NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F105985

Metagenome Family F105985

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105985
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 101 residues
Representative Sequence EAVPAEPVPDRRKVQFVRGKLLRVDCTQSPAAILTIRTGARTMRLRTDNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEIQ
Number of Associated Samples 87
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 98.00 %
% of genes from short scaffolds (< 2000 bps) 83.00 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction Yes
3D model pTM-score0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(8.000 % of family members)
Environment Ontology (ENVO) Unclassified
(43.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(50.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 2.54%    β-sheet: 38.98%    Coil/Unstructured: 58.47%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
b.40.4.0: automated matchesd6nrza16nrz0.76046
b.40.4.7: Phage ssDNA-binding proteinsd1je5a_1je50.73684
b.40.4.0: automated matchesd6ildb16ild0.72855
b.40.4.0: automated matchesd6hcwa16hcw0.72838
b.40.4.0: automated matchesd3nema13nem0.70959

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF00313CSD 74.00
PF03631Virul_fac_BrkB 11.00
PF13380CoA_binding_2 1.00
PF12698ABC2_membrane_3 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG1295Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)Function unknown [S] 11.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.00 %
UnclassifiedrootN/A1.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918007|ConsensusfromContig144004All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium602Open in IMG/M
3300002245|JGIcombinedJ26739_100177289All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2016Open in IMG/M
3300002245|JGIcombinedJ26739_100689751All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium899Open in IMG/M
3300002245|JGIcombinedJ26739_101500230All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium569Open in IMG/M
3300005093|Ga0062594_102200458All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium596Open in IMG/M
3300005290|Ga0065712_10108164All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1877Open in IMG/M
3300005327|Ga0070658_10622571All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium936Open in IMG/M
3300005331|Ga0070670_101218543All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium688Open in IMG/M
3300005335|Ga0070666_11217096All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium561Open in IMG/M
3300005355|Ga0070671_100465781All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1085Open in IMG/M
3300005356|Ga0070674_101858064All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium547Open in IMG/M
3300005437|Ga0070710_10096696All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1751Open in IMG/M
3300005445|Ga0070708_101587602All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium609Open in IMG/M
3300005530|Ga0070679_101751176All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium569Open in IMG/M
3300005569|Ga0066705_10779833All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium571Open in IMG/M
3300005614|Ga0068856_101962486All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium596Open in IMG/M
3300005617|Ga0068859_102496028All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium569Open in IMG/M
3300005718|Ga0068866_10072537All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1824Open in IMG/M
3300005719|Ga0068861_100489052All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1110Open in IMG/M
3300006041|Ga0075023_100014857All Organisms → cellular organisms → Bacteria2076Open in IMG/M
3300006050|Ga0075028_100148963All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1234Open in IMG/M
3300006057|Ga0075026_100766945All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium582Open in IMG/M
3300006059|Ga0075017_100269778All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1249Open in IMG/M
3300006163|Ga0070715_10422549All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium746Open in IMG/M
3300006173|Ga0070716_100334799All Organisms → cellular organisms → Bacteria1066Open in IMG/M
3300006903|Ga0075426_11013180All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium628Open in IMG/M
3300006914|Ga0075436_100609260All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium805Open in IMG/M
3300009012|Ga0066710_101651923All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium978Open in IMG/M
3300009098|Ga0105245_11112667All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium836Open in IMG/M
3300009174|Ga0105241_10841245All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium848Open in IMG/M
3300009177|Ga0105248_10040823All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5202Open in IMG/M
3300009545|Ga0105237_10281916All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1664Open in IMG/M
3300009545|Ga0105237_12113970All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium572Open in IMG/M
3300009545|Ga0105237_12424120All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium535Open in IMG/M
3300010373|Ga0134128_12848415All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300010397|Ga0134124_10359071All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1375Open in IMG/M
3300012096|Ga0137389_10158514All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1859Open in IMG/M
3300012923|Ga0137359_10043291All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3902Open in IMG/M
3300012924|Ga0137413_10802339All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium723Open in IMG/M
3300012955|Ga0164298_11332071All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium551Open in IMG/M
3300012961|Ga0164302_11068960All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium634Open in IMG/M
3300012961|Ga0164302_11205852All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium605Open in IMG/M
3300012985|Ga0164308_11007497All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium741Open in IMG/M
3300014325|Ga0163163_10185353All Organisms → cellular organisms → Bacteria2129Open in IMG/M
3300014969|Ga0157376_10145305All Organisms → cellular organisms → Bacteria2132Open in IMG/M
3300014969|Ga0157376_12088441All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium605Open in IMG/M
3300014969|Ga0157376_12138832All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium598Open in IMG/M
3300015264|Ga0137403_11387765All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium550Open in IMG/M
3300015374|Ga0132255_100543221All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1712Open in IMG/M
3300015374|Ga0132255_100919925All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1308Open in IMG/M
3300017792|Ga0163161_10407763All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1091Open in IMG/M
3300017993|Ga0187823_10004175All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3261Open in IMG/M
3300019789|Ga0137408_1055115All Organisms → cellular organisms → Bacteria → Acidobacteria2586Open in IMG/M
3300019879|Ga0193723_1091682All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium864Open in IMG/M
3300020062|Ga0193724_1021187All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1383Open in IMG/M
3300021168|Ga0210406_10481360All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium984Open in IMG/M
3300021178|Ga0210408_10590143All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium880Open in IMG/M
3300021180|Ga0210396_10812418All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium802Open in IMG/M
3300021479|Ga0210410_10126257All Organisms → cellular organisms → Bacteria2270Open in IMG/M
3300025912|Ga0207707_11177338All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium621Open in IMG/M
3300025914|Ga0207671_11435247All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium534Open in IMG/M
3300025916|Ga0207663_11116675All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium634Open in IMG/M
3300025920|Ga0207649_11585819All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium518Open in IMG/M
3300025923|Ga0207681_10084717All Organisms → cellular organisms → Bacteria2248Open in IMG/M
3300025925|Ga0207650_11018808All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium704Open in IMG/M
3300025938|Ga0207704_10633270All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium879Open in IMG/M
3300025939|Ga0207665_10342130All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1127Open in IMG/M
3300025944|Ga0207661_10072993All Organisms → cellular organisms → Bacteria2809Open in IMG/M
3300025981|Ga0207640_10007419All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae6052Open in IMG/M
3300025986|Ga0207658_10250586All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1504Open in IMG/M
3300026078|Ga0207702_10007210All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis9512Open in IMG/M
3300026312|Ga0209153_1129486All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium955Open in IMG/M
3300026482|Ga0257172_1062298All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium684Open in IMG/M
3300026530|Ga0209807_1188347All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium742Open in IMG/M
3300026557|Ga0179587_10539567All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium766Open in IMG/M
3300027535|Ga0209734_1027088All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1062Open in IMG/M
3300027565|Ga0209219_1045893All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1091Open in IMG/M
3300027610|Ga0209528_1068746All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium784Open in IMG/M
3300027727|Ga0209328_10137501All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium744Open in IMG/M
3300027846|Ga0209180_10104178All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1619Open in IMG/M
3300027875|Ga0209283_10826664All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300027894|Ga0209068_10332167All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium858Open in IMG/M
3300027910|Ga0209583_10017402All Organisms → cellular organisms → Bacteria2226Open in IMG/M
3300027910|Ga0209583_10062302All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1346Open in IMG/M
3300028673|Ga0257175_1003937All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1928Open in IMG/M
3300028673|Ga0257175_1031763All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium921Open in IMG/M
3300028673|Ga0257175_1057294All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300028828|Ga0307312_10053810All Organisms → cellular organisms → Bacteria2411Open in IMG/M
(restricted) 3300031197|Ga0255310_10089922All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium820Open in IMG/M
3300031231|Ga0170824_116845647All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1003Open in IMG/M
3300031231|Ga0170824_121695833All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium866Open in IMG/M
3300031446|Ga0170820_15291652All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium860Open in IMG/M
3300031474|Ga0170818_106674711All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium609Open in IMG/M
3300031820|Ga0307473_10605862All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium757Open in IMG/M
3300032180|Ga0307471_103307260All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium571Open in IMG/M
3300032828|Ga0335080_10158610All Organisms → cellular organisms → Bacteria2503Open in IMG/M
3300032828|Ga0335080_12039117All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium555Open in IMG/M
3300032892|Ga0335081_12128172All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium594Open in IMG/M
3300034195|Ga0370501_0201293All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium702Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil8.00%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds7.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil7.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere6.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere5.00%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil4.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.00%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil1.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.00%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.00%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.00%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918007Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_allEnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017993Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300020062Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1EnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026482Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-BEnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027535Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027610Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027727Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300028673Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-BEnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300034195Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
A_all_C_007902402140918007SoilDAGTAGGKHSTPGFVETAPDRRKVQFLQGKLVSVDCSQPPSATLKVAVGAQIMRLRTADYKSLLLVGADEFSCGWLDRPIVVNYKAGGKADGDLVSVEVQ
JGIcombinedJ26739_10017728933300002245Forest SoilAGPANPAQTAPRTATDSDADDASSAQNEAVPSEPVPDRRKVQFVRGKLMKVDCSQNPAAILTVRTSSRTMRLRTDDYKSLLLVGADEFSCDWTDRAVVANYKAGGKADGDLVSVEVQ*
JGIcombinedJ26739_10068975113300002245Forest SoilDASSAQGDAAPAEPVPDRRKVQFVRGRLIKVDCTQNPGAILTVRTNSRTLKLRTDNYKLLLLVGADEFSCDWTDRAVVANYKAGGKADGDLVSVEVQ*
JGIcombinedJ26739_10150023023300002245Forest SoilEPVPDRRKVQFVRGRLIKVDCTQNAGAILTVRTNSRTLKLRTDNYKSLLLVGADEFSCNWTDRAVVANYKAGGKADGDLVSVEVQ*
Ga0062594_10220045823300005093SoilRKVQFVRGRLIKVDCSQNPGAILTVRTNSRTLRLRTDNYKSLLLVGADEFSCDWVDRAVIANYKAGGKADGDLVSVEVQ*
Ga0065712_1010816433300005290Miscanthus RhizosphereVQFVRGKLLRVDCTQSPEAILTIRTGARTMRLRADNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEIQ*
Ga0070658_1062257123300005327Corn RhizosphereTLKKYGVLPQDNASQNGAGSPVSSTSDNDEEDANSGKAEAVPAEPVPDRRKVQFVRGKLLRVDCTQSPEAILTIRTGARTMRLRADNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEIQ*
Ga0070670_10121854323300005331Switchgrass RhizosphereAVPAEPVPDRRKVQFVRGKLLRVDCTQSPEAILTIRTGARTMRLRADNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEIQ*
Ga0070666_1121709613300005335Switchgrass RhizosphereQQNASKNSQLDPAAAVSSVPEHEADDTSSTQSEAAPAEPVPDRRKVQFVRGRLIKVDCSQNPGAILTVRTNSRTLRLRTDNYKSLLLVGADEFSCDWADRAVIANYKAGGKADGDLVSVEVQ*
Ga0070671_10046578133300005355Switchgrass RhizosphereETATSGDSEDDTSAQAQAPPAEPAIDRRKAQFVRGKLTRVDCSQSPLAILTVRTSARTLKLRTADYKSLLVVGADEFSCEWTERAVIANYKAGGKNDGDLVSIEVQ*
Ga0070674_10185806413300005356Miscanthus RhizosphereAGGPAPASAENDEEDAHSGSAEAAPTEPVPDRRKIQFVRGKLLKVDCTHSPVAILTIRTGARTMRLRTDDYKSLLLVGAGDFSCGWTDRAVIANYKAGGKADGDLVSVEVQ*
Ga0070710_1009669613300005437Corn, Switchgrass And Miscanthus RhizosphereEPPLDRRKVLFLKGKLTSVNCSQSPVAILTVRSATRTLKLRTDNYKTLLLVGADEFSCAWMDRVVVVNYKAGGKADGDLVSVEVQ*
Ga0070708_10158760213300005445Corn, Switchgrass And Miscanthus RhizosphereADKEDEDSSSEQNATATEPALDRRKVLFLKGKLTSVDCHQSPAATLTVRSGVRTFKLRTENYKSLLLVGADEFSCEWMDRPVVVNYKAGGKADGDLVSVEVQ*
Ga0070679_10175117613300005530Corn RhizosphereRKVQFVRGKLLRVDCTQSPEAILTIRTGARTMRLRADNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEIQ*
Ga0066705_1077983313300005569SoilTITKEPVPDKRKVQYLRGRLMSVDCSQSPAAILTVKTGSRTIQLRTDNYKSLLMVGADEFSCDWANRPVVVNYKAGGKADGDLVSVEVQ*
Ga0068856_10196248613300005614Corn RhizosphereGGPAPASAENDEEDAHSGSAEAAPTEPVPDRRKVQFVKGKLLKVDCTHSPVAILTIRTGARTMRLRTDDYKSLLLVGADDFSCEWTDRAVIANYKAGGKADGDLVSVEVQ*
Ga0068859_10249602813300005617Switchgrass RhizospherePAEPAIDRRKVQFVRGKLTRVDCSQSPLAILTVRTSARTLKLRTADYKSLLVVGADEFSCEWTERAVIANYKAGGKNDGDLVSIEVQ*
Ga0068866_1007253733300005718Miscanthus RhizosphereRKVQFVRGKLLRVDCTQSPEAILIIRTGARTMRLRTDNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEIQ*
Ga0068861_10048905233300005719Switchgrass RhizosphereSQNGAGSPVSSTSDNDEEDANSGKAEAVPAEPVPDRRKVQFVRGKLLRVDCTQSPEAILIIRTGARTMRLRTDNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEIQ*
Ga0075023_10001485743300006041WatershedsASPNPAAVTSGDSDDAATAQTEAPPTEPTIDRRKVQFVRGKLAKVDCSQSPLAILTIRTNSRTVKLRTVDYKSLLVVGADEFSCEWTDRAVIANYKAGGKADGDLVSIEVQ*
Ga0075028_10014896323300006050WatershedsNASQTGPATSVSSVPEHDADDASSAQHEAAPAEPVPDRRKVQFVRGRLIKVDCSQNPVAILTVRTNSRTLRLRTENYKSLLLVGADEFSCDWTDRAVVANYKAGGKMDGDVVSVEVQ*
Ga0075026_10076694523300006057WatershedsSDDNTPSAPAEPELDKRKVQYLRGKLVSVDCSQSPAATLAIRAGARTVKLRTENYKSLLLVGADEFSCAWADRPIIANYKAGGKFDGDLVSVEVQ*
Ga0075017_10026977843300006059WatershedsPQESTASQPTASTNSTATVPKASAARAEEDDASTESAPAEPELDKRKVQYLRGKLISVDCSHDPVAILTVRAGSRTAKLRADNYKSLLLVGVDEFSCTWTDRPVIANYKAGGKADGDLVSLEVQ*
Ga0070715_1042254923300006163Corn, Switchgrass And Miscanthus RhizosphereTATSGDSEDDTSAQAQAPPAEPAIDRRKAQFVRGKLTRVDCSQSPLAILTVRTSARTLKLRTADYKSLLVVGADEFSCEWTERAVIANYKAGGKNDGDLVSIEVQ*
Ga0070716_10033479913300006173Corn, Switchgrass And Miscanthus RhizosphereTSPKPAPQPSAAKADEDSSSDQNSETNPAPATEPGPDKRKVVFLRGKLTSVDCSQSPGATLTVRSGARTVKLHTDNYKSLLLVGAEEFSCQWTDRPVVVNYKAGGKADGDLVSVEVQ*
Ga0075426_1101318013300006903Populus RhizosphereAGSPVSSTSDNDEEDANSGKAEAVPAEPVPDRRKVQFVRGKLLRVDCTQSPAAILTIRTGARTMRLRTDNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEIQ*
Ga0075436_10060926013300006914Populus RhizosphereEAVPAEPVPDRRKVQFVRGKLLRVDCTQSPAAILTIRTGARTMRLRTDNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEIQ*
Ga0066710_10165192333300009012Grasslands SoilPVPDKRKVQYLRGRLMSVDCSQSPAAILTVKTGSRTIQLRTDNYKSLLMVGADEFSCDWANRPVVVNYKAGGKADGDLVSVEVQ
Ga0105245_1111266713300009098Miscanthus RhizosphereDRRKVQFVRGKLLRVDCTQSPEAILTIRTGARTMRLRADNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEIQ*
Ga0105241_1084124513300009174Corn RhizosphereNGAGSPVSSTSDNDEEDANSGKAEAVPAEPVPDRRKVQFVRGKLLRVDCTQSPEAILTIRTGARTMRLRTDNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEIQ*
Ga0105248_1004082313300009177Switchgrass RhizospherePAEPVPDRRKVQFVRGKLLRVDCTQSPEAILTIRTGARTMRLRADNYKSLLLVGADEFSCEWANRGVIANYKAGGKADGDLVSVEIQ*
Ga0105237_1028191613300009545Corn RhizosphereGKLLRVDCTQSPEAILIIRTGARTMRLRTDNYKSLLLVGADDFSCEWADRGVIANYKAGGKADGDLVSLEIQ*
Ga0105237_1211397023300009545Corn RhizosphereDQSSAAPAEPALDKRKVLFLKGKLMAVDCRQSPAATLTVRAGTRTLKLHTNDYKSLLLVGADEFSCEWMDRPIVVNYKAGGKTDGDLVSVEVQ*
Ga0105237_1242412013300009545Corn RhizospherePAEPVPDRRKVQFVRGRLIKVDCSQNPGAILTVRTNSRTLRLRTDNYKSLLLVGADEFSCDWADRAVIANYKAGGKADGDLVSVEVQ*
Ga0134128_1284841523300010373Terrestrial SoilLPQDNASQNGAGSPVSSTSDNDEEDANSGKAEAVPAEPVPDRRKVQFVRGKLLRVDCTQSPAAILTIRTGARTMRLRTDNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEIQ*
Ga0134124_1035907133300010397Terrestrial SoilASDKTAARPPETVTSGDSEDDTSQAQAPLAEPAIDRRKVQFVRGKLTRVDCSQSPLAILTVRTSARTLKLRTADYKSLLVVGADEFSCEWTERAVIANYKAGGKNDGDLVSIEVQ*
Ga0137389_1015851413300012096Vadose Zone SoilPPATKPKAQPPISADKEDEESSSEQNATATEPALDRRKVLFLKGKLTSVDCSQSPAATLTVRSGTRTFRLRTDNYKSLLLVGADDFSCEWMDRPVVVNYKAGGKADGDLVSVEVQ*
Ga0137359_1004329153300012923Vadose Zone SoilAATNPKPVPESSAGKGDEDSSSDQTAPTATEPVPDRRKVQFLRGKLTSVDCSQSPTAILTVRSGARTFKLRTDNYKSLLMVGADEFSCEWTDRPVVVNYKAGGKADGDLVSVEVQ*
Ga0137413_1080233913300012924Vadose Zone SoilQSEAPPSEPVQDRRKVQFVRGRLVKVDCSQNPGATLTVRTNSRTLRLRTDNYKSLLLVGADDFSCDWTDRAVIANYKAGGKADGDLVSVEVQ*
Ga0164298_1133207113300012955SoilRKVLFLKGKLMAVDCRQSPAATLTVKAGSRTLKLHTDDYKSLLMVGAEEFSCEWMDRPIVVNYKAGGKTDGDLVSVEVQ*
Ga0164302_1106896023300012961SoilVRVKLLRGDCTQSPEAILTIRTGARTMRLRADNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEVQ*
Ga0164302_1120585223300012961SoilAAPANTTPADEDSDSDQSAAAPAEPALDKRKVLFLKGKLMAVDCRQSPAATLTVKAGSRTLKLHTDDYKSLLLVGADEFSCEWMDRPIVVNYKAGGKTDGDLVSVEVQ*
Ga0164308_1100749713300012985SoilPAEPVPDRRKVQFVRGKLLRVDCTQSPEAILIIRTGARTMRLRTDNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEVQ*
Ga0163163_1018535313300014325Switchgrass RhizosphereIDRRKAQFVRGKLTRVDCSQSPLAILTVRTSARTLKLRTADYKSLLVVGADEFSCEWTERAVIANYKAGGKNDGDLVSIEVQ*
Ga0157376_1014530513300014969Miscanthus RhizosphereRKVQFVRGKLTRVDCSQSPLAILTVRTSARTLKLRTADYKSLLVVGADEFSCEWTERAVIANYKAGGKNDGDLVSIEVQ*
Ga0157376_1208844113300014969Miscanthus RhizosphereRRKVQFVRGRLIKVDCSQNPGAILTVRTNSRTLRLRTDNYKSLLLVGADEFSCDWVDRAVIANYKAGGKADGDLVSVEVQ*
Ga0157376_1213883213300014969Miscanthus RhizosphereRKVQFVRGKLTRVDCSQSPLAILTVRTSARTLKLRTADYKSLLVVGADEFSCEWTDRAVIANYKAGGKNDGDLVSIEVQ*
Ga0137403_1138776513300015264Vadose Zone SoilGNSDSKVDEDSGSDQDAAAATEPAPDKRKVLFLKGTLASVKCGDGSTATLIVRSGAKTLRLRTDNYKSLLLVGADEFSCEWTGRPVVVNYKAGGKADGDLVSLEVQ*
Ga0132255_10054322113300015374Arabidopsis RhizosphereATEPVPDRRKVLFLKGRLTTVDCRQSPAATLTVRAGTRTLKLRTDNYKALLLVGADEFSCEWVDRPVVVNYKAGGKTDGDLVSVEVQ*
Ga0132255_10091992513300015374Arabidopsis RhizosphereDEEDANSGKAEAVPAEPVPDRRKVQFVRGKLLRVDCTQSPEAILTIRTGARTMRLRADNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEIQ*
Ga0163161_1040776323300017792Switchgrass RhizosphereGSPVSSTSDNDEEDANSGKAEAVPAEPVPDRRKVQFVRGKLLRVDCTQSPEAILIIRTGARTMRLRTDNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEIQ
Ga0187823_1000417513300017993Freshwater SedimentADQAPAPAEPQIDKRKVQYLRGKLVRVDCSQAPAAVLTVRTASRTMKLRTENYKSLLLVGADEFSCEWTDRPVVVNYKAGGKSDGDLVTVEVQ
Ga0137408_105511553300019789Vadose Zone SoilASTPTPPASAASGAPRTLNEPDGEDGSSPSEATSAEPVPDRRKSQYVRGKLVKVDCSQSPVAILTVKTNSRTLRLRAEDYKSLLLVGADEFSCEWNDRAVIANYKAGGKADGDLVSVEVQ
Ga0193723_109168223300019879SoilAGQTEPAPAEPVPDRRKVQFVRGRLIKVDCAQNAGAILTVRTNSRTLKLRTDNYKSLLLVGADEFSCGWTDRAVVANYKAGGKADGDLVSVEVQ
Ga0193724_102118743300020062SoilAPANTTPADEDSDSDQSAAAPAEPALDKRKVLFLKGKLMAVDCRQSPAATLTVKAGSRTLKLHTDDYKSLLLVGADEFSCEWMDRPIVVNYKAGGKTDGDLVSAEVQ
Ga0210406_1048136013300021168SoilSSAQNEAVPSEPVPDRRKVQFVRGKLMKVDCSQGPAAILTVRTSSRTMRLRTDNYKSLLLVGADEFSCDWTDRAVVANYKAGGKADGDLVSVEVQ
Ga0210408_1059014333300021178SoilNTPSAPAEPELDKRKVQYLRGKLVSVDCSQSPAATLAIRAGARTVKLRTENYKSLLLVGADEFSCAWADRPIIANYKAGGKSDGDLVSVEVQ
Ga0210396_1081241813300021180SoilNPAQTAPRTATDSDADDASAAQNEAVPSEPVPDRRKVQFVRGKLTKVDCSQAPAAILTVRTNSRTMRLRTDNYKSLLLVGADEFSCDWTDRAVVANYKAGGKADGDLVSVEVQ
Ga0210410_1012625743300021479SoilTAAVSSVPEHDADDASSAQSDAAPAEPVPDRRKVQFVRGRLIKVDCTQNPGAILTVRTNSRTLKLRTDNYKLLLLVGADEFSCDWTDRAVVANYKAGGKADGDLVSVEVQ
Ga0207707_1117733813300025912Corn RhizosphereTEPVPDRRKIQFVRGKLLKVDCTHSPVAILTIRTGARTMRLRTDDYKSLLLVGAGDFSCGWTDRAVIANYKAGGKADGDLVSVEVQ
Ga0207671_1143524713300025914Corn RhizosphereAASPPETATSGDSEDDTSAQAQAPPAEPAIDRRKVQFVRGKLTRVDCSQSPLAILTVRTSARTLKLRTADYKSLLVVGADEFSCEWTERAVIANYKAGGKNDGDLVSIEVQ
Ga0207663_1111667513300025916Corn, Switchgrass And Miscanthus RhizosphereAPPAEPAIDRRKAQFVRGKLTRVDCSQSPLAILTVRTSARTLKLRTADYKSLLVVGADEFSCEWTERAVIANYKAGGKNDGDLVSIEVQ
Ga0207649_1158581923300025920Corn RhizosphereNDEEDANSGKAEAVPAEPVPDRRKVQFVRGKLLRVDCTQSPAAILTIRTGARTMRLRTDNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEIQ
Ga0207681_1008471713300025923Switchgrass RhizosphereNASQNGAGSPVSSTSDNDEEDANSGKAEAVPAEPVPDRRKVQFVRGKLLRVDCTQSPEAILIIRTGARTMRLRTDNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEIQ
Ga0207650_1101880823300025925Switchgrass RhizosphereAVPAEPVPDRRKVQFVRGKLLRVDCTQSPEAILTIRTGARTMRLRADNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEIQ
Ga0207704_1063327013300025938Miscanthus RhizosphereVLPQDNASQNGAGSPVSSTSDNDEEDANSGKAEAVPAEPVPDRRKVQFVRGKLLRVDCTQSPEAILIIRTGARTMRLRTDNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEIQ
Ga0207665_1034213013300025939Corn, Switchgrass And Miscanthus RhizospherePVDAETATSGDSEDDTSAQAQAPPAEPAIDRRKAQFVRGKLTRVDCSQSPLAILTVRTSARTLKLRTADYKSLLVVGADEFSCEWTERAVIANYKAGGKNDGDLVSIEVQ
Ga0207661_1007299313300025944Corn RhizosphereQNGAGSPVSSTSDNDEEDANSGKAEAVPAEPVPDRRKVQFVRGKLLRVDCTQSPEAILTIRTGARTMRLRADNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEIQ
Ga0207640_1000741953300025981Corn RhizosphereGVLPQDNASQNGAGSPVSSTSDNDEEDANSGKAEAVPAEPVPDRRKVQFVRGKLLRVDCTQSPEAILTIRTGARTMRLRADNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEIQ
Ga0207658_1025058613300025986Switchgrass RhizosphereDANSGKAEAVPAEPVPDRRKVQFVRGKLLRVDCTQSPEAILIIRTGARTMRLRTDNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEIQ
Ga0207702_1000721083300026078Corn RhizosphereVLPQDNASQNGAGSPVSSTSDNDEEDANSGKAEAVPAEPVPDRRKVQFVRGKLLRVDCTQSPEAILTIRTGARTMRLRADNYKSLLLVGADEFSCEWADRGVIANYKAGGKADGDLVSLEIQ
Ga0209153_112948623300026312SoilPADMGEKSSSDQNETITKEPVPDKRKVQYLRGRLMSVDCSQSPAAILTVKTGSRTIQLRTDNYKSLLMVGADEFSCDWANRPVVVNYKAGGKADGDLVSVEVQ
Ga0257172_106229813300026482SoilEPVPDRRKVQFVRGRLIKVDCTQNAGAILTVRTNSRTLKLRTDNYKSLLLVGADEFSCGWTDRAVVANYKAGGKADGDLVSVEVQ
Ga0209807_118834713300026530SoilSDQNETITKEPVPDKRKVQYLRGRLMSVDCSQSPAAILTVKTGSRTIQLRTDNYKSLLMVGADEFSCDWANRPVVVNYKAGGKADGDLVSVEVQ
Ga0179587_1053956733300026557Vadose Zone SoilKAQPSSSSSTAEDNSSSDQNGENAAPAEPAPDKRKVLFLKGRLASVDCSKSPVATVTVRSGARTLKLRTENYKSLLLVGADEFSCDWTARPVVVNYKSGGKADGDLVSMEVQ
Ga0209734_102708823300027535Forest SoilDASSAQNEAVPSEPVPDRRKVQFVRGKLMKVDCSQNPAAILTVRTSSRTMRLRTDDYKSLLLVGADEFSCDWTDRAVVANYKAGGKADGDLVSVEVQ
Ga0209219_104589313300027565Forest SoilSASPQAPPATKPRIPPQSSSGKEDEESSSDQNAATEPVPDKRKAQFLRGKLASVDCSQSPSATLTVRSGARTFKLRTDNYKSLLMVGADEFSCEWRDRPVVVNYKAGGKADGDLVSLEVQ
Ga0209528_106874613300027610Forest SoilAQNEAVPSEPVPDRRKVQFVRGKLMKVDCSQNPAAILTVRTSSRTMRLRTDDYKSLLLVGADEFSCDWTDRAVVANYKAGGKADGDLVSVEVQ
Ga0209328_1013750113300027727Forest SoilGPANPAQTAPRTATDSDADDASSAQNEAVPSEPVPDRRKVQFVRGKLMKVDCSQGPAAILTVRTSSRTMRLRTDDYKSLLLVGADEFSCDWTDRAVVANYKAGGKADGDLVSVEVQ
Ga0209180_1010417813300027846Vadose Zone SoilPVVYQNAGEASESDQAAAAPAEPAVDNRKVQFLKGKLVTVDCSHGPAATLTVRAGARTMKLRTDDYKSLLMVGDEFSCEWKDRSVVVNFKAGGKADGDLVSVEVQ
Ga0209283_1082666423300027875Vadose Zone SoilYQNAGEASESDQAAAAPAEPAVDNRKVQFLKGKLVTVDCSHGPAATLTVRAGARTMKLRTDDYKSLLMVGDEFSCEWKDRSVVVNFKAGGKADGDLVSVEVQ
Ga0209068_1033216713300027894WatershedsPQASASSQPPRTASTLAAKTVPQSAAKDAGENADSDQTEAAPAEPAADRRKVQFLKGRLLSVDCSQGPVATLTVRTGARTMKLRTDNYKSLLMVGTDEFSCEWKDRPVVVNYKAGGKADGDLVSVEVQ
Ga0209583_1001740243300027910WatershedsASPNPAAVTSGDSDDAATAQTEAPPTEPTIDRRKVQFVRGKLAKVDCSQSPLAILTIRTNSRTVKLRTVDYKSLLVVGADEFSCEWTDRAVIANYKAGGKADGDLVSIEVQ
Ga0209583_1006230213300027910WatershedsAKTVPQSAAKDAGENADSDQTEAAPAEPAADRRKVQFLKGRLLSVDCSQGPVATLTVRAGARTMKLRTDNYKSLLMVGTDEFSCEWKDRPVVVNYKAGGKADGDLVSVEVQ
Ga0257175_100393733300028673SoilPQAPPATKPKAQPPISADKEDEESSSEQNATATEPALDRRKVLFLKGKLTSVDCSQSPAATLTVRSGTRTFRLRIDNYKSLLLVGADDFSCEWMDRPVVVNYKAGGKADGDLVSVEVQ
Ga0257175_103176333300028673SoilEPVPDRRKVQFVRGKLMKVDCSQDPAAILTVRTNSRTMRLRTDNYKSLLLVGADEFSCDWTDRAVVANYKAGGKADGDLVSVEVQ
Ga0257175_105729413300028673SoilSDQAAAAPAEPAVDNRKVQFLKGKLVTVDCSHGPAATLTVRAGARTMKLRTDDYKSLLMVGDEFSCEWKDRSVVVNFKAGGKADGDLVSVEVQ
Ga0307312_1005381053300028828SoilAAATEPIPDRRKVLFLKGKLINVDCRQSPAAILTIRSGTRTFRLRTDNYKSLLLVGADEFSCEWMERPVVANYKAGGKADGDLVSVEVQ
(restricted) Ga0255310_1008992213300031197Sandy SoilKAQFVRGKLLKVDCSQPPSAILSVRTNSRIMRLRTDDYKALLLVGADEFSCEWTDRGVVANYKAGGKADGDLVSVEVQ
Ga0170824_11684564723300031231Forest SoilLPQDKEASQAPVAPTPAKAQPSRPSSTAEDNSSSDQNAENAAPAEPAPDKRKVLFLKGRLASVDCSKSPVAIVIVRSGARTLKLRTENYKSLLLVGADEFSCDWTARPVVVNYKSGGKADGDLVSMEVQ
Ga0170824_12169583313300031231Forest SoilTAAPADEDSDSDQSSAAPAEPALDKRKVLFLKGKLMTVDCRQSPAATLTVKAGTRTLKLHTDDYKSLLMVGADEFSCEWTDRPIVVNYKAGGKTDGDLVSVEVQ
Ga0170820_1529165213300031446Forest SoilDEDSDSDQSSAAPAEPALDKRKVLFLKGKLMTVDCRQSPAATLTVKAGTRTLKLHTDDYKSLLMVGADEFSCEWTDRPIVVNYKAGGKTDGDLVSVEVQ
Ga0170818_10667471113300031474Forest SoilASQTGPAVSSVPEHDEDPSSAQSEARPAEPVPDRRKSQFVRGKLIKVDCSQNPGAILTVRTSSRTLRLRTDNYKSLLLVGADEFSCDWTDRAIIANYKVGGKADGDLVSVEVQ
Ga0307473_1060586223300031820Hardwood Forest SoilQSEPAPAEPVPDRRKVQFVRGRLIKVDCTQNAGAILTVRTNSRTLKLRTDNYKSLLLVGADEFSCGWTDRAVVANYKAGGKGDGDLVSVEVQ
Ga0307471_10330726013300032180Hardwood Forest SoilEHDADDASSAQSDAAPAEPVPDRRKVQFVRGRLIKVDCTQNPGAILTVRTNSRTLKLRTDNYKLLLLVGADEFSCDWTDRAVVANYKAGGKADGDLVSVEVQ
Ga0335080_1015861013300032828SoilDSDDESATTHAEPPPDRRKVQFLKGRLIAVNCSQPPVAVLTVTSASRRLKLRTDDYKSLLLIGADEFSCDWRDRTVIANYKAGGKADGDLVSLEVQ
Ga0335080_1203911713300032828SoilPQDSTSQAVSSAPPPATENDEEDANSGKTSAPAEPAPDRRKVQFVRGKLLKVDCTGSPVAILIIRTGARTLRLRTDDYKSLLLVGADEFSCAWADQGVIANYKAGGKADGDLVSVEIQ
Ga0335081_1212817223300032892SoilPPPDRRKVQFVKGKLISVSCAQAPAAVVTVAGAGKTLRLRTDDFKSLLLIGADEFSCDWRNRSVVANYKAGGKADGDLVSLEVD
Ga0335076_1017370313300032955SoilAANNATPPSSSAADSDDESATTHAEPPPDRRKVQFLKGRLIAVNCSQPPVAVLTVTSASRRLKLRTDDYKSLLLIGADEFSCDWRDRTVIANYKAGGKADGDLVSLEVQ
Ga0370501_0201293_1_3333300034195Untreated Peat SoilAAAVSSVPEHDADDASAAPGEAAPVEPVPDRRKVQFVRGRLIKVDCSQNPDAILTVRTNSRMLKLRTDNYKSLLLVGADEFSCDWTDRAVIANYKAGGKADGDLVSIEVQ

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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