NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F105996

Metagenome / Metatranscriptome Family F105996

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F105996
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 73 residues
Representative Sequence MTWTQTLRERWWLAPIAILVVAAAIVIRIITTPLEVNANVNDGDQAVPRTATIDLHFNQDMKADSVQ
Number of Associated Samples 83
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 97.00 %
% of genes from short scaffolds (< 2000 bps) 85.00 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(34.000 % of family members)
Environment Ontology (ENVO) Unclassified
(56.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(74.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 40.30%    β-sheet: 0.00%    Coil/Unstructured: 59.70%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF11258DUF3048 66.00
PF13205Big_5 7.00
PF13411MerR_1 4.00
PF00982Glyco_transf_20 3.00
PF00704Glyco_hydro_18 1.00
PF01074Glyco_hydro_38N 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0380Trehalose-6-phosphate synthase, GT20 familyCarbohydrate transport and metabolism [G] 3.00
COG0383Alpha-mannosidaseCarbohydrate transport and metabolism [G] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001545|JGI12630J15595_10112632All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium536Open in IMG/M
3300001661|JGI12053J15887_10549083All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium550Open in IMG/M
3300001664|P5cmW16_1059394All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium652Open in IMG/M
3300002561|JGI25384J37096_10085238All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1134Open in IMG/M
3300002561|JGI25384J37096_10204467All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium580Open in IMG/M
3300002915|JGI25387J43893_1014234All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1093Open in IMG/M
3300002915|JGI25387J43893_1043812All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium618Open in IMG/M
3300002915|JGI25387J43893_1058646All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium557Open in IMG/M
3300005166|Ga0066674_10104968All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1314Open in IMG/M
3300005176|Ga0066679_10250287All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1141Open in IMG/M
3300005177|Ga0066690_10339079All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1018Open in IMG/M
3300005179|Ga0066684_10106874All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1723Open in IMG/M
3300005467|Ga0070706_100030496All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4970Open in IMG/M
3300005467|Ga0070706_100052326All Organisms → cellular organisms → Bacteria3769Open in IMG/M
3300005518|Ga0070699_100188457All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1832Open in IMG/M
3300005536|Ga0070697_101443873All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium614Open in IMG/M
3300005555|Ga0066692_10815866All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium573Open in IMG/M
3300005559|Ga0066700_10259218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1217Open in IMG/M
3300005559|Ga0066700_10759358All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium658Open in IMG/M
3300005574|Ga0066694_10130223All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1187Open in IMG/M
3300005575|Ga0066702_10021539All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium3156Open in IMG/M
3300005575|Ga0066702_10022655All Organisms → cellular organisms → Bacteria3095Open in IMG/M
3300006031|Ga0066651_10351895All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300006057|Ga0075026_100710883All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium601Open in IMG/M
3300006163|Ga0070715_10270174All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium897Open in IMG/M
3300006797|Ga0066659_10145515All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1678Open in IMG/M
3300006800|Ga0066660_11462579All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium537Open in IMG/M
3300007265|Ga0099794_10729481All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium529Open in IMG/M
3300009012|Ga0066710_100698319All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1547Open in IMG/M
3300009090|Ga0099827_10087651All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2447Open in IMG/M
3300010141|Ga0127499_1248731All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium532Open in IMG/M
3300010322|Ga0134084_10235087All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium655Open in IMG/M
3300011271|Ga0137393_10866978All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium771Open in IMG/M
3300012180|Ga0153974_1140126All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium564Open in IMG/M
3300012189|Ga0137388_10230529All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1680Open in IMG/M
3300012208|Ga0137376_10154922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1972Open in IMG/M
3300012208|Ga0137376_10221007All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1641Open in IMG/M
3300012209|Ga0137379_11030980All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium728Open in IMG/M
3300012209|Ga0137379_11414105All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium599Open in IMG/M
3300012356|Ga0137371_11410662All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium510Open in IMG/M
3300012357|Ga0137384_10963445All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium686Open in IMG/M
3300012361|Ga0137360_10460746All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1078Open in IMG/M
3300012397|Ga0134056_1305881All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium618Open in IMG/M
3300012405|Ga0134041_1177443All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium761Open in IMG/M
3300012405|Ga0134041_1185998All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium526Open in IMG/M
3300012927|Ga0137416_10914068All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium781Open in IMG/M
3300012975|Ga0134110_10184026All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium872Open in IMG/M
3300013770|Ga0120123_1160615All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium536Open in IMG/M
3300014157|Ga0134078_10130220All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium972Open in IMG/M
3300014166|Ga0134079_10126499All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1006Open in IMG/M
3300017654|Ga0134069_1175553All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium724Open in IMG/M
3300018468|Ga0066662_11057525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium808Open in IMG/M
3300018482|Ga0066669_10263851All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1371Open in IMG/M
3300021479|Ga0210410_10690642All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium902Open in IMG/M
3300021559|Ga0210409_10267134All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1547Open in IMG/M
3300025910|Ga0207684_10000846All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium35295Open in IMG/M
3300025910|Ga0207684_10018454All Organisms → cellular organisms → Bacteria5973Open in IMG/M
3300025939|Ga0207665_10034272All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi3369Open in IMG/M
3300026296|Ga0209235_1186917All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium755Open in IMG/M
3300026298|Ga0209236_1298240All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium521Open in IMG/M
3300026308|Ga0209265_1162917All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium580Open in IMG/M
3300026309|Ga0209055_1183489All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium646Open in IMG/M
3300026310|Ga0209239_1068079All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1561Open in IMG/M
3300026313|Ga0209761_1064797All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1969Open in IMG/M
3300026313|Ga0209761_1089306All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1571Open in IMG/M
3300026317|Ga0209154_1061329All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1654Open in IMG/M
3300026325|Ga0209152_10080075All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1200Open in IMG/M
3300026327|Ga0209266_1050079All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2061Open in IMG/M
3300026332|Ga0209803_1282695All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium569Open in IMG/M
3300026335|Ga0209804_1044856All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2181Open in IMG/M
3300026523|Ga0209808_1038955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2238Open in IMG/M
3300026527|Ga0209059_1079288All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1394Open in IMG/M
3300026527|Ga0209059_1240909All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium607Open in IMG/M
3300026528|Ga0209378_1251856All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium561Open in IMG/M
3300026529|Ga0209806_1214725All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium660Open in IMG/M
3300026530|Ga0209807_1283269All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium560Open in IMG/M
3300026530|Ga0209807_1301882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium542Open in IMG/M
3300026536|Ga0209058_1031783All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi3245Open in IMG/M
3300026536|Ga0209058_1234466All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium667Open in IMG/M
3300026538|Ga0209056_10021630All Organisms → cellular organisms → Bacteria6262Open in IMG/M
3300026538|Ga0209056_10582412All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium566Open in IMG/M
3300026880|Ga0209623_1003507All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium879Open in IMG/M
3300027546|Ga0208984_1005598All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2261Open in IMG/M
3300027562|Ga0209735_1013124All Organisms → cellular organisms → Bacteria1630Open in IMG/M
3300027583|Ga0209527_1047266All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium969Open in IMG/M
3300027635|Ga0209625_1011640All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1914Open in IMG/M
3300027651|Ga0209217_1106973All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium796Open in IMG/M
3300027674|Ga0209118_1180215All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium576Open in IMG/M
3300027678|Ga0209011_1060316All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1144Open in IMG/M
3300027681|Ga0208991_1143456All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium707Open in IMG/M
3300027684|Ga0209626_1091050All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium786Open in IMG/M
3300027727|Ga0209328_10158186All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium688Open in IMG/M
3300027748|Ga0209689_1097504All Organisms → cellular organisms → Bacteria1524Open in IMG/M
3300027748|Ga0209689_1211248All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium839Open in IMG/M
3300027748|Ga0209689_1397534All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium527Open in IMG/M
3300027903|Ga0209488_10387682All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1035Open in IMG/M
3300027910|Ga0209583_10468403All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium615Open in IMG/M
3300029636|Ga0222749_10479476All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium670Open in IMG/M
3300031753|Ga0307477_10031855All Organisms → cellular organisms → Bacteria3610Open in IMG/M
3300032205|Ga0307472_100349402All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1213Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil34.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil13.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil13.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil13.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil9.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.00%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.00%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost2.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.00%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300001664Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembledEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002915Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cmEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300010141Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012180Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaGHost-AssociatedOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012397Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012405Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300013770Permafrost microbial communities from Nunavut, Canada - A15_5cm_18MEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026880Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027546Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027562Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027583Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027635Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027678Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027681Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027684Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027727Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12630J15595_1011263223300001545Forest SoilMTWTQTLRERWWLAPIAILVVAAAIVIRIITTPLEVSANVNDGDQAVPRTATIDLHFNQDMK
JGI12053J15887_1054908313300001661Forest SoilMTWTKTLRERWWLAPIAILVVAAAIVIRIITTPLEVSANVNDGDQSVPRTATIDLHF
P5cmW16_105939423300001664PermafrostMTWRQTLRERWWLAPIAIALVAAVVIIRILTTPLEVSANVSDGDQTVPRTASIDLRFSQDMSGDSVQRSFTISPKVMVAFK
JGI25384J37096_1008523823300002561Grasslands SoilMTWTQTLRQRWWLLPIAVLVVGAAIVIRIITTPLEVSANVNDGDQAVPRTATIDLHFNQEMKPASVEKAFTITPSVAVS
JGI25384J37096_1020446723300002561Grasslands SoilMTWTQTLRERWWLAPIAILVVAAAIIIRIITTPLEVNANVSDGDQAVPRTATIDLRFNQDMKADSVQHAFSISPAVLVG
JGI25387J43893_101423423300002915Grasslands SoilMTWTQTLRQRWWLLPIAILAVAAAIVIRIITTPLEVSANVNNGDQAVPRTATIDLHFNQEMKPASVEKAFSITPSVPRSR*
JGI25387J43893_104381213300002915Grasslands SoilMTWTQTLRERWWLAPIAILXVAAAIIIRXITTPLEVNANVNDGDQSVPRTATIXLRFNQDMKADSVQHAFSISPAVLVGFKAVSARE
JGI25387J43893_105864613300002915Grasslands SoilMTLTQRLRERWWLAPIAILVVAAAIAIRILTTPLEVNANVNDGDQAVPRTATIDLHFNQNMKPDSVQHAFSMTPA
Ga0066674_1010496813300005166SoilMTWTQTLRERWWLAPIAILLVVAAIIIRIITTPLEVNANVNDGDQAVPRTATIDLRFN
Ga0066679_1025028713300005176SoilMTWTQTLRERWWLAPIAILVVAAAIVIRIITTPLEVSANVSDGDQAVPRTATIDLHFNQDMKPDSVQHAFTISP
Ga0066690_1033907913300005177SoilMTWTQTLRERWWLAPIAILVVAAAIVIRIITTPLEVSANVSNGDQAVPRTATIDLRFNQDMKADSVQHAFTISPAVLVGFKAVTP
Ga0066684_1010687413300005179SoilMTWTHTLRQRWWLLPIAILAVAAAIVIRIITTPLEVSANVNNGDQAVPRTATIDL
Ga0070706_10003049613300005467Corn, Switchgrass And Miscanthus RhizosphereMTWTQTLRERWWLAPIAIVVVAAAIVIRIITTPLEVSANVSDGDQAVPRTATIDLHFNQ
Ga0070706_10005232613300005467Corn, Switchgrass And Miscanthus RhizosphereMTWTQTLRERWWLAPIAIALVAAAIVIRIITTPLEVSANVSDGDQAVPRTATIDLHFNQ
Ga0070699_10018845713300005518Corn, Switchgrass And Miscanthus RhizosphereMTWTQTLRERWWLAPIAILAVAAAIIIRIITTPLEVSANVSDGDRSVPRTATIDLRFNQDMKADSV
Ga0070697_10144387323300005536Corn, Switchgrass And Miscanthus RhizosphereMTWTQTLRERWWLAPIAILVVAAAIVIRIITTPLEVNANVNDGDQAVPRTATIDLHFNQDMKADSVQHAFSINPGVMVAFK
Ga0066692_1081586623300005555SoilMSMQQTLRQRWWLAPLAIGLVAAAVIIKIITTPLEVSASVSDGDQAVPRNAAIDLKFNQDMKPDTVRSAFAISPNVPVAF
Ga0066700_1025921813300005559SoilMTWTQTLRQRWWLLPIAILVVAAAIVIRIITTPLEVSANVNDGDQAVPRTATIDLHFNQ
Ga0066700_1075935823300005559SoilMTWMQTLRQRWWLAPIAILLVAAAIVIRIITTPLEVNANVNDGDQAVPRTATIDLRFNQDMKADSVQQAFSISPAVLVGFK
Ga0066694_1013022323300005574SoilMTWTQTLRERWWLAPIAILLVAAAIIIRIITTPLEVNANVNDGDQSVPRTATIDLRFNQDMKAD
Ga0066702_1002153923300005575SoilMTWTQTLRERWWLAPIAVLVVLAAIVIRIITTPLEVNANVSDGDQAVPRTAAIDLRFNQDMKPDSV*
Ga0066702_1002265513300005575SoilMSMQQTLRQRWWLAPLAIGLVAAAVIIKIITTPLEVSASVSDGDQAVPRNAAIDLKFNQDMKPDTVRSAFAISPNVPVAFK
Ga0066651_1035189513300006031SoilMTWTQTLRQRWWLLPIAVLVVAAAIVIRIITTPLEVSANVNNGDQAVPRTATIDLHFNQEMK
Ga0075026_10071088313300006057WatershedsMTWTQTLRQRWWLAPIAIAVVAAAIVIRIITTPLEVSANVSDGDQAVPRTATIDLHFNQDMK
Ga0070715_1027017423300006163Corn, Switchgrass And Miscanthus RhizosphereMTWTQTLRERWWLAPIAILVVAAAIVIRIITTPLEVNANVNDGDQAVPRTATIDLHFNQEMK
Ga0066659_1014551523300006797SoilMTWTQTLRERWWLAPIAILAVAAAIVIRIITTPLEVSANVTDGERSVPRTATIDLRFNQDMKPDSVQHAFTISPAVLVGFKTVSPRDFQFR
Ga0066660_1146257913300006800SoilMTWTQTLRERWWLAPIAILVVAAAIVIRIITTPLEVSANVSDGDQAVPRTATIDLHFNQDMKA
Ga0099794_1072948123300007265Vadose Zone SoilMTWTQTLRQRWWLLPIAVLVVGAAIVIRIITTPLEVSANVNDGDQAVPRTATIDLHFNQEMKPASVEKAFTITPSVAVSFKAVSPKEFQFR
Ga0066710_10069831913300009012Grasslands SoilMTWTQTLRERWWLAPIAILLVAAAIIIRIITTPLEVNANVNDGDQSVPRTATIDLRFNQDMKADSVQHAFSISPAVLVGFKAVSAR
Ga0099827_1008765143300009090Vadose Zone SoilMTWTQTLRQRWWLLPIAILVVAAAIVIRIITTPLEVSANVNDGDQAVARTAT
Ga0127499_124873123300010141Grasslands SoilMTWTQTLRERWWLAPIAILLVVAAIIIRIITTPLEVNANVNDGDQAVPRTATIDLRFNQDMKADSVQHAFSISPAVLVGFKAVSAK
Ga0134084_1023508723300010322Grasslands SoilMTWTQTLRQRWWLLPIAILVVAAAIVIRIITTPLEVSANVNNGDQAVPRTATIDLHFNQEMKPASVQRA
Ga0137393_1086697823300011271Vadose Zone SoilMTWTQTLRERWWLAPIAIFLVAAAIVIRIITTPLEVNANVNDGDQAGPRTATSDLHFNQDMKAGAVQHAFSMTPSVMVAFKAVGP
Ga0153974_114012613300012180Attine Ant Fungus GardensMTWTQTLRERWWLAPLAILAVAAVIIIRIITTPLEVSANVSDGDRSVPRTATIDLRFNQDMKAD
Ga0137388_1023052923300012189Vadose Zone SoilMTWTQTLRERWWLAPIAIAVVAAVIVIRIITTPLEVSANVSDGDQAVPRTATID
Ga0137376_1015492223300012208Vadose Zone SoilMTWTQTLRERWWLAPIAILLVAAAIIIRIITTPLEVNANVNDGDQSVPRTATIDLRF
Ga0137376_1022100713300012208Vadose Zone SoilMTWTQRLRERWWLAPIAILVVAAAIAIRIITTPLEVNANVNDGDQAVPRTATIDLHFNQDMKPDSVQHAFSMTPPV
Ga0137379_1103098033300012209Vadose Zone SoilMTWTQTLRERWWLAPIALLLVAAAIIIRIITTPLEVNANVNDGDQAVPRTATIDLRFNQDMKADSVQHAFSITP
Ga0137379_1141410523300012209Vadose Zone SoilMTWTQTLRQRWWLLPIAILVVAAAIVIRIITTPLEVSANVNDGDQAVPRTATIDLRFNQEMKAASVQHAFNITPSVPFAFKAV
Ga0137371_1141066223300012356Vadose Zone SoilMTWTQTLRERWWLAPIAILVVAAAIIIRIITTPLEVNANVNDGDQSVPRTATIDLRFNQDMKADSVQHAFSISP
Ga0137384_1096344513300012357Vadose Zone SoilMTWTQTLRERWWLAPIAILVVAAAIVIRILTTPLEVSANVSDGDQAVPRTATI
Ga0137360_1046074623300012361Vadose Zone SoilMTWTQTLRQRWWLLPIAILVVAAAIVIRIITTPLEVSANVNDGDQAVPRTATIDLHFNQEMKPASVEKAFTITPSVAVSFKAVSPK
Ga0134056_130588113300012397Grasslands SoilMTWTQTLRERWWLAPIAILLVAAAIIIRIITTPLEVNANVNDGDQAVPRTATIDLRFNQDMKADSVQHAFSISPAVLVGFKAVSAREYQFQPKMAPNTS
Ga0134041_117744323300012405Grasslands SoilMTWTQTLRQRWWLLPIAVLVVAAAIVIRIITTPLEVSANVNNGDQAVPRTATI
Ga0134041_118599823300012405Grasslands SoilMTWTQTLRERWWLAPIAILLVAAAIIIRIITTPLEVNANVNDGDQAVPRTATIDLRFNQDMKANSVQQAFSISPAVLVGFKTVSAREFQFRPKM
Ga0137416_1091406813300012927Vadose Zone SoilMTLTQTLRQRWWVLPIAILMVATAIVIRIITTPLEVSANVNDGDHAVPRTATIDLHFNQEMKAGS
Ga0134110_1018402613300012975Grasslands SoilMTWTQTLRERWWLAPIAILLVAAAIIIRIITTPLEVNANVNDGDQAVPRTATIDLRFNQD
Ga0120123_116061523300013770PermafrostMTWRQTLRERWWLAPIAVALVAAAIIIRIVTSPLEVSASVSDGDQAVPRTASIDLRFNQDMNRDSVEQSFVISPKVIVAFKAISVR
Ga0134078_1013022013300014157Grasslands SoilMTWTQTLRERWWLAPIAILLVAAAIIIRIITTPLEVNANVNDGDQAVPRTATIDLRFNQDMKADSVQHAFSISPAVLVGFKAVSAREYQFQPKMAPNTSYHV
Ga0134079_1012649923300014166Grasslands SoilMTWTQTLRERWWLAPIAILLVAAAIIIRIITTPLEVNANVNDGDQSVPRTATIDLRFNQDMKADSVQHAFSISPAVLVGFKAVSAREFQFRPKM
Ga0134069_117555313300017654Grasslands SoilMTWTQTLRERWWLAPIAILVVAAAIIIRIITTPLEVNANVNDGDQSVPRTATIDLRFNQDMKADSVQHAFSISPAVLVGFKAVSAREFQFRPKMAPSTPYNVSI
Ga0066662_1105752523300018468Grasslands SoilMTWTQTLRERWWLAPIAILAVAAAIVIRIITTPLEVSANVTDGERPVPRTATIDARFN
Ga0066669_1026385123300018482Grasslands SoilMTWTQTLRERWWLAPIAILLVAAAIIIRIITTPLEVNANVNDGDQSVPRTATIDLRFNQDMKADSVQHAFSISPAVLVGFKAVSAREFQFRPKMT
Ga0210410_1069064223300021479SoilMTWTQTLRERWWLAPIAILVVAAAIVIRIITTPLEVNANVNDGDQAVPRTATIDLHFNQDMKADSVQ
Ga0210409_1026713413300021559SoilMTWTQTLRARWWLAPIAIAVVAAAIVIRIITTPLEVSANVSAGDQAVPRTATIDLHFNQDMKPDSVQRAFTMSPSVLVAFKAVSPREFQFRPKM
Ga0207684_10000846403300025910Corn, Switchgrass And Miscanthus RhizosphereMTWTQTLRERWWLAPIAIALVAAAIVIRIITTPLEVSANVSDGDQAVPRTATIDLHFNQD
Ga0207684_1001845413300025910Corn, Switchgrass And Miscanthus RhizosphereMTWTQTLRERWWLAPIAIVVVAAAIVIRIITTPLEVSANVSDGDQAVPRTATIDLHFNQD
Ga0207665_1003427253300025939Corn, Switchgrass And Miscanthus RhizosphereMTWTQTLRRRWWLLPIAILAVAAAIVVRIITTPLEVSANVNDGDQAVPRTATIDLHFNQEMKPASVQHAFVI
Ga0209235_118691713300026296Grasslands SoilMTWTQTLRERWWLAPIAILVVAAAIIIRIITTPLEVNANVSDGDQAVPRTATIDLRFNQDMKADSVQHAFSISPAVLV
Ga0209236_129824013300026298Grasslands SoilMTWTQTLRQRWWLLPIAILVVAAAIVIRIITTPLEVSANVNDGDQAVPRTATIDLRFNQEMKVASVQHAFNITPSVPFAFKAVSPKEFQFRPT
Ga0209265_116291723300026308SoilMTWTQTLRQRWWLAPIAILVVAAAIIIRIITTPLEVNANVNDGDQAVPRTATIDLRFNQDMKADSVQQAFSISPAVLVGFKTVSPREFQ
Ga0209055_118348923300026309SoilMTWTQTLRERWWLAPIAILLVAAAIIIRIITTPLEVNANVNDGDQSVPRTATIDLRFNQ
Ga0209239_106807923300026310Grasslands SoilMTWTHTLRQRWWLLPIAILAVAAAIVIRIITTPLEVSANVNNGDQAVPRTATIDLH
Ga0209761_106479713300026313Grasslands SoilMTWTQTLRERWWLAPIAILLVVAAIIIRIITTPLEVNANVNDGDQAVPRTATIDLRFNQDMKADSVQHAFSISPAVLVGFKAVS
Ga0209761_108930623300026313Grasslands SoilMTWTQTLRERWWLAPIAILVVAAAIIIRIITTPLEVNANVSDGDQAVPRTATIDLRFNQDMK
Ga0209154_106132913300026317SoilMTWTQTLRERWWLAPIAILLVAAAIIIRIITTPLEVNANVNDGDQSVPRTATIDLRFNQDMKADSVQHAFSISPAVL
Ga0209152_1008007513300026325SoilMTWTQTLRQRWWLLPIAVLAVAAAIVIRIITTPLEVSANVNNGDQAVPRTATIDLHFNQE
Ga0209266_105007943300026327SoilMTWTQTLRERWWLAPIAILLVVAAIIIRIITTPLEVNANVNDGDQAVPRTATIDLRFNQDMKADSVQHAF
Ga0209803_128269513300026332SoilMTWTQTLRQRWWLLPIAILVVAAAIVIRIITTPLEVSANVNDGDQAVPRTATIDLRFNQE
Ga0209804_104485643300026335SoilMTWTQTLRERWWLAPIAILLVAAAIIIRIITTPLEVNANVNDGDQSVPRTATIDLRFNQDMK
Ga0209808_103895533300026523SoilMTWTHTLRQRWWLLPIAILAVAVAIVIRIITTPLEVSANVNNGDQAVPRTAT
Ga0209059_107928813300026527SoilMTWTQTLRERWWLAPIAILAVAAAIVIRIITTPLEVSANVTDGERSVPRTATIDLRFNQDMKPDSVQH
Ga0209059_124090923300026527SoilMTWTQTLRERWWLAPIAVLVVLAAIVIRIITTPLEVNANVSDGDQAVPRTAAIDLRFNQDMKPDSV
Ga0209378_125185623300026528SoilMTLTQRLRQRWWLAPIAIFVVAAAIVIRIITTPLEVSANVSDGDQAVPRTATIDLHFNQDMKADSVQRAFSMTPPV
Ga0209806_121472513300026529SoilMTWTQTLRERWWLAPIAILVVAAAIVIRIITTPLEVSANVSNGDQAVPRTATIDLRFNQDMKADSVQHAFTISPAVLVG
Ga0209807_128326913300026530SoilMTWTQTLRERWWLAPIAVLVVLAAIVIRIITTPLEVNANVSDGDQAVPRTAAIDLRFNQDMKPDSVQR
Ga0209807_130188223300026530SoilMTWTQTLRERWWLAPIAILLVAAAIIIRIITTPLEVNANVNDGDQSVPRTATIDLRFNQDMKADSVQHAFSISPAVLVGFKAVSAREFQFRPKMTPSTSYNVS
Ga0209058_103178353300026536SoilMTWTQTLRERWWLAPIAILVVAAAIIIRIITTPLEVNANVNDGDQSVPRTATIDLRFNQDMKA
Ga0209058_123446613300026536SoilMTWTQTLRQRWWLAPIAILLVAAAIVIRIITTPLEVNANVNDGDQAVPRTATIDLRFNQDMKTDSVQHAFRISPAVLVGFKAVSPREFQFKP
Ga0209056_1002163013300026538SoilMTWTQTLRERWWLAPIAILLVAAAIIIRIITTPLEVNANVNDGDQAVPRTATID
Ga0209056_1058241213300026538SoilMTLTQRLRQRWWLAPIAIFVVAAAIVIRIITTPLEVSANVSDGDQAVPRTATIDLHFNQDMKADSVQRAFSMTPPVMVAFKAVSLKEFQF
Ga0209623_100350723300026880Forest SoilMTLTQTVRERWWLAPIAVLLVAAAIAIRIITTPLEVSANVNDGDQAVPRTATI
Ga0208984_100559833300027546Forest SoilMTWTQTLRQRWWLAPIAILVVAAAILIRIITTPLEVSANVNDGDQAVPRTATIDLHFNQDMKAESVRHAFSI
Ga0209735_101312423300027562Forest SoilMTWTQTLRERWWLAPIAILVVAAAIVIRIITTPLEVNANVNDGDQAVPRTATIDLHFNQDMKPDSISEASRNEASMSISRYCSRV
Ga0209527_104726613300027583Forest SoilMTLTQTVRERWWLAPIAVLLVAAAIAIRIITTPLEVSANVNDGDQAVPRTATIDLHFNQDMKPDSVQGA
Ga0209625_101164023300027635Forest SoilMTWTQTLRERWWLAPIAILVVAAAIVIRIITTPLEVNANVNDGDQAVPRTAAIDLHFNQDMKPDSVQHAFTISPSVLV
Ga0209217_110697313300027651Forest SoilMTWTQTLRERWWLAPIAILVVAAAIVIRIITTPLEVSANVSDGDQAVPRTAVIDLRFNQDMKADTVQHAFSITPSVM
Ga0209118_118021513300027674Forest SoilMTWTKTLRERWWLAPIAILVVAAAIVIRIITTPLEVSANVNDGDQSVPRTATIDLHFNQEMKPDSVQRAFSM
Ga0209011_106031613300027678Forest SoilMTWTQTLRQRWWLAPIAILLVAAAIVIRIITTPLEVNANVNDGDQAVPRTATIDLHFNQDMKADSVQHAFTISPSVLVAFKAVSPREFQFRPHMA
Ga0208991_114345613300027681Forest SoilMTWTQTLRERWWLAPIAILLVAAAIIIRIITTPLEVNANVNDGDQAVPRTATIDLHFNQDMKAESVRHAFSISPSVLVAFKAVSPREFRFQPHM
Ga0209626_109105013300027684Forest SoilMTLTQTVRERWWLAPIAVLLVAAAIAIRIITTPLEVSANVNDGDQAVPRTATIDLHFNQDMKPDSVQGAFSMTPNVLVAFKTV
Ga0209328_1015818623300027727Forest SoilMTWTQTLRERWWLAPVAILVVAAAIVIRIITTPLEVSANVNDGDQAVPRTATIDLHFNQDMKADSVQHAFSLSPSVLVAFKAVSPREF
Ga0209689_109750433300027748SoilMTWMQTLRQRWWLAPIAILLVAAAIVIRIITTPLEVNANVNDGDQPVPRTATIDLRFNQDMKPDSVQH
Ga0209689_121124813300027748SoilMTLTQRLRQRWWLAPIAIFVVAAAIVIRIITTPLEVSANVSDGDQAVPRTATIDLHFNQD
Ga0209689_139753423300027748SoilMTWTQTLRERWWLAPIAILVVAAAIVIRIITTPLEVNANVNDGDRAVPRTATIDLHFNQDMKAESVQHAFSI
Ga0209488_1038768223300027903Vadose Zone SoilMTWTQTLRERWWLAPIAIAVVAAAIVIRVITTPLEVSANVSDGDQAVPRTATID
Ga0209583_1046840313300027910WatershedsMTWTQTLRQRWWLAPIAIAVVAAAIVIRIITTPLEVSANVSDGDQAVPRTATIDLHFNQDMKPESVQRA
Ga0222749_1047947623300029636SoilMTWTQTLRERWWLAPIAILVVAAAIAIRIITTPLEVNANVNDGDQAVPRTAAIDLHFNQDMKPDSVQHAFTISPSVLVAFKAVSP
Ga0307477_1003185513300031753Hardwood Forest SoilMTWTQTLRERWWLAPIAVLVVAAAIAIRIITTPLEVNANVNDGDQAVPRTAAIDLHFNQDMKPDS
Ga0307472_10034940213300032205Hardwood Forest SoilMTWTQTLRERWWLAPLAILVVAAAIVIRIITTPLEVNANVNDGDQAVPRTATIDLHFNQDMKADSVQHAFSINPGVMVAFKAVSPRE

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.