NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F105680

Metagenome / Metatranscriptome Family F105680

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F105680
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 46 residues
Representative Sequence MELPFGETLPRGGYVVHVDAVGEVAARNLIYRERMQTPGPLQVAVGP
Number of Associated Samples 89
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.00 %
% of genes near scaffold ends (potentially truncated) 99.00 %
% of genes from short scaffolds (< 2000 bps) 95.00 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction Yes
3D model pTM-score0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (96.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(12.000 % of family members)
Environment Ontology (ENVO) Unclassified
(28.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(60.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 4.00%    β-sheet: 29.33%    Coil/Unstructured: 66.67%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.49
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF00027cNMP_binding 17.00
PF13545HTH_Crp_2 12.00
PF01408GFO_IDH_MocA 7.00
PF03625DUF302 5.00
PF07978NIPSNAP 3.00
PF02894GFO_IDH_MocA_C 3.00
PF01120Alpha_L_fucos 2.00
PF02656DUF202 2.00
PF00069Pkinase 2.00
PF02687FtsX 2.00
PF06026Rib_5-P_isom_A 2.00
PF00072Response_reg 1.00
PF00456Transketolase_N 1.00
PF00795CN_hydrolase 1.00
PF16757Fucosidase_C 1.00
PF00440TetR_N 1.00
PF00596Aldolase_II 1.00
PF02321OEP 1.00
PF12838Fer4_7 1.00
PF02706Wzz 1.00
PF00325Crp 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 8.00
COG3439Uncharacterized conserved protein, DUF302 familyFunction unknown [S] 5.00
COG0673Predicted dehydrogenaseGeneral function prediction only [R] 3.00
COG0120Ribose 5-phosphate isomeraseCarbohydrate transport and metabolism [G] 2.00
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 2.00
COG2149Uncharacterized membrane protein YidH, DUF202 familyFunction unknown [S] 2.00
COG3669Alpha-L-fucosidaseCarbohydrate transport and metabolism [G] 2.00
COG0021TransketolaseCarbohydrate transport and metabolism [G] 1.00
COG3206Exopolysaccharide export protein/domain GumC/Wzc1Cell wall/membrane/envelope biogenesis [M] 1.00
COG3524Capsule polysaccharide export protein KpsE/RkpRCell wall/membrane/envelope biogenesis [M] 1.00
COG3765LPS O-antigen chain length determinant protein, WzzB/FepE familyCell wall/membrane/envelope biogenesis [M] 1.00
COG3944Capsular polysaccharide biosynthesis protein YveKCell wall/membrane/envelope biogenesis [M] 1.00
COG3959Transketolase, N-terminal subunitCarbohydrate transport and metabolism [G] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.00 %
UnclassifiedrootN/A4.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001356|JGI12269J14319_10251004All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300001546|JGI12659J15293_10122968All Organisms → cellular organisms → Bacteria → Acidobacteria564Open in IMG/M
3300004092|Ga0062389_100753885All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1150Open in IMG/M
3300004152|Ga0062386_100953728All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae710Open in IMG/M
3300004631|Ga0058899_11207331All Organisms → cellular organisms → Bacteria1318Open in IMG/M
3300005332|Ga0066388_107222014All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300005437|Ga0070710_11293885All Organisms → cellular organisms → Bacteria → Acidobacteria542Open in IMG/M
3300005451|Ga0066681_10278831All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1019Open in IMG/M
3300005530|Ga0070679_100347501All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1431Open in IMG/M
3300005534|Ga0070735_10826284All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae545Open in IMG/M
3300005541|Ga0070733_10113806All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1735Open in IMG/M
3300005541|Ga0070733_10854479All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae611Open in IMG/M
3300005569|Ga0066705_10558338All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300005712|Ga0070764_10465684All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300005764|Ga0066903_107656065Not Available556Open in IMG/M
3300005876|Ga0075300_1011477All Organisms → cellular organisms → Bacteria1017Open in IMG/M
3300005879|Ga0075295_1004544All Organisms → cellular organisms → Bacteria1242Open in IMG/M
3300006162|Ga0075030_100584718All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium886Open in IMG/M
3300006174|Ga0075014_100172840All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1072Open in IMG/M
3300006174|Ga0075014_100877566All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6535Open in IMG/M
3300006175|Ga0070712_101072093All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300006800|Ga0066660_11480879All Organisms → cellular organisms → Bacteria → Acidobacteria534Open in IMG/M
3300009093|Ga0105240_10337797All Organisms → cellular organisms → Bacteria1712Open in IMG/M
3300009520|Ga0116214_1004100All Organisms → cellular organisms → Bacteria5293Open in IMG/M
3300009618|Ga0116127_1144774All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300009628|Ga0116125_1154868All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300009839|Ga0116223_10124155All Organisms → cellular organisms → Bacteria1618Open in IMG/M
3300010048|Ga0126373_10578776All Organisms → cellular organisms → Bacteria1173Open in IMG/M
3300010048|Ga0126373_13286959All Organisms → cellular organisms → Bacteria → Acidobacteria503Open in IMG/M
3300010360|Ga0126372_11631192All Organisms → cellular organisms → Bacteria → Acidobacteria684Open in IMG/M
3300010366|Ga0126379_11315248All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300010376|Ga0126381_100879372All Organisms → cellular organisms → Bacteria1289Open in IMG/M
3300010376|Ga0126381_101481126All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium981Open in IMG/M
3300010376|Ga0126381_102442310All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300010376|Ga0126381_104839582All Organisms → cellular organisms → Bacteria → Acidobacteria517Open in IMG/M
3300010398|Ga0126383_12670776All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300011090|Ga0138579_1082976All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300011120|Ga0150983_11478694All Organisms → cellular organisms → Bacteria → Acidobacteria646Open in IMG/M
3300012211|Ga0137377_11793512All Organisms → cellular organisms → Bacteria → Acidobacteria533Open in IMG/M
3300013100|Ga0157373_10407615All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium975Open in IMG/M
3300013100|Ga0157373_10928669All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300014200|Ga0181526_10994389All Organisms → cellular organisms → Bacteria → Acidobacteria527Open in IMG/M
3300016387|Ga0182040_10894820All Organisms → cellular organisms → Bacteria736Open in IMG/M
3300016422|Ga0182039_10139480All Organisms → cellular organisms → Bacteria1860Open in IMG/M
3300017927|Ga0187824_10274297All Organisms → cellular organisms → Bacteria → Acidobacteria591Open in IMG/M
3300017932|Ga0187814_10404863All Organisms → cellular organisms → Bacteria → Acidobacteria532Open in IMG/M
3300017943|Ga0187819_10059249All Organisms → cellular organisms → Bacteria2274Open in IMG/M
3300017961|Ga0187778_10476372All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300017974|Ga0187777_10010294All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5901Open in IMG/M
3300017975|Ga0187782_10350263All Organisms → cellular organisms → Bacteria1118Open in IMG/M
3300018007|Ga0187805_10097856All Organisms → cellular organisms → Bacteria → Acidobacteria1326Open in IMG/M
3300018038|Ga0187855_10351450All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium860Open in IMG/M
3300018043|Ga0187887_10363676All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300018062|Ga0187784_11091023All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300018085|Ga0187772_10701840All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300018088|Ga0187771_11490997All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300021088|Ga0210404_10181518All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1120Open in IMG/M
3300021180|Ga0210396_11750679All Organisms → cellular organisms → Bacteria → Acidobacteria503Open in IMG/M
3300021181|Ga0210388_10491617All Organisms → cellular organisms → Bacteria1077Open in IMG/M
3300021402|Ga0210385_10435918All Organisms → cellular organisms → Bacteria988Open in IMG/M
3300021402|Ga0210385_10564134All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium866Open in IMG/M
3300021403|Ga0210397_10271703All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1237Open in IMG/M
3300021432|Ga0210384_11622967All Organisms → cellular organisms → Bacteria → Acidobacteria552Open in IMG/M
3300021475|Ga0210392_10258374All Organisms → cellular organisms → Bacteria1236Open in IMG/M
3300021478|Ga0210402_11972271Not Available510Open in IMG/M
3300021479|Ga0210410_10604822All Organisms → cellular organisms → Bacteria → Acidobacteria973Open in IMG/M
3300021559|Ga0210409_10140563All Organisms → cellular organisms → Bacteria2215Open in IMG/M
3300025898|Ga0207692_10918454All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300025915|Ga0207693_11194319All Organisms → cellular organisms → Bacteria → Acidobacteria574Open in IMG/M
3300025921|Ga0207652_10535193All Organisms → cellular organisms → Bacteria1053Open in IMG/M
3300026011|Ga0208532_1003864All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300026555|Ga0179593_1063278Not Available2656Open in IMG/M
3300027432|Ga0209421_1088327All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300027562|Ga0209735_1008804All Organisms → cellular organisms → Bacteria1922Open in IMG/M
3300027575|Ga0209525_1147695All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300027660|Ga0209736_1122708All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300027674|Ga0209118_1058200Not Available1131Open in IMG/M
3300027727|Ga0209328_10075498All Organisms → cellular organisms → Bacteria1031Open in IMG/M
3300027854|Ga0209517_10426536All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300027867|Ga0209167_10294960All Organisms → cellular organisms → Bacteria876Open in IMG/M
3300027908|Ga0209006_10309874All Organisms → cellular organisms → Bacteria1345Open in IMG/M
3300027911|Ga0209698_10882909All Organisms → cellular organisms → Bacteria → Acidobacteria671Open in IMG/M
3300028906|Ga0308309_10308243All Organisms → cellular organisms → Bacteria1340Open in IMG/M
3300031231|Ga0170824_118124125All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium528Open in IMG/M
3300031525|Ga0302326_10552570All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1727Open in IMG/M
3300031718|Ga0307474_10627244All Organisms → cellular organisms → Bacteria → Acidobacteria848Open in IMG/M
3300031823|Ga0307478_11700137All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6520Open in IMG/M
3300031962|Ga0307479_10438004All Organisms → cellular organisms → Bacteria1292Open in IMG/M
3300031962|Ga0307479_10866739All Organisms → cellular organisms → Bacteria876Open in IMG/M
3300031996|Ga0308176_11296207All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300032044|Ga0318558_10569529All Organisms → cellular organisms → Bacteria → Acidobacteria566Open in IMG/M
3300032076|Ga0306924_10772914All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1073Open in IMG/M
3300032160|Ga0311301_10645492All Organisms → cellular organisms → Bacteria1508Open in IMG/M
3300032160|Ga0311301_11199143All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium973Open in IMG/M
3300032180|Ga0307471_100327210All Organisms → cellular organisms → Bacteria1633Open in IMG/M
3300032180|Ga0307471_100745077All Organisms → cellular organisms → Bacteria1145Open in IMG/M
3300032261|Ga0306920_104392147All Organisms → cellular organisms → Bacteria → Acidobacteria506Open in IMG/M
3300032421|Ga0310812_10059932All Organisms → cellular organisms → Bacteria1489Open in IMG/M
3300032828|Ga0335080_10623892All Organisms → cellular organisms → Bacteria1131Open in IMG/M
3300032955|Ga0335076_10638452All Organisms → cellular organisms → Bacteria946Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil12.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil10.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil9.00%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil7.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil6.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland6.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment4.00%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds4.00%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.00%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil3.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.00%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland2.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.00%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.00%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.00%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.00%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300001546Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005876Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401EnvironmentalOpen in IMG/M
3300005879Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009618Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100EnvironmentalOpen in IMG/M
3300009628Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10EnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011090Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017927Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4EnvironmentalOpen in IMG/M
3300017932Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026011Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301 (SPAdes)EnvironmentalOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300027432Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027562Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027575Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027660Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027727Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12269J14319_1025100413300001356Peatlands SoilLPRGTLEEELRFGETLPNGGYLVNVDAVGEVEARNLIYRQRMVTPRPLNVNVGP*
JGI12659J15293_1012296823300001546Forest SoilGGYMVHVDAVGEVAAKNLIYRERMQTPGPLHVNVGP*
Ga0062389_10075388513300004092Bog Forest SoilAKELPFGENLPHGGYVIHVDAVGEVAPKNLIYRERLQTPGALQVTMGP*
Ga0062386_10095372823300004152Bog Forest SoilTMAMELPFGETLPHGGYVIHVDAVGEVAKKKLIYREYLETPAPLQVTVGP*
Ga0058899_1120733133300004631Forest SoilVLRRGTTAMELPFGETLPHGGYVVHVDAVGEVAPKNLIYRERLQTP
Ga0066388_10722201423300005332Tropical Forest SoilTLPRGGYVVHVDAVGEVTPKNVIYRQRMQTPEPLQVMTGP*
Ga0070710_1129388523300005437Corn, Switchgrass And Miscanthus RhizosphereQRFMLRRGTVEQELPFGETLPHGGYVVHVDAVGEVAAKNLIYRDRLQTPGALQVSVGP*
Ga0066681_1027883123300005451SoilYQRLVLRRGMLEQELPFGETLPRGSYVVHVDAVGEVAAKNLIYRDRMQTPGALQVSVGP*
Ga0070679_10034750133300005530Corn RhizosphereEQELPFGETLPRGGYVVHVDAVGEVAAKNLIYRDRLQTPGELQVSVGP*
Ga0070735_1082628423300005534Surface SoilMELPFGETLPRGGYVVHVDAVGEVAARNLIYRERMQTPGPLQVAVGP*
Ga0070733_1011380613300005541Surface SoilPRGGYVVHVDAVGEVAAKRLIYRDRMQTPSALQVTVGP*
Ga0070733_1085447913300005541Surface SoilTLPPGAYVVHVDAVGEVAPKRYIYRERMQMPKPLRVIVGP*
Ga0066705_1055833813300005569SoilPFGETLPRDGYVVHVDAVGEVPARNIIYRERMQTPSMLQVAVGP*
Ga0070764_1046568423300005712SoilHGGYIVHVDAVGEVAAKNVIYREKMDTKALQVVVGP*
Ga0066903_10765606523300005764Tropical Forest SoilGYVVRVDAIGEVSPKNVIYREYLQTASALQVTVGP*
Ga0075300_101147723300005876Rice Paddy SoilGYVVHVDAVGEVSPKNLIYRDRMQTPGQLQVMVGP*
Ga0075295_100454413300005879Rice Paddy SoilPHGGYVVHVDAVGEVSPKNLIYRDRMQTPGQLQVMVGP*
Ga0075030_10058471823300006162WatershedsSKELPFGETLPHGGYVVRVDAVGEVAPKNLIYRENLQTPSALQVVVGP*
Ga0075014_10017284023300006174WatershedsQELPFGETLPRGGYVVHVDAVGEVPAKNIIYRERMQTPSMLQVPVGP*
Ga0075014_10087756613300006174WatershedsYVVHVDAIGEVETRKLIYRERLKTPAPMQVAVGP*
Ga0070712_10107209313300006175Corn, Switchgrass And Miscanthus RhizosphereVLRRGAVEQELPFGETLPGGGYVVHVDAVGEVAAKSLIYRDRLQTPGALQVSVGP*
Ga0066660_1148087913300006800SoilGGYVVHVDAVGEVAAKNLIYRERMETQGPLQVTVGP*
Ga0105240_1033779713300009093Corn RhizosphereLPRGGYVVHVDAVGEVPAKNLIYRDRLQTPGALQVTLGP*
Ga0116214_100410083300009520Peatlands SoilYLVNVDAVGEVEARNLIYRQRMVTPRPLNVNVGP*
Ga0116127_114477423300009618PeatlandETLPHGGYVVHVDAVGEVAPKNLIYREQMQTPSALQVTVGP*
Ga0116125_115486823300009628PeatlandPHGGYVIHVDVVGEVVPKKLIYRERMQTPGPLQVNVGP*
Ga0116223_1012415533300009839Peatlands SoilVAKELPFGETLPHGGYVVHVDAVGEVPPRNLIYRVDMKTPGPLQVTVGP*
Ga0126373_1057877613300010048Tropical Forest SoilRGGTAAMELPFGDTLPHGGYVVHVDAVGEVPPKNLIYRDRMETPTALQVTVGP*
Ga0126373_1328695913300010048Tropical Forest SoilLPFGETLPRGGYVVHVDAIGEVPPRNVIYRERMQTPSALQVNVGP*
Ga0126372_1163119213300010360Tropical Forest SoilLPFGETLPRGGYVVHVDAVGEVAARNVIYRERLQTPSMLQVAVGP*
Ga0126379_1131524823300010366Tropical Forest SoilRRGTLSQELPFGETLPRGGYVVHVDAVGEVAARNVIYRERLQTPSMLQVAVGP*
Ga0126381_10087937213300010376Tropical Forest SoilGTLGQELPFGDTLPHGAYVVHVDAVGEVAAKNVIYRERMQTPSMLQVNVGP*
Ga0126381_10148112623300010376Tropical Forest SoilGTPAMELPFGDTLPHGGYVVHVDAVGEVAPKNLIYRDRMVTPSALQVTVGP*
Ga0126381_10244231013300010376Tropical Forest SoilGTPAMELPFGDTLPHGGYVVHVDAVGEVAPKNLIYRDRMVTPTTLQVTVGP*
Ga0126381_10483958213300010376Tropical Forest SoilLRRGTFDMELPFGDTLSRGGYVVHVDAIGEVAPRNVIYRERMQTPSALQVNVGP*
Ga0126383_1267077623300010398Tropical Forest SoilPFGETLPHGGYVVHVDAVGEVTARNVIHRQRLETLSPLQVTVGP*
Ga0138579_108297623300011090Peatlands SoilEEELRFGETLPNGGYLVNLDAVGEVEARNLIYRQRMVTPRPLNVNVGP*
Ga0150983_1147869423300011120Forest SoilVAKELPFGETLPHGGYVVNVDAVGEVAPRKLIYRADLKTPGPLQVTVGP*
Ga0137377_1179351213300012211Vadose Zone SoilVGQELPFGETLPRDGYVVHVDAVGEVPARNIIYRERMQTPSMLQVAVGP*
Ga0157373_1040761513300013100Corn RhizosphereHGGYVVHVDAVGEVSPKNLIYRDRIQTPGQLQVAMGP*
Ga0157373_1092866913300013100Corn RhizosphereQELPFGETLPRGGYVVHVDAVGEVAAKNLIYRDRLQTPGELQVSVGP*
Ga0181526_1099438913300014200BogMELPFGETLPHGGYVVHVDAVGEVAAKNLIYREYLETPGPLQVMVGP*
Ga0182040_1089482023300016387SoilLPHGGYVVHVDAIGEVAARNVIYRERMQTPSMLQVTVGP
Ga0182039_1013948013300016422SoilLAQELPFGETLPRGGYVVHVDAVGEVPPRNVIYRERMQTPTMLQVAVGP
Ga0187824_1027429713300017927Freshwater SedimentIAKELPFGETLPRGGYVVHVDVVGEVAAKKQIYRERLQTPSALQVTATP
Ga0187814_1040486323300017932Freshwater SedimentMELPFGENLPHGGYTIYVDAVGEVIPKNVIYREQMQTQSQLHVTVGP
Ga0187819_1005924913300017943Freshwater SedimentPRGGYVVHVDAVGEVAARNVIYRERMQTPSMLQVTVGP
Ga0187778_1047637223300017961Tropical PeatlandAKELPFGETLPHGGYVVHVDAIGEVIPRKLIYRERLQTGGPLQVTVGP
Ga0187777_1001029413300017974Tropical PeatlandKKELPFGETLPRGGYVVHVDAIGEVEAKNLIYRERMATPRPLTVAVE
Ga0187782_1035026323300017975Tropical PeatlandPHGGYVVHVDAVGEVVPQKLIYRERMQTAGALQVTVGP
Ga0187805_1009785633300018007Freshwater SedimentTLPRGGYVVHVDAVGEVAPKNLIYRERMETPGPLQVTIGP
Ga0187855_1035145023300018038PeatlandGYVIHVDVVGEVVPKKLIYRERMQTPGPLQVNVGP
Ga0187887_1036367613300018043PeatlandKTVELPFGESLPRGGYKVHVDAVGEVAAKKVIYREYLDAPGQLQVTAQ
Ga0187784_1109102323300018062Tropical PeatlandFGDTLPHGGYVVHVDAVGEVPPKNLIYRDWMETPAALQVTVGP
Ga0187772_1070184023300018085Tropical PeatlandFVLRRGTIAKELPFGETLPHGGYVVHVNAVGEVAPKKLIYRDRLQTPGALQVTVGP
Ga0187771_1149099713300018088Tropical PeatlandLRRGTIDRELPFGDTLPRGGYVVHVDAVGEVVPKKMIYRERMQTQGPLQVNIGP
Ga0210404_1018151813300021088SoilGTIAKELPFGETLPHGGYVVHVDAVGEVAAKNLIYREKMDTPAPLQVVVGP
Ga0210396_1175067913300021180SoilLPRGGYVVHVDAVGEVPARNIIYRERMQTPSMLQVAVGP
Ga0210388_1049161713300021181SoilMELPFGENLPHGGYIVHVDAVGEVAAKNVIYREKMDTKALQVVVGP
Ga0210385_1043591823300021402SoilPFGETLPHGGYEIHVDVVGEVAPRNLIYRDRLQTPGQLQVTVGP
Ga0210385_1056413413300021402SoilPFGETLPYGKYKVHVDAVGEVAPKNLIYREYLETPAPLEVTVGP
Ga0210397_1027170313300021403SoilETLPHGGYVVHVDAVGEVAARNLIYRQRMETPGQLQVTVGP
Ga0210384_1162296713300021432SoilAMELPFGETLPRGGYVVHVDAVGEVAPRNLIYRERMQTPGPLQVAVGP
Ga0210392_1025837423300021475SoilPHGGYVVHVDAVGEVAPKNLIYRANMQTPSALQVTVGP
Ga0210402_1197227123300021478SoilRGGYVVHVDVIGEVAPKNVIHRQRLQTPGALQVAVGP
Ga0210410_1060482213300021479SoilGETLPHGGYVVHVDAVGEVAPRKLIYRADLKTPGPLQVTVGP
Ga0210409_1014056313300021559SoilDTLAHGGYVVHVDAVGEVGKRNLIYRERLQTPRPLQVTVGP
Ga0207692_1091845413300025898Corn, Switchgrass And Miscanthus RhizosphereGGYVVHVDAVGEVAARNLIYRERMQTPGPLQVAVGP
Ga0207693_1119431913300025915Corn, Switchgrass And Miscanthus RhizosphereVLRRGAVEQELPFGETLPGGGYVVHVDAVGEVAAKSLIYRDRLQTPGALQVSVGP
Ga0207652_1053519313300025921Corn RhizosphereEQELPFGETLPRGGYVVHVDAVGEVAAKNLIYRDRLQTPGELQVSVGP
Ga0208532_100386423300026011Rice Paddy SoilPHGGYVVHVDAVGEVSPKNLIYRDRMQTPGQLQVMVGP
Ga0179593_106327843300026555Vadose Zone SoilMELPFGETLPRGGYVVHVDAVGEVAQRNLDLLYRERMQTAGPVAGGSPARR
Ga0209421_108832723300027432Forest SoilPGTQAVELPFGETLPYGRYKVHLDAVGEVAPKKVIYREHLDTPGALQVTVGP
Ga0209735_100880413300027562Forest SoilPFGETLPPGGYVVHVDAVGEVAAQKLIYRERLQTPAPLRVTVGP
Ga0209525_114769523300027575Forest SoilLLKRGTVAMELPFGENLPHGGYIVHVDAVGEVAAKNVIYREKMDTKALQVVVGP
Ga0209736_112270813300027660Forest SoilKELPFGETLPPGGYVVHVDTVGELAAQKLIYRERLQTPSALQVTVGP
Ga0209118_105820013300027674Forest SoilRQGTIAKELPFGETLPHGGYVVHVDAVGEVPLKRLIYRERMVTPSALQVVVGP
Ga0209328_1007549823300027727Forest SoilVRGTVAKELPFGETLPPGGYGVHVDAVGEVASKNVIYRQRMETPSALQVVAGT
Ga0209517_1042653623300027854Peatlands SoilTIGMELPFGETLPHGGYVVHVDAVGEVAPKKLIYRDRMETPRPLQVTVGP
Ga0209167_1029496013300027867Surface SoilPRGGYVVHVDAVGEVAAKRLIYRDRMQTPSALQVTVGP
Ga0209006_1030987413300027908Forest SoilTLPRGGYVIYVDAIGEVAARNLIYREHMHTPGPLQVNVGP
Ga0209698_1088290923300027911WatershedsRGTVGQELPFGETLPRGGYVVHVDAVGEVPAKNIIYRERMQTPSMLQLPVGP
Ga0308309_1030824313300028906SoilKNGTVGMELPFGETLPHGGYVIHVDAVGEVAARNLIYRDRMQAPGPLQVTVGP
Ga0170824_11812412523300031231Forest SoilELPFGETLPHGGYVIHVDAVGEVAAKNLIFRDRMQTPGPLQVTVGP
Ga0302326_1055257023300031525PalsaMLTRGTVAKELPFGEILPHGGYVIHVDAVGEVAARNLIYRERLQTPGALQVTLGP
Ga0307474_1062724413300031718Hardwood Forest SoilVLAGRGTTKELPFGETLPHGGYVVHVDAVGEVAKFNKIYRQRMQTAALQVTVGP
Ga0307478_1170013713300031823Hardwood Forest SoilGETLPNGGYAVHVDAVGEVAARNLIYRDKLDTPEPLQVAVRP
Ga0307479_1043800413300031962Hardwood Forest SoilFMLRRGTIAKELPFGETLPPGGYVVHVDTVGEVAAQKLIYRERLQTPAPLRVIVGP
Ga0307479_1086673923300031962Hardwood Forest SoilPRGGYVVHVDAVGEVPARNIIYRERMQTPSMLQVAVGP
Ga0308176_1129620723300031996SoilHRGTVGKELPFGETLPHGGYVVHVDAVGEVSPKNLIYRDRMQTAGQLQVTVGP
Ga0318558_1056952913300032044SoilGTLAQELPFGETLPRGGYVVHVDAVGEVPPRNVIYRERMQTPTMLQVAVGP
Ga0306924_1077291423300032076SoilHFVLRRGTLAQELPFGETLPRGGYVVHVDAVGEVPPRNVIYRERMQTPTMLQVAVGP
Ga0311301_1064549213300032160Peatlands SoilFLLRKQTLKKELPFGDTLPRGGYVVHVDAVGEVESKKLIYRERMQTPEALQVMVGP
Ga0311301_1119914313300032160Peatlands SoilTQAVELPFGETLPYGRYKVHVDAVGEVAARKLIYREYLETPGPLQVTVGP
Ga0307471_10032721013300032180Hardwood Forest SoilPRGRYIVHVDAVGEDLVKKKIYRARLQTHGALSVP
Ga0307471_10074507713300032180Hardwood Forest SoilRGTVDKELPFGETLPHGGYVVHVDAVGEVAAKNIIYRERMQTPSMLQVTVGP
Ga0306920_10439214723300032261SoilGETLPRGGYVVHVDAVGEVAARNVIYRERLQTPSMLQVAVGP
Ga0310812_1005993223300032421SoilIGYQRFVLRRGTLEQELPFGEALPRGSYVVHVDAVGEVGAKNLIYRDRLQTPGALQVSVG
Ga0335080_1062389213300032828SoilMELPFGETLPRGGYVVHVDAIGEVAARNVIHRQRLQTPAALQVAVGP
Ga0335076_1063845223300032955SoilFGDTLPQGTYVVHVDAVGEVAAKKLIYRDRLQSQSLQVMIGP

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.