NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F105877

Metagenome Family F105877

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105877
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 48 residues
Representative Sequence MSNHENEMLKENIFDLWVEYLELDGWPKGCNETYAEAARRTESEWLEMN
Number of Associated Samples 86
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 86.00 %
% of genes near scaffold ends (potentially truncated) 19.00 %
% of genes from short scaffolds (< 2000 bps) 83.00 %
Associated GOLD sequencing projects 76
AlphaFold2 3D model prediction Yes
3D model pTM-score0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (49.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(38.000 % of family members)
Environment Ontology (ENVO) Unclassified
(85.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(78.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.65%    β-sheet: 0.00%    Coil/Unstructured: 49.35%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.93.1.2: Myeloperoxidase-liked1q4ga11q4g0.78578
a.258.1.1: PG0816-liked2apla12apl0.77733
d.92.1.13: Zn aminopeptidase catalytic domaind1z1wa21z1w0.77492
d.163.1.2: Eukaryotic DNA topoisomerase I, catalytic cored1a41a_1a410.77249
d.43.1.1: Elongation factor Ts (EF-Ts), dimerisation domaind4pc3c34pc30.77175

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF00856SET 3.00
PF07486Hydrolase_2 2.00
PF06067DUF932 2.00
PF07883Cupin_2 1.00
PF02511Thy1 1.00
PF13155Toprim_2 1.00
PF02195ParBc 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG3773Cell wall hydrolase CwlJ, involved in spore germinationCell cycle control, cell division, chromosome partitioning [D] 2.00
COG1351Thymidylate synthase ThyX, FAD-dependent familyNucleotide transport and metabolism [F] 1.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms51.00 %
UnclassifiedrootN/A49.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10118089Not Available1051Open in IMG/M
3300000101|DelMOSum2010_c10124181All Organisms → Viruses → Predicted Viral1007Open in IMG/M
3300000116|DelMOSpr2010_c10129506Not Available896Open in IMG/M
3300001450|JGI24006J15134_10000990All Organisms → cellular organisms → Bacteria16354Open in IMG/M
3300001450|JGI24006J15134_10012647Not Available4088Open in IMG/M
3300001450|JGI24006J15134_10081388All Organisms → Viruses → Predicted Viral1211Open in IMG/M
3300001460|JGI24003J15210_10117723Not Available730Open in IMG/M
3300002231|KVRMV2_100223400All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300002483|JGI25132J35274_1010318All Organisms → Viruses → Predicted Viral2296Open in IMG/M
3300002488|JGI25128J35275_1001217All Organisms → cellular organisms → Bacteria7802Open in IMG/M
3300004448|Ga0065861_1059702All Organisms → Viruses → Predicted Viral1375Open in IMG/M
3300004457|Ga0066224_1058251All Organisms → Viruses → Predicted Viral3603Open in IMG/M
3300006025|Ga0075474_10172792All Organisms → cellular organisms → Bacteria → Proteobacteria671Open in IMG/M
3300006165|Ga0075443_10030986All Organisms → Viruses → Predicted Viral1788Open in IMG/M
3300006735|Ga0098038_1032069All Organisms → Viruses → Predicted Viral1957Open in IMG/M
3300006738|Ga0098035_1255749All Organisms → cellular organisms → Bacteria → Proteobacteria576Open in IMG/M
3300006752|Ga0098048_1031138All Organisms → Viruses → Predicted Viral1736Open in IMG/M
3300006752|Ga0098048_1071460All Organisms → Viruses → Predicted Viral1069Open in IMG/M
3300006789|Ga0098054_1178189Not Available779Open in IMG/M
3300006789|Ga0098054_1359098All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria516Open in IMG/M
3300006793|Ga0098055_1142254Not Available925Open in IMG/M
3300006810|Ga0070754_10164729All Organisms → Viruses → Predicted Viral1051Open in IMG/M
3300006916|Ga0070750_10254138Not Available762Open in IMG/M
3300007276|Ga0070747_1199642Not Available705Open in IMG/M
3300007344|Ga0070745_1004642All Organisms → cellular organisms → Bacteria7088Open in IMG/M
3300007344|Ga0070745_1298066Not Available574Open in IMG/M
3300008012|Ga0075480_10323234Not Available777Open in IMG/M
3300008218|Ga0114904_1026385All Organisms → Viruses → Predicted Viral1651Open in IMG/M
3300009074|Ga0115549_1023102All Organisms → Viruses → Predicted Viral2441Open in IMG/M
3300009173|Ga0114996_10234896All Organisms → Viruses → Predicted Viral1460Open in IMG/M
3300009173|Ga0114996_10354325All Organisms → Viruses → Predicted Viral1135Open in IMG/M
3300009428|Ga0114915_1009114All Organisms → Viruses → Predicted Viral3842Open in IMG/M
3300009481|Ga0114932_10387282Not Available830Open in IMG/M
3300009508|Ga0115567_10676458Not Available619Open in IMG/M
3300009604|Ga0114901_1183943All Organisms → cellular organisms → Bacteria → Proteobacteria613Open in IMG/M
3300009605|Ga0114906_1243055Not Available589Open in IMG/M
3300009703|Ga0114933_10726742All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Calothrix → Calothrix elsteri → Calothrix elsteri CCALA 953635Open in IMG/M
3300009786|Ga0114999_10361398All Organisms → Viruses → Predicted Viral1151Open in IMG/M
3300013010|Ga0129327_10874500Not Available514Open in IMG/M
3300017705|Ga0181372_1033615Not Available868Open in IMG/M
3300017721|Ga0181373_1051513Not Available748Open in IMG/M
3300017744|Ga0181397_1035309All Organisms → Viruses → Predicted Viral1422Open in IMG/M
3300017767|Ga0181406_1062982All Organisms → Viruses → Predicted Viral1139Open in IMG/M
3300017779|Ga0181395_1014274All Organisms → Viruses → Predicted Viral2766Open in IMG/M
3300017971|Ga0180438_10194399All Organisms → Viruses → Predicted Viral1620Open in IMG/M
3300018421|Ga0181592_10234787All Organisms → Viruses → Predicted Viral1354Open in IMG/M
3300018424|Ga0181591_10957839Not Available584Open in IMG/M
3300019765|Ga0194024_1126807Not Available591Open in IMG/M
3300020278|Ga0211606_1105101Not Available543Open in IMG/M
3300020339|Ga0211605_1017556All Organisms → Viruses → Predicted Viral1630Open in IMG/M
3300020595|Ga0206126_10466653All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage547Open in IMG/M
3300021365|Ga0206123_10071898All Organisms → Viruses → Predicted Viral1714Open in IMG/M
3300022050|Ga0196883_1002332All Organisms → Viruses → Predicted Viral2147Open in IMG/M
3300022068|Ga0212021_1057179Not Available795Open in IMG/M
3300023180|Ga0255768_10371860All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium770Open in IMG/M
(restricted) 3300024057|Ga0255051_10405081Not Available507Open in IMG/M
3300024262|Ga0210003_1166226Not Available932Open in IMG/M
(restricted) 3300024517|Ga0255049_10194470Not Available927Open in IMG/M
(restricted) 3300024517|Ga0255049_10249188Not Available813Open in IMG/M
(restricted) 3300024518|Ga0255048_10166635All Organisms → Viruses → Predicted Viral1079Open in IMG/M
(restricted) 3300024518|Ga0255048_10615260Not Available525Open in IMG/M
(restricted) 3300024520|Ga0255047_10245667Not Available908Open in IMG/M
3300025066|Ga0208012_1020693All Organisms → Viruses → Predicted Viral1066Open in IMG/M
3300025071|Ga0207896_1071019Not Available542Open in IMG/M
3300025085|Ga0208792_1042230Not Available874Open in IMG/M
3300025098|Ga0208434_1088111Not Available623Open in IMG/M
3300025120|Ga0209535_1039089All Organisms → Viruses → Predicted Viral2142Open in IMG/M
3300025127|Ga0209348_1032668All Organisms → Viruses → Predicted Viral1856Open in IMG/M
3300025131|Ga0209128_1027289All Organisms → Viruses → Predicted Viral2375Open in IMG/M
3300025131|Ga0209128_1129762Not Available777Open in IMG/M
3300025132|Ga0209232_1032051All Organisms → Viruses → Predicted Viral2006Open in IMG/M
3300025132|Ga0209232_1054637All Organisms → Viruses → Predicted Viral1448Open in IMG/M
3300025132|Ga0209232_1113752Not Available900Open in IMG/M
3300025137|Ga0209336_10150865Not Available614Open in IMG/M
3300025141|Ga0209756_1261542Not Available629Open in IMG/M
3300025151|Ga0209645_1109872Not Available885Open in IMG/M
3300025151|Ga0209645_1113065Not Available868Open in IMG/M
3300025168|Ga0209337_1034111All Organisms → Viruses → Predicted Viral2787Open in IMG/M
3300025287|Ga0207903_1071426Not Available598Open in IMG/M
3300025853|Ga0208645_1006038All Organisms → cellular organisms → Bacteria8157Open in IMG/M
3300027771|Ga0209279_10058008All Organisms → Viruses → Predicted Viral1097Open in IMG/M
3300027838|Ga0209089_10277535Not Available962Open in IMG/M
(restricted) 3300027856|Ga0255054_10615154Not Available525Open in IMG/M
(restricted) 3300027865|Ga0255052_10599093Not Available540Open in IMG/M
(restricted) 3300027881|Ga0255055_10368863Not Available774Open in IMG/M
3300028018|Ga0256381_1020326All Organisms → Viruses → Predicted Viral1087Open in IMG/M
3300028039|Ga0256380_1054792Not Available599Open in IMG/M
3300028125|Ga0256368_1003445All Organisms → Viruses → Predicted Viral2324Open in IMG/M
3300029293|Ga0135211_1026122Not Available683Open in IMG/M
3300029301|Ga0135222_1010604Not Available702Open in IMG/M
3300029302|Ga0135227_1007322Not Available817Open in IMG/M
3300029302|Ga0135227_1013884Not Available718Open in IMG/M
3300029306|Ga0135212_1029733Not Available580Open in IMG/M
3300029787|Ga0183757_1000123Not Available47104Open in IMG/M
3300031622|Ga0302126_10185863All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium750Open in IMG/M
3300031627|Ga0302118_10111003All Organisms → Viruses → Predicted Viral1361Open in IMG/M
3300031675|Ga0302122_10078794All Organisms → Viruses → Predicted Viral1422Open in IMG/M
3300032006|Ga0310344_10739660Not Available836Open in IMG/M
3300033742|Ga0314858_149356All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Rhizobium phage RHph_I4600Open in IMG/M
3300034656|Ga0326748_027592Not Available775Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine38.00%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous10.00%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater9.00%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean5.00%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine5.00%
Marine HarborEnvironmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor5.00%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater4.00%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh3.00%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine3.00%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater3.00%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine2.00%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine2.00%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine2.00%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface2.00%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater1.00%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.00%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface1.00%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.00%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater1.00%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment1.00%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment1.00%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300002483Marine viral communities from the Pacific Ocean - ETNP_6_30EnvironmentalOpen in IMG/M
3300002488Marine viral communities from the Pacific Ocean - ETNP_2_60EnvironmentalOpen in IMG/M
3300004448Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300004457Marine viral communities from Newfoundland, Canada MC-1EnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006165Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNAEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300008218Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6EnvironmentalOpen in IMG/M
3300009074Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430EnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009428Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009508Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412EnvironmentalOpen in IMG/M
3300009604Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300009703Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaGEnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300017705Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaGEnvironmentalOpen in IMG/M
3300017721Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaGEnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017767Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20EnvironmentalOpen in IMG/M
3300017779Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16EnvironmentalOpen in IMG/M
3300017971Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_2 metaGEnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019765Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MGEnvironmentalOpen in IMG/M
3300020278Marine microbial communities from Tara Oceans - TARA_B100000674 (ERX556076-ERR599151)EnvironmentalOpen in IMG/M
3300020339Marine microbial communities from Tara Oceans - TARA_B100000674 (ERX555929-ERR599080)EnvironmentalOpen in IMG/M
3300020595Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1EnvironmentalOpen in IMG/M
3300021365Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1EnvironmentalOpen in IMG/M
3300022050Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3)EnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300023180Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaGEnvironmentalOpen in IMG/M
3300024057 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_9EnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024517 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3EnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025071Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)EnvironmentalOpen in IMG/M
3300025085Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025098Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025127Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025131Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025287Marine viral communities from the Deep Pacific Ocean - MSP-131 (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300027771Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027838Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)EnvironmentalOpen in IMG/M
3300027856 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_23EnvironmentalOpen in IMG/M
3300027865 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_21EnvironmentalOpen in IMG/M
3300027881 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_27EnvironmentalOpen in IMG/M
3300028018Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 1600mEnvironmentalOpen in IMG/M
3300028039Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 2300mEnvironmentalOpen in IMG/M
3300028125Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SBEnvironmentalOpen in IMG/M
3300029293Marine harbor viral communities from the Indian Ocean - SCH2EnvironmentalOpen in IMG/M
3300029301Marine harbor viral communities from the Indian Ocean - SRH1EnvironmentalOpen in IMG/M
3300029302Marine harbor viral communities from the Indian Ocean - SRB3EnvironmentalOpen in IMG/M
3300029306Marine harbor viral communities from the Indian Ocean - SCH3EnvironmentalOpen in IMG/M
3300029787Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172EnvironmentalOpen in IMG/M
3300031622Marine microbial communities from Western Arctic Ocean, Canada - CB4_20mEnvironmentalOpen in IMG/M
3300031627Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1EnvironmentalOpen in IMG/M
3300031675Marine microbial communities from Western Arctic Ocean, Canada - CB21_SCMEnvironmentalOpen in IMG/M
3300032006Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MGEnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M
3300034656Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 502_2477EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1011808933300000101MarineMSNHENEMLKEDLFLLWVEYLVLQGWVDNDVETYDEAARRTHEELEGMD*
DelMOSum2010_1012418123300000101MarineMSNHENEMLKENIFDLWVEYLELDGWPKGCNETYEEAARRTESEWMEMN*
DelMOSpr2010_1012950623300000116MarineMSNHENEMIKENIFDLWVEYLELDGWPKGCNETYSEAARRTESEWLEMS*
JGI24006J15134_1000099093300001450MarineMSNHENEMLKENIFDLWVEYLELDGWPKGCNETYAEATRRTESEWMEMD*
JGI24006J15134_1001264783300001450MarineMSNHENEMLKENIFDMWYEYLILDGWDEHDPETIKEATLRTEEEYIRMD*
JGI24006J15134_1008138833300001450MarineMSNHENEMIKENIFDLWYEYLVLDGWDECDPDTIREATLRTEEEYIRMS*
JGI24003J15210_1011772343300001460MarineHENEMLKENIFDMWVEYLELDGWLKADLETYREAARRTESQWLEMD*
KVRMV2_10022340023300002231Marine SedimentMSNHENEMLKENIFDMWVEYLELDGWPKGCNETYAEAARRTESEWLEMS*
JGI25132J35274_101031823300002483MarineMSNHENEMLKEQLFDEWLEHLELFVGWPKGDPETYKEAARRTEEEWERMN*
JGI25128J35275_100121713300002488MarineRFPSPSPNLLEIKMSNHENEMLKENIFDLWVEYLELDGWPKGCNETYAEAARRTESEWLEMN*
Ga0065861_105970233300004448MarineMSNHENEMLKENIFDLWVEYLELDGWPKGCNETYAEAARRTESEWMEMS*
Ga0066224_105825133300004457MarineMSNHENEMLKENIFDLWVEYLELDGWPKGCNETYAEAARRTESEWLEMS*
Ga0075474_1017279233300006025AqueousMSNHENEAIKEDIFDMWLEHLWLDGWDKDDLETYKEAARRTESEWLEMN*
Ga0075443_1003098663300006165MarineMSNHENEMLKENIFDMWVEYLELDGWPKGCNETYSEAARRTEEEYIRMN*
Ga0098038_103206933300006735MarineMSNYENEILKEDIFDLWVEYLELDGWPKADLETYREAARRTESEWLEMN*
Ga0098035_125574933300006738MarineMSNYENEILKEDIFDLWVEYLELDGWPKADLETYREAARRTESEWLEM
Ga0098048_103113863300006752MarineMSNYENEILKEDIFDLWVEYLELDGWPKADLETYREAARRTESQWLEMD*
Ga0098048_107146033300006752MarineMSNHENEMLKENIFDLWVEYLELDGWPKGCNETYAEAARRTESEWLEMN*
Ga0098054_117818913300006789MarineMSNHENEMLKENIFDLWLEYLELEGWPEDQVETYDEAARRTYEEWKGME*
Ga0098054_135909823300006789MarineMSNHENEMLKEDMFDRWVEWLENVEQWQKGDLETYREAVRRTEQEWKELH*
Ga0098055_114225433300006793MarineMSNHENEMLKEDMFDRWVEWLESVEQWQKGDLETYREAVRRTEQEWKELH*
Ga0070754_1016472933300006810AqueousMSNHENEMLKENIFDLWVEYLELDGWPKGDPETYKEAARRTESEWLEMN*
Ga0070750_1025413813300006916AqueousMSNHENEMLKENIFDLWVEYLELDGWPKGCNETYSEAARRTESEWLEMS*
Ga0070747_119964223300007276AqueousMSNHENEMLKENIFDLWVEYLELDGWPKGCNETYEEAARRTESEWMEMS*
Ga0070745_1004642103300007344AqueousMSNHENEMLKENIFDLWVEYLELDWWPKGCNETYSEAARRTESEWLEMS*
Ga0070745_129806613300007344AqueousMSNHENEMLKENIFDLWVEYLELDGWPKGDPETYKEAARRT
Ga0075480_1032323423300008012AqueousMSNHENEMIKENIFDLWVEYLELDGWPKGCNETYAEAARRTESEWLEMH*
Ga0114904_102638563300008218Deep OceanMSNHENEILKEDLFLLWVEHLVLQGWVDNDAETYDEAARRTESQWLEMD*
Ga0115549_102310233300009074Pelagic MarineMSNHENEMLKENIFDLWVEYLELDGWPKGCNETYEEAARRTESEWLEMS*
Ga0114996_1023489623300009173MarineMSNHENEMIKENIFDMWVEYLELDGWPKGCNETYSEAARRTESEWLEMN*
Ga0114996_1035432533300009173MarineMSNHENEMLKENIFDMWVEYLILDGWDEHDPETIKEATLRTEEEYIRMD*
Ga0114915_100911473300009428Deep OceanMSNSENEMIKENIFDLWYEYLVLDGWDECDPDTIREATLRTEEEYIRMS*
Ga0114932_1038728233300009481Deep SubsurfaceMSNHENEMLKENIFDMWVEYLELDGWPKGCNETYAEAARRTESEWLEMN*
Ga0115567_1067645823300009508Pelagic MarineMSNHENEMLKENIFDLWVEYLELDGWPKGCNETYAETARRTESEWLEMS*
Ga0114901_118394333300009604Deep OceanMSNHENEILKEDLFLLWVEHLVLQGWVDNDAETYDEAARRTESQWLEMD
Ga0114906_124305523300009605Deep OceanMSNHENEMLKEDLFLLWVEHLVLQGWVDNDAETYDEAARRTESQWLEMD*
Ga0114933_1072674223300009703Deep SubsurfaceMSNHENEMLKENIFDMWVEYLELDGWPKGCNETYAEAARRTESEWLEMD*
Ga0114999_1036139833300009786MarineMIKENLFDMWLSYLILDGWDEHDPETIKEATLRTEEEYIRMD*
Ga0129327_1087450013300013010Freshwater To Marine Saline GradientMSNHENEMLKENIFDLWVEYLELDGWPKGCNETYEEAARRTESEWMEM
Ga0181372_103361553300017705MarineLKENIFDLWVEYLELDGWPKGCNETYAEAARRTESEWLEMN
Ga0181373_105151323300017721MarineMSNYENEILKEDIFDLWVEYLELDGWPKADLETYREAARRTESEWLEMN
Ga0181397_103530923300017744SeawaterMSNHENEMLKENIFDLWVEYLELDGWPKGCNETYSEAARRTESEWMEMS
Ga0181406_106298233300017767SeawaterMSNHENEMLKENIFDLWVEYLELDGWLKADLETYKEAARRTESQWLEMD
Ga0181395_101427483300017779SeawaterMSNSENEMIKENIFDLWVEYLELDGWPKGCNETYAEAARRTESEWLEMS
Ga0180438_1019439973300017971Hypersaline Lake SedimentMSNHENEMIKENIFDLWLEYLELDGWPKGCNETYAEAARRTESEWLEMN
Ga0181592_1023478723300018421Salt MarshMSNHENEMLKENIFDLWVEYLRLEGRPNFCNETYAEAARRTESEWLEMN
Ga0181591_1095783933300018424Salt MarshMSNYENEMIKENIFDVWMEYLELDGWPKGCNETYAEAARRTESEWLEMH
Ga0194024_112680733300019765FreshwaterMSNYENEMLKENIFDLWVEYLELDGWPKGDPETYKEAARRTESEWLEMN
Ga0211606_110510133300020278MarineMSNHENEMLKENIFDMWVEYLELDGWPKGDLETYREAARRTESE
Ga0211605_101755683300020339MarineMSNHENEMLKENIFDMWVEYLELDGWPKGDLETYREAARRTESEWLEMN
Ga0206126_1046665323300020595SeawaterMSNHENEMLKENIFDLWVEYLELDGWPKGCNETYSEAARRTESEWLEMS
Ga0206123_1007189863300021365SeawaterMSNHENEMLKENIFDLWVEYLELDGWPKGCNETYEEAARRTESEWLEMS
Ga0196883_100233243300022050AqueousMSNHENEAIKEDIFDMWLEHLWLDGWDKDDLETYKEAARRTESEWLEMN
Ga0212021_105717913300022068AqueousMSNHENEMLKENIFDLWVEYLELDGWPKGCNETYSEAA
Ga0255768_1037186023300023180Salt MarshMSNHENEMLKENIFDLWVEYLELDGWPKGDPETYKEAARRTESEWLEMN
(restricted) Ga0255051_1040508113300024057SeawaterSNHENEMLKENIFDMWYEYLILDGWDEHDPETIKEATLRTEEEYIRMD
Ga0210003_116622623300024262Deep SubsurfaceMSNHENEMLKENIFDMWYEYLILDGWDEHDPETIKEATLRTEEEYIRMS
(restricted) Ga0255049_1019447053300024517SeawaterMSNHENEMLKENIFDMWYEYLILDGWDEHDPETIKEATLRTEEEYIRMD
(restricted) Ga0255049_1024918813300024517SeawaterMSNHENEMLKENIFDMWVEYLELDGWLKADLETYREA
(restricted) Ga0255048_1016663513300024518SeawaterMSNHENEMIKENIFDLWVEYIELDGWPKGCNETYEEAARRTESEWLEMS
(restricted) Ga0255048_1061526023300024518SeawaterMSNHENEMLKENIFDLWVEYLELDGWPKGCNETYAEAARRTESEWMEMS
(restricted) Ga0255047_1024566713300024520SeawaterMSNHENEMLKENIFDLWVEYLELDGWPKGCNETYSEAARRTESEWLEMN
Ga0208012_102069343300025066MarineMSNHENEMLKENIFDLWVEYLELDGWPKGCNETYAEAARRTESEWLEMN
Ga0207896_107101913300025071MarineMSNHENEMLKENIFDLWVEYLELDGWPKGCNETYAEATRRTESEWMEMD
Ga0208792_104223033300025085MarineMSNHENEMLKENIFDLWVEYLELDGWPKGCNETYAEAAR
Ga0208434_108811133300025098MarineMSNYENEILKEDIFDLWVEYLELDGWLKADLETYREAARRTESQWLEMD
Ga0209535_103908973300025120MarineMSNHENEMLKENIFDMWVEYLELDGWLKADLETYREAARRTESQWLEMD
Ga0209348_103266823300025127MarineMSNHENEIRKENIFDMYVEYLELGGWPKGDPKTYAEAARRTESKLLEID
Ga0209128_102728943300025131MarineMSNHENEMLKENIFDLWVEYLELDGWPKGCNKTYAEAARRTESEWLEMN
Ga0209128_112976223300025131MarineMSNHENEMLKEDMFDRWVEWLENVEQWQKGDLETYREAVRRTEQEWKEMH
Ga0209232_103205183300025132MarineMSNHENEILKENIFDAWVEYLWLDGWDIHGPEIYIEAERRTESEWLEMN
Ga0209232_105463723300025132MarineMSNHENEMLKEDLFLLWVEHLVLQGWVDNDAETYDEAARRTESQWLEMD
Ga0209232_111375223300025132MarineMSNHENEMLKEQLFDEWLEHLELFVGWPKGDPETYKEAARRTEEEWERMN
Ga0209336_1015086543300025137MarineKENIFDMWVEYLELDGWLKADLETYREAARRTESQWLEMD
Ga0209756_126154223300025141MarineMSNHENEMLKEDMFDRWVEWLENVEQWQKGDLETYREAVRRTEQEWKELH
Ga0209645_110987223300025151MarineMSNHENEMMKEDIFDMWLEYLWLDGWDKDDPETYKEAVRRTESEWLEMN
Ga0209645_111306513300025151MarineMNNHENEMLKEQIFDEWLEHLELFVGWPKGDPETYKEAARRT
Ga0209337_103411153300025168MarineMSNSENEMIKENIFDLWYEYLVLDGWDECDPDTIREATLRTEEEYIRMS
Ga0207903_107142623300025287Deep OceanMSNHENEMLKENIFDMWYEYLILDGWDEHDPETIKEVTLRTESEWLEMN
Ga0208645_1006038203300025853AqueousMSNHENEMIKENIFDLWVEYLELDGWPKGCNETYSEAARRTESEWLEMS
Ga0209279_1005800813300027771MarineMSHHENEMLKENIFDMWVEYLELDGWPKGCNETYSEAARRTEEEYIRMN
Ga0209089_1027753523300027838MarineMSNHENEMIKENIFDMWVEYLELDGWPKGCNETYSEAARRTESEWLEMN
(restricted) Ga0255054_1061515423300027856SeawaterMSNQQNEMIKENIFDMWYEYLILDGWDEHDPETIKEATLRT
(restricted) Ga0255052_1059909323300027865SeawaterMSNLENEQLKEDLFLLWVEHLMLQGWPDNDADTYDEAARRTHEEWERMD
(restricted) Ga0255055_1036886313300027881SeawaterMSNHENEMIKENIFDLWVEYLELDGWPKGCNETYSEAARRTESEWLEMN
Ga0256381_102032613300028018SeawaterMSNHENEMLKENIFDIWVEHLELDGWPKGDLETYREAARRTEQEWKELH
Ga0256380_105479213300028039SeawaterMSNHENEMLKENIFDMWVEYLELDGWPKGCNETYAEAARR
Ga0256368_100344593300028125Sea-Ice BrineMSNHENEMLKENIFDLWVEYLELDGWPKGCNETHEEAARRTESEWLEMS
Ga0135211_102612243300029293Marine HarborMSNHENEMLKEQIFDEWLEHLELFVGWPKGDPETYKEAARRTEEEWERMNR
Ga0135222_101060413300029301Marine HarborMSNHENEMLKEQIFDEWLEHLELFVGWPKGDPETYKEAARRTLIVTGK
Ga0135227_100732213300029302Marine HarborMKENIFDMWLEYLWLDGWDKDDPEIYREAARRTESEWLEMN
Ga0135227_101388423300029302Marine HarborMSNHENEAIKEDIFDMWLEHLWLDGWDKDDLETYKEAARRTEEEWMEMQ
Ga0135212_102973313300029306Marine HarborNHENEMLKENIFDMWVEYLELDGWPKGDLETYREAARRTESEWLEMN
Ga0183757_1000123533300029787MarineMSNHENEMLKENIFDMWVEYLELDGWPKGCNETYAEAARRTESEWLEMN
Ga0302126_1018586333300031622MarineMSNHENEMLKEDLFLLWVEHLVLQGWVDNDAETYDEAARRTESE
Ga0302118_1011100323300031627MarineVSNHENEMIKENIFDMWVEYLELDGWPKGCNETYSEAARRTESEWLEMN
Ga0302122_1007879413300031675MarineMSNHENEMLKENIFDMWYEYLILDGWDEHDPETIKEVTLRTESEWLEMD
Ga0310344_1073966033300032006SeawaterMSNHENEMLKENIFDMWVEYLELDGWPKGCNETYAEAARRTESEWLEMH
Ga0314858_149356_19_1473300033742Sea-Ice BrineMLKENIFDLWVEYLELDGWPKGCNETHEEAARRTESEWLEMS
Ga0326748_027592_257_4183300034656Filtered SeawaterLEIKMSNHENEMIKENIFDMWVEYLELDGWPKGCNETYSEAARRTESEWLEMN

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Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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