NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F105890

Metagenome Family F105890

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105890
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 68 residues
Representative Sequence MTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGQGNYNFSGIKQRIAFNEYKENEDE
Number of Associated Samples 80
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 91.00 %
% of genes near scaffold ends (potentially truncated) 18.00 %
% of genes from short scaffolds (< 2000 bps) 80.00 %
Associated GOLD sequencing projects 69
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (44.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(34.000 % of family members)
Environment Ontology (ENVO) Unclassified
(71.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(90.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 52.63%    β-sheet: 0.00%    Coil/Unstructured: 47.37%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF12957DUF3846 12.00
PF03819MazG 5.00
PF07726AAA_3 1.00
PF01551Peptidase_M23 1.00
PF13936HTH_38 1.00


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms56.00 %
UnclassifiedrootN/A44.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10169280Not Available728Open in IMG/M
3300001450|JGI24006J15134_10013665All Organisms → Viruses → Predicted Viral3892Open in IMG/M
3300001450|JGI24006J15134_10138390Not Available815Open in IMG/M
3300001472|JGI24004J15324_10017843All Organisms → Viruses → Predicted Viral2443Open in IMG/M
3300001472|JGI24004J15324_10024219All Organisms → Viruses → Predicted Viral2027Open in IMG/M
3300001589|JGI24005J15628_10149995Not Available709Open in IMG/M
3300003894|Ga0063241_1020230All Organisms → Viruses → Predicted Viral3570Open in IMG/M
3300004280|Ga0066606_10280772Not Available591Open in IMG/M
3300004460|Ga0066222_1321881Not Available622Open in IMG/M
3300006027|Ga0075462_10033145All Organisms → Viruses → Predicted Viral1659Open in IMG/M
3300006029|Ga0075466_1054111All Organisms → Viruses → Predicted Viral1175Open in IMG/M
3300006164|Ga0075441_10249696Not Available653Open in IMG/M
3300006754|Ga0098044_1066744Not Available1509Open in IMG/M
3300006789|Ga0098054_1023500All Organisms → Viruses → Predicted Viral2442Open in IMG/M
3300006789|Ga0098054_1180389Not Available773Open in IMG/M
3300006790|Ga0098074_1039696All Organisms → Viruses → Predicted Viral1344Open in IMG/M
3300006802|Ga0070749_10070049All Organisms → Viruses → Predicted Viral2105Open in IMG/M
3300006802|Ga0070749_10416722Not Available739Open in IMG/M
3300006802|Ga0070749_10473131Not Available685Open in IMG/M
3300006810|Ga0070754_10198237Not Available937Open in IMG/M
3300006916|Ga0070750_10285998All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria708Open in IMG/M
3300006919|Ga0070746_10428630All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300007229|Ga0075468_10091093All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria977Open in IMG/M
3300007234|Ga0075460_10039561All Organisms → Viruses → Predicted Viral1802Open in IMG/M
3300007236|Ga0075463_10034138All Organisms → Viruses → Predicted Viral1659Open in IMG/M
3300007345|Ga0070752_1315848Not Available592Open in IMG/M
3300007345|Ga0070752_1378222Not Available527Open in IMG/M
3300007538|Ga0099851_1062968All Organisms → Viruses → Predicted Viral1445Open in IMG/M
3300007539|Ga0099849_1289269Not Available594Open in IMG/M
3300007540|Ga0099847_1255839Not Available501Open in IMG/M
3300007960|Ga0099850_1374443Not Available530Open in IMG/M
3300008012|Ga0075480_10188868All Organisms → Viruses → Predicted Viral1096Open in IMG/M
3300009001|Ga0102963_1024281All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.2545Open in IMG/M
3300009027|Ga0102957_1130948Not Available884Open in IMG/M
3300009428|Ga0114915_1033895All Organisms → Viruses → Predicted Viral1729Open in IMG/M
3300009593|Ga0115011_10015502Not Available5059Open in IMG/M
3300010150|Ga0098056_1040268Not Available1627Open in IMG/M
3300010297|Ga0129345_1137012All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria889Open in IMG/M
3300010318|Ga0136656_1119404Not Available916Open in IMG/M
3300010368|Ga0129324_10236090Not Available733Open in IMG/M
3300010883|Ga0133547_11648457All Organisms → Viruses → Predicted Viral1195Open in IMG/M
3300011128|Ga0151669_161314Not Available567Open in IMG/M
3300011252|Ga0151674_1008799All Organisms → cellular organisms → Bacteria → Proteobacteria2227Open in IMG/M
3300017713|Ga0181391_1015205All Organisms → Viruses → Predicted Viral1950Open in IMG/M
3300017713|Ga0181391_1060190All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium885Open in IMG/M
3300017719|Ga0181390_1054348All Organisms → Viruses → Predicted Viral1166Open in IMG/M
3300017724|Ga0181388_1007715All Organisms → Viruses → Predicted Viral2834Open in IMG/M
3300017742|Ga0181399_1064743Not Available935Open in IMG/M
3300017746|Ga0181389_1030304All Organisms → Viruses → Predicted Viral1648Open in IMG/M
3300017748|Ga0181393_1122562Not Available658Open in IMG/M
3300017762|Ga0181422_1015295Not Available2544Open in IMG/M
3300017781|Ga0181423_1032196Not Available2126Open in IMG/M
3300017782|Ga0181380_1052816All Organisms → Viruses → Predicted Viral1453Open in IMG/M
3300017782|Ga0181380_1060893All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium1339Open in IMG/M
3300018421|Ga0181592_10889121Not Available580Open in IMG/M
3300019719|Ga0193977_1001912All Organisms → Viruses → Predicted Viral1751Open in IMG/M
3300019743|Ga0193992_1007830All Organisms → Viruses → Predicted Viral1173Open in IMG/M
3300019751|Ga0194029_1065111Not Available614Open in IMG/M
3300021375|Ga0213869_10448699Not Available519Open in IMG/M
3300021957|Ga0222717_10068867All Organisms → Viruses → Predicted Viral2260Open in IMG/M
3300021957|Ga0222717_10295210Not Available927Open in IMG/M
3300021957|Ga0222717_10301895All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria913Open in IMG/M
3300021958|Ga0222718_10020484All Organisms → Viruses → Predicted Viral4610Open in IMG/M
3300021958|Ga0222718_10102099Not Available1688Open in IMG/M
3300021958|Ga0222718_10207369All Organisms → Viruses → Predicted Viral1066Open in IMG/M
3300021958|Ga0222718_10461161Not Available622Open in IMG/M
3300021959|Ga0222716_10058687Not Available2704Open in IMG/M
3300021959|Ga0222716_10514464Not Available670Open in IMG/M
3300021960|Ga0222715_10154249All Organisms → Viruses → Predicted Viral1419Open in IMG/M
3300021964|Ga0222719_10312509All Organisms → Viruses → Predicted Viral1013Open in IMG/M
3300022074|Ga0224906_1164859All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria619Open in IMG/M
3300022198|Ga0196905_1035074All Organisms → Viruses → Predicted Viral1487Open in IMG/M
3300022198|Ga0196905_1055840All Organisms → Viruses → Predicted Viral1112Open in IMG/M
3300022198|Ga0196905_1151608Not Available596Open in IMG/M
3300022198|Ga0196905_1165907Not Available563Open in IMG/M
3300025048|Ga0207905_1014778All Organisms → Viruses → Predicted Viral1326Open in IMG/M
3300025071|Ga0207896_1029179All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon TMED97940Open in IMG/M
3300025103|Ga0208013_1017773All Organisms → Viruses → Predicted Viral2146Open in IMG/M
3300025120|Ga0209535_1098989Not Available1049Open in IMG/M
3300025120|Ga0209535_1138115Not Available793Open in IMG/M
3300025137|Ga0209336_10103607Not Available800Open in IMG/M
3300025138|Ga0209634_1117118All Organisms → Viruses → Predicted Viral1144Open in IMG/M
3300025276|Ga0208814_1009952All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED1043436Open in IMG/M
3300025508|Ga0208148_1110830Not Available578Open in IMG/M
3300025646|Ga0208161_1058996All Organisms → Viruses → Predicted Viral1189Open in IMG/M
3300025646|Ga0208161_1065718All Organisms → Viruses → Predicted Viral1097Open in IMG/M
3300025647|Ga0208160_1053762All Organisms → Viruses → Predicted Viral1137Open in IMG/M
3300025647|Ga0208160_1062051All Organisms → Viruses → Predicted Viral1035Open in IMG/M
3300025671|Ga0208898_1038928All Organisms → Viruses → Predicted Viral1843Open in IMG/M
3300025687|Ga0208019_1044426All Organisms → Viruses → Predicted Viral1569Open in IMG/M
3300025771|Ga0208427_1031656All Organisms → Viruses → Predicted Viral2021Open in IMG/M
3300025840|Ga0208917_1144765All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria831Open in IMG/M
3300025853|Ga0208645_1282817Not Available531Open in IMG/M
3300025889|Ga0208644_1057528All Organisms → Viruses → Predicted Viral2113Open in IMG/M
3300026187|Ga0209929_1039056All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.1394Open in IMG/M
3300027906|Ga0209404_10559280Not Available762Open in IMG/M
3300028125|Ga0256368_1027320All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1016Open in IMG/M
3300032136|Ga0316201_11768789Not Available509Open in IMG/M
3300032277|Ga0316202_10035819All Organisms → Viruses → Predicted Viral2364Open in IMG/M
3300034418|Ga0348337_152454Not Available650Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous34.00%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine20.00%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater12.00%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water11.00%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient3.00%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water3.00%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment2.00%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean2.00%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine2.00%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine2.00%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.00%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater1.00%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat1.00%
Worm BurrowEnvironmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow1.00%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.00%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine1.00%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh1.00%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300003894Marine microbial communities from the northern Gulf of Mexico hypoxic zone - Cultivation independent assessmentEnvironmentalOpen in IMG/M
3300004280Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_100mEnvironmentalOpen in IMG/M
3300004460Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006790Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007236Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300009428Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55EnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300011128Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, 0.02EnvironmentalOpen in IMG/M
3300011252Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, permeateEnvironmentalOpen in IMG/M
3300017713Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11EnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017724Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17EnvironmentalOpen in IMG/M
3300017742Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017748Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21EnvironmentalOpen in IMG/M
3300017762Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18EnvironmentalOpen in IMG/M
3300017781Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019719Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FRT_4-5_MGEnvironmentalOpen in IMG/M
3300019743Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLC_3-4_MGEnvironmentalOpen in IMG/M
3300019751Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MGEnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300025048Marine viral communities from the Subarctic Pacific Ocean - LP-49 (SPAdes)EnvironmentalOpen in IMG/M
3300025071Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025276Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)EnvironmentalOpen in IMG/M
3300025508Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025646Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025647Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025687Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025771Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025840Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300026187Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028125Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SBEnvironmentalOpen in IMG/M
3300032136Coastal sediment microbial communities from Delaware Bay, Delaware, United States - CS-6 worm burrowEnvironmentalOpen in IMG/M
3300032277Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotiteEnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1016928033300000116MarineMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGQGNYNFSGIKQRIAFNEYKENEDE*
JGI24006J15134_1001366523300001450MarineMTILIHKTEASRLAYEVSKLNIRETWEFVDTLKNLEDITDATGQGNYNFSGVKQRIAFHLEEVDEWDMLEEVSNET*
JGI24006J15134_1013839023300001450MarineMTIIIHKSEASKLAYEVSKLSVKGVHEFVDYLKTLQDIANQSGQGNHNFSAVKQRIAFNEYKEKL*
JGI24004J15324_1001784323300001472MarineMTILIHKTEASRLAYEVSKLTVKGVHEFVDVLKDLQDIANQTRQGNHNFSAVKQRIAFNKYKEDEDENI*
JGI24004J15324_1002421993300001472MarineMTILIHKTEASRLAYEVSKLTVKGVHEFVDVLKDLQDIANQTRQGNHNFSAVKQRIVLMILRVSGDNYG*
JGI24005J15628_1014999523300001589MarineMTIVIHKTEASXLAYEVSKLNVQEIWEFVDTLKNLEDITDATGQGNYNFSGVKQRIAFHLEEVDEWDMLEEV*
Ga0063241_1020230103300003894MarineMTILVHKTESSRLAHEVSKLNVQEIHEFVDILKKLEDITNVSGEGNFNFSAVKQRIAFNEYTEEM*
Ga0066606_1028077213300004280MarineMTILIHKTEASRLAYEVSNLNVKELWEFVDMLKKLEDITNVSGKGNFNFSAVKQRIAFNEYKESEDEL*
Ga0066222_132188113300004460MarineMTIVIHKTEASRLAYEVSKLNVQEIWEFVDTLKNLEDITDATGQGNYNFSGVKQ
Ga0075462_1003314543300006027AqueousMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITNVTGKGNYNFSGIKQRIAFKEYEEDL*
Ga0075466_105411143300006029AqueousMTIVIHKTEASRLAYEVSKLNVQEIWEFVDTLKNLEDITDATGQGNYNFSGVKQRIAFNELNREV*YGIRRFSKYK*
Ga0075441_1024969633300006164MarineMTILIHKTEASRLAYEVSKLTVKGVHEFVDVLKNLQDIANQTRQGNHNFSAVKQRIAFNEYKEN
Ga0098044_106674453300006754MarineLINKTEASRLAHEVSKLTVKELWEFVDNLKRFEDVENITGKGNFNFSGVKQRIAFNEYTEEVSENE*
Ga0098054_102350023300006789MarineMTILIHKTEASRLAHEVSKLTVKELWEFVDNLKRFEDVENITGKGNFNFSGVKQRIAFNEYTEEVSGDNG*
Ga0098054_118038913300006789MarineHEVSKLTVKELWEFVDNLKRFEDVENITGKGNFTFSGVKQRIAFNEYTEEVSENE*
Ga0098074_103969633300006790MarineMTILVHKTESSRLAHEVSKLNVQEIHEFVDILKKLEDITNVSGEGNFNFSAVKQRIAFNEYKEKKYG*
Ga0070749_1007004973300006802AqueousMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGKGNYNFSGIKQRIAFNEYRENYESNTNKSI*
Ga0070749_1041672233300006802AqueousMAIVIHKTESSRLAHEVSKLNVQEIHEFVDILKKLEDITNVSGEGNFNFSAVKQRIAFNEYMEEM*
Ga0070749_1047313123300006802AqueousMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGKGNYNFSGIKQRIAFNEYRENEDD*
Ga0070754_1019823723300006810AqueousMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGQGNYNFSGIKQRIAFNEYKENEDESNTNKPI*
Ga0070750_1028599823300006916AqueousMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGKGNYNFSGIKQRIAFNEYKENEDAS*KTYKNFTRL*
Ga0070746_1042863023300006919AqueousMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGQGNYNFSGIKQRIAFNEYRENYESNTNKPI*
Ga0075468_1009109313300007229AqueousIKYISRRYNMTIVIHKTEASRLAYEVSKLNVQEIWEFVDTLKNLEDITDATGQGNYNFSGVKQRIAFNELNREA*
Ga0075460_1003956183300007234AqueousMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGKGNYNFSGIKQRIAFNEYKENEDES*
Ga0075463_1003413843300007236AqueousMGGVSMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITNVTGKGNYNFSGIKQRIAFKEYEEDL*
Ga0070752_131584833300007345AqueousMTIVIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGQGNYNFSGIKQRIAFNEYKENEDE*
Ga0070752_137822223300007345AqueousMTIVIHKTEASRLAYEVSKLNVQEIWEFVDTLKNLEDITDATGQGNYNFSGVKQRIAFNELNREV*
Ga0099851_106296833300007538AqueousMTILVHKTEASRLAHEVSKLNVQEIHEFVDILKKLEDITNVSGEGNFNFSAVKQRIAFNEYMEEM*
Ga0099849_128926923300007539AqueousMTILIHKTEASRLAHEVSNLNVKELWEFVDTLKKLEDITNVSGEGNFNFSAVKQRIAFNEYEENEDAS*
Ga0099847_125583923300007540AqueousMTILIHKTEASRLAHEVSNLNVKELWEFVDTLKKLEDITNVSGEGNFNFSAVKQRIAFNEYEDTDNE*
Ga0099850_137444333300007960AqueousMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGKGNYNFSGIKQRIAFNEYRE
Ga0075480_1018886823300008012AqueousMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGQGNYNFSGIKQRIAFNEYKENEDEQQNK*
Ga0102963_102428183300009001Pond WaterMTILIHKTEALKLAYKVNKLTVEELWDFVDELKKLEDVANTTGQGNFNFSAVKQRIAFNEYKED*
Ga0102957_113094833300009027Pond WaterMTIVIHKTESSRLAYEVSKLNVQEIWEFVDTLKNLEDITNATGQGNYNFSGVKQRIAFNELNREA*
Ga0114915_103389543300009428Deep OceanMTILIHKTEASRLAYEVSKLTVKGVHEFVDVLKNLQDIANQTRQGNHNFSAVKQRIAFNEYKENEDE*
Ga0115011_1001550273300009593MarineMTIVVHQTEASRLAHEVNKLNVQEIHEFVDILKKLENIANTSGNGNYNFSAVKQRISFNDYLEQQKGVEV*
Ga0098056_104026833300010150MarineMTILIHKTEASRLAHEVSKLTVKELWEFVDNLKRFEDVENITGKGNFSFSGVKQRIAFNEYTEEVSENE*
Ga0129345_113701243300010297Freshwater To Marine Saline GradientMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGQGNYNFSGIKQRIAFNEYRENEDEKV*
Ga0136656_111940423300010318Freshwater To Marine Saline GradientMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGQGNYNFSGIKQRIAFNEYKENEYEKV*
Ga0129324_1023609043300010368Freshwater To Marine Saline GradientMTILIHKTEASRLAHEVSNLNVKELWEFVDTLKKLEDITNVSGEGNFNFSAVKQRVAFNEYEDTDNE*
Ga0133547_1164845713300010883MarineMTILIHKTEASRLAYEVSKLTVKGVHEFVDVLKDLQDIANQTRQGNHNFSAVKQRIAFNKYKEDEDETGH*
Ga0151669_16131413300011128MarineMTILIHKTEASRLAHEVSNLNVKELWEFVDMLKKLEDITNVSGKGNFNFSAVKQRIAFNKYKENEDGDS*
Ga0151674_100879943300011252MarineMTILIHKTEASRLAHEVSNLNVKELWEFVDMLKKLEDITNVSGKGNFNFSAVKQRIAFNEYKENEDGDS*
Ga0181391_101520573300017713SeawaterMMTILIHKTETSRLAHEVSKLTVKEVWDFVDELKKLEDVANTTGQGNFNFSGVKQRIAFNEYKEEDNE
Ga0181391_106019033300017713SeawaterMTILIHKTEASRLAHEVSNLNVKELWEFVDILKKLEDITNVSGQGNFNFSAIKQRIAFNEYRENEDETN
Ga0181390_105434843300017719SeawaterMTILIHKTETSRLAHEVSKLTVKEVWDFVDELKKLEDVANTTGQGNFNFSGVKQRIAFNEYKEEDNE
Ga0181388_100771593300017724SeawaterMTILIHKTETSRLAHEVSKLTVKEVWDFVDELKKLEDVANTTGQGNFNFSGVKQRIAFNEYKEVDDE
Ga0181399_106474323300017742SeawaterMTILIHKTEALKLAYKVNKLTVEELWDFVDELKKLEDVANTTGQGNFNFSAVKQRIEFNEYKED
Ga0181389_103030453300017746SeawaterMTILIHKTEASRLDHEVSNLNVKELWEFVDILKKLEDITNVSGQGNFNFSAIKQRIAFNEYRENEDETN
Ga0181393_112256223300017748SeawaterMTIIIHKSEASKLAYEVNKLNVKEVHEFVDYLKTLEDTANQSSQGNHNFSAVKQRITFNEHKERNITGS
Ga0181422_101529523300017762SeawaterMTILIHKTEALKLAYKVNKLTVEELWDFVDELKKLEDVANTTGQGNFNFSAVKQRITFNEFKED
Ga0181423_103219613300017781SeawaterIHKSEASKLAYEVNKLNVKEVHEFVDYLKTLEDTANQSSQGNHNFSAVKQRIAFNEHKERNITGS
Ga0181380_105281623300017782SeawaterMTILIHKTEASRLAYEVSKLNVQEIWEFVDTLKNLEDITDDTGQGNFNFSAVKQRIAFNEYKGD
Ga0181380_106089343300017782SeawaterMTILIHKTEALKLAYKVNKLTVEELWDFVDELKKLENVANTTGQGNFNFSAVKQRIAFNEYKED
Ga0181592_1088912123300018421Salt MarshMTIIIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGKGNYNFSGIKQRIAFNEYRENEND
Ga0193977_100191223300019719SedimentMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITNVTGKGNYNFSGIKQRIAFKEYEEDL
Ga0193992_100783023300019743SedimentMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITNVTGKGNYNFSGIKQRIAFKEYEEDLXH
Ga0194029_106511123300019751FreshwaterMGGVSMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITNVTGKGNYNFSGIKQRIAFKEYEEDL
Ga0213869_1044869923300021375SeawaterMTIVIHKTEASRLAYEVSKLNVQEIWEFVDTLKNLEDITDATGQGNYNFSGVKQRIAFNELNREA
Ga0222717_1006886723300021957Estuarine WaterMTILIHKTEASRLAYEVSKLNVQEIWEFVDTLKNLEDVANTTGQGNFNFSAVKQRITFNEFKED
Ga0222717_1029521033300021957Estuarine WaterMTIIIHKSEASKLAYEVNKLNVKEVHEFVDYLKTLEDTANQSSQGNHNFSAVKQ
Ga0222717_1030189523300021957Estuarine WaterMTILIHKTETSRLAHEVSKLTVKEVWDFVDELKKLEDVANTTGQGNFNFSGVKQRIAFNEYKE
Ga0222718_1002048433300021958Estuarine WaterMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGQGNYNFSGIKQRIAFNEYKENEDE
Ga0222718_1010209963300021958Estuarine WaterMTILIHKTEALKLAHEVNKLTVKELWDFVDELKKLEDVANTTGQGNFNFSAVKQRITFNE
Ga0222718_1020736953300021958Estuarine WaterMTILIHKTEALKLAYKVNKLTVEELWDFVDELKKLEDVANTTGQGNFNFSAVKQRI
Ga0222718_1046116123300021958Estuarine WaterMTILIHKTETSRLAHEVSKLTVKEVWDFVDELKKLEDVANTTGQGNFNFSGVKQRIAFNEYKEEITXVTYTTKEH
Ga0222716_1005868723300021959Estuarine WaterMTIIIHKSEASKLAYEVNKLNVKEVHEFVDYLKTLEDTANQSSQGNHNFSAVKQRIAFNEHKERNITGS
Ga0222716_1051446433300021959Estuarine WaterQKGARLMTILIHKTEALKLAYKVNKLTVEELWDFVDELKKLEDVANTTGQGNFNFSAVKQRIAFNEYKED
Ga0222715_1015424943300021960Estuarine WaterMTILIHKTEALKLAYKVNKLTVEELWDFVDELKKLEDVANTTGQGNFNFSAVKQRIAFNEYKGD
Ga0222719_1031250913300021964Estuarine WaterMTILIHKTEALKLAHEVNKLTVKELWDFVDELKKLEDVANTTGQGNFNFSAVKQRITFNEFKED
Ga0224906_116485923300022074SeawaterMMTILIHKTETSRLAHEVSKLTVKEVWDFVDELKKLEDVANTTGQGNFNFSGVKQRIAFNEYKEEITXVTYTTKEH
Ga0196905_103507423300022198AqueousMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGQGNYNFSGIKQRIAFNEYKENEYEKV
Ga0196905_105584053300022198AqueousMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGKGNYNFSGIKQRIAFNEYRESEDD
Ga0196905_115160823300022198AqueousMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGQGNYNFSGIKQRIAFNEYRENYESNTNKSI
Ga0196905_116590723300022198AqueousMTILVHKTEASRLAHEVSKLNVQEIHEFVDILKKLEDITNVSGEGNFNFSAVKQRIAFNEYMEEM
Ga0207905_101477823300025048MarineMTILIHKTEASRLAYEVSKLTVKGVHEFVDVLKDLQDIANQTRQGNHNFSAVKQRIAFNDTKSIGR
Ga0207896_102917933300025071MarineMTILIHKTEASRLAYEVSKLNIRETWEFVDTLKNLEDITDATGQGNYNFSGVKQRIAFHLEEVDEWDMLEEVSNET
Ga0208013_101777323300025103MarineMTILIHKTEASRLAHEVSKLTVKELWEFVDNLKRFEDVENITGKGNFNFSGVKQRIAFNEYTEEVSGDNG
Ga0209535_109898933300025120MarineMTILIHKTEASRLAYEVSNLNVKELWEFVDMLKKLEDITNVSGKGNFNFSAVKQRIAFNEYKETADE
Ga0209535_113811523300025120MarineMTIIIHKSEASKLAYEVSKLSVKGVHEFVDYLKTLQDIANQSGQGNHNFSAVKQRIAFNEYKEKL
Ga0209336_1010360733300025137MarineMTIVIHKTEASRLAYEVSKLNVQEIWEFVDTLKNLEDITDSTGQGNYNFSGVKQRITFNELNREA
Ga0209634_111711833300025138MarineMTIVIHKTEASKLAYEVSKLNVQEIWEFVDTLKNLEDITDATGQGNYNFSGVKQRIAFHLEEVDEWDMLEEV
Ga0208814_100995283300025276Deep OceanMTILIHKTEASRLAYEVSKLTVKGVHEFVDVLKNLQDIANQTRQGNHNFSAVKQRIAFNEYKENEDE
Ga0208148_111083033300025508AqueousMTILIHKTKTSKLAHEVSKLSVKEVWEFVDTLKNLEDITDATGQGNYNFSGVKQRIAFNELNREVXYGIRRFSKYK
Ga0208161_105899643300025646AqueousMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGKGNYNFSGIKQRIAFNEYRENEDD
Ga0208161_106571813300025646AqueousMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGQGNYNFSGIKQRIAFNE
Ga0208160_105376243300025647AqueousHKTEASRLAHEVSKLNVQEIHEFVDILKKLEDITNVSGEGNFNFSAVKQRIAFNEYMEEM
Ga0208160_106205133300025647AqueousMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGQGNYNFSGIKQRIAFNEYKENEDASXKTYKNFTRL
Ga0208898_103892833300025671AqueousMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGQGNYNFSGIKQRIAFNEYRENYESNTNKPI
Ga0208019_104442633300025687AqueousMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGQGNYNFSGIKQRIAFNEYKENEDAS
Ga0208427_103165633300025771AqueousMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGQGNYNFSGIKQRIAFNEYKENYESNTNKPI
Ga0208917_114476513300025840AqueousMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGQGNYNFSGIKQRIAFNEYRENYESN
Ga0208645_128281713300025853AqueousMTILIHKTEASRLAHEISKFDIQELWEFVDTLKKLEDITDATGQGNYNFSGIKQRIAFNEYKENEDESNTNKPI
Ga0208644_105752873300025889AqueousMTILIHKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGKGNYNFSGIKQRIAFNEYRENYESNTNKSI
Ga0209929_103905653300026187Pond WaterMTILIHKTEALKLAYKVNKLTVEELWDFVDELKKLEDVANTTGQGNFNFSAVKQRIAFNEYKED
Ga0209404_1055928033300027906MarineMTIVVHQTEASRLAHEVNKLNVQEIHEFVDILKKLENIANTSGNGNYNFSAVKQRISFNDYL
Ga0256368_102732023300028125Sea-Ice BrineMTILIHKTEASRLAYEVSNLNVKELWEFVDMLKKLEDITNVSGKGNFNFSAVKQRIAFNEYKESEDEL
Ga0316201_1176878923300032136Worm BurrowMTIVIHKTEASRLAYEVSKLNVQEIWEFVDTLKNLEDITDATGQGNYNFSGVKQRIAFNELNREVXYGIRRFSKY
Ga0316202_1003581933300032277Microbial MatMTIVIHKTEASRLAYEVSKLNVQEIWEFVDTLKNLEDITDATGQGNYNFSGVKQRIAFNELNREVXYGIRRFSKYK
Ga0348337_152454_443_6493300034418AqueousKTEASRLAHEVSKFDIQELWEFVDTLKKLEDITDATGQGNYNFSGIKQRIAFNEYKENEDESNTNKPI

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Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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