NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F106067

Metagenome Family F106067

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F106067
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 55 residues
Representative Sequence VSDFGRLRSYDRFLIPVHALVXTAFTEPAGGIMNSASLVASSRYLDTWEECREG
Number of Associated Samples 11
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 3.00 %
% of genes from short scaffolds (< 2000 bps) 2.00 %
Associated GOLD sequencing projects 6
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (98.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut
(100.000 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(100.000 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 51.85%    β-sheet: 0.00%    Coil/Unstructured: 48.15%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF01359Transposase_1 2.00


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A98.00 %
All OrganismsrootAll Organisms2.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002185|JGI20163J26743_10419599Not Available528Open in IMG/M
3300002185|JGI20163J26743_11051038Not Available870Open in IMG/M
3300027904|Ga0209737_10137578All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera2435Open in IMG/M
3300027984|Ga0209629_10085816All Organisms → cellular organisms → Eukaryota → Opisthokonta3148Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut100.00%

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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001474Cubitermes ugandensis crop segment gut microbial communities from Kakamega Forest, Kenya - Cu122CHost-AssociatedOpen in IMG/M
3300001544Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1Host-AssociatedOpen in IMG/M
3300002125Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4Host-AssociatedOpen in IMG/M
3300002127Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3Host-AssociatedOpen in IMG/M
3300002175Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5Host-AssociatedOpen in IMG/M
3300002185Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1Host-AssociatedOpen in IMG/M
3300027558Cubitermes ugandensis crop segment gut microbial communities from Kakamega Forest, Kenya - Cu122C (SPAdes)Host-AssociatedOpen in IMG/M
3300027891Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4 (SPAdes)Host-AssociatedOpen in IMG/M
3300027904Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027960Cubitermes ugandensis midgut segment microbial communities from Kakamega Forest, Kenya - Cu122M (SPAdes)Host-AssociatedOpen in IMG/M
3300027984Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI20161J15289_100674613300001474Termite GutMCDSKQKSSYKHVSDFRRLRIYGHFLIPVHALM*TAFTEPAGGIMNSASLVASTRYLDCGEGGVS*
JGI20163J15578_1005440313300001544Termite GutMCDSKQKISYKYVSDFRRLRSYGRFLIPVHALM*TAFTEPAGGIMNSVNLLSSTRYLDTWEE
JGI20163J15578_1018706813300001544Termite GutMKKSSYKHVSDFGRLRSYDRFLIPVHALV*TAFTEPAGGIMNSASLVASSRYLDTWEECREGGVS*
JGI20163J15578_1040740813300001544Termite GutVSDFGRLRSYNRFLIPAHALV*TAFTEPAGGIMDSASLVVSSRYLDTWEECREG
JGI20163J15578_1043301313300001544Termite GutMCDSKQKSSYKHVSDFRRLRIYGHFLIPLHALM*TAFTEPAGGIMNSASLVASTRYLDCGEG
JGI20163J15578_1046504913300001544Termite GutVSDFRRLRIYGHFLIPVHALM*TAFKVPAGGIMNSASLVASTRYLD
JGI20163J15578_1053897713300001544Termite GutVSDFGRLPSYDRFLIPVHALV*TAFTEPAGGIMNSASLVASSRYLDTWEECREGGVSWCAVLDAQFT
JGI20163J15578_1056205313300001544Termite GutVSDFGRLRSYDCFLIPVHALV*TAFTEPAGGIMNSASLVASSRYL
JGI20163J15578_1058560213300001544Termite GutMCPILDGSYDRFLIPVHALV*TAFTEPAGGVMNSVSLVASSRYLDTWEEFREGGVS
JGI20163J15578_1068801613300001544Termite GutVSDFGRLXSYDXFLIPVHALV*TAFTEPAGGIMKSASLVASSRYLDTW
JGI20163J15578_1076687623300001544Termite GutMIVCVIHALM*TAFTEPAGEIMNSASLVANTRYLDCGEGGVS*
JGI20163J15578_1086835613300001544Termite GutVCDFGQLQSYDRFLIPVHALV*TAFTEPAGGIMNSASLVASSRYLNTWEEYREGGVS*
JGI20165J26630_1012799523300002125Termite GutMCDSKQKISYKYVSDFRRLRSYGRFLIPVHALM*TAFTEPAGGIMNSVNLLSSTRYLDTWEECGEGGVS*
JGI20165J26630_1019809613300002125Termite GutVSDFGRLRSYDRFLIPVHALV*TAFKGPAGGIINSASLVASSRY
JGI20165J26630_1044045613300002125Termite GutVSDFRRLRIYGHFLIPVHAVM*TAFTEAAGGIMNSASLVASTHNLDYGEGGVS*
JGI20164J26629_1022337423300002127Termite GutVSDFGRLRXYXHFLIPVHALVLTAFTEPAGGIMNSASLVASSRYLDTWEEFGERWGELVCSSG
JGI20166J26741_1000607113300002175Termite GutVSDFRRLRSYDRSLIPVHALV*TAFTEPAGGIMNSASLVASSRYLDTWEECREGGVS
JGI20166J26741_1007399223300002175Termite GutMKKSSYKYVSDFGRLRSYDRFLIPAHALV*TVFTEPAGGIMNSASLVASSRYLDTWEEFREGGLS
JGI20166J26741_1013808523300002175Termite GutVSDFGRLRSYDRFLIPVHALV*TAFTEPAGGIINSASLVASSRYLDTWEECREGGVS*
JGI20166J26741_1153664313300002175Termite GutVSDSGRLRSYDRFLIPVHALV*TAFTEPAGGIMNSASLVASSRYLDTWEECREGGVS*
JGI20166J26741_1159122613300002175Termite GutVSDFGRLWSYDRFLIPVHDLV*TAYTKPAGGIMNSASLVASSRYLDTWEECREGGVS*
JGI20166J26741_1159818613300002175Termite GutVSDFGLLRSYDRFLIPVHALV*TAFTEPAGGIMNSASLVASLRYLD
JGI20166J26741_1173560033300002175Termite GutVSDFGRLRIYDGFLIPVHALV*TAFTEPAGGILNSASLVASSRYLDTWEECREGGLS*
JGI20166J26741_1174854513300002175Termite GutVSDFGRLRSYDRFLIPVHAVV*TAFTEPAGVIMNSASLVASSRYLDTWEEFREGGMS*
JGI20166J26741_1181296913300002175Termite GutVSDFRRLRIYGHFLIPVHALM*TAFKVPAGGIMNSASLVASTRYLDCGEGGVS*
JGI20166J26741_1188557713300002175Termite GutSKQKSSYKHVSDFRRLRIYGHFLIPVHALM*TAFMEPAGGIMNSASLVASTRYLDCGEGGVS*
JGI20166J26741_1189622313300002175Termite GutMKHVSDFGRLRSYDRFLIPVHAVV*TAFTEPAGRIMNSASFVASSRYLDTWEECREGGVS
JGI20166J26741_1193695813300002175Termite GutVSYFRRLRIYEHFLISIHTLM*TAFTEPAGGIMNSASLVASTRYLDCGEGG
JGI20166J26741_1197789813300002175Termite GutVSDFGRLQSYNRFLIPVHALV*TAFTQPAGGIMNSASLVASSRYLDTREECREGGVS*
JGI20166J26741_1203586513300002175Termite GutVSDFGRLRSYDRFLILVHALV*TAFTERAGGIMKSASLVASSRYLDAWEECREGGVS*
JGI20163J26743_1041959913300002185Termite GutTAGGDFLGLCDEKSSYKHVSDFGRLRSYDRFLIPVHALV*TAFTEPAGGIMNSASLVASSLYLDTWEECREGGVS*
JGI20163J26743_1043184313300002185Termite GutMKKSSYKYVSDFGRLRSYDRFLIPAHALV*TVFTEPAGGIMNSASLVASSRYLDTWEEFREGGLSWCAVL
JGI20163J26743_1046342613300002185Termite GutVSDFRRLRIYGNFLIPVHAFM*TAFTEPAGGIMNSSSLVASTRYLDCGEGG
JGI20163J26743_1083607323300002185Termite GutVSDFGRLRSYDRFLNPVHALV*TAFTVPAGGIMNSASLVASSRYLDTW
JGI20163J26743_1088358313300002185Termite GutVSDFGRLGSYDRFLIPVHALE*TAFTEPAGGIMNSASLVASSRYLDTWEECREGGVS*
JGI20163J26743_1093693713300002185Termite GutVSDFGRLLIYDRFLIPVHGLV*TAFMEPAGGIMNSASLVASSRYLDTWEECR
JGI20163J26743_1100229713300002185Termite GutVSDFRRLRIYGHFLIPVHALM*TAFKVPAGGIMNSASLVASTRYLDCGEGGV
JGI20163J26743_1102677413300002185Termite GutVSDFGRLRSYDRLLIPVHALV*TAFTEPAGGIMNSASLVASSRYLD
JGI20163J26743_1105103833300002185Termite GutDSKQKSSYKHVSDFRRLRIYGHFLIPVHALM*TAFMEPAGGIMNSASLVASTRYLDCGEGGVS*
JGI20163J26743_1105465223300002185Termite GutVSDFGQLRSYDRSLIPVHALV*TAFAGGIMNSASLVASSRYLNTWEEFRE
Ga0209531_1007113613300027558Termite GutVSDFGRLRIYGHFLIPVHALMXTTFTEPAGGIMNSASLVASTRYLDCGEGEVS
Ga0209531_1014498713300027558Termite GutVSDFGRLRSYDRFLIPVQALVXTAFTEPAGGIMNSASLVASSRYLDTWEE
Ga0209531_1015325513300027558Termite GutVSDFGRLRSYDRLLIPVHALVXTVFTEPAGGIMNSASLVASSRYLDSW
Ga0209628_1002798613300027891Termite GutVSDFGRLRRYDRFLIPVDALVXTAFTEPAGGIMNSASLVASLCYLDTWEECREGGVS
Ga0209628_1011022913300027891Termite GutVSDFGRLRSYDRLLIPVHALVXTAFTEPAGGIMNSASLVASSRYLDTWEECREG
Ga0209628_1011719933300027891Termite GutVSDFGRLWSHDRFLIPVHTLVXTVFTEPAGGIMISASLVASSRYLDTGGMPGR
Ga0209628_1015764313300027891Termite GutMCDSKQKISYKYVSDFRRLRSYGRFLIPVHALMXTAFTEPAGGIMNSVNLLSSTRYLDTWEECGEGGVS
Ga0209628_1025047023300027891Termite GutMKKVHINRSDFGRLRSYDRFLIPVHALVXTAFTEPAGGIMNSASLVASSRYLDTWVECREGGVS
Ga0209628_1042193323300027891Termite GutVSDFRRLRIYGHILIPVHALMXTAFTEPAGGIINSASLVAST
Ga0209628_1042405813300027891Termite GutVSDFGRLRSYDRFLIPVQALVXTAFTEPAGGIMNSASLVASSRYLDTWEECWEGGVS
Ga0209628_1047398213300027891Termite GutMCDSKQKSSYKHVSDFRRLRIYGHFLIPVPALMXTAFTESAGGIMNSASLVASTRYLDCGEGGVS
Ga0209628_1052319443300027891Termite GutVSDFGRLRSYDRFLIPVHALVXTAFTVPAGGIMNSASLVASSRYLDTWEEC
Ga0209628_1061599413300027891Termite GutVSDFGRLRSYNRFLIPAHALVXTAFTEPAGGIMDSASLVVSSRYLDTWEECREGGVS
Ga0209628_1086336413300027891Termite GutVSDFGRLWSYDRFLIPVHDLVXTAYTKPAGGIMNSASLVASSRYLDTWEECREGGVS
Ga0209628_1087639823300027891Termite GutVSDFGRLWSYDRFLIPVHALVXTAFTEPAGGIMNSASLVASSCYLDTWE
Ga0209628_1089580013300027891Termite GutVSDFGQLRSYDHFLIPVHALVXTAFTEPAGGIMNSASLVASSRYLDTREQCREG
Ga0209628_1094448513300027891Termite GutVSDFGRLQSYNRFLIPVHALVXTAFTQPAGGIMNSASLVASSRYLDTREECREGGVS
Ga0209628_1105309913300027891Termite GutVSDFRRLRIYGHFLIPVHALMXTAFTEPAGGIMNSASLVASTRYLDCGEGGVS
Ga0209628_1110155923300027891Termite GutVSDFGRFRSYDRFLIPVHALVXTAFTEPAGRIMNSASLVASSRYLDTWEECREGG
Ga0209628_1117677713300027891Termite GutIYGHFLIPVHALMXTAFMEPAGGIMNSASLVASTRYLDCGEGGVS
Ga0209628_1123014513300027891Termite GutVSDFGRLRSYDRFLIPVHALVXTAFTEPAGGIMNSAILVASSRYLDTWK
Ga0209628_1147862613300027891Termite GutVSDFGRLHSYDRFLIHVHTLVXTAFTEPAGGIMNSASLVTS
Ga0209628_1148190813300027891Termite GutVSDFGRLWSYDRFLIPVHGLVXTAFTEPAGGIMNSASLVASSRYLDTWEEC
Ga0209737_1002411013300027904Termite GutVSDFGQLRSYDRFLIPVHALVXTAFTEPAGGIMNSASLVTSSRYLDTWEECRDGGV
Ga0209737_1012990253300027904Termite GutMCDSKQKSSYKHVSDFRQLRSYGHFLIPVHALMRTAFTEPAGRIMNSASLVASTRYLDTWEECGEGGVS
Ga0209737_1013757843300027904Termite GutVSDFGRLRSYDRFLIPIHALVXTAFMEPAGAIMNSASLVTSSHYLDTRVGCREGGV
Ga0209737_1019187413300027904Termite GutVSDFGRLRSYDRFLIPVHALVXTAFTEPAGGIMNSASLVASSRYLDTWEECREG
Ga0209737_1022666013300027904Termite GutVSDFGRLRSYERFLIPVHALVXTAFTEPAGGIMNSASLVASSRYLDTW
Ga0209737_1027105513300027904Termite GutVSDFGRLRSYDRFLIPVHALEXTAFTEPAGGIMNSASLVASSRYLDTWEEFREGG
Ga0209737_1028557333300027904Termite GutVSDFGRLRSYDRSLIPVHALVXTAFTEPAGGIMNSASLVASLRYL
Ga0209737_1038237113300027904Termite GutVSDFGRLRSYYRFLIPVHALVXTACTEPAGGIMNSASLVASSRYLGTW
Ga0209737_1047013623300027904Termite GutVSDFXRLRSYNRFLIPVHAVVXTAFTEPAGGIMNSASLVASSRYLDT
Ga0209737_1056019423300027904Termite GutVSDFGRLRSYNRFLIPVHAVXTVFTEPAGGIMNSASLVASSRYLDT
Ga0209737_1059276213300027904Termite GutMTNKVGIQSVSPLQGITARGDFLGLCDEKSSHKYVSDFGRLRSYDRFLIPVHALVXTAFTEPAGGIMNSASLVASSRYLDTWVECREGG
Ga0209737_1062718113300027904Termite GutVSDFGRLRSYDRFIIPVHALVXTAFTEPAGGIMNSASLVA
Ga0209737_1074416013300027904Termite GutVSDFRRLRIYGHFLIPVHAVMXTAFTEAAGGIMNSASLVASTHNLD
Ga0209737_1084402013300027904Termite GutVSDLGRLRSYDRFLIHVHALVXTAFTEPAGGIMNSASLVASSRYLDTWEECRE
Ga0209737_1097272513300027904Termite GutVSDFGRLRSYDRFLIPVHAVVXTAFTEPAGVIMNSASLVASSRYLDTWEEFREGGM
Ga0209737_1103861913300027904Termite GutVSDFERLRSYDRFLIPVHALVXTAFMEPAGGIMNSASLVASSRYLDTWEECREGGVS
Ga0209737_1116489023300027904Termite GutVSDFGRLRSYDSFLIPVHALVXTAFKEPAGGIMNSASLVAISRYLDTWD
Ga0209627_108799313300027960Termite GutMSDFGRLRNYDRFLIPIHALVXTAFTEPAGGIMNSASLVASSRYLDTWVECREGG
Ga0209627_115932413300027960Termite GutVSDFERLRSYDRFLIPVHALVXTAFMEPAGGIMNSASLV
Ga0209629_1007879833300027984Termite GutRLRSYDRFLIPVHALVXTAFTEPAGGIMNSASLIASSRYLDTWEECREGGVS
Ga0209629_1008581653300027984Termite GutVSDFGRLWSYDRFLIPVHALVXTTFMEPAGRIMNSASLVASSRYLDTWEECQEGGVS
Ga0209629_1010152613300027984Termite GutVSDFGRLRSYDRFLIPVHALVXTAFTEPAGGIMNSAILVASSRYLDTWEECR
Ga0209629_1015913023300027984Termite GutMCDYKQKSSYKHVSDFRRLRTYGHFLIPVHALMXTAFTEPAGGIMNSASLVASTRYLDCG
Ga0209629_1017984523300027984Termite GutVSDFGRLRSYDRLLIPVHALVXTAFTEPAGGIMNSASLVASSRYLDTWEECLEG
Ga0209629_1018499313300027984Termite GutGDFLGLCDEKSSYKHVSDFGRLRSYDRFLIPIHALVXTAFMEPAGAIMNSASLVTSSHYLDTRVGCREGGVS
Ga0209629_1025155323300027984Termite GutVSDFGRLRSYDRFLIPVHALLXTAFTEPAGGIMNSASLVASSRYLDTWEECREGGV
Ga0209629_1031308613300027984Termite GutVSDFGWLRSHDHFLIPIHALVXTAFTEPAGGIMNSAGLVASSRYLDTCEGCWE
Ga0209629_1034325013300027984Termite GutVSDSGRLRSYDRFLIPVHALVXTAFTEPAGGIMNSASLVASSRYLDTWEECREGGVS
Ga0209629_1036647013300027984Termite GutVSDFGRLRSYDRFLIPAHALVXTAFTEPAGEIMNSASLVASSRYLDTWEE
Ga0209629_1049287533300027984Termite GutMKHVSDFGRLRSYDRFLIPVHAVVXTAFTEPAGGIMNSASLVA
Ga0209629_1060221723300027984Termite GutVSDFGRLRSYGHFLIPVHALMXTAFTEPAGGIMNSASL
Ga0209629_1061113313300027984Termite GutMIVCVILSKKGSFKHVSDFRRLRINGHFLIPVHALMXTAFTEPAGGIMNSASLVASTPYLDCGEGGVS
Ga0209629_1061520513300027984Termite GutVSDFGPLRRYDRFLILVHALVXTAFTVPAGGIMNSASLVTSSRYLDTXDECREG
Ga0209629_1061556413300027984Termite GutTSGNDSMCDSKQKSSYKHVSDFRRLRIYGHFLIPVHALMXTAFMEPAGGIMNSASLVASTRYLDCGEGGVS
Ga0209629_1062204713300027984Termite GutMCPDFGRLRSYDRFLIPVHALVXTAFTEPAGGIMNSASLVASSHYLDTWG
Ga0209629_1096732513300027984Termite GutMKKSSYKYVSDFGRLRSYDRFLIPAHALVXTVFTEPAGGIMNSASLVASSRYLDTWEEFREGGLSW
Ga0209629_1099666413300027984Termite GutMCDSKQKISYKHVSDFRRLRIYGHFLIPVHALMXTAFMEPAGRIMNSASLVASTGYLDCGEG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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