Metagenome Family F106022

Basic Information
Family ID	F106022
Family Type	Metagenome
Number of Sequences	100
Average Sequence Length	86 residues
Representative Sequence	VRRNLFTKLALGFFVLLLCVLVAVDFFADRALQRDYERTGFEQLLAIARIAQSNPPQLNSLPPEKPEEISALQTWMQHIAASGARVTV
Number of Associated Samples	91
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	66.67 %
% of genes near scaffold ends (potentially truncated)	3.00 %
% of genes from short scaffolds (< 2000 bps)	3.00 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Most Common Taxonomy
Group	Unclassified (99.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.000 % of family members)
Environment Ontology (ENVO)	Unclassified (24.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (37.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.21% β-sheet: 0.00% Coil/Unstructured: 38.79%
Feature Viewer

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Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF00486	Trans_reg_C	94.00
PF16870	OxoGdeHyase_C	4.00
PF00072	Response_reg	1.00
PF00069	Pkinase	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	4.00

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.00 %
All Organisms	root	All Organisms	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.00 %
cellular organisms	root	All Organisms → cellular organisms	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.00 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.00 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.00 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300013306\|Ga0163162_11692460	Not Available	722	Open in IMG/M
3300031912\|Ga0306921_10517229	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1387	Open in IMG/M
3300031941\|Ga0310912_11280969	Not Available	556	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.00%
Host-Associated	Host-Associated	10.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.00%
Plants	Host-Associated → Plants	10.00%
Aquatic	Environmental → Aquatic	1.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.00%
Freshwater	Environmental → Aquatic → Freshwater	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.00%
Loam	Environmental → Terrestrial → Soil → Loam	9.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.00%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.00%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.00%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	9.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.00%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.00%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.00%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300024275	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK15	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_11769092	2228664022	Soil	VRRNLFKKLALVFFVLVLGVLAAVDYFADRALRRDYERRGFEQLHTIARIAQENPPQFSAVPPTDPQEIAALQTWIRR
JGI25614J43888_100611961	3300002906	Grasslands Soil	VRRNLFKKLALFFFTLLLGVLIAADSFADRALRRDYERKGFEQLLAISSIAQSDPPKFAALPTEKLEETAALHTWIEHIAASGARVTVVTSSGMVLADSQ
JGI25616J43925_101167501	3300002917	Grasslands Soil	VRRNLFTKLALAFFALLLSVLLAVDFFADRALRRDYQRTGFEQLLAIALIAQSNPPEFTALPPEKPEEIAALQL
Ga0066672_105949772	3300005167	Soil	VRRNLFTKLALGFFVLLLCVLLAVDFFADRALQRDYQRTGFEQLQTITRIAQADPPQFSSLPPEKPEEISSLQSWVARIAASGA
Ga0070711_1004129501	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LALLLCVLVAVDFFADRAIRRDYERTGFEQLQAIAKLAQANPPELGALPSEKPEEAAALE
Ga0070705_1002304612	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VRRNLFTKLALAFFVLLLSVLIAVDFFADRALQRDYVRTGFEQLVAIARIAQANPPQLSSIPPEKPEEIAALETWTRHIAASGARITVVTADGLVLSDSQSDP
Ga0066686_108678282	3300005446	Soil	VRRNLFTKLALAFFVLLLSVLLAVDFFADRALQRDYVRTGFEQLIAIARIAQANPPQLSSIPPEKPEEIVAI
Ga0070699_1017188201	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VRRNLFTKLALAFFVLLLSVLIAVDFFADRALQHDYVRTGFEQLIAIAQIAQANPPQLSSLPPEKPEEIDALETWTRHIAASGA
Ga0066697_106530981	3300005540	Soil	VRRNLFTKLALAFFVLLLSVLIAVDFFADRALQRDYVRTGFEQLIAIAQIAQANPPQLSSLPPEKPEEIDALETWTRHIAASGA
Ga0070665_1017639372	3300005548	Switchgrass Rhizosphere	VRRNLFTKLALAFFALLLSVLMVVDFFADHALRRDYERTGFEQLQAIARIAQENPPQFSALPPTDPQEISALQSWMRHMATSGARVTVVTAEGL
Ga0066695_104490131	3300005553	Soil	VLLLSVLIAVDFFADRALQRDYVRTGFEQLIAIAQIAQANPPQLSSLPPEKPEEIDALETWTRHIAASGARI
Ga0066704_103055362	3300005557	Soil	VLLLSVLIAVDFFADRALQHDYVRTGFEQLIAIAQIAQANPPQLSSLPPEKPEEIDALETWTRHI
Ga0066702_106546241	3300005575	Soil	VRRNLFSKLALAFFVLLLSVLLAVDFFADRALQRDYQRTGFEQLTAIASIAQANPPEFTSLPPEKPEEISALQSWAQRIGASGTRVTMVTKDGLVLADSQS
Ga0066708_108855292	3300005576	Soil	VRRNLFSKLALAFFVLLLSVLLAVDFFADRALQRDYQRTGFEQLTAIASIAQANPPEFTSLPPEKPEEISALQSWAQRIGASGTRVTVVTKDGLV
Ga0066706_105593641	3300005598	Soil	VLLLSVLIAVDFFADRALQHDYVRTGFEQLIAIAQIAQANPPQLSSLPPEKPEEIDALETWTRHIAASGA
Ga0066706_108912182	3300005598	Soil	VRRNLFAKLVAAFAALLLGVLAAVDFFADRALRRDYERTGFEQLQAIARIAQANPPQFDKLLPTDSQGISALQVWVRHI
Ga0070715_100559391	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VRRNLFTKLALAFFVLLLGVLLAVDFLADRALQRDYERTGFEQLTAIARIAQANPPQLNSLPPEKPDEISALQGWVARIAASGARITVVTADGLVL
Ga0070715_101360021	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VLLLSVLLAVDFFADRALQRDYVRTGFEQLIAIARIAQANPPQLSSIPPEKPEEIAALETWTRHIAASGARITVVTADGLVLSDSQSDPKTME
Ga0070712_1013229992	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VRRNLFTKLALAFFALLLSVLMVVDFFADHALRRDYERTGFEQLQAIARIAQENPPQFSALPPTDPQEISALQTWMRH
Ga0075425_1001995953	3300006854	Populus Rhizosphere	VRRNLFTKLALAFLLLLVGVLVVVDFFADRALQRDHVRAGFEQLVAIARVAQSNPPPLTSLPVEKPEEIAALETWMRHIAASGVRVTVVTEEGVVVADSQSSPRAIENRAEGADITQALR
Ga0075425_1020629391	3300006854	Populus Rhizosphere	VRRNLFAKLALAFAALLLSVLAAVDFFADRALRRDYERTGFEQLHAIARIAQENPPQFTTLPPVDPQEISALQTWLRHLAA
Ga0075426_106624672	3300006903	Populus Rhizosphere	VLAAVDFFADRALRRDYERRGFEQLQTIARIAQENPPQFSAVPPTDPQEIAALQTWIRRMAASGA
Ga0075436_1006991891	3300006914	Populus Rhizosphere	VRRNLFKKLALVFFVLVLGVLAAVDYFADRALRRDYERRGFEQLHTIARIAQENPPQFSVVPPTDPQEIAALQTWIRRLAASGARVTVI
Ga0075436_1012157372	3300006914	Populus Rhizosphere	VRRNLFTKLALVFFVLLLGVLAAVDFFADRALRRDYERRGFEQLQTIARIAQENPPQFSVVPPTDLQEIAALQTWMRRIAASGARVTVI
Ga0099795_100185571	3300007788	Vadose Zone Soil	VRRNLFTKLALGFFVLLLCVLLAVDFFADRALQRDYERTGFEQLLAIARIAQSNPPQLTSLSPEKPEEISALQTWMQHIAAGGARVTVI
Ga0099792_101625593	3300009143	Vadose Zone Soil	VRRNLFTKLALGFFVLLLCVLLAVDFFADRALQRDYERTGFEQLLAIARIAQSNPPQLTSSSPEKPEEISALQTWMQHIAAGGTRVT
Ga0099792_107470722	3300009143	Vadose Zone Soil	VRRNLFTKLALAFFVLLLGVLLAVDFLADRALQRDYERTGFEQLTAIARIAQANPPQLNSLPPERPDEISALQGWVARIAASGARITVVTADGLVLADSQSDPHTME
Ga0105243_102929713	3300009148	Miscanthus Rhizosphere	VRRNLFTKLALAFFALLLSVLMVVDFFADRALRRDYERTGFEQLQAIARIAQDNPPQFSALPPTDAQEISA
Ga0126380_102414391	3300010043	Tropical Forest Soil	VRRNLFTKLALVFCVLLLGVLAAVDFFADRALRRDYERTGFEQLQAIGRVAQESAPQLSALPPVDAQEISALETWTRRMASSGARVSIITAEGLVLADSQDDPQTMGNHA
Ga0126384_104154762	3300010046	Tropical Forest Soil	VRRNLFTKLALVFCVLLLGVLAAVDFFADRALRRDYERTGFEQLQAIGRVAQESAPQLSALPPVDAQEISALQTWTRRMASSGARVTI
Ga0126382_103001491	3300010047	Tropical Forest Soil	VRRNLFTKLALVFFVLLLGVLAAVDFFADRALRRDYERTGFEQLQAIGRVAQESAPQLSALPPVDAQEISALETWTRRMASSGAR
Ga0126370_115106622	3300010358	Tropical Forest Soil	VRRNLFTKLAVAFFALLLGVLMVVDFFADRALRHDYERTGFEQLAAIARIAQANAPQFSALPPTDPQEISALQTW
Ga0134066_101840582	3300010364	Grasslands Soil	VRRNLFTKLALAFFVLLLSVLIAVDFFADRALQRDYVRTGFEQLVGIGRIAQANPPQLSAIPPEKPEEIAALETW
Ga0137392_112040431	3300011269	Vadose Zone Soil	VRRNLFTKLALAFFALLLSVLLAVDFFADRALRRDYQGTGFEQLLAIALIAQSNPPQFTALPPEKPEEIAALQLWIRQIAASGARVTVVTADGLVLADSQ
Ga0137393_107123671	3300011271	Vadose Zone Soil	VRRNLFTKLASGFFVLLLCTLLAVDFFTDRALQRDYERAGFEQLLAIAGIAQSNPPQLNSLPPEKPEEISALQTWMQHIAAGGARVTVIT
Ga0137389_116941361	3300012096	Vadose Zone Soil	VRRNLLTKLALAFFALLLSVLIAVDFFADRALRHDYERTGFEQLIAIASIAQSNPPQFTSLPPEKPEEIAAL
Ga0137363_112641722	3300012202	Vadose Zone Soil	VRRNLFKKLALFFFTLLLGVLIAADSFADRALRRDYERKGFEQLLAISSIAQSDPPKFAALPTEKPEETAALHAWTQHIAASGARVTVV
Ga0137360_103432092	3300012361	Vadose Zone Soil	VRRNLFTKLALGFFVLLLCVLLAVDFFADRALQRDYERTGFEQLLAIARIAQSNPPQLTSLSPEKPEEISALQTWMQHIAA
Ga0137361_105951041	3300012362	Vadose Zone Soil	VRRNLFTKLALGFFVLLLCVLLAVDFSADRALQRDHERTGFEQLLAIARIAQANPPPLTSLPPEKPEEISALQTWMQHIAASGARVTVITAGGLVLADSQ
Ga0137358_102085381	3300012582	Vadose Zone Soil	VRRNLFTKLALTFVALLLCVLVAVNFFADRVLQRDYERTGFEQLLAIARVAQADPPQLRSLPPEKPEEISALQTWM
Ga0137398_101779911	3300012683	Vadose Zone Soil	VRRNLFTKLALAFFALLLSVLLAVDFFADRALRRDYQRTGFEQLLAIALIAQSNPPQFSALPPEKPEEIAALQVWIK
Ga0137394_104106981	3300012922	Vadose Zone Soil	VRRNLFTKLALGFFVLLLCVLLAVDFFADRALQRDYQRTGFEQLQAIARIAQSNPPQLTSLSPEKPEEISALQTWM
Ga0137419_101910463	3300012925	Vadose Zone Soil	VRRNLFTKLALAFFVLLLSVLIAVDFFADRALQRDYVRTGFEQLIAIARIAQANPPQLSSIPPEKPEEIAALETWTRHIAASGARVT
Ga0137404_100928933	3300012929	Vadose Zone Soil	VRRNLFTKLALAFFVLLLSVLLAVDFFADRALQRDYVRTGFEQLIAIARIAQANPPQLSSIPPEKPEEIAALETWTRHIAASGARIT
Ga0163162_116924601	3300013306	Switchgrass Rhizosphere	VRRNLFAKLALAFAALLLSVLAAVDFFADRALRRDYERTGFEQLHAIARIAQENPPQFTTLPPVDPQ
Ga0157379_126121041	3300014968	Switchgrass Rhizosphere	VRRNLFTKLALPFFVLLLSVLIAVDFFADRALQRDYVRTGFEQLVAIARIAQANPPQLSSIPPEKPEEIAALETWTRHFAASGA
Ga0137411_13287755	3300015052	Vadose Zone Soil	LSVLLAVDFFADRALRRDYQRTGFEQLLAIALIAQSNPPEFTALPPEKPEEIAALQLWIKQIAASGARVTVVTADGLVLAIRNPTR*
Ga0137405_12818122	3300015053	Vadose Zone Soil	VRRNLFTKLALAFFVLLLSVLLAVDFFADRALQRDYVRTGFEQLIAIARIAQANPPQLSSIPPEKPEEIAALETWTRHIAASGARITVATADGLVL
Ga0137418_100440505	3300015241	Vadose Zone Soil	VRRNLFTKLALGFFVLLLCVLLAVDFFADRALQRDYERTGFEQLLAVARIAQASPPQLGSLPQEKPEEISTLQAWSQRIAASGAPIQSAADVCKISLRPQRIGRA*
Ga0137403_100618391	3300015264	Vadose Zone Soil	VRRNLFTKLALAFFALLLSVLLAVDFFADRALRLDYQRTGFEQLLAIGRIAQSSAPPFTSLPPEKPDENAALQTWMRQIAASGARVTVVTLEGL
Ga0132255_1001310721	3300015374	Arabidopsis Rhizosphere	VRRNLFKKLALVFFVLVLGVLAAVDYFADRALRRDYERRGFEQLHTIARIAQENPPQFSAVPPTDPQEIAALQTWIRRLAASGARVTVI
Ga0182036_114528831	3300016270	Soil	VRRNLFTKLALFFFGPLVLVLVAVDFFADRALQRDYQRTGFEQLLALSRIAQSNPPDVSSFPPERPEDVSALQTWTRHLAASGVRVTVIAGDGTVLADSQADAQT
Ga0182035_113438691	3300016341	Soil	VRRNLFTKLALAFFALLLGVLIAVDFFAERALRRDYERTGFQQLEAIARIAREISPQFGAAPPSDQQEAAALESWVRHIAAAGVRVTVMSGEGR
Ga0187823_100395951	3300017993	Freshwater Sediment	MAFVTLLLSVLIVVDFFADRALRRDYQRTGFEQLEAIARVAQADPPQFTALPPSDPQEKLTLQT
Ga0193727_11609192	3300019886	Soil	VLLLCVLLAVDFFADRALQRDYERTGFEQLLAIARIAQSNPPQLTSLSSEKPEEISALQTWMQHMAASGARVTVITAGGLVL
Ga0193728_10658013	3300019890	Soil	VRRNLFTKLALGFFVLLLCVLLAVDFFADRALQRDYERTGFEQLLAIARIAQANPPQLTALSPEKPEEISALQTWMQHIAASGARVTVITAG
Ga0210393_113840891	3300021401	Soil	VRRNLFTKLALFFFTLLLGVLIAADSFADRALRRDYERKGFEQLLAIASIAQSDPPKLTALPPEKPEEIAALKSWMQHIAASGA
Ga0210392_101461351	3300021475	Soil	VRRNLFTKLALTFFALLLCVLVAVDFFADRVLQRDYERTGFEQLLAIARVAQADPPQLSSLPPEKPEEISALQTWMHHIAASGARVTVVTA
Ga0247674_10340542	3300024275	Soil	VRRNLFTKLALVFFALLLSVLAAVDFFADRALRQDFERTGFEQLLAIARIAQENPPQFTALPPVDPLEISALQSWTRRMGASGARLTIVAADGLVLADSQ
Ga0207685_105026421	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VQRNLFTKLALIFFLLLLIVSLAVDFIADRTLQRDHERTGLEQLTAIARIARANPPELSSLAPGKPGEVSALQNWVARMAASGARVTVVTADGLVLADSESD
Ga0207699_103104841	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VRRNLFTKLALAFLLLLVGVLVVVDFFADRALQRDHVRAGFEQLVAIARVAQSNPPPLTSLPVEKPEEIAALETWMRHIAASGVSVTVVT
Ga0207646_104329371	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VAFFALLLSVLIAVDFFADRSLRRDYERTGFEQLLAIARIAQASPPQLTALPPEKPEEISALQTWMQHIAASGARVTVVTPGGLVLAD
Ga0257147_10164232	3300026475	Soil	VLLLCVLLAVDFFADRALQRDYERTGFEQLLAIARIAQSNPPQLTSLSPEKPEEISALQTWM
Ga0257158_10603561	3300026515	Soil	VLLLCVLLGVDFFADRALQHDYERTGFEQLLAIARIAQSNPPQLTSFSPEKPEEISALQTWMQHIAASGARVTVITAG
Ga0209167_101557691	3300027867	Surface Soil	MAFVTLLLSVLIVVDFFADRALRRDYQRTGFEQLEAIARVAQADPPQFTALPPSDPQEKLTLQTWMKQMGASGARVTVITAEGLVLADSESDPQTME
Ga0247682_10556041	3300028146	Soil	VRRNLFTKLALVFFALLLSVLAAVDFFADRALRQDFERTGFEQLLAIARIAQENPPQFTALPPVDPLEISALQSWTRRMGASGARLTIVAADGLVLADSQSEPQT
Ga0170834_1081021531	3300031057	Forest Soil	VLLLCVLVAVDFFADRALQRDYERTGFEQLLAIARIAQSNPPQLTSLSPERPEEISALQTWMQHI
Ga0170822_128883512	3300031122	Forest Soil	VLLLCVLLAVDFSADRALQRDYERTGFEQLLAIARIAQSNPPQLTSLPPEKPEEISALQTWMQH
Ga0170824_1227467782	3300031231	Forest Soil	VRRNLFTKLALGFFVLLLCVLVAVDFFADRALQRDYERTGFEQLLAIARIAQSNPPQLNSLPPEKPEEISALQTWMQHIAASGARVTV
Ga0170824_1235738422	3300031231	Forest Soil	VRRNLFTKLALAFFALLLGVLIAVDYFADRELRRDYERTGFEQLIAIASIAQSNPPQFTALPPEKTDEIATLQTWLHHIAASGARVTVVTSDGLVL
Ga0310915_111298932	3300031573	Soil	VRRNLFTKLVLAFFALLLGVLVAVDFFAERALRRDYERTGFEQLEAIAHIAEESPPHLSALPPSDPGEVAALASWMRHIAAAGSRVTVLTPDGLVLADS
Ga0318542_105845451	3300031668	Soil	VRRNLFTKLALVFFVLLLGVLAAVDFFADRALRRDYERTGFEQLQAIGRVAQESAPQLSALPPVDAQEISGLQTWTRRMASS
Ga0318561_104804611	3300031679	Soil	VRRNLFTKLALAFFALLLGVLVAVDFFAERALRRDYERTGFEQLEAIARIAREISPQFGAAPPSDQQEAAALE
Ga0307476_108042391	3300031715	Hardwood Forest Soil	VRRNLFAKLALAFVTLLLSVVVVDFFADRQLRRDYQRTGFEQLEAIAGIARSNPPPFSALSSGDSKDNS
Ga0307474_108312252	3300031718	Hardwood Forest Soil	VRRNLFTKLALTFFVLLLCVLGAVVFFADRALQRDYERTGFEQLLAIARIAQSDPPQLTSLPPEKPEEISALQTWMHHIAASGAR
Ga0306917_108687012	3300031719	Soil	VRRNLFTKLALAFFALLLGVLIAVDFFAERALRRDYERTGFQQLEAIARIAREIPPQFSALPPSDPREIAALQSWMRHIAAAGVRVTVMSSDGLVLADSQPSAA
Ga0306917_109684511	3300031719	Soil	VRRNLFTKLVLAFFALLLGVLVAVDFFAERALRRDYERTGFEQLEAIAHIAEESPPHLSALPPSDPGEIAALASWMRHIAAAGSRVTVLTPDGLVLADSDFTAQTTGEDRRARPEVAAAVAEGSGRSIR
Ga0318500_105608001	3300031724	Soil	VRRNLFTKLALVFFVLLLGVLAAVDFFADRALRRDYERTGFEQLQAIGRVAQESAPQLSALPPVDAQEISGLQTWTRRMASSGARVTIITAEGQVLADSQADPQTM
Ga0318521_104827692	3300031770	Soil	VRRNLFTKLALVFFVLLLGVLAAVDFFADRALRRDYERTGFEQLQAIGRVAQESAPQLSALPPVDAQEIS
Ga0318546_100871173	3300031771	Soil	VRRNLFTKLALVFFVLLLGVLAAVDFFADRALRRDYERTGFEQLQAIGRVAQESAPQLSALPPVDAQEISGLQTWTRHM
Ga0318565_105501471	3300031799	Soil	VRRNLFTKLALTCFALLLGVLVAVDFFAERALRRDFERTGFAQLEAIARIAEESPPQFGALPPSDPREIAA
Ga0307473_101477253	3300031820	Hardwood Forest Soil	VLLLSVLITVDFFADRALQRDYVRTGFEQLIAIARIAQANPPQLSAIPPEKPEEIAALETWTRHTAVSGVRVTVVTADGLVFSDSQS
Ga0310917_108098292	3300031833	Soil	VRRNLFTKLALFFFGPLVLVLVAVDFFADRALQRDYQRTGFEQLLALSRIAQSNPPDVSSFPPERPEDVSALQTWTRHLAASGVRVSVIA
Ga0306925_108352131	3300031890	Soil	VRRNLFTKLALAFFALLLGVLIAVDFFAERALRRDYERTGFQQLEAIARIAREIPPQFSALPPSDPREIAALQSWMLHIAAAGVRVTVMSSDGLVLADSQPSAASPG
Ga0306923_106419273	3300031910	Soil	VRRNLFTKLVLAFFALLLGVLVAVDFFAERALRRDYERTGFEQLEAIAHIAEESPPHLSALPPSDPGEI
Ga0306921_105172293	3300031912	Soil	VRRNLFTKLVLAFFALLLGVLVAVDFFAERALRRDYERTGFEQLEAIAHIAEESPPHLSALPPSDP
Ga0310912_112809691	3300031941	Soil	VRRNLFTKLALAFFALLLGVLIAVDFFAERALRRDYERTGFQQLEAIARIAREIPPQFSALPPSD
Ga0310910_100858121	3300031946	Soil	VRRNLFTKLVLAFFALLLGVLVAVDFFAERALRRDYERTGFEQLEAIAHIAEESPPHLSALPPSDPGEIAALASWKRHIAAAGSRVTVL
Ga0310909_103913712	3300031947	Soil	VRRNLFTKLVLAFFALLLGVLVAVDFFAERALRRDYERTGFQQLEAIAHIAEESPPHLSALPPSDPGEIAA
Ga0307479_109487981	3300031962	Hardwood Forest Soil	VLLLCVLGAVVFFADRALQRDYERTGFEQLLAIARIAQSDPPQLTSLPPEKPEEISALQTWMHHIAASGARVTVVTADGLVLADSQSDSQTMEN
Ga0306922_115176442	3300032001	Soil	VRRNLFTKLVLAFFALLLGVLVAVDFFAERALRRDYERTGFEQLEAIAHIAEESPPHLSALPPSDPGEVAALASWMRHIAAAGSRVTVLTPDGLVLADSDFTAQTT
Ga0318563_100658383	3300032009	Soil	VRRNLFTKLALVFFVLLLGVLAAVDFFADRALRRDYERTGFEQLQAIGRVAQESAPQLSALPPVDAQEISGLQTWTRRMASSGARVTIITAEGQVLADSQADPQTME
Ga0318549_103193391	3300032041	Soil	VRRNLFTKLALAFFALLLGVLIAVDFFAERALRRDYERTGFQQLEAIARIAREIPPQFSALPPSDPREIAALQSWMLHIAAAGVRVTV
Ga0318540_102436332	3300032094	Soil	VRRNLFTKLALFFFGPLVLVLVAVDFFADRALQRDYQRTGFEQLLALSRIAQSNPPDVSSFPPERPEDVSALQTWTRHLAASGVRVTVIAGDGTVLADSQADAQTMEN
Ga0307470_103129092	3300032174	Hardwood Forest Soil	VRRNLFTKLALAFFALLLSVLMVVDFFADRALRRDYERTGFEQLQAIARIAQDNPPQFSALPPTDAQEISALQTWMRHMAASGARVTVVTAEGLVLADSQSE
Ga0307470_106214452	3300032174	Hardwood Forest Soil	VRRNLFTKLALAFFVLLLCVLLAVDFLADRALQRDHQRTGFEQLLAIASIAQSSPPQFAALRPEKPEEISALQNWVQHIAASGARVTVLTAEGLVLA
Ga0307471_1011421611	3300032180	Hardwood Forest Soil	VRRNLFTKLALGFFVLLLCVQVAVDFFADRALQRDYERTGFEQLLAIARIAQSNPPQLNSLPPEKPEEISALQTWMQHIAASGARVTV
Ga0307471_1016836672	3300032180	Hardwood Forest Soil	VRRNLFTKLALAFFVLLLCVLLAVDFLADRALQRDHQRTGFEQLLAIASIAQSSPPQFAALRPEKPEEIS
Ga0307472_1013378031	3300032205	Hardwood Forest Soil	VRRNLFTKLASGFFVLLLCTLLAVDFFTDRALLRDYERAGFEQLLAIARIAQSNPPQLNSLPPEKPEEISALQTWMQHIAASGARVTVV
Ga0310914_109363381	3300033289	Soil	VRRNLFTKLALTCFALLLGVLVAVDFFAERALRRDFERTGFAQLEAIARIAEESPPQFGALPPSDPREIAALESWVRHIGAAGARVTVFTGDGLVSADSQYPAATMTAD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F106022

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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