NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F106060

Metagenome Family F106060

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F106060
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 54 residues
Representative Sequence MANTRVGTLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGY
Number of Associated Samples 9
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 2.00 %
% of genes from short scaffolds (< 2000 bps) 2.00 %
Associated GOLD sequencing projects 6
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (98.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut
(100.000 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(100.000 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 54.90%    β-sheet: 3.92%    Coil/Unstructured: 41.18%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF00884Sulfatase 1.00


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A98.00 %
All OrganismsrootAll Organisms2.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300027904|Ga0209737_10237414All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda1884Open in IMG/M
3300027960|Ga0209627_1037042All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda1089Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut100.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001544Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1Host-AssociatedOpen in IMG/M
3300002125Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4Host-AssociatedOpen in IMG/M
3300002175Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5Host-AssociatedOpen in IMG/M
3300002185Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1Host-AssociatedOpen in IMG/M
3300027558Cubitermes ugandensis crop segment gut microbial communities from Kakamega Forest, Kenya - Cu122C (SPAdes)Host-AssociatedOpen in IMG/M
3300027891Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4 (SPAdes)Host-AssociatedOpen in IMG/M
3300027904Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027960Cubitermes ugandensis midgut segment microbial communities from Kakamega Forest, Kenya - Cu122M (SPAdes)Host-AssociatedOpen in IMG/M
3300027984Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI20163J15578_1005184013300001544Termite GutMITKIFEYTRVGTLIVATIYLQLIKNRYMFRSFAILHCSHQHCVQPVASDVEVVGYF*
JGI20163J15578_1033466113300001544Termite GutMGYYFNTRVGTLIVATIYLQLIQNRYTFRSFTVLHCSHQHCVQPVASDVEVVG
JGI20163J15578_1050922213300001544Termite GutMWNTVPHYAGSVYTRVGTLIVATIYLQLIQNSYTFRSFAVLHCSHQHCVQPVASDVEVVGYL*
JGI20163J15578_1059124613300001544Termite GutMAKITRVGTLIVAAIYLQLIQDRYMLRSFTVLHCSHQHCVQPVASDVEVVGYLEQRLLC
JGI20165J26630_1013404933300002125Termite GutMCKYVQVASMRVGTLIVATIYLQLIQNMYMFQSFTVLHCSHQHCVQPVASDVEVVG
JGI20165J26630_1073908913300002125Termite GutMENPHDLYTDTRVGTLIVAPVYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVE
JGI20166J26741_1019484913300002175Termite GutMRQRVETTRVGSLIVVTIYLQLIQNRYMFRSFTVLHCSHQHCVQP
JGI20166J26741_1025762713300002175Termite GutMMMIIIIVITRVGTLIVATIYLQVIQNRYKFRSFTVLHCSHQHCVQPVASDVEVVG
JGI20166J26741_1137145033300002175Termite GutMENPHDLYTDTRVGTLIVAPVYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDV
JGI20166J26741_1144210793300002175Termite GutMKMESAFVGTVTIFTRVGTLIVATIYLQLTQNRYMFRSFTFLHCSHQHCVQPVASDVEVVGYL
JGI20166J26741_1146226713300002175Termite GutMYVFVYTRVGTLIVANIYLQLIQNRYMFPSFTVLHCSHQHCVQPVASDV
JGI20166J26741_1158855633300002175Termite GutMDLDFQITRVGTLIVATIYLQRMQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGYL
JGI20166J26741_1159892223300002175Termite GutMVHTRVGTLIVATIYLQLTQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGYL
JGI20166J26741_1161473413300002175Termite GutVATIYLQLMENRYMFRSFTVLHCSHQHCVQPVASDVEVVGYL
JGI20166J26741_1172770793300002175Termite GutVATIYLQLVENRYMFRSFTVLHCSHQHCVQPVASDVEVVGYL
JGI20166J26741_1184597613300002175Termite GutMVLLTDVYMRVGTLIVATIFLLLIQNRYRFRSFTVLHCSHQHCVQPVASDVEVVG
JGI20166J26741_1185477463300002175Termite GutMRDEGLRNLQYTRVGTLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGY
JGI20166J26741_1189833223300002175Termite GutMNYGTRVGTLIVATIYLQLIQNRYMFRSVTVLHCSHQHCVQPVASDVEVVG
JGI20166J26741_1191209233300002175Termite GutVATIYEYLQLTQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGYL
JGI20166J26741_1193138123300002175Termite GutMLVKYSFVNTRVGTLIVATIYLQLIKNRYMFRSFTVLHCSHQHCVQPVASDVEVVG
JGI20166J26741_1195126363300002175Termite GutMRVGTLIVATIYLQLMQKRYMFRSFTVLHCSHQHCVQPVASDVEVVGYL
JGI20163J26743_1051506313300002185Termite GutMRVGTLIVATIYLQLIQNRYMSPSFTVLHCSHQHCVQPVASDVEVVG
JGI20163J26743_1099334213300002185Termite GutMYPWHTRVGTLIVATIYLHLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVG
JGI20163J26743_1127606713300002185Termite GutMVGTLIVATIYLQVIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGY
JGI20163J26743_1134280613300002185Termite GutMMMIIIIVITRVGTLIVATIYLQVIQNRYKFRSFTVLHCSHQHCVQPVASDVEVVGY
JGI20163J26743_1138750613300002185Termite GutMGVHDVTRVGTLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEV
JGI20163J26743_1142155423300002185Termite GutMANTRVGTLIVTTIYLQLIQNRYMFRSFTLLHCNHQHCVQPVASD
JGI20163J26743_1142847453300002185Termite GutLVQIYRERVKANTRVGTLIVATIYLQLIQYRYMFRSFTVLHQHCVQPVASDVEVVGYL
JGI20163J26743_1147700913300002185Termite GutMKMEIAFVGTVTIFTRVGTLIVATIYLQLTQNRYMFRSFTFLHCSHQHCVQPVASDVEVVGYL
Ga0209531_1020292013300027558Termite GutMANTRVGTLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGY
Ga0209531_1029972613300027558Termite GutMVPLTDVYTRVGTLIVATINLQLIQNRYMIRSFTILHCSHQHCVQPVASDVEVVGYL
Ga0209628_1002827633300027891Termite GutMSSLIVNTRVGTLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGYL
Ga0209628_1004502013300027891Termite GutMRVETLTVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGYL
Ga0209628_1007335453300027891Termite GutMSIVPARVGTLIVATIYLQLIQNRYMFRSFTVLHCSHQHCLQPVASDMEVVG
Ga0209628_1007843023300027891Termite GutMYICHYTGDYTRVGTLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEV
Ga0209628_1011567813300027891Termite GutMYYIYTRVGTLIVATIYLQLIQNRYVFRSFIVLQCSYQHCVQPVASDVEVVGHL
Ga0209628_1013066423300027891Termite GutMNNKENTRVETLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEV
Ga0209628_1017153333300027891Termite GutMEISRSSEALVNTRVGTLIVATIYLQLIQNRYMFRSFTVLHCSHQHRVQPVASDV
Ga0209628_1020850113300027891Termite GutMPAYTRVGTLIVATVYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVE
Ga0209628_1022143623300027891Termite GutMQYTRVGTLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGYL
Ga0209628_1022645823300027891Termite GutMVPLTDVYTRVGTLVVATIYLQLIQNRYMFPSFTVLHCSHQHCVQPVASDV
Ga0209628_1026975733300027891Termite GutMAGTLTVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGY
Ga0209628_1030618213300027891Termite GutMFTRVGTLIVVTIYLQLIQNRYMFRSFTVLHCSHQHCVQPVVSDVE
Ga0209628_1034521213300027891Termite GutMMMIIIIVITRVGTLIVATIYLQVIQNRYKFRSFTVLHCSHQHCVQPVASDVEVVGYL
Ga0209628_1058142413300027891Termite GutMGLKGCPETSEDTRVGILIVATIYLQLIQNRYMFRSFTVLHCSHQYCVQPVASDVEVV
Ga0209628_1062098313300027891Termite GutMLLYGKRKQNEVFDTNTRVGTLILATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGYL
Ga0209628_1062370313300027891Termite GutMVLLTDVYNRVGTLIEATIYLQLIQNRYMFRSFTVHHCSHQHCVQPVASDVEVVG
Ga0209628_1072655313300027891Termite GutMLELTAQYTRVETLIVATIYLQLIPNRYMFRSFTVLHCSHQHCVQPVASDVEVVGYL
Ga0209628_1085913413300027891Termite GutMANTRVGTLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQSLASDVEVVGYL
Ga0209628_1134800413300027891Termite GutMVGIWLNMCGMLLHITRVVTLIGATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEV
Ga0209628_1138436213300027891Termite GutMDNNTVYFMSSYTRVGTLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVV
Ga0209737_1002090743300027904Termite GutMVSIRLLLCDAMRVGTLILANIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGYL
Ga0209737_1004433713300027904Termite GutMITKIFEYTRVGTLIVATIYLQLIKNRYMFRSFAILHCSHQHCVQPVASDVEVVGYF
Ga0209737_1006166413300027904Termite GutMRVGTLIVATIYLQLMQKRYMFRSFTVLHCSHQHCVQPVASDVEVVGY
Ga0209737_1006436043300027904Termite GutMRTLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGYL
Ga0209737_1010624913300027904Termite GutMRTTRLTRVGTLIVATIYLQLIQNRYKFRSFTVLHCSHQHCVQPVASDVEVVGHL
Ga0209737_1020193013300027904Termite GutMANTRVGTLIVATIYLQLIQNRYMFRSFTVLQCSHQHCVQPVA
Ga0209737_1023741413300027904Termite GutMRVGTLIVATIYLQLIQKRYMFRSFTVLHCSHQHYVQPVASDAEVVG
Ga0209737_1024511723300027904Termite GutMRVETLTVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGY
Ga0209737_1026231013300027904Termite GutMRVRIHTRVGTLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVVSDVEVVGYL
Ga0209737_1039025913300027904Termite GutMFVIPMCLSNTRVGTLIVATIYLQLMQNRYVFRSFTVLHCSHQHCVQPVASDVEVVGYL
Ga0209737_1050584413300027904Termite GutMLIEYQNPDIMRVGTLIVATVYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGYL
Ga0209737_1053280023300027904Termite GutMLFGLNFMGYYFNTRVGTLIVATIYLQLIQNRYTFRSFTVLHCSHQHCVQPVASDVEVVGYL
Ga0209737_1054489013300027904Termite GutMNNSYIHTRVGTLIVTTIYLQLIKNRYMFRSFTVLHCSHQHCVQPVAS
Ga0209737_1056716723300027904Termite GutVFLGQGAQCQYTRVGTLIVATIYLQLTQNRYTFRSFTVLHCSHQHCVQPVASDVEVVGY
Ga0209737_1082038123300027904Termite GutMWDLINLMRLAGVNTSVGTLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGYL
Ga0209737_1083273413300027904Termite GutMVPLTDVYTRVVTLIVATVYLQLIQNRYMFRSFTVLHCSHQHCVQPVANDVEVVGYL
Ga0209627_103704213300027960Termite GutRVGTLIVATIYLQLIQNRYGFRSFTVLHCSHQHCVQPVASDVEVVGYL
Ga0209629_1002411233300027984Termite GutMLEKFNLKSHYTRVGTLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGYL
Ga0209629_1003166513300027984Termite GutMVPLTDVYTRFGILIVATIYLQLIQNRYMIRSFTVLHCSHQHCVQPVVSDVEV
Ga0209629_1005300653300027984Termite GutMYVYVHTFVHKRVGTLIVANIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVV
Ga0209629_1008224213300027984Termite GutMYHFTTRVGTLIVATIYLQLIQNSYMFRSFTVLHCSHQHCVQPVASDVEVVGYL
Ga0209629_1011314233300027984Termite GutMTGTSHEDLSTRVGTLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGYL
Ga0209629_1014609913300027984Termite GutMNCLIIEDCNTRVGTLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVACDVEVV
Ga0209629_1016976813300027984Termite GutMAYVIGAHKQHTRVGTLIVATIYLQLIQNRYKFRSFTVLHCSHQHCVQPVASDVEVVGYL
Ga0209629_1017042813300027984Termite GutMANTRVGTLIVATIYLQLIQNRYMFRSFTVLQCSHQHCVQPV
Ga0209629_1020834513300027984Termite GutMILCRHNTTYTRVGTLIVATTYLQMIQNRYMFRSFTVLHCSHQHCVQPVASDV
Ga0209629_1021636123300027984Termite GutMENPHDLYTDTRVGTLIVAPVYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVV
Ga0209629_1022974923300027984Termite GutMRQRVETTRVGSLIVVTIYLQLIQNRYMFRSFTVLHCSHQHCVQPVVSDVEV
Ga0209629_1023198813300027984Termite GutMNCTRVGTLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASD
Ga0209629_1024304113300027984Termite GutMAITYAAWIERTTRVGTLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGY
Ga0209629_1024571713300027984Termite GutVGYTRVGTLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQSVASDVEV
Ga0209629_1026486323300027984Termite GutVYVSDFSTRVGTLILATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGYL
Ga0209629_1026591723300027984Termite GutMSGFNSTPIITRVETLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVV
Ga0209629_1029994313300027984Termite GutMYVHMYVCVYVCTRVGTLIVATIYLRLIQNRYMFRSFTVLHCSHQHCVQPVVSDVEVVGY
Ga0209629_1030304513300027984Termite GutMYSVQCVYQDTHIISLFEYTRVGTLILATIYLQLIQNRYMFRSFTVLQCSHQHCVQPVASDVEVVGYL
Ga0209629_1031686613300027984Termite GutVEAIPLCDKIEVYTRVGTLIVATIYLQLIQNRYIFRSFTVLHCSHQHCVQPVASDVEVVGYL
Ga0209629_1032902123300027984Termite GutMRVGTLIEATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGYL
Ga0209629_1045723923300027984Termite GutVCAYGSCHEGNTRVGTLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVG
Ga0209629_1047389513300027984Termite GutMENAPENGKELLNSAHTRVGTLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGYL
Ga0209629_1053838113300027984Termite GutVKYVVLQLCTRVGTLRVATVYLQLIQNRYMFRSFTVLHCSHQHCVQPVASD
Ga0209629_1062142813300027984Termite GutMVLLTDVYMRVGTLIVATIFLLLIQNRYRFRSFTVLHCSHQHCVQPVASDVEVVGY
Ga0209629_1062674213300027984Termite GutMRVGTLVVANIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGY
Ga0209629_1067136413300027984Termite GutMEMVVFRKVTSNTRVGTLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVEVVGY
Ga0209629_1070662713300027984Termite GutMGFNSAFKGLIVATIYLQLIQNRYMFRSFTVLHCSHQHCVQPVASDVKVVG
Ga0209629_1071530513300027984Termite GutMSFNYHPNAHTRVGTLIVATIYLQLIQNKYMFRSFTVLHCSHQHCVQPVASDVEVVGY
Ga0209629_1078637213300027984Termite GutMANTRVGTLIVATIYLQLIQNRYMFRRFTVLQCSHQHCVQPVASD
Ga0209629_1078772913300027984Termite GutMQITTRVGTLIVATIYLQLKQNRYMIRSFIVLHCSHQHCVQPVASDVEVVGHL
Ga0209629_1079372913300027984Termite GutMYEYNEITRVGTLIVATIYLQLIQNRYVFRSFTVLHCSHQHCVQPVASDVEVVGYL
Ga0209629_1086864513300027984Termite GutVYGVAKGYCTRVETLIVATIYLQLIQNRYMFRSFTVVHCSHQHCVQPVASDVEVVGY

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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