NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F106004

Metagenome Family F106004

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F106004
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 68 residues
Representative Sequence MTFRLHQAQYDDQTERAYVEFRRGDGDGGEQFVVAVFTFRTKERLTKQRIKEEVVRKARHVLKGAVLAA
Number of Associated Samples 73
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 69.00 %
% of genes near scaffold ends (potentially truncated) 26.00 %
% of genes from short scaffolds (< 2000 bps) 91.00 %
Associated GOLD sequencing projects 66
AlphaFold2 3D model prediction Yes
3D model pTM-score0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (79.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil
(23.000 % of family members)
Environment Ontology (ENVO) Unclassified
(40.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(80.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.68%    β-sheet: 26.80%    Coil/Unstructured: 50.52%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.72
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.179.1.1: Substrate-binding domain of HMG-CoA reductased1hwla21hwl0.7157
d.179.1.1: Substrate-binding domain of HMG-CoA reductased4i6ya14i6y0.67415
c.55.3.14: Prp8 beta-finger domain-liked4jk8a_4jk80.65597
d.33.1.1: Bacterial protein-export protein SecBd1fx3a_1fx30.65129
f.69.1.2: Membrane attack complex/perforin (MACPF) familyd2qp2a12qp20.64746


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF00027cNMP_binding 4.00
PF05532CsbD 2.00
PF00690Cation_ATPase_N 2.00
PF07992Pyr_redox_2 1.00
PF07883Cupin_2 1.00
PF01972SDH_sah 1.00
PF00196GerE 1.00
PF10415FumaraseC_C 1.00
PF00884Sulfatase 1.00
PF03625DUF302 1.00
PF05694SBP56 1.00
PF00036EF-hand_1 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0474Magnesium-transporting ATPase (P-type)Inorganic ion transport and metabolism [P] 2.00
COG0616Periplasmic serine protease, ClpP classPosttranslational modification, protein turnover, chaperones [O] 2.00
COG3237Uncharacterized conserved protein YjbJ, UPF0337 familyFunction unknown [S] 2.00
COG3439Uncharacterized conserved protein, DUF302 familyFunction unknown [S] 1.00


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A79.00 %
All OrganismsrootAll Organisms21.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664021|ICCgaii200_c0876378All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2014Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101654526Not Available1286Open in IMG/M
3300000955|JGI1027J12803_108031442Not Available555Open in IMG/M
3300004114|Ga0062593_100064582All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2379Open in IMG/M
3300004479|Ga0062595_100235027All Organisms → cellular organisms → Bacteria1172Open in IMG/M
3300004480|Ga0062592_101829498All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300004633|Ga0066395_10353430Not Available817Open in IMG/M
3300005332|Ga0066388_100114357All Organisms → cellular organisms → Bacteria → Proteobacteria3203Open in IMG/M
3300005332|Ga0066388_101345628Not Available1235Open in IMG/M
3300005332|Ga0066388_102516695Not Available936Open in IMG/M
3300005332|Ga0066388_103350858Not Available818Open in IMG/M
3300005332|Ga0066388_105866447Not Available621Open in IMG/M
3300005332|Ga0066388_105983818Not Available614Open in IMG/M
3300005332|Ga0066388_106808578Not Available575Open in IMG/M
3300005347|Ga0070668_101076549Not Available725Open in IMG/M
3300005713|Ga0066905_100029626All Organisms → cellular organisms → Bacteria3082Open in IMG/M
3300005764|Ga0066903_100584881Not Available1928Open in IMG/M
3300005764|Ga0066903_101083230All Organisms → cellular organisms → Bacteria1475Open in IMG/M
3300005764|Ga0066903_107582627All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis559Open in IMG/M
3300006163|Ga0070715_10218191Not Available979Open in IMG/M
3300006175|Ga0070712_100877341Not Available773Open in IMG/M
3300006852|Ga0075433_10085393All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2786Open in IMG/M
3300006854|Ga0075425_101158679Not Available879Open in IMG/M
3300009162|Ga0075423_10446775All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1358Open in IMG/M
3300009168|Ga0105104_10954815Not Available505Open in IMG/M
3300010046|Ga0126384_11394246Not Available653Open in IMG/M
3300010047|Ga0126382_10570848Not Available925Open in IMG/M
3300010358|Ga0126370_11698254Not Available608Open in IMG/M
3300010358|Ga0126370_11763176Not Available598Open in IMG/M
3300010358|Ga0126370_12328775Not Available530Open in IMG/M
3300010359|Ga0126376_11110295Not Available800Open in IMG/M
3300010366|Ga0126379_10768997Not Available1061Open in IMG/M
3300012955|Ga0164298_10271085Not Available1035Open in IMG/M
3300012955|Ga0164298_10898409Not Available644Open in IMG/M
3300012957|Ga0164303_10059342Not Available1736Open in IMG/M
3300012957|Ga0164303_10086026Not Available1515Open in IMG/M
3300012957|Ga0164303_10362132Not Available881Open in IMG/M
3300012960|Ga0164301_10004318All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae5091Open in IMG/M
3300012960|Ga0164301_10032439All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2506Open in IMG/M
3300012960|Ga0164301_10703542Not Available761Open in IMG/M
3300012960|Ga0164301_11553351Not Available547Open in IMG/M
3300012961|Ga0164302_11039986Not Available641Open in IMG/M
3300012971|Ga0126369_11631392Not Available734Open in IMG/M
3300012971|Ga0126369_12687890Not Available582Open in IMG/M
3300012984|Ga0164309_10190367Not Available1402Open in IMG/M
3300012986|Ga0164304_10257903Not Available1173Open in IMG/M
3300012986|Ga0164304_10268107Not Available1154Open in IMG/M
3300012986|Ga0164304_11525693Not Available554Open in IMG/M
3300012988|Ga0164306_10525848Not Available914Open in IMG/M
3300012989|Ga0164305_11579742Not Available585Open in IMG/M
3300016270|Ga0182036_10308315Not Available1207Open in IMG/M
3300016270|Ga0182036_11778057Not Available521Open in IMG/M
3300016294|Ga0182041_10214319Not Available1543Open in IMG/M
3300016341|Ga0182035_10318025Not Available1283Open in IMG/M
3300016357|Ga0182032_11229244All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300016371|Ga0182034_10442112Not Available1075Open in IMG/M
3300016371|Ga0182034_10746434Not Available835Open in IMG/M
3300016371|Ga0182034_10953151Not Available740Open in IMG/M
3300016404|Ga0182037_11624568Not Available575Open in IMG/M
3300016422|Ga0182039_11197432Not Available686Open in IMG/M
3300016445|Ga0182038_10077299Not Available2337Open in IMG/M
3300017947|Ga0187785_10713730Not Available527Open in IMG/M
3300020581|Ga0210399_11538726Not Available515Open in IMG/M
3300021168|Ga0210406_10579084Not Available879Open in IMG/M
3300021560|Ga0126371_10799061Not Available1090Open in IMG/M
3300021560|Ga0126371_11743611Not Available746Open in IMG/M
3300026835|Ga0207782_107152Not Available954Open in IMG/M
3300026895|Ga0207758_1005338All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1408Open in IMG/M
3300026910|Ga0207840_1005886All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1374Open in IMG/M
3300026945|Ga0207743_1003300Not Available1970Open in IMG/M
3300026959|Ga0207852_1011093Not Available977Open in IMG/M
3300026981|Ga0207822_1006540All Organisms → cellular organisms → Bacteria1350Open in IMG/M
3300026990|Ga0207824_1011891Not Available945Open in IMG/M
3300027003|Ga0207722_1018664Not Available770Open in IMG/M
3300027014|Ga0207815_1011132Not Available1160Open in IMG/M
3300027039|Ga0207855_1006037All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1802Open in IMG/M
3300027516|Ga0207761_1038521All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWC2_65_14937Open in IMG/M
3300027915|Ga0209069_10677933All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium603Open in IMG/M
3300028587|Ga0247828_10859578Not Available581Open in IMG/M
3300031474|Ga0170818_114054211Not Available807Open in IMG/M
3300031545|Ga0318541_10617987Not Available606Open in IMG/M
3300031573|Ga0310915_10283863Not Available1168Open in IMG/M
3300031720|Ga0307469_11275635Not Available697Open in IMG/M
3300031720|Ga0307469_12215963Not Available535Open in IMG/M
3300031744|Ga0306918_10449561Not Available1007Open in IMG/M
3300031879|Ga0306919_10611340Not Available841Open in IMG/M
3300031910|Ga0306923_11519626Not Available700Open in IMG/M
3300031912|Ga0306921_11084103Not Available899Open in IMG/M
3300031945|Ga0310913_11155013Not Available540Open in IMG/M
3300031946|Ga0310910_10815052Not Available735Open in IMG/M
3300031947|Ga0310909_10518318All Organisms → cellular organisms → Bacteria999Open in IMG/M
3300031947|Ga0310909_10703251Not Available840Open in IMG/M
3300031954|Ga0306926_11299321Not Available849Open in IMG/M
3300032059|Ga0318533_10883385Not Available656Open in IMG/M
3300032076|Ga0306924_10225319All Organisms → cellular organisms → Bacteria2153Open in IMG/M
3300032076|Ga0306924_10810097Not Available1043Open in IMG/M
3300032076|Ga0306924_11613098Not Available683Open in IMG/M
3300032174|Ga0307470_10487394Not Available896Open in IMG/M
3300032180|Ga0307471_100682710Not Available1191Open in IMG/M
3300032261|Ga0306920_103726955Not Available559Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil23.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil20.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil16.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil11.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.00%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.00%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300026835Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 60 (SPAdes)EnvironmentalOpen in IMG/M
3300026895Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 12 (SPAdes)EnvironmentalOpen in IMG/M
3300026910Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 65 (SPAdes)EnvironmentalOpen in IMG/M
3300026945Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 55 (SPAdes)EnvironmentalOpen in IMG/M
3300026959Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)EnvironmentalOpen in IMG/M
3300026981Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 67 (SPAdes)EnvironmentalOpen in IMG/M
3300026990Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73 (SPAdes)EnvironmentalOpen in IMG/M
3300027003Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 26 (SPAdes)EnvironmentalOpen in IMG/M
3300027014Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 4 (SPAdes)EnvironmentalOpen in IMG/M
3300027039Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)EnvironmentalOpen in IMG/M
3300027516Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICCgaii200_087637812228664021SoilMTFRLHQAQYDNRTERAYVEFRRLDGDGGDQLVVAVFTFRTKELLTKQRIKEEVVLKARHVLKGAVLAA
INPhiseqgaiiFebDRAFT_10165452633300000364SoilMTFRLXQAQYDDQTERAYVEFRRGDGDGGEQVVVAVFSFRTKERTKQRIKEEVVRKARHVLKRAVLAA*
JGI1027J12803_10803144213300000955SoilYDDQNERAYVEFRRGDGDGGEQVVVAVFSFRTKERTKQRIKEEVVRKARHVLKRAVLAA*
Ga0062593_10006458263300004114SoilMTFRLHQAQYDNRTERAYVEFRRLDGDGGDQLVVAVFTFRTKELLTKQRIKEEVVLKARHVLKGAVLAA*
Ga0062595_10023502723300004479SoilMTFRLHQAKYDDQTERAYVELRSFDGDGGEQFVVAVFSFRTKERLTKKRIEEEVVRKARYVLKQAAAAA*
Ga0062592_10182949823300004480SoilMTFRLHQAKYDDQTERAYVELRSFDGTDEQFVVAVFSFRTKERLTKKRIEEEVVRKARYVLKQAAAAA*
Ga0066395_1035343013300004633Tropical Forest SoilMTFRLHQAQYDDQTERAYVEFRRTDGDGGEQLAVAVFTFRTKERLTKQRIKEEVVRKARHVLKGAALAA*
Ga0066388_10011435713300005332Tropical Forest SoilEGPMTFRLHQAQYDDQTERAYVEFRRTDGDGGEQLAVAVFTFRTKERLTKQRIKEEVVRKARHVLKGAALAA*
Ga0066388_10134562813300005332Tropical Forest SoilMSFRLHQAQYDDQTERAYVEFRRGEGDGSEQLVVTVFTFRTKERLTKQRIKEEIVRKARHVLKGAVLAA*
Ga0066388_10251669523300005332Tropical Forest SoilMTFRLHQAQYDDQTERAYVELRRTDGDGGDQLVVIVFTFRTKERLSKQRLREEVVRKARHVLKGAVSAA*
Ga0066388_10335085813300005332Tropical Forest SoilMSFRLHQAQYVDQTERAYVEFRRGDGDGGEQLVVAIFTYRTKERLSKQRIKEEVVRKARH
Ga0066388_10586644723300005332Tropical Forest SoilRLKQAQYDNHTKRAYVEFGRTDGDGGDQLVVAVFTFRTMERLSKQRIKEEVVRKARHVLKRAVFAV*
Ga0066388_10598381813300005332Tropical Forest SoilMTFRLNQAQYDNHTKRAYVELRRPDGDGGDQLVVAVFTFHTRERLSKQRIREEVVRKARHVLKGAALAVRGES*
Ga0066388_10680857813300005332Tropical Forest SoilMTFRLHQAQYDNHSKRAYVEFRRGDGDGGEQLVVAVFTFRTKERLSKQRIREEVVRKARHVLKGAALAA*
Ga0070668_10107654913300005347Switchgrass RhizosphereMTFRLHQAQYDDQTQRAYVEFRRGDGDGSEQLVVAVFTFRTKERLTKQRIKEEVVRKARHVLKGAAIAA*
Ga0066905_10002962623300005713Tropical Forest SoilMSFRLHQAEYDSRTERAYVEFRRGDGDGGEQLVVAVFTFRSKERLSKKRIKEEVVRKARHVLKGAALAA*
Ga0066903_10058488123300005764Tropical Forest SoilMTFRLNQAQYDNHTKRAYVELRRPDGDGGDQLVVAVFTFHTRERLSKQRIREEVVRKARHVLK
Ga0066903_10108323033300005764Tropical Forest SoilMTFRLHQAQYDNHSKRAYVEFRRTDGDGGDQLVVAVFTFRTLERLSKQRIREEVVRKARHVLKGAALAV*
Ga0066903_10758262713300005764Tropical Forest SoilMTFRLHQAQYDNHSKRAYVEFRRGDGDGGEQLVVAVFTFRTKERLSKQRIREEVVRKARHVLKGAVA
Ga0070715_1021819123300006163Corn, Switchgrass And Miscanthus RhizosphereMAERMTFRLHQAQYDGQTERAYVEFRRGDGEGGEQVVVAVFTFRTKERLTKQRIKEEVVRKARHVLKGAVLAA*
Ga0070712_10087734113300006175Corn, Switchgrass And Miscanthus RhizosphereKFMSQGGRMTFRLHQAQYDDQTERAYVEFRRGDGDGGEQVVVAVFSFRTKERLTKQRVKEEVVRKARHVLKGAALAA*
Ga0075433_1008539363300006852Populus RhizosphereMSFRLHQAQYDHHSNRAYVELRRGDGDGGEQLVVAVFTFCTKERLSKQRIKEEVVRKARHVLKQAALA*
Ga0075425_10115867913300006854Populus RhizosphereMMSFRLHQAQYDHHSNRAYVELRRGDGDGGEQLVVAVFTFCTKERLSKQRIKEEVVRKARHVLKQAALA*
Ga0075423_1044677513300009162Populus RhizosphereQAQYDNRTERAYVEFRRLDGDGGDQLVVAVFTFRTKELLTKQRIKEEVVLKARHVLKGAVLAA*
Ga0105104_1095481513300009168Freshwater SedimentMTFRLHQAQYDSRTERAYVEFRRGDGDGGEQLVVTVFTFRSKARLSKQRIKEEVVRRARHVLKGAVLAA*
Ga0126384_1139424623300010046Tropical Forest SoilMSFRLHQPEYDSRTERAYVEFRRGDGDGGEQLVVAVFTFRSKERLSIKRIKEEVVRKARHVLKGAALAA*
Ga0126382_1057084833300010047Tropical Forest SoilMTFRLRQAQYDNHTKRAYVEFWRTDGDGGDQLVVAVFTFRTVERLSKQRIREEVVRKAKHVLKGAVSAV*
Ga0126370_1169825423300010358Tropical Forest SoilMTFRLHQAEYDNHTKQAYVEFRRTDGDGGDQLVVAVFTFSTKERLSKQRIKEEVVRKARHVLKGAVLAA*
Ga0126370_1176317623300010358Tropical Forest SoilYQVQYDNRSKRAYVEFRRGDGDGGEQLVVAVFTFHTRERLSKQRISEEVVRKARHVLKGAALAVRSES*
Ga0126370_1232877513300010358Tropical Forest SoilMTFRRHQAQYDNHSKRAYVEFRRGDGDGGEQLVVAVFTFRTKERLSKQRIREEVVRKARHVLKGAVASS*
Ga0126376_1111029523300010359Tropical Forest SoilMTFRLHQAEYDSHTKRAYVEFRRIDGDGGDQLVVAVFTFSTKERLSKQRIKEEVVRKARHVLKGAALAA*
Ga0126379_1076899733300010366Tropical Forest SoilGGPMTFRLHQAEYDNHTKRAYVEFRRTDGDGGDQLVVAVFTFSTKERLFKQRIKEEVVRKARHVLKGAVLAA*
Ga0164298_1027108533300012955SoilMTFRLHQAQYDDQTERAYVEFRRGDGDGGEQVVVAIFSFRTKERLTKQRSKEEVVRKARHVLKGAVLAA*
Ga0164298_1089840923300012955SoilMTFRLHQAQYDDQTKRAYVEFRRADGDGDEQVVVAVFSYRTKDRLTKPRIKEEVVRKARHVLKRAVLAA*
Ga0164303_1005934223300012957SoilMTFRLQQAQYDDQTKRAYVEFRRADGDGDEQVVVAVFSFRTKERLTKPRIKEEVVRKARHVLKRAVLAA*
Ga0164303_1008602613300012957SoilMTFRLHQAQYDDQTERAYVEFRRGDGDGGEQVVVAIFSFRTKERLTKQRIKEEVARKARHVLKGAVLAA*
Ga0164303_1036213213300012957SoilMAQYDDQTERAYVEFRRGNGDGGEQLVVAIFTFRTKERLTKHRIKEEVVRKARHVLTAAVLAA*
Ga0164301_1000431813300012960SoilMTFRLHQAQYDDQTERAYVEFRRGDGDGGEQVVVAVFSFRTKGRLTKQRIKEEVVRKARHVLKGAVLAA*
Ga0164301_1003243943300012960SoilMTFRLHQAQYDDQTERAYVEFRRGDGDGGEQFVVAVFTFRTKERLTKQRIKEEVVRKARHVLKGAVLAA*
Ga0164301_1070354223300012960SoilMTFRLHQAQYDDQTERAYVEFRRVDGDGGEQVVVAVFSFRTKERLTKQRIKEEVVRKARHVLKGAALAA*
Ga0164301_1155335113300012960SoilLHMAQYDDQTERAYVEFRRGNGDGGEQLVVAIFTFRTKERLTKHRIKEEVVRKARHVLRGAALAA*
Ga0164302_1103998613300012961SoilMTFRLHQAQYDDQTKRAYVEFRRADGDGDEQVVVAVFSFRTKERLTKPRIKEEVVRKARHVLKRAVLAA*
Ga0126369_1163139213300012971Tropical Forest SoilMTFRLHQAQYDNDTQRAYVEFRRDDGDGGEQLIVAVFTYRTKERLSKQRVREEVYPRKAR
Ga0126369_1268789013300012971Tropical Forest SoilMTFRLHQAEYDNHTKRAYVEFRRTDGDGGDQLVVAVFTFSTKERLFKQRIKEEVVRKARHVLKGAVLAA*
Ga0164309_1019036723300012984SoilMAERMTFRLHQAQYDGQTERAYVEFRRGDGDGGEQVVVAVFTFRTKERLTKQRIKEEVVRKARHVLKGAVLAA*
Ga0164304_1025790343300012986SoilMTFRLHQAQYDDQTERAYVEFRRTDGDGGDQLVVAVFTFRTKERLTKQRIKEEVVRKARHVLKGAALAT*
Ga0164304_1026810733300012986SoilMTFRLHQAQYDDQTKRAYVEFRRADGDGDEQVVVAVFSFRTKEPLTKPRIKEEVVRKARHVLKRAVLAA*
Ga0164304_1152569313300012986SoilMAERMTFRLHKAQYDEQTERAYVEFRRGDGDGGEQLVVAVFTFRTKERLTKQRIKEDVVRKARHVLKGAALAA*
Ga0164306_1052584833300012988SoilHQAQYDDQTERAYVEFRKADGDGDEQVVVAVFSFRTKERLTKPRIKEEVVRKARHVLKRAVLAA*
Ga0164305_1157974223300012989SoilMAKYDDQTERAYVEFRRGNGDGGEQLVVAIFTFRTKERLTKHRIKEEVVRKARHVLRGAALAA*
Ga0182036_1030831533300016270SoilLGQMMSFRLHQAQYDHHGKRAYVEFRRGDDDGGEQFVVAVFTYCTKEWLSKQLIKEEVVRKARHVLK
Ga0182036_1177805713300016270SoilMQYDNHSKRAYVEFRRTDGDGGDQLVVAVFTFRTKERLSKQRIKEEVVRKARYLLKGAALAA
Ga0182041_1021431933300016294SoilMSFRLHQAQHDHHSKRAYVEFRRGDDDGGEPFVVAVFTYCTKEWLSKQLIKEEVVRKARHVLK
Ga0182035_1031802513300016341SoilMSFRLHQAQYDHHNKRAYVEFRRDDDDGGEQFVVAVFTHCTKEWLSKQLIKEEVVRKARHVLK
Ga0182032_1122924433300016357SoilRCTGEDQTERAYVEFRRTDGDGGDQLAVAVFTFRTKERLTKQRIKEEVVHKARHVLKWAALAA
Ga0182034_1044211213300016371SoilMTFRLHQAQYDDQTERAYVEFRRTDGDGGDQLAVAVFRFRAKERLTKQRIKEEVVHKARHVLKGAALAA
Ga0182034_1074643413300016371SoilMSFRLHQAQYDHHGKRAYVEFRRGDDDGGEPFVVAVFTYCTKEWLSKQLIKEEVVRKARHVLK
Ga0182034_1095315113300016371SoilMSFRLHQAEYDNRSQRAYVEFRRDDDTDGGEQLVVAIFTFRTRDRLSKQRVKEEVVRKARHVLKGAVAAT
Ga0182037_1162456813300016404SoilMTFRLHQAEYHNHGKRAYVEFRRSDSDGGDQLVVAVFTFRTKERLSKQGIKEEVVRKA
Ga0182039_1119743213300016422SoilGRPSKTTIEGSMSFRLHQAEYDNRSQRAYVEFRRDDDTDGGEQLVVAIFTFRTRDRLSKQRVKEEVVRKARHVLKGAVTAT
Ga0182038_1007729923300016445SoilMTFRLHQAQYDDQTERAYVEFRRTDGDGGDQLAVAVFTFRTKERLTKQRIKEEVVRKARHVLKGAALAA
Ga0187785_1071373023300017947Tropical PeatlandMTFRLHQAEYDNHTKRAYVEFRRIDGDGGDQLVVAVFTFHTKERLSKQQIKEEVVRKARHVIKGAALAA
Ga0210399_1153872623300020581SoilMTFRLHQVQYDDQTERAYVEFRRGDGDGGEQVVVAVFTFRTKERLTKQRIKEEVVRKARHVLKGAVLAA
Ga0210406_1057908423300021168SoilMTFRLHQAQYDDQTERAYVEFRRVDGDGGEQVVVAVFSFRTKERLTKQRIKEEVVRKARHVLKGAVLAA
Ga0126371_1079906123300021560Tropical Forest SoilMTFRLHQAQYDNHSKRAYVEFRRGDGDGGEQLVVAVFTFRTKERLSKQRIREEVVRKARHVLKGAVAAT
Ga0126371_1174361123300021560Tropical Forest SoilMTFRLHQAQYDDQTERAYVEFRRTDGDGGEQLAVAVFTFRTKERLTKQRIKEEVVRKARHVLKGAALAA
Ga0207782_10715213300026835Tropical Forest SoilMTFRLHQAQYDQDTERAYVELRRRDDDGGDQYVVAVFTFRTKERLTKRQIEDEVVRKARYVLKRAAEAA
Ga0207758_100533823300026895Tropical Forest SoilMTFRLHQAQYDQDTERAYVELRRRDDDGGDQHVVAVFTFRTKERLTKRKIEDEVVRKARHILKRAAEAA
Ga0207840_100588623300026910Tropical Forest SoilMMTFRLHQAQYDQDTERAYVELRRRDDDGGDQYVVAVFTFRTKERLTKRQLEDEVVRKARHILKRAPEAA
Ga0207743_100330033300026945Tropical Forest SoilMMTFRLHQAQYDQDTERAYVELRRRDDDGGDQHVVAVFTFRTKERLTKRQIKDEVVRKARHILKRAAEAA
Ga0207852_101109323300026959Tropical Forest SoilMMTFRLHQAQYDQDTERAYVELRRRDDDGGDQYVVAVFTFRTKERLTKRQIEDEVVRKARYVLKRAAEAA
Ga0207822_100654023300026981Tropical Forest SoilMTFRLHQAQYDEDTERAYVELRRRDDDGGDQYVVAVFTFRTKERLTKRQIEDEVVRKARYVLKRAAEAA
Ga0207824_101189113300026990Tropical Forest SoilMMIFRLHQAQYDQDTERAYVELRRRDDDGGDQHVVAVFTFRTKERLTKRQIEDEVVRKARYVLKRAAEAA
Ga0207722_101866423300027003Tropical Forest SoilVTFRLHQAQYDQDTERAYVELRRRDDDGGDQHVVAVFTFRTKERLTKRQIEDEVVRKARYVLKRAAEAA
Ga0207815_101113223300027014Tropical Forest SoilMMTFRLHQAQYDDQTERAYVELRRRDDDGGDQHVVAVFTFRTKERLTKRQIEDEVVRKTRYILKRAAEAA
Ga0207855_100603723300027039Tropical Forest SoilMMTFRLHQAQYDQDTERAYVELRRRDDDGGDQHVVAVFTFRTKERLTKRQIEDEVVRKARHILKRAAEAA
Ga0207761_103852123300027516Tropical Forest SoilMTFRLHQAQYDQDTERAYVELRRRDDDGGDQHVVAVFTFRTKERLTKRQIEDEVVRKARHILKRAAEAA
Ga0209069_1067793323300027915WatershedsNTRGPMTFRLHQAQFDDQTGRAYVEFRRGDGDGGEQVVVAVFSFRTKERLTKQRIKEEVVRKARHLLRAIY
Ga0247828_1085957813300028587SoilMTFRLHQAQYDSRTELAYVEFRRGEGDGSEQVVVAVFSFRTKERLTKQRIKEEVVRKARHVL
Ga0170818_11405421133300031474Forest SoilMTFRLHQAQYDDQTERAYVEFRRGDGDGGEQVVVAVSSFRTKERLTKQRIKEEVVRKARHVLKGAVLAA
Ga0318541_1061798713300031545SoilPLKYYQGGPMTFRLRQAQYDDQTERAYVEFRRTDGDGGDQLAVAVFTFRTKERLTKQRIKEEVVRKARHVLKGAALAA
Ga0310915_1028386323300031573SoilMTFRLHQAQYDDQTERTYVEFRRTDGDGGDQLAVAVFTFRTKERLTKQRIKEEVVRKARHVLKGAALAA
Ga0307469_1127563523300031720Hardwood Forest SoilMTFRLHQAQYDNQTERAYVEFRRGDGDGSEQLVVAVFTFRTKERLSKQRIKDEVVRKARHVLKGAVLVA
Ga0307469_1221596313300031720Hardwood Forest SoilMTFRLHQAKYDDQTERAYVELRRRDDDGGEQHVVVVFTFRTKESLTKRRIEEEVVRKARYVLKRAAAVA
Ga0306918_1044956113300031744SoilHWTAGLGEMMSFRLHQAQYDHHGKRAYVEFRRGDDDGGEPFVVAVFTYCTKEWLSKQLIKEEVVRKARHVLK
Ga0306919_1061134023300031879SoilMTFRLHQAQYDDQTERAYVEFRRTDGDGGDQLAVAVFTFRTKERLTKQRIKEEVVHKARHVLKGAALAA
Ga0306923_1151962623300031910SoilMSFRLHQAQYDYHNKRAYVEFRRGDDDGGEQFVVAVFTYCTKEWLSKQLIKEEVVRKARHVLT
Ga0306921_1108410313300031912SoilRHWTVGLGEMMSFRLHQAQYDHHNKRAYVEFRRGDDDGGEQFVVAVFTYCTKEWLSKQLIKEEVVRKARHVVK
Ga0310913_1115501323300031945SoilGDDQTERAYVEFRRTDGDGGDQLAVAVFTFRTKERLTKQRIKEEVVHKARHVLKGAALAA
Ga0310910_1081505223300031946SoilMSFRLHQAQYDYHNKRAYVEFRRGDDDGGEPFVVAVFTYCTKEWLSKQLIKEEVVRKVRHVLK
Ga0310909_1051831833300031947SoilQTERAYVEFRRTDGDGGDQLAVAVFTFRTKERLTKQRIKEEVVRKARHVLKGAALAA
Ga0310909_1070325113300031947SoilMTFRLHQAQYDDQTERAYVEFRRTDGDGGDQLAVAVFTFRTKERLTKQRIKEEVVRK
Ga0306926_1129932113300031954SoilMSFRLHQAEYDNRSQRAYVEFRRDDDTDGGEQLVVAIFTFRTRDRLSKQRIKQEVVRKARHVLKRAALAT
Ga0318533_1088338513300032059SoilMSFRLHQAQYDHHGKRAYVEFRRGDDDGGEQFVVAVFTYCTKEWLSKQLIKEEVVRKARHVLK
Ga0306924_1022531913300032076SoilMTFRLRQAQYDDQTERAYVEFRRTDGDGGDQLAMAVFTFRTKERLTKQRIKEEVVRKARHVLKGAALAA
Ga0306924_1081009713300032076SoilMMSFRLHQAQYDHHGKRAYVEFRRGDDDGGEPFVVAVFTYCTKEWLSKQLIKEEVVRKARHVLK
Ga0306924_1161309813300032076SoilEYDNRSQRAYVEFRRDDDTDGGEQLVVAIFTFRTRDRLSKQRVKEEVVRKARHVLKGAVAAT
Ga0307470_1048739423300032174Hardwood Forest SoilMTFRLHQAQYDNQTERAYVEFRRGDGDGSEQLVVAVFTFRTKERLSKQRIKDEVVRKARHVLKGAVLAA
Ga0307471_10068271043300032180Hardwood Forest SoilTFRLHQAQYDNQTERAYVEFRRGDGDGSEQLVVAVFTFRTKERLSKQRIKDEVVRKARHVLKGAVLAA
Ga0306920_10372695513300032261SoilSMSFRLHQAQYDNRSKRAYVEFRRSDSDGGDQLVVAVFTFRTKERLSKQGIKEEVVRKARYVLKGAVLAV


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