Metagenome Family F105897

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F105897
Family Type	Metagenome
Number of Sequences	100
Average Sequence Length	45 residues
Representative Sequence	MYCDTSKIVIERTKKDVVSNIVLKKHYANTWTASSDIYAIYYKSG
Number of Associated Samples	69
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	87.50 %
% of genes near scaffold ends (potentially truncated)	8.00 %
% of genes from short scaffolds (< 2000 bps)	8.00 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (95.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater (42.000 % of family members)
Environment Ontology (ENVO)	Unclassified (97.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (99.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.81% β-sheet: 16.44% Coil/Unstructured: 65.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF01844	HNH	18.00
PF01048	PNP_UDP_1	10.00
PF03851	UvdE	9.00
PF00156	Pribosyltran	6.00
PF07728	AAA_5	3.00
PF02384	N6_Mtase	3.00
PF03013	Pyr_excise	3.00
PF04023	FeoA	3.00
PF10544	T5orf172	2.00
PF07460	NUMOD3	1.00
PF00908	dTDP_sugar_isom	1.00
PF14236	DUF4338	1.00
PF13489	Methyltransf_23	1.00
PF13578	Methyltransf_24	1.00
PF03567	Sulfotransfer_2	1.00
PF13759	2OG-FeII_Oxy_5	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	10.00
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	10.00
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	10.00
COG4294	UV DNA damage repair endonuclease	Replication, recombination and repair [L]	9.00
COG1918	Fe2+ transport protein FeoA	Inorganic ion transport and metabolism [P]	3.00
COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase or related enzyme	Cell wall/membrane/envelope biogenesis [M]	1.00

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.00 %
All Organisms	root	All Organisms	5.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.00 %
Viruses	superkingdom	All Organisms → Viruses	3.00 %
cellular organisms	root	All Organisms → cellular organisms	2.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.00 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.00 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.00 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	1.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.00 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009435\|Ga0115546_1351349	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300010151\|Ga0098061_1123054	Not Available	954	Open in IMG/M
3300017740\|Ga0181418_1060236	Not Available	937	Open in IMG/M
3300017775\|Ga0181432_1063581	All Organisms → Viruses → Predicted Viral	1054	Open in IMG/M
3300020312\|Ga0211542_1024681	All Organisms → Viruses → Predicted Viral	1230	Open in IMG/M
3300025138\|Ga0209634_1308323	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	540	Open in IMG/M
3300027522\|Ga0209384_1025873	All Organisms → Viruses → Predicted Viral	1794	Open in IMG/M
3300027714\|Ga0209815_1176100	Not Available	670	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Strait	Environmental → Aquatic → Marine → Strait	42.00%
Oceanic	Environmental → Aquatic → Marine → Oceanic	40.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified	13.00%
Pelagic	Environmental → Aquatic → Marine → Pelagic	4.00%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	42.00%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	38.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	13.00%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	4.00%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	2.00%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	42.00%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	37.00%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	13.00%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	2.00%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	2.00%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	1.00%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	1.00%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	1.00%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006332	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0200m	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300006925	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG	Environmental	Open in IMG/M
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009435	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413	Environmental	Open in IMG/M
3300009601	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_38	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300017703	Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaG	Environmental	Open in IMG/M
3300017704	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaG	Environmental	Open in IMG/M
3300017713	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11	Environmental	Open in IMG/M
3300017714	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017724	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017728	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24	Environmental	Open in IMG/M
3300017731	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16	Environmental	Open in IMG/M
3300017733	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23	Environmental	Open in IMG/M
3300017740	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13	Environmental	Open in IMG/M
3300017742	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21	Environmental	Open in IMG/M
3300017743	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17	Environmental	Open in IMG/M
3300017744	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23	Environmental	Open in IMG/M
3300017745	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017751	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017760	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020312	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX556125-ERR598977)	Environmental	Open in IMG/M
3300020411	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)	Environmental	Open in IMG/M
3300020417	Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)	Environmental	Open in IMG/M
3300020421	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300025072	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)	Environmental	Open in IMG/M
3300025096	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)	Environmental	Open in IMG/M
3300025118	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300027522	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)	Environmental	Open in IMG/M
3300027714	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)	Environmental	Open in IMG/M
3300027771	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes)	Environmental	Open in IMG/M
3300031775	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24006J15134_102562351	3300001450	Marine	MDKYCDTSKIVIERTKKDVVSNIVLKKHYANTWTASSDIYAIYYKSGEHK
Ga0075441_101618303	3300006164	Marine	MDKYCNTSKIVIERTKKDVVSNIIKNKHYAKTWTASSDIYA
Ga0075441_103159331	3300006164	Marine	MTYCDTSKIVIERTKKDVVSNIIKNKHYAKTWTASSDI
Ga0075441_103266111	3300006164	Marine	MYCDTSKIIIERTKKNVVSNIIKNKHYAKTWTASSDIYAIYYKSGEHK
Ga0068500_13380511	3300006332	Marine	MYCDTSKIVIERTKKDVVSNIVLNKHYANTWTASSDIYAIYY
Ga0098033_10486553	3300006736	Marine	MEYCDTSKIVIERTNKDVVYNLVTKKHYANTWTASSDI
Ga0098037_11160263	3300006737	Marine	VKYCDTSKIVIERTKKDVVSNIVLNKHYANTWTASSDIYAIYYKSGE
Ga0098035_11946034	3300006738	Marine	MYCDTSKIVIERTNKDVVYNIVTKKHYANTWTASSDIYAIYYDSGE
Ga0098042_11118291	3300006749	Marine	MKYCDTSKIVIERTKKEIVYDMILNKHYANTWTASSDIY
Ga0098048_11632071	3300006752	Marine	MYCDTSKIVIEKAKKDIVYDMVVNKHYAKCWTAASDIYAIYYKSGKHKFFD
Ga0098044_10142388	3300006754	Marine	MYCDTSKIVIERTKKSVVSNIILQKHYAQTWTASSDIYAIY
Ga0098044_10586584	3300006754	Marine	MKYCDISKIVIEPTNKDVVHNIVKKKHYAKTWTAASNIYAI
Ga0066372_105477552	3300006902	Marine	MLVDKNKVVIERSKKEVVYNMVVKKHYANTWTASSDIYAI
Ga0098050_10743761	3300006925	Marine	MYCDTSKIVIERTKKSVVSNIILQKHYAQTWTASSD
Ga0098050_10976291	3300006925	Marine	MKYCDTSKIVIERCNKETVYNIVKKKHYAKTWTASSNIYGIYYDSGEHQFF
Ga0098034_11725371	3300006927	Marine	MYCDISKIVIERTNKDVVYNIVTKKHYANTWTASSD
Ga0098041_12145462	3300006928	Marine	MKYCDTSKIVIEQTKKSVVSNIILQKHYAQTWTASSDIY
Ga0098041_12159321	3300006928	Marine	VYCDTSKIVIERTNKDVVYNIITKKHYANTWTASSN
Ga0098041_12918662	3300006928	Marine	MEYCDTSKIVIERTNKDVVYNIITKKHYANTWTASSDIYAIYYDSGEHQFFSGKE
Ga0114995_107305562	3300009172	Marine	MKYCDTSKIVIERTKKDVVSNIVLKKHYANTWTASSDIYAIY
Ga0115545_12109482	3300009433	Pelagic Marine	MYCDTSKIVIERTKKDVVSNIVLKKHYANTWTASSDIYAIYYKSG
Ga0115546_13513492	3300009435	Pelagic Marine	MYCDTSKIVIERTKKDVVSNIVLKKHYANTWTASSDIYAIYYKSGEHKFFDGD
Ga0114914_10304591	3300009601	Deep Ocean	MYCNTSKIVIERTKKDVVSNIIKNKHYAKTWTASSDIYAIYY
Ga0115000_104981973	3300009705	Marine	MYCDTSKIVIERTKKDVVSNIIKNKHYAKTWTASSDIYAIYYKSG
Ga0115012_103878601	3300009790	Marine	MEYCDISKIVIEPTKKDVVYKLVTDKHYAGTWTASSNMYAVYYDCGEHQFF
Ga0098049_10947681	3300010149	Marine	LNQYCNTNNIVIERSKKEVVYNIITKKHYANTWTASSDIYAIYYKTG
Ga0098056_10417054	3300010150	Marine	MSDYCDTSKIVIERTKKEVVYDMIVNKHYANTWTASSDI
Ga0098056_10685634	3300010150	Marine	MYCDTSKIVIEPTNKDVVYNIITKKHYANTWTASSNMYAIYHDCGEHKFF
Ga0098061_11230541	3300010151	Marine	MWVDKNNINIVQSNKETVYNIVKKKHYAKAWTASSNIYAIYYKDGKHKFFDDDNYKLIGC
Ga0098061_12450683	3300010151	Marine	MIGKIMYCDTSKIVIERCNKETVYNIIKKKHYAKTWTASSNIY
Ga0098059_12795281	3300010153	Marine	VTNNYCDTSKIVIERTNKDVVYNIITKKHYANTWTAAT
Ga0098047_100899701	3300010155	Marine	MYCDTSKIVIERCNKETVHNIVKKKHYAKTWTASSNIYAIYY
Ga0133547_111355971	3300010883	Marine	MKYCDTSKIVIERTKKDVVSNIVLKKHYANTWTASSDIYAIYYKSGEHKFFDG
Ga0163111_113068342	3300012954	Surface Seawater	MYCDTSKIVIERTKKEIVYDMIMNKHYANTWTASSDIYAIYYR
Ga0181367_10063933	3300017703	Marine	MNYCNTSKIVIERSTKDVVYNIIKKKHYAKTWTASSDIYAIYYKSGEHKFFG
Ga0181367_10755521	3300017703	Marine	VYCDTSKIVIERTNKDVVYNIITKKHYANTWTASSDIYGIYYDSGEHRF
Ga0181371_10335484	3300017704	Marine	MYCDTSKIVIERCNKETVYNIIKKKHYAKTWTASSNIYAIYYDSGEHQFFDGKQ
Ga0181371_10522883	3300017704	Marine	MYCDTSKIVIERCNKETVYNIIKKKHYAKTWTASSNIYAIYYDSGEHQFFDGKQL
Ga0181391_10374721	3300017713	Seawater	MYCDTSKIVIERTKKDVVSNIVLNKHYANTWTASSDIYAIYYKSGEHKFFDG
Ga0181412_10508321	3300017714	Seawater	MYCDTSKIVIERTKKDVVSNIVLKKHYANTWTASSDIYAIYYKSGE
Ga0181390_10244114	3300017719	Seawater	MKYCDTSKIVIEQTKKSVVSNIILQKHYAQTWTASSNIYAI
Ga0181388_11540882	3300017724	Seawater	MYCDTSKIVIKKSKKDIVYDMVVNKHYANTWTASSDIYAIYYKDGEHKFFDE
Ga0181398_10137811	3300017725	Seawater	MKYCDTSKIVIERTKKDVVSNIVLQKHYANTWTASSDIYAIYYKSGEHKFFD
Ga0181398_10171101	3300017725	Seawater	MKYCDTSKIVIERTKKDVVSNIVLNKHYANTWTASSDIYAIYYKSGEHKFFDG
Ga0181419_10455281	3300017728	Seawater	MYCDTSKIVIERTKKDVVSNIVLQKHYANTWTASSDIY
Ga0181416_10300121	3300017731	Seawater	MTFVDKKNIVIERSNKKVVYNMVVNKHYANTWTASSDIYAIYYKSGEHQ
Ga0181416_10591471	3300017731	Seawater	MEYCDTSKIVIERTKKDVVSNIVLKKHYANTWTASSDIYAIYYKSG
Ga0181416_11262805	3300017731	Seawater	MSKYCNTDNIVIERTKKEVVHNMVVNKHYANTWTASSDIYAIYYK
Ga0181426_10443483	3300017733	Seawater	MYCDTSKIIIERTKKEVVYDMVVNKHYAKCWTAASDIYAIYY
Ga0181418_10231431	3300017740	Seawater	MEYCDTSKIVIERTKKDVVSNIVLNKHYANTWTASS
Ga0181418_10602361	3300017740	Seawater	MEYCDTSKIVIERTKKDVVSNIVLKKHYANTWTASSDIYAIYYKSGEHKFFDG
Ga0181399_10676621	3300017742	Seawater	MYCDTSKIVIERTKKDVVSNIVLKKHYANTWTASSDIYAIYYKSGEHKF
Ga0181402_11879942	3300017743	Seawater	MKYCDTSKIVIERTKKDVVSNIVLNKHYANTWTASSDIYAIYYKSGE
Ga0181397_10778793	3300017744	Seawater	MTFVDKKNIVIERSNKKVVYNMVVNKHYANTWTASS
Ga0181397_11079771	3300017744	Seawater	MYCDTSKIVIERCNKETVYNIVKKKHYAKTWTASSNIYAIYYDSGEHQF
Ga0181427_10046729	3300017745	Seawater	MKYCDTSKIVIERTKKDVVSNIVLNKHYANTWTASSDIYAIYYKSG
Ga0181427_11697131	3300017745	Seawater	MKYCDTSKIVIERTKKDVVSNIVLKKHYANTWTASSDIYAIYYKSGEHK
Ga0181427_11803352	3300017745	Seawater	MKYCDTSKIVIERTKKDVVSNIVLQKHYANTWTASSDIYAIYY
Ga0181405_11375552	3300017750	Seawater	MYCDTSKIVIERTKKDVVSNIVLKKHYANTWTASSDIYAIYYKSGEH
Ga0187219_10630301	3300017751	Seawater	MYCDTSKIVIERTKKDVVSNIVLNKHYANTWTASSDIYAIYYKSGEHK
Ga0181420_11239021	3300017757	Seawater	MYCDTSKIVIKKSKKDIVYDMVVNKHYANTWTASSDIYAIYYK
Ga0181414_12009871	3300017759	Seawater	MSYVDTNKIVIERSNKKVVLNMVTKKHYANTWTASSDIYA
Ga0181408_11044513	3300017760	Seawater	MYCDTSKIVIERCNKETVHNIVKKKHYAKTWTASSNIYAIYYDSGEHQ
Ga0181406_10387151	3300017767	Seawater	MYCDISKIVIEPTKKDVVYKLVTGKHYAGTWTASS
Ga0187221_11024721	3300017769	Seawater	MYCDTSKIVIERTKKDVVSNIVLKKHYANTWTASSDIYAIYYKSGEHKFF
Ga0181386_12139662	3300017773	Seawater	MKYCDTSKIVIERTKKDVVSNIVLQKHYANTWTASS
Ga0181432_10015641	3300017775	Seawater	MNIYCDTSKIVIERCNKETVYNIIKKKHYAKTWTASSNIYGIYYDSGEHQFF
Ga0181432_10023301	3300017775	Seawater	MTEYCDTSKIVIERCNKETVYNIVKKKHYAKTWTASSDIYGIYYDS
Ga0181432_10558951	3300017775	Seawater	MKYCNTNKIVIERTNKATVYNMVTKKHYANTWTASSDVYAI
Ga0181432_10635812	3300017775	Seawater	MADEVKYCDTSKIVIERCNKETVYNIVKKKHYAKTWTASSNIYGIYYDSGEHRFFDGK
Ga0181432_11419521	3300017775	Seawater	MTKFVNTDNIVIERSNKKVVLNIVTKKHYANTWTASSDIYAI
Ga0181432_11480543	3300017775	Seawater	VTNYCDTSKIVIERTNKDVVYNIVTKKHYANTWTASSDIYA
Ga0181432_11526943	3300017775	Seawater	MYCDTSKIVIERTNKDVVYNLVTKKHYANTWTASSDIYAIYYDSGEHQFFSGK
Ga0181432_11599931	3300017775	Seawater	MNNYCDISKIVIERCNKETVYNIVKKKHYAKTWTAS
Ga0181432_11609661	3300017775	Seawater	MNYCDTSKIVIERCNKETVYNIIKKKHYSKTWTAS
Ga0181432_11824222	3300017775	Seawater	MKYCNTSKIVIERTNKDVVYNLVTKKHYANTWTASSDIYAIYYDSGE
Ga0181432_11929023	3300017775	Seawater	MTYCDTSKIVIERTNKDVVYNIITKKHYANTWTASSDIYGIYYDCGE
Ga0181432_12311793	3300017775	Seawater	MADEMNYCDTSRIVIERCNKETVYSIVKKKHYAKTWTASSNIYGIYYDSGEHK
Ga0181432_12969191	3300017775	Seawater	MTKYCDTSKIVIERTNKNVVYNIVTKKHYANTWTASSDIYGIYYDSG
Ga0181380_10721862	3300017782	Seawater	MEYCDTSKIVIERTKKDVVSNIVLKKHYANTWTASSDIYAIYYKSGEH
Ga0206124_100923911	3300020175	Seawater	MKYCDTSKIVIERTKKDVVSNIVLQKHYANTWTASSDIYAIYYKSGEHK
Ga0211542_10246814	3300020312	Marine	MYCDTSKIVIERTKKEIVYDMIMNKHYANTWTASSDIYAIYYRDGEHKFFDSDN
Ga0211587_101190953	3300020411	Marine	MEYCDTSKIVIERTKKDVVSNIVLQKHYAQTWTASSDIYAIYY
Ga0211528_100870983	3300020417	Marine	MYCDTSKIVIERTKKSVVSNIILQKHYAQTWTASSDIYAI
Ga0211653_102605813	3300020421	Marine	MYCDTSKIVIERTKKSVVSNIILQKHYAQTWTASSDIYAIYYKSGE
Ga0211708_104594961	3300020436	Marine	MYCDTSKIVIERTKKDVVSNIVLNKHYANTWTASSD
Ga0211543_104373211	3300020470	Marine	MTKYCDTSKIVIERCNKETVYNIIKKKHYAKTWTASSNIYGIYYDSGNHKFFD
Ga0211543_105853501	3300020470	Marine	MNKYCDTNKIVIERSKKEVVYNMVVNKHYANTWTASSDIYAIYYKTGKHQFFND
Ga0206123_101353121	3300021365	Seawater	MKYCDTSKIVIERTKKDVVSNIVLKKHYANTWTASSDIY
Ga0208920_10358803	3300025072	Marine	MYCDTSKIVIERTKKSVVSNIILQKHYAQTWTASSDIYAIYYKSGEHKF
Ga0208011_10741611	3300025096	Marine	MYCDTSKIVIERTKKSVVSNIILQKHYAQTWTASSDIYAIYYKSG
Ga0208790_11044433	3300025118	Marine	MEYCDTSKIVIERTNKDIVYNLVTKKHYANTWTASSDIYAIYYDSGEH
Ga0208790_11466354	3300025118	Marine	MQYCDTSKIVIERCNKETVYNIVKKKHYAKTWTASSDIYGIYYDSGEHR
Ga0209336_100796743	3300025137	Marine	MYCDTSKIIIERTKKEVVYDMVVNKHYAKCWTAASDIYAIYYK
Ga0209634_13083233	3300025138	Marine	MDKYCDTSKIVIERTKKDVVSNIVLKKHYANTWTASSDIYAIYYKSGEHKFFDGD
Ga0209645_11748881	3300025151	Marine	MYCDTSKIVIERTNKDVVYNLVTKKHYANTWTASSDI
Ga0209384_10258736	3300027522	Marine	MYCDTSKIVIERTKKDVVSNIIKNKHYAKTWTASSDIY
Ga0209815_11761002	3300027714	Marine	MKYCDTSKIVIERTKKDVVSNIIKNKHYAKTWTASSDIYAIYYKSGEHKFFDGD
Ga0209279_101791041	3300027771	Marine	MTYCNTSNIVIERTKKDVVSNIIKNKHYAKTWTASSDIYAIYYK
Ga0315326_108320191	3300031775	Seawater	MYCDTSKIVIERTKKDVVSNIVLKKHYANTWTASSY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F105897

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences