NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F105803

Metagenome Family F105803

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F105803
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 80 residues
Representative Sequence VQALSFIPIPDQLITYLVQKAPEGLLTWYRDDRIMVVNLNDWMPPGVDLSLERTVFEEGALTLHLAAGSYDVTDILGEDFGQPGN
Number of Associated Samples 91
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.08 %
% of genes near scaffold ends (potentially truncated) 93.00 %
% of genes from short scaffolds (< 2000 bps) 88.00 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (84.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(9.000 % of family members)
Environment Ontology (ENVO) Unclassified
(37.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 16.81%    β-sheet: 22.12%    Coil/Unstructured: 61.06%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF14067LssY_C 32.00
PF09997DUF2238 22.00
PF00850Hist_deacetyl 15.00
PF01804Penicil_amidase 10.00
PF00069Pkinase 2.00
PF03190Thioredox_DsbH 1.00
PF07676PD40 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0123Acetoin utilization deacetylase AcuC or a related deacetylaseSecondary metabolites biosynthesis, transport and catabolism [Q] 30.00
COG2366Acyl-homoserine lactone (AHL) acylase PvdQSecondary metabolites biosynthesis, transport and catabolism [Q] 10.00
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 8.00
COG1331Uncharacterized conserved protein YyaL, SSP411 family, contains thoiredoxin and six-hairpin glycosidase-like domainsGeneral function prediction only [R] 1.00


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms86.00 %
UnclassifiedrootN/A14.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908032|Perma_A_C_ConsensusfromContig129960All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium766Open in IMG/M
3300002077|JGI24744J21845_10114624All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium501Open in IMG/M
3300004082|Ga0062384_101281848All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium535Open in IMG/M
3300004114|Ga0062593_100039221All Organisms → cellular organisms → Bacteria2816Open in IMG/M
3300005332|Ga0066388_107490987All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium548Open in IMG/M
3300005334|Ga0068869_100761648Not Available830Open in IMG/M
3300005340|Ga0070689_100503904All Organisms → cellular organisms → Bacteria → Proteobacteria1037Open in IMG/M
3300005364|Ga0070673_100340088All Organisms → cellular organisms → Bacteria1330Open in IMG/M
3300005365|Ga0070688_100122260All Organisms → cellular organisms → Bacteria1745Open in IMG/M
3300005365|Ga0070688_100562871Not Available868Open in IMG/M
3300005440|Ga0070705_101177629All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium630Open in IMG/M
3300005440|Ga0070705_101203429All Organisms → cellular organisms → Bacteria → Acidobacteria624Open in IMG/M
3300005440|Ga0070705_101904168All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota506Open in IMG/M
3300005545|Ga0070695_101130611All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium642Open in IMG/M
3300005548|Ga0070665_100672493All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1048Open in IMG/M
3300005548|Ga0070665_101207292Not Available767Open in IMG/M
3300005576|Ga0066708_10009865All Organisms → cellular organisms → Bacteria4441Open in IMG/M
3300005617|Ga0068859_102913744All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae524Open in IMG/M
3300005719|Ga0068861_102029968Not Available574Open in IMG/M
3300005764|Ga0066903_100986285All Organisms → cellular organisms → Bacteria → Proteobacteria1538Open in IMG/M
3300006058|Ga0075432_10155854All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium880Open in IMG/M
3300006172|Ga0075018_10485892All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium641Open in IMG/M
3300006755|Ga0079222_10861320Not Available752Open in IMG/M
3300006852|Ga0075433_11700155All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium543Open in IMG/M
3300006881|Ga0068865_100817232All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium805Open in IMG/M
3300009012|Ga0066710_102493114All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium748Open in IMG/M
3300009053|Ga0105095_10204452All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1082Open in IMG/M
3300009087|Ga0105107_10748924All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium680Open in IMG/M
3300009088|Ga0099830_11308180All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium602Open in IMG/M
3300009143|Ga0099792_10713148All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium650Open in IMG/M
3300009153|Ga0105094_10351813All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium851Open in IMG/M
3300010043|Ga0126380_10289215All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1159Open in IMG/M
3300010360|Ga0126372_12731912All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium546Open in IMG/M
3300010398|Ga0126383_12130634All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium648Open in IMG/M
3300010400|Ga0134122_10724878All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium938Open in IMG/M
3300010400|Ga0134122_11797743All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium644Open in IMG/M
3300010401|Ga0134121_10968317All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium832Open in IMG/M
3300011119|Ga0105246_11233542All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium690Open in IMG/M
3300011269|Ga0137392_11405017All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium557Open in IMG/M
3300012208|Ga0137376_11166672All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium658Open in IMG/M
3300012354|Ga0137366_10078562All Organisms → cellular organisms → Bacteria2511Open in IMG/M
3300012532|Ga0137373_10061901All Organisms → cellular organisms → Bacteria3422Open in IMG/M
3300012931|Ga0153915_11240152All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium871Open in IMG/M
3300012948|Ga0126375_10475516All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium925Open in IMG/M
3300012988|Ga0164306_11766165All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300012989|Ga0164305_11447203Not Available607Open in IMG/M
3300013100|Ga0157373_11281285All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium554Open in IMG/M
3300013102|Ga0157371_11512810All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium524Open in IMG/M
3300013306|Ga0163162_10007024All Organisms → cellular organisms → Bacteria10923Open in IMG/M
3300014969|Ga0157376_10096161All Organisms → cellular organisms → Bacteria2577Open in IMG/M
3300015080|Ga0167639_1008186All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1523Open in IMG/M
3300016422|Ga0182039_12017017All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium531Open in IMG/M
3300017959|Ga0187779_10972213All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300018076|Ga0184609_10057244All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1677Open in IMG/M
3300018084|Ga0184629_10191408Not Available1054Open in IMG/M
3300021432|Ga0210384_10776404All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium855Open in IMG/M
3300021445|Ga0182009_10200061All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium972Open in IMG/M
3300021560|Ga0126371_13677402All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium517Open in IMG/M
3300025907|Ga0207645_11123407All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium529Open in IMG/M
3300025908|Ga0207643_10369085All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria903Open in IMG/M
3300025913|Ga0207695_11605844Not Available531Open in IMG/M
3300025922|Ga0207646_11837742All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium517Open in IMG/M
3300025932|Ga0207690_11782241All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium514Open in IMG/M
3300025942|Ga0207689_10636239All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium898Open in IMG/M
3300025981|Ga0207640_10166614All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1637Open in IMG/M
3300026023|Ga0207677_10443931Not Available1110Open in IMG/M
3300026095|Ga0207676_10549219All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1103Open in IMG/M
3300027874|Ga0209465_10491046All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Noelaerhabdaceae → Emiliania → Emiliania huxleyi613Open in IMG/M
3300027907|Ga0207428_10835084All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium653Open in IMG/M
3300027915|Ga0209069_10638266All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium618Open in IMG/M
3300028379|Ga0268266_10698694All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium977Open in IMG/M
3300028381|Ga0268264_11009919All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium839Open in IMG/M
3300028802|Ga0307503_10660108All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → unclassified Gallionellaceae → Gallionellaceae bacterium CG1_02_60_948583Open in IMG/M
3300028803|Ga0307281_10055983All Organisms → cellular organisms → Bacteria1250Open in IMG/M
3300031170|Ga0307498_10243361All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium649Open in IMG/M
3300031549|Ga0318571_10179328All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium747Open in IMG/M
3300031572|Ga0318515_10340150All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium805Open in IMG/M
3300031712|Ga0265342_10031300All Organisms → cellular organisms → Bacteria3291Open in IMG/M
3300031720|Ga0307469_10293341All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1335Open in IMG/M
3300031736|Ga0318501_10464290All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium688Open in IMG/M
3300031740|Ga0307468_102138652All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium540Open in IMG/M
3300031770|Ga0318521_10504399All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium727Open in IMG/M
3300032008|Ga0318562_10783133All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium546Open in IMG/M
3300032044|Ga0318558_10626502Not Available537Open in IMG/M
3300032066|Ga0318514_10483219All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium659Open in IMG/M
3300032068|Ga0318553_10132411All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1285Open in IMG/M
3300032174|Ga0307470_10028277All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2632Open in IMG/M
3300032180|Ga0307471_101722234All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium780Open in IMG/M
3300032180|Ga0307471_102120819All Organisms → cellular organisms → Bacteria → Acidobacteria707Open in IMG/M
3300032180|Ga0307471_102772890All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium622Open in IMG/M
3300032205|Ga0307472_101154561All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium737Open in IMG/M
3300032516|Ga0315273_10652940All Organisms → cellular organisms → Bacteria1389Open in IMG/M
3300032770|Ga0335085_11362320All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium746Open in IMG/M
3300032782|Ga0335082_10346061All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1355Open in IMG/M
3300033414|Ga0316619_11739103All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium564Open in IMG/M
3300033433|Ga0326726_11766199All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium602Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil7.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere5.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere5.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment3.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere3.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.00%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.00%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.00%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.00%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.00%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.00%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.00%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.00%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908032Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_allEnvironmentalOpen in IMG/M
3300002077Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3Host-AssociatedOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009153Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015080Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6C, Proglacial plain, adjacent to northern proglacial tributary)EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031712Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaGHost-AssociatedOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032516Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300033414Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_BEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Perma_A_C_042100602124908032SoilKVQALSFIPIPDQLLTYLVQKAPPGLLTYYPDDRIMVVSLNEWMPPGMDLSLERTVFERGALTLQFASGSYDLSGLLGAPRIDGEE
JGI24744J21845_1011462413300002077Corn, Switchgrass And Miscanthus RhizosphereIPIPDQLLTYLVDRAPAGLLTWYRPDRIMVVNLNDWMPPGVDLSLERTVFEEGALTLHLAAGSYDVTDILGEDFGQPGN*
Ga0062384_10128184813300004082Bog Forest SoilLDRVQALSFIPIPDQLLTYLVQKAPVGLLTWYRDDRIMVVNLNDWMPPGADFSLERTVFDEGKLTLHLAPGSYDLTEALGDPAIESE*
Ga0062593_10003922113300004114SoilQALSFIPIPDQLITYLVQKAPAGLLTWYRDDRIMVVNLNDWVPPGFDLSLERTVFETGALTLHFAPGSYDLTDALTGRTGRDDE*
Ga0066388_10749098713300005332Tropical Forest SoilPIPDQLLTYLVQKAPAGLLTYYPADRIMVVNLNDWLPAGMDLSLEKTVFEKEALTLQLASGSYDLSDLLGMGLSGRE*
Ga0068869_10076164823300005334Miscanthus RhizosphereLTWYRDDRIMVVNLNDWIPPGFDLSLERTVFETGALTLHFAPGSYDLTDALSGRAGRFDE
Ga0070666_1012799643300005335Switchgrass RhizosphereDRAPAGLLTWYRPDRIMVVNLNDWMPPGVDLSLERTVFEEGALTLHLAAGSYDVTDILGEDFGQPGN*
Ga0070689_10050390413300005340Switchgrass RhizosphereVQKAPQGLLTWYRDDRIMVVNLNDWVPPGFDLSLERTVFETGALTLHFAPGSYDLTDALSGRAGRFDE*
Ga0070674_10048924213300005356Miscanthus RhizosphereAGLLTWYRPDRIMVVNLNDWMPPGIDLSLERTVFEEGALTLHLAAGSYDVTDILGEEFGQPGS*
Ga0070673_10034008833300005364Switchgrass RhizosphereVQKAPQGLLTWYRDDRIMVVNLNDWIPPGFDLSLERTVFETGALTLHFAPGSYDLTDALSGRAGRFDE*
Ga0070688_10012226043300005365Switchgrass RhizosphereALSFIPIPDQLLTYLVDRAPAGLLTWYRPDRIMVVNLNDWMPPGVDLSLERTVFEEGALTLHLAAGSYDVTDILGEDFGQPGN*
Ga0070688_10056287113300005365Switchgrass RhizosphereYLVQKAPQGLLTWYRDDRIMVVNLNDWIPPGFDLSLERTVFETGALTLHFAPGSYDLTDALSGRAGRFDE*
Ga0070705_10117762913300005440Corn, Switchgrass And Miscanthus RhizosphereIPDQLLTYLVDRAPAGLLTWYRPDRIMVVNLNDWMPPGVDLSLERTVFEEGALTLHLAAGSYDVTDILGEDFGQPGN*
Ga0070705_10120342913300005440Corn, Switchgrass And Miscanthus RhizosphereKVQALSFIPIPDQILTYLVQKAPAGLLTYYAQDRIMVVNLNDWLPPGVDLSLERTVFTRGSLTLHFAEGAYDLADLLAAPRTDEEPG*
Ga0070705_10190416813300005440Corn, Switchgrass And Miscanthus RhizosphereYLVQKAPPGLLTYYANDRIMVVSLNDWMPPGMDLSLEKTIFEKGELTLQFASGSYDLSALLGAPRGTGEE*
Ga0070695_10113061123300005545Corn, Switchgrass And Miscanthus RhizosphereVQALSFIPIPDQLITYLVQKAPEGLLTWYRDDRIMVVNLNDWMPPGVDLSLERTVFEEGALTLHLAAGSYDVTDILGEDFGQPGN*
Ga0070665_10067249323300005548Switchgrass RhizosphereKDGFLAFVLDRVQALSFIPIPDQLLTYLVQKAPEGLLTWYRDDRIMVVNLNDWMPPGADFSLERTAFDEGQLTLHLSPGSYDLTEILEEGDDVE*
Ga0070665_10120729213300005548Switchgrass RhizosphereQALSFIPIPDQLITYLVQKAPEGLLTWYRDDRIMVVNLNDWIPPGFDLSLERTIFETGALTLQFAPGSYDLTDALSGRAGRFEE*
Ga0066708_1000986513300005576SoilVQALSFIPIPDQLLSYLVQRAPRGLLTYYPDDRIMVVNLAPWMPPGIDLSLERTVFAEGALTLEFGDGSYDLGLVLGDVPGASDQD*
Ga0068859_10291374413300005617Switchgrass RhizosphereQKAPAGLLTWYRDDRIMVVNLNDWVPPGFDLSLERTVFETGALTLHFAPGSYDLTDALTGRTGRDDE*
Ga0068861_10202996813300005719Switchgrass RhizospherePDQLITYLVQKAPPGLLTWYRDDRIMVVNLNDWIPAGFDLSLERTVFETGALTLQFAPGSYDLTPALTRRSDGEEE*
Ga0066903_10098628513300005764Tropical Forest SoilDQLLTYLVQKAPPGLLTYYREDRIMVVNLNDWMPPGVDLSLERTEFGQGAVTLHFAPGSYDLTGVVERIARRDDELD*
Ga0066903_10715746023300005764Tropical Forest SoilVQKAPAGLLTWFRDDRIMVVNMNDWMPPGADFSLERTVFEEGQLTLHLAPGSYDLTEALAPLESD*
Ga0075432_1015585413300006058Populus RhizosphereIPDQLVTYLVQKAPAGLLTYYAEDRIMVVNLNDWMPPGMDLSLERTEFFDGALTLHFASGSYDLTDLIENATRLDD*
Ga0075018_1048589223300006172WatershedsPIPDQLLTYLVQKAPEGLLTWYRDDRIMVVNLNDWMPPGIDLSLERTIFERGKLTLQFASGSYDLSDFLRDASSITGSV*
Ga0079222_1086132023300006755Agricultural SoilDQLITYLVQKAPEGLLTWYRDDRIMVVNLNDWVPAGVDLSLERTVFETGALTLQFAPGSYDLTGALTRRHGRDDE*
Ga0075433_1170015523300006852Populus RhizosphereFIPIPDQLITYLVQKAPAGLLTWYRDDRIMVVNLNDWMPPGVDLSLERTQFEQGALTLHFAPGSYNLTGLLQDDTYRD*
Ga0068865_10081723223300006881Miscanthus RhizosphereKDGFLAFVLEKVQALSFIPIPDQLLTYLVQKAPPGLLTYYSNDRIMVVSLNDWMPPGIDLSLEKTIFEKGALTLQFASGSYDLSGLLGAPRGAGE*
Ga0066710_10249311423300009012Grasslands SoilDGFLAFVLDKVQALSFIPIPDQLLVYLVRKAPPGLLTYYRDDRIMVVNLNDWMPPGIDLSLERTIFEEGALTMQFAPGSYDLSEILGESFDDPE
Ga0105095_1020445213300009053Freshwater SedimentVGGRVLDRVQALSFIPIPDQLLTYVVERAPEGLLTWYRDDRIMVVNLTDWMPPGIDLSLERTVFEEGALTLHLASGSYNLDEILADSF*
Ga0105107_1074892423300009087Freshwater SedimentQALSFIPIPDQLLTYVVERAPEGLLTWYRDDRIMVVNLTDWMPPGIDLSLERTVFEEGALTLHLAPGSYNLDEILADSF*
Ga0099830_1130818013300009088Vadose Zone SoilFMLEKVQALSFIPIPDQLLTFLTQKAPPGLLTYYAQDRIMVVNLNNRMPRGVDLSLEATLFEKGALVLQFAGGSYDFSDLLDDFPEVEE*
Ga0099792_1071314823300009143Vadose Zone SoilVQALSFIPIPDQLLTYLVQKAPPGLLTYYANDRIMVVSLNDWMPPGMDLSLEKTIFEKEALTLQFASGSYDLAGLIGAPRGAGE*
Ga0105094_1035181333300009153Freshwater SedimentFVLDRVQALSFIPIPDQLLTYVVERAPEGLLTWYRDDRIMVVNLTDWMPPGIDLSLERTVFEEGALTLHLASGSYNLDEILADSF*
Ga0126380_1028921513300010043Tropical Forest SoilIPDQLLTYLVQKAPAGLLTYYPADRIMVVNLNDWLPPGMDLSLEKTVFEKGALTLQFASGSYDLSDLLGTGASGRG*
Ga0126372_1273191223300010360Tropical Forest SoilSFIPIPDQLLTYLVQKAPAGLLTYYPADRIMVVNLNDWLPAGMDLSLEKTVFEKEALTLQLASGSYDLSDLLGMGLSGRE*
Ga0126383_1213063423300010398Tropical Forest SoilGFLAFVLEKVQALSFIPIPDQLLTYLVQKAPRGLLTYYAADRIMVVNLNDWLPPGIDLSLEKTIFERGALTLQFASGSYDLSDLLGISPAGG*
Ga0134122_1072487823300010400Terrestrial SoilVQALSFIPIPDQLLTYLVDRAPAGLLTWYRPDRIMVVNLNDWMPPGVDLSLERTVFEEGALTLHLAAGSYDVTDILGEDFGQPGN*
Ga0134122_1179774323300010400Terrestrial SoilLTYLVQKAPPGLLTYYREDRIMVVSLNEWMPPGIDLSLEKTVFERGALTLQFASGSYDLSGLLGSPLRAVEE*
Ga0134121_1096831723300010401Terrestrial SoilGFLAFVLEKVQALSFIPIPDQLLTYLVQKAPPGLLTYYANDRIMVVSLNDWMPPGIDLSLEKTIFEKEALTLQFASGSYDLSGLLGTPPAAGE*
Ga0105246_1123354213300011119Miscanthus RhizosphereDQLLTYLVERAPAGLLTWYRPDRIMVVNLNDWMPPGVDLSLERTVFEEGALTLHLAAGSYDVTDILGEDFGQPGN*
Ga0137392_1140501723300011269Vadose Zone SoilVQALSFIPIPDQLLSYLVAKAPPGLLTYYAQDRIMVVNLNDWMPPGVDLSLERTVFERGALTLHFAAGSYDLTQVLEADWEGEE*
Ga0137376_1116667213300012208Vadose Zone SoilVQALSFIPIPDQLLTYLVQKAPPGLLTYYANDRIMVVSLNDWMPPGMDLSLEKTIFEKEALTLQFASGSYDLSGLIGAPRGAGE*
Ga0137366_1007856243300012354Vadose Zone SoilLLTYLVAKAPEGLLTYYPEDRIMVVNLNEWTPPGVDLSLERTVFEKGALTLQFASGSYDLSGLLGFSPND*
Ga0137373_1006190113300012532Vadose Zone SoilIPIPDQLLTYLVAKAPEGLLTYYPEDRIMVVNLNEWTPPGMDLSLERTVFEKGALTLQFASGSYDLSALLGSSPND*
Ga0153915_1124015213300012931Freshwater WetlandsGFLAFVLDRVQALSFIPIPDQLLHYLVQKAPPGLLTYYPEDRIMVVNLNDWMPPGVDLALERTQFDTGALTLHFASGSYDLTGLLRRSLREDD*
Ga0126375_1047551613300012948Tropical Forest SoilIPIPDQLLTYLVQKAPRGLLTYYAADRIMVVNLNDWLPPGIDLSLERTIFEKGTLTLQFASGAYDLSDLLGISRAGG*
Ga0164306_1176616513300012988SoilLSFIPIPDQLITYLVQKAPPGLLTWYRDDRIMVVNLNDWVPPGFDLSLERTVFETGALTLQFAPGSYDLTDALSGRAGRFDE*
Ga0164305_1144720323300012989SoilLITYLVQKAPQGLLTWYRDDRIMVVNLNDWIPPGFDLSLERTVFETGALTLHFAPGSYDLTDALSGRAGRFDE*
Ga0157373_1128128523300013100Corn RhizosphereAFVLDRVQALSFIPIPDQLLTYLVDRAPAGLLTWYRPDRIMVVNLNDWMPPGVDLSLERTVFEEGALTLHLAAGSYDVTDILGEDFGQPGN*
Ga0157371_1151281013300013102Corn RhizosphereAFVLDRVQALSFIPIPDQLLTYLVERAPAGLLTWYRPDRIMVVNLNDWMPPGVDLSLERTVFEEGALTLHLAAGSYDVTDILGEDFGQPGN*
Ga0163162_10007024133300013306Switchgrass RhizosphereFIPIPDQLLTYLVDRAPAGLLTWYRPDRIMVVNLNDWMPPGVDLSLERTVFEEGALTLHLAAGSYDVTDILGEDFGQPGN*
Ga0157376_1009616113300014969Miscanthus RhizosphereDGFLAFVVDRIQALAFIPVPDQLVTYLVQKAPEGLLTYYADDRIMVVNLNDWMPPGVDLSLERTEFQDGALTMHFAPGSYDLTDLLSESREPLED*
Ga0157376_1074530533300014969Miscanthus RhizosphereAPAGLLTWYRPDRIMVVNLNDWMPPGVDLSLERTVFEEGALTLHLAAGSYDVTDILGEDFGQPGN*
Ga0167639_100818613300015080Glacier Forefield SoilTYLVDRAPEGLLTWYRDDRIMVVNLTDWMPPGVDLSLERTVFEEGALTLHLAPGSYSLTEILVEAFPEAD*
Ga0182039_1201701723300016422SoilYLVQKAPSGLLTWFKDDRIMVVNLNDWMPPGADFSLERTVFEEGQLTLHLSPGSYDLTEALGDSPAV
Ga0187779_1097221313300017959Tropical PeatlandIPVPDQLVTYLVQKAPEGLLTYYPEDRIMVVNLNDWMPPGVDLSLERTEFQNDALTMHFAPGSYDLTDLLSGSREPLED
Ga0184609_1005724413300018076Groundwater SedimentVQALSFIPIPDQLLSYVVQKAPKGLLTYYADDHIMVVNLAPWMPAGVDLSLERTVFGEGALTLEFGDGSYDLGPLMEQE
Ga0184629_1019140823300018084Groundwater SedimentLTYLVQKAPPGLLTYYPDDRIMVVSLNEWMPPGMDLSLERTVFERGALTLQLASGSYDLSGFLGARRIDAED
Ga0210384_1077640423300021432SoilQALSFIPIPDQLLHYLAQKAPPGLLTYYADDRIMVVNLNDWMPPGVDLSLERTQFDQGALTLYFAPGSYNLSGILEESFSEQD
Ga0182009_1020006113300021445SoilDQLLTYLAQKAPPGLLTYYPEDRIMVVNLNDWMPPGIDLSLERTIFERGKLTLQFAGGSYDLSDFLRDASSYSGSV
Ga0126371_1367740223300021560Tropical Forest SoilIPDQLLTYLVQKAPSGLLTWFKDDRIMVVNLNDWMPPGADFSLERTVFEEGQLTLYLAPGSYDLTEALGDSGAD
Ga0207645_1112340723300025907Miscanthus RhizosphereRLKDGFLAFVLDRVQALSFIPIPDQLLTYLVERAPAGLLTWYRPDRIMVVNLNDWMPPGIDLSLERTVFEEGALTLHLAAGSYDVTDILGEDLGQPGN
Ga0207643_1036908533300025908Miscanthus RhizosphereFVLDRVHALSFIPIPDQLITYLVQKAPQGLLTWYRDDRIMVVNLNDWIPPGFDLSLERTVFETGALTLHFAPGSYDLTDALSGRAGRFDE
Ga0207695_1160584413300025913Corn RhizosphereDQLLSYVVQKAPHGLLTYYPDDRIMVVNVAPWMPPGIDLSLERTVFEEGALTLQFGDGSYDLGPLLEQNEPPDER
Ga0207646_1183774223300025922Corn, Switchgrass And Miscanthus RhizosphereQALSFIPIPDQLLTYLVQKAPEGLLTYYANDRIMVVSLNDWMPPGIDLSLEKTIFEKGALTLQFASGSYDLSGLIGAPRGAGE
Ga0207690_1178224123300025932Corn RhizosphereLDKVQALSFIPIPDQLLSYVVQKAPHGLLTYYPDDRIMVVNVAPWMPPGIDLSLERTVFEEGALTLQFGDGSYDLGPLLEQNEPTDER
Ga0207689_1063623913300025942Miscanthus RhizosphereSFIPIPDQLITYLVQKAPQGLLTWYRDDRIMVVNLNDWIPPGFDLSLERTVFETGALTLHFAPGSYDLTDALSGRAGRFDE
Ga0207640_1016661413300025981Corn RhizospherePDQLLSYVVQKAPHGLLTYYPDDRIMVVNVAPWMPPGIDLSLERTVFEEGALTLQFGDGSYDLGPLLEQNEPTDER
Ga0207677_1044393133300026023Miscanthus RhizosphereVQALSFIPIPDQLLTYLVDRAPAGLLTWYRPDRIMVVNLNDWMPPGVDLSLERTVFEEGALTLHLAAGSYDVTDILGEDFGQPGN
Ga0207676_1054921913300026095Switchgrass RhizosphereDRVHALSFIPIPDQLITYLVQKAPQGLLTWYRDDRIMVVNLNDWIPPGFDLSLERTVFETGALTLHFAPGSYDLTDALSGRAGRFDE
Ga0209465_1049104623300027874Tropical Forest SoilPDQLLAYVVQKAPRGLLTWYAADRIMVVNVAEWMPPGIDLSLERTQFDPGALTLHFAPGSYDLAPLLNASLAEPED
Ga0207428_1083508423300027907Populus RhizosphereALSFIPIPDQLLTYLVDRAPAGLLTWYRPDRIMVVNLNDWMPPGVDLSLERTVFEEGALTLHLAAGSYDVTDILGEDFGQPGN
Ga0209069_1063826623300027915WatershedsVLDRVQALSFIPIPDQLLTYLVQKAPEGLLTWYRDDRIMVVNLNDWMPPGADFSLERTVFEEGKLTLHLAPGSYDLTGLLGDSFAEPD
Ga0268266_1069869423300028379Switchgrass RhizosphereYLVQKAPEGLLTWYRDDRIMVVNLNDWMPPGADFSLERTAFDEGQLTLHLSPGSYDLTEILEEGDDVE
Ga0268264_1100991923300028381Switchgrass RhizosphereFIPIPDQLLTYLVQKAPPGLLTYYREDRIMVVSLNEWMPPGVDLSLEKTVFERGALTLQFASGSYDLSGLLGSPSVVEE
Ga0307503_1066010813300028802SoilLLTYLVQKAPSGLLTWYRDDRIMVVNLNDWMPPGADFSLERTAFEEGKLTLHLAPGSYDLTGLLGEPYGESD
Ga0307281_1005598313300028803SoilPIPDQLLTYLVQKAPPGLLTYYPDDRIMVVSLNEWMPPGMDLSLERTVFERGALTLQLAGGSYDLSGFLGAPRIDAED
Ga0307498_1024336113300031170SoilALSFIPIPDQLLTYLVQKAPSGLLTWYRDDRIMVVNLNDWMPPGADFSLERTAFEEGKLTLHLAPGSYDLTGLLGEPYGESD
Ga0318571_1017932823300031549SoilVLDRVQALSFIPIPDQLLTYLVQKAPSGLLTWFRDDRIMVVNLNDWMPPGADFSLERTEFEEGQLTLHLAPGSYDLTEALGEPSPSD
Ga0318515_1034015023300031572SoilVQALSFIPIPDQLLTYLVQKAPSGLLTWFRDDRIMVVNLNDWMPPGADFSLERTEFEEGQLTLHLAPGSYDLTEALGEPSPSD
Ga0265342_1003130013300031712RhizosphereDQLLTYLVQKAPAGLLTWYRDDRIMVVNLNDWMPPGADFSLERTVFDEGKLTLHFAPGSYDLTEALGDPAIESE
Ga0307469_1029334113300031720Hardwood Forest SoilAFVLDRVQALSFIPIPDQLLTYLVQKAPPGLLTYYREDRIMVVNLNDWMPPGVDLSLERTEFGQGALTLHFAPGSYDLAGLIERVGRAERDLGLD
Ga0318501_1046429023300031736SoilLLTYLVQKAPSGLLTWFKDDRIMVVNLNDWMPPGADFSLERTVFEEGQLTLHLSPGSYDLTEALGDSPAV
Ga0307468_10213865213300031740Hardwood Forest SoilLDRVQALSFIPIPDQLVTYLVQKAPPGLLTFYPEDRIMVVNLNDWMPPGVDLSLERTQFEQGALTLHFAPGSYNLTGLLQDDSYRD
Ga0318521_1050439913300031770SoilSFIPIPDQLLTYLVQKAPSGLLTWFRDDRIMVVNLNDWMPPGADFSLERTEFEEGQLTLHLAPGSYDLTEALGEPSPSD
Ga0318562_1078313313300032008SoilIPIPDQLLTYLVQKAPSGLLTWFRDDRIMVVNLNDWMPPGADFSLERTEFEEGQLTLHLAPGSYDLTEALGEPSPSD
Ga0318558_1062650213300032044SoilIQALAFIPVPDQLVTYLAQKAPEGLLTYYPEDRIMVVNLNDWMPPGVDLSLERTEFQNGALTMHFAPGSYDLTDLLSGSREPVED
Ga0318514_1048321913300032066SoilIPDQLLTYLVQKAPSGLLTWFRDDRIMVVNLNDWMPPGADFSLERTEFEEGQLTLHLAPGSYDLTEALGEPSPSD
Ga0318553_1013241113300032068SoilFIPIPDQLLTYLVQKAPSGLLTWFRDDRIMVVNLNDWMPPGADFSLERTVFEEGQLTLHLAPGSYDLTEALESTASE
Ga0307470_1002827743300032174Hardwood Forest SoilQALSFIPIPDQLLTYLVQKAPPGLLTYYSNDRIMVVSLNDWMPPGIDLSLEKTIFEKGALTLQFASGSYDLSGLLGAPRGAGE
Ga0307471_10172223423300032180Hardwood Forest SoilLKDGFLAFVLDRVQALSFIPIPDQLLTYLVQKAPAGLLTWFGEDRIMVVNLNDWMPPGADFSLERTVFEEGKLTLHLAPGSYDLTEALAPLESE
Ga0307471_10212081913300032180Hardwood Forest SoilSFIPIPDQLLTYLAQKAPAGLLTWYAEDRIMVVNLNEWMPPGIDLSLERTQFDPGALTLHFAPGSYDLADLLSETLSAEAD
Ga0307471_10277289013300032180Hardwood Forest SoilFLAFVLDKVQALSFIPIPDQLLTYLVQKAPPGFLTWYRDDRIMVVNLNDWMPGGMDLSLERTEFTEGALTLHFATGSFDITALLEESFPELEG
Ga0307472_10115456123300032205Hardwood Forest SoilQALSFIPIPDQLLTYLVQKAPKGLLTYYPDDRIMVVNLNDWMPPGVDLSLEKTVFQKEALTLQFASGSYDLSDLLGTLPADAG
Ga0315273_1065294033300032516SedimentKDGFLAFVLDRVQALSFIPIPDQLLTYLVQKAPKGLLTWYREDRIMVVNLNDWMPPGADFSLERTVFEEGKLTLHLAPGSYDLTEMLAESFGE
Ga0335085_1136232023300032770SoilLSFIPIPDQLLTYLVQKAPEGLLTWYRDDRIMVVNMNDWMPPGADFSLERTAFEDGQLTLHLAPGSYDLTEILEEPEERD
Ga0335082_1034606113300032782SoilYLVQKAPDGLLTYYPEDRIMVVNLNEWTPPGMDLSLERTLFEKGALTLQFASGSYDLSGLLGEPPPD
Ga0316619_1173910313300033414SoilQALSFIPIPDQLLTYVVERAPAGLLTWYRDDRIMVVNLTDWMPPGIDLSLERTVFEEGALTLHLAPGSYNLSEVLTDSFQYGD
Ga0326726_1176619913300033433Peat SoilVQALSFIPIPDQLLTYLVQKAPEGLLTYYPDDRIMVVNLNEWTPPGIDLSLERTLFEEGALTLQFASGSYDLSDLLGDSLSR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.