLTYRSGDEIKEGDRVLFHGEPGEIEFVVDALTGDPARDWYMLELGPGVMVREPKHFGSAYVSDTRNADLILVTREG*
Ga0182039_1194554513300016422SoilMKYQTGDEILRGDRVLFHGEPGEIEFIVDALSGDPAMDWYLNEHGPGVMILEPKIFGRAFICDTENAEDLVLVSRTHHL
Ga0187812_100581333300017821Freshwater SedimentMKYQSGEEIRKGDKVLFHGEPGEIEFVVEKLVGDPVIDWHMKEQGPGVMVLEPKSFGRAFIRDTENAEDLQLVARGGDGPPLVL
Ga0187802_1014848613300017822Freshwater SedimentGEAIRKGDRVLFHGEPGEVEFVADALTGDPAMDWYIEELGGGVMIVEPKHFGHAFLHDTENAEDLVFISRAENEAFT
Ga0187775_1031839913300017939Tropical PeatlandMRYKSGQEIRKGDKVLFHGEPGEIEFVVEKLVGDPTLDWHMKQHGPGVMVLEPRSSGRVYMSRPENAEDLEFVSRS
Ga0187775_1045888313300017939Tropical PeatlandAAKRWRSAMRYKSGEEIRKGDRVLFHGEPAEIELVIEKLTGDSAVDWHIREHGAGVMVVEPKNFGRVFLRDTENAEDLVLVSRLEQV
Ga0187853_1011901523300017940PeatlandMKYQSGDEIRKGDRVLYHGEPGEIEIVVDRFVGDPAMDWYMKELGPGVMVAGLRSFGRVYTSDTENDEDLEFVSRG
Ga0187776_1036193423300017966Tropical PeatlandMRYKSGEEIRKGDRVLFHGEPAEIELVIEKLTGDSAVDWHIREHGAGVMVVEPKNFGRVFLRDTENAEDLVLVSRLEQV
Ga0187783_1053827023300017970Tropical PeatlandMKYQSGEEIRKGDRVLYHGEPGDIEFVVEKLVGDPKLDWYMTEFGPSVMVREPKFFGRVVIQDTENDEDLELVSRG
Ga0187810_1000900643300018012Freshwater SedimentMKYQSGEEIRKGDKVLFHGEPGEIEFVVEKLVGDPVIDWHMKEQGPGVMVLEPKSFGRAFIRDTENAEDL
Ga0187880_128689813300018016PeatlandMKYQSGDEIRKGDRVLYHGEPGEIEIVVDRFVGDPAMDWYMKELGPGVMVAGLRSCGRVYTSDTEKDEDLEFVSRG
Ga0187784_1121351613300018062Tropical PeatlandMKYQSGEEIRKGDRVLYHGEPGEIELVVDRFVGDPAMDWYMKELGSGVMVVSLSSFGRLYICDTENEEDLEFVSRAQAPT
Ga0184629_1066992523300018084Groundwater SedimentREMAMPLKYQSGEEIRKGDRVMFHGEPGEIEFVADRLVGDPALDWHVNESGPGVMVLEPKYVGRAYVSATHEAEDLVFVSRSLDPNH
Ga0187772_1094274423300018085Tropical PeatlandSSMKYQSGEEIRKGDKVLFHGEPGEIEFVVEQFVGDPAIDSHMKENGPGAMVIEPKCFGRAYLTDPENAEDLEFLARA
Ga0187769_1025278313300018086Tropical PeatlandMKYRSGEEIRKGDKVLFYGEPGEIEFVAESLVGDPELDWYVREHGAGVMVLEPKFFGRAYIYDTESAEELEFVAIA
Ga0187769_1092780213300018086Tropical PeatlandMKYRSGEEIRKGDRVLYHAEPGEVEFVVEKFVGGPAMDWHMNEEGPGVMVFEPKFFGRVCISDTENDEDLEFVSTG
Ga0187771_1001260423300018088Tropical PeatlandVKYHSGEEIRKGDRVLYHGEPGEVEFVVEKLVGDPAVDWHMKEQGPGIMVLEPKFFGRVYTCQTEDDEDLQFVSRG
Ga0187771_1159095923300018088Tropical PeatlandMKYRSGEEIRKGDKVLFYGEPGEIEFVAESLVGDPELDWYVREHGAGVMVLEPKFFGRAYVYDPESAEELEFVARA
Ga0066662_1027148123300018468Grasslands SoilMIQKALKYQSGEEIRKGDHVLFHGESAEIELVVTDITSDPSLSWYLENEGPGVMVVEPKVFGRVYLQQTEKDEDLVFVSRA
Ga0210406_1005344223300021168SoilMKYQSGEEIRKGDKVFLHGGPGEIEFEFVVNKLVGDPAIDWHMREQGPGMIILEPQHFGRAYIIDTENAEDLEFVSRG
Ga0210400_1011179223300021170SoilMRYKSGEEIRKGDRVLFHGEPGEIEFIVDRLVGDPAMDWYLEQGPGVMVLEPKVFERAFIRDTENTEDLVLVCRSVEN
Ga0213882_1002157123300021362Exposed RockMTLKILKYQSGEEIRKGDHVLFHGEPGEIEFIVTDPLTDPSLDWYLENEGPGVMILESKALGRAYIQQTENAEDLVFVSRAQVVHG
Ga0210393_1103655513300021401SoilMKYTSGEEIRKGDKVLFHGEPGEIEFAVENLVGDPAMDWHMREQGPGVMVLEAKSFQRAYVCDTENAEDLQFVSRG
Ga0210391_100000074343300021433SoilMKYQSGEEIRKGDRVLFHGEPGEIELVVVELVGIPTADWHMTEHGPGVLIFEPKNFGHIYLRDTENAEDLVLVSRNM
Ga0126371_1001021553300021560Tropical Forest SoilMLRYRTGEEIRKADRVLFHGRPGEIELVVADRTGDPAIDWYVENEGAGVMVLEPRVFGRAYVQHTEEAEDLVFVSRAVTD
Ga0207666_104023013300025271Corn, Switchgrass And Miscanthus RhizosphereMPLKYLSGEEVRKGDRVLFHGEPGEIEYVVDGFVGDPEIDWHMREHGPGVLIREPKYFGLVYTRGIDDEDLVFVSRAAQ
Ga0208686_109318523300025500PeatlandMKYQSGDEIRKGDRVLYHGEPGEIEIVVDRFVGDPAMDWYMKELGPGVMVAGLRSFGRVYTSDTENDEDLE
Ga0207701_1000366743300025930Corn, Switchgrass And Miscanthus RhizosphereMPLKYLSGEEVRKGDRVLFHGEPGEIEYVVDGFVGDPEIDWHMREHGPGVLIREPKYFGLVYTRGIDDEDLMFVSRAAQ
Ga0207703_1191346113300026035Switchgrass RhizosphereMPLTYRSGDEIREGDRVLFHGEPGEIEFVVDALAGDPARDWYMLELGPGVMVREPKHFGSAYLSDTTGADLILV
Ga0179587_1048038723300026557Vadose Zone SoilMKYQSGEEIRKGDRVLFHGEPGEIEFVAEKLVGDPIANWNIKENGPGVMIVEPKVFGHVYIRDTENNEDLEFVSRIGKM
Ga0207779_100479743300026928Tropical Forest SoilPCRYKANRASRWGWPSMKYQSGEEIRKGDKVLFHGEPGEIEFVVDGLVGDPAMDWHMREQGPGVMVLEPKRFGRAYIRDTENAEDLEFVSRA
Ga0208185_100167783300027533SoilMAMPLKYQSGEEIRKGDRVMFHGEPGEIEFVADRLVGDPALDWHVNESGPGVMVLEPKYFGRAYVSATHEAEDLVFVSRSLDPNH
Ga0209588_122743413300027671Vadose Zone SoilMRYQSGDEIQKGDRVLFHGEPGEIEFVVDKLTGDPVLDWNMKENGPGVMILEPKLFGHVYMRDTENAEDLILVSRRDKG
(restricted) Ga0233416_1032073323300027799SedimentMKYLSGEEIRVGDKVLYHSAAGEIEFVVEKLVGDPVRDWHMEDAGPGVMVVEPKVFGRVYLPEREIDEDLVFVSRGT
Ga0209579_1055671323300027869Surface SoilKYQSGEEIRKGDKVLFHGEPGKIEFVVDKLVGDPAMDWHMKEQGPGVMILEPKAFGRAYIRDTENAEDLVFVSRG
Ga0209382_1030586523300027909Populus RhizosphereMPLKYMSGEEIRKGDRVLFHGEPGEIEYVVDGLIGDAKIDWHMREHGPGVLVSEPKHFGRAYIREMTHLVFVSRAEPN
(restricted) Ga0233418_1006311013300027995SedimentPMKYLSGEEIRVGDKVLYHSAAGEIEFVVEKLVGDPVRDWHMEDAGPGVMVVEPKVFGRVYQPEREIDEDLVFVSRGT
Ga0265746_104075223300030815SoilMKYTSGEEIRKGDKVLFHDEPGEIEFVVEKLVGDPAMDWHMREQGPGVMVRDAMSFQRAYVRDTE
Ga0302324_10336558713300031236PalsaMPVRYQSGEAIIRGDRVLFHGEPGEIEFIVDQIVGDPVLDWYMKLGPGVMVLEPKFFGRAFISDTEETEDLVFLSRSERS
Ga0307374_1016794123300031670SoilMKYQSGEEIRKGDKVLFHGETAEIEFIVDALIGDPAMDWYMKEYGPGAMVVEPKAAGRTFISETKNAEDLQFVSRG
Ga0307473_1128296713300031820Hardwood Forest SoilMKYQSGAEIRKGDKVLFHGEPGQIEFVAEKLTGNADIDWHVKEHGPGVMIVEPKAFGRVFIRDTENA
Ga0307478_1001747473300031823Hardwood Forest SoilMKYQSGEEIRKGDRVLFHGEAAEIEFIAEGPVGNPAMDWNVKHNGPGVMILEPKFFGRVYIRDSEASEDLVFVSRNQE
Ga0310907_1041602813300031847SoilSGEEVRKGDRVLFHGEPGEIEYVVDGFVGDPEIDWHMREHGPGVLIREPKYFGLVYTRGIDDEDLVFVSRAAQ
Ga0306925_1059108623300031890SoilMKYQSGEEIRKGDKVLFHGEPGEIEFVVDGLVGDPTMDWHMREQGPGVMVLEPKRFGRAYIRDTENAEDLEFVSRA
Ga0306921_1069979813300031912SoilRWHSACRYKANRASRWGWPSMKYQSGEEIRKGDKVLFHGEPGEIEFVVDGLVGDPTMDWHMREQGPGVMVLEPKRFGRAYIRDTENAEDLEFVSRA
Ga0308175_10130718723300031938SoilMKYQSGEEIREGDRVLFHGEPGEIEFVVEGLVGDPVKDWHMEDARPGVMVLEPKVFGRCFLSDTEEAEDLILVSRKSETEQQIPTSD
Ga0310916_1037654543300031942SoilAACRYKANRASRWGWPSMKYQSGEEIRKGDKVLFHGEPGEIEFVVDGLVGDPTMDWHMREQGPGVMVLEPKRFGRAYIRDTENAEDLEFVSRA
Ga0307479_1004922733300031962Hardwood Forest SoilMKYQSGEEIRKGDRVLFHGEAAEIEFIAEGPVGNPAMDWNVKHNGPGVMILEPKFFGRVYIRDSEASEDLVFVSRNQEEPKT
Ga0306920_10055106523300032261SoilMKYQSGEEIRKGDKVLFHGEPGEIEFVVDGLVGDPAMDWHMREQGPGVMVLEPKRFGRAYIRNTENAEDLEFVSRA
Ga0335085_1038729123300032770SoilMKYKSGQEIRKGDKVLFHGEPGEIEFVVEKLVGDPTLDWHIERHGPGVMVFEPRSSGRVYMSRPENAEDLEFVSRS
Ga0335079_1140436113300032783SoilMRYQSGEEIRKGDKILFHGEPGEIEFVVDKIVGNPEVDWHMREQGPGVMVLEPKRFGRAYIRDTESTEDLQFVSRG
Ga0335080_1065179213300032828SoilMKYKSGEEIRKGDRVLFHGEPGEIEFVAEKLIGDPAMDWHVKEHGPGVMVLEPKSFQRAFICDTENAEDLQLLSRG
Ga0335081_1177609023300032892SoilMKYQSGEEIRKGDKVLFHGEPGEIEFIVGALSGDPAMDWYVKEYGPGAMVVEPKAGRTFLTETEDAEDLVLVSRSNGK
Ga0326728_1010244533300033402Peat SoilMPLKYQSGEIIKKADRVLFHGEPGEIEFVVNAVVGDPAIDWYMEEGPGVMVSEPKYFGRTFIRDTENAEDLVFVSRANH
Ga0370483_0039335_193_4233300034124Untreated Peat SoilMKYTSGEEIRKGDKVLFHGEPGEIEFAVEKLVGDPAMDWHMREQGPGVMVLEAKSFQRAYIRDTENAEDLQFVSRG

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Biomedical Sciences Research Center "Alexander Fleming"
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