Scaffold EFn_FTWC1V109FUKD4

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold EFn_FTWC1V109FUKD4

Scaffold EFn_FTWC1V109FUKD4

Overview

Basic Information
Taxon OID	2027040001 Open in IMG/M
Scaffold ID	EFn_FTWC1V109FUKD4 Open in IMG/M
Source Dataset Name	Viral communities in wastewater treatment process (EF-no assembly)
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	University of Illinois, Urbana-Champaign
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	527
Total Scaffold Genes	1 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Activated Sludge → Wastewater → Wastewater Viral Communities From Wastewater Treatment Facility In Singapore

Source Dataset Sampling Location
Location Name	Singapore: Singapore
Coordinates	Lat. (^o)	1.332	Long. (^o)	103.756	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F105151	Metagenome / Metatranscriptome	100	Y

Sequences

Protein ID	Family	RBS	Sequence
EF_na_584820	F105151	N/A	MLSEFITKNFGKDADPRVFLPLLKKVAASYVGNSAMKYVQYCEDMLNINIMDVLNNYDKVKEDLKKYNRDKNSELIQALKEMDLNKLGDKQVANAAQFLKTVGEDELTAYLLFILDNNLDIAKPKIKAFMLEFEQVLRTIKKINKPGSK

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